LEPRE1 15312

Name: LEPRE1	Sequence: fasta or formatted (697aa)		NCBI GI: 226371643
Description: leprecan 1 isoform 2		Referenced in: Collagen
Other entries for this name: alt prot [736aa] leprecan 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.9 69 3 C cysteine 2.2 15 1 D aspartate 4.4 31 2 E glutamate 9.2 64 2 F phenylalanine 4.4 31 2 G glycine 5.9 41 2 H histidine 2.4 17 1 I isoleucine 2.4 17 1 K lysine 4.0 28 1 L leucine 10.0 70 2 M methionine 2.0 14 1 N asparagine 3.6 25 1 P proline 4.9 34 2 Q glutamine 4.7 33 2 R arginine 6.6 46 2 S serine 5.6 39 2 T threonine 5.0 35 2 V valine 6.5 45 2 W tryptophan 0.9 6 1 Y tyrosine 5.3 37 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 leprecan 1 isoform 2 LEPRE1 0.984 leprecan 1 isoform 1 LEPREL1 0.453 leprecan-like 1 isoform a LEPREL2 0.378 leprecan-like 2 LEPREL1 0.364 leprecan-like 1 isoform b CRTAP 0.136 cartilage associated protein precursor SC65 0.117 synaptonemal complex protein SC65 LOC100134403 0.036 PREDICTED: similar to cartilage associated protein ... C17orf101 0.023 hypothetical protein LOC79701 isoform 1 P4HA3 0.009 prolyl 4-hydroxylase, alpha III subunit precursor [H... NOP14 0.007 probable nucleolar complex protein 14 EGLN1 0.007 egl nine homolog 1 RBBP6 0.006 retinoblastoma-binding protein 6 isoform 2 RBBP6 0.006 retinoblastoma-binding protein 6 isoform 1 RTN4 0.005 reticulon 4 isoform E RTN4 0.005 reticulon 4 isoform A EP400 0.005 E1A binding protein p400 C1orf173 0.005 hypothetical protein LOC127254 EGLN2 0.004 EGL nine (C.elegans) homolog 2 EGLN2 0.004 EGL nine (C.elegans) homolog 2 P4HA1 0.004 prolyl 4-hydroxylase, alpha I subunit isoform 1 prec... P4HA1 0.004 prolyl 4-hydroxylase, alpha I subunit isoform 3 pre... P4HA1 0.004 prolyl 4-hydroxylase, alpha I subunit isoform 2 pre... P4HA1 0.004 prolyl 4-hydroxylase, alpha I subunit isoform 2 prec... EGLN3 0.004 egl nine homolog 3 EIF4ENIF1 0.004 eukaryotic translation initiation factor 4E nuclear i... C7orf58 0.004 hypothetical protein LOC79974 isoform 2 C7orf58 0.004 hypothetical protein LOC79974 isoform 1 DBF4 0.004 activator of S phase kinase INO80B 0.004 high mobility group AT-hook 1-like 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.