Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 5453700
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5453700 interferon regulatory factor 6 [Homo sapiens]
(467 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5453700 interferon regulatory factor 6 [Homo sapiens] 977 0.0
gi|148833515 interferon regulatory factor 5 isoform c [Homo sapi... 454 e-128
gi|148833492 interferon regulatory factor 5 isoform c [Homo sapi... 454 e-128
gi|148833488 interferon regulatory factor 5 isoform c [Homo sapi... 454 e-128
gi|148833496 interferon regulatory factor 5 isoform b [Homo sapi... 450 e-126
gi|14249182 interferon regulatory factor 5 isoform b [Homo sapiens] 450 e-126
gi|4504727 interferon regulatory factor 5 isoform a [Homo sapiens] 450 e-126
gi|148833494 interferon regulatory factor 5 isoform d [Homo sapi... 446 e-125
gi|167555104 interferon regulatory factor 4 [Homo sapiens] 224 2e-58
gi|4504567 interferon regulatory factor 8 [Homo sapiens] 206 4e-53
gi|25282407 interferon-stimulated transcription factor 3, gamma ... 163 4e-40
gi|4504725 interferon regulatory factor 3 [Homo sapiens] 160 2e-39
gi|4809284 interferon regulatory factor 7 isoform b [Homo sapiens] 150 2e-36
gi|4758610 interferon regulatory factor 7 isoform a [Homo sapiens] 149 7e-36
gi|98985819 interferon regulatory factor 7 isoform d [Homo sapiens] 147 2e-35
gi|153082752 interferon regulatory factor 2 [Homo sapiens] 115 6e-26
gi|4504721 interferon regulatory factor 1 [Homo sapiens] 106 5e-23
gi|239757474 PREDICTED: similar to hCG1785205 [Homo sapiens] 47 4e-05
gi|239751984 PREDICTED: similar to hCG1785205 [Homo sapiens] 47 4e-05
gi|239746471 PREDICTED: hypothetical protein XP_002343764 [Homo ... 47 4e-05
gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens] 36 0.065
gi|5803229 kaiso [Homo sapiens] 36 0.085
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 34 0.25
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 33 0.55
gi|7661690 coiled-coil domain containing 9 [Homo sapiens] 33 0.55
gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens] 32 0.94
gi|226437579 NAC alpha domain containing [Homo sapiens] 32 1.2
gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens] 32 1.2
gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens] 32 1.2
gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens] 32 1.2
>gi|5453700 interferon regulatory factor 6 [Homo sapiens]
Length = 467
Score = 977 bits (2526), Expect = 0.0
Identities = 467/467 (100%), Positives = 467/467 (100%)
Query: 1 MALHPRRVRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAW 60
MALHPRRVRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAW
Sbjct: 1 MALHPRRVRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAW 60
Query: 61 AVETGKYQEGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDIPQPQ 120
AVETGKYQEGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDIPQPQ
Sbjct: 61 AVETGKYQEGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDIPQPQ 120
Query: 121 GSIINPGSTGSAPWDEKDNDVDEEDEEDELDQSQHHVPIQDTFPFLNINGSPMAPASVGN 180
GSIINPGSTGSAPWDEKDNDVDEEDEEDELDQSQHHVPIQDTFPFLNINGSPMAPASVGN
Sbjct: 121 GSIINPGSTGSAPWDEKDNDVDEEDEEDELDQSQHHVPIQDTFPFLNINGSPMAPASVGN 180
Query: 181 CSVGNCSPEAVWPKTEPLEMEVPQAPIQPFYSSPELWISSLPMTDLDIKFQYRGKEYGQT 240
CSVGNCSPEAVWPKTEPLEMEVPQAPIQPFYSSPELWISSLPMTDLDIKFQYRGKEYGQT
Sbjct: 181 CSVGNCSPEAVWPKTEPLEMEVPQAPIQPFYSSPELWISSLPMTDLDIKFQYRGKEYGQT 240
Query: 241 MTVSNPQGCRLFYGDLGPMPDQEELFGPVSLEQVKFPGPEHITNEKQKLFTSKLLDVMDR 300
MTVSNPQGCRLFYGDLGPMPDQEELFGPVSLEQVKFPGPEHITNEKQKLFTSKLLDVMDR
Sbjct: 241 MTVSNPQGCRLFYGDLGPMPDQEELFGPVSLEQVKFPGPEHITNEKQKLFTSKLLDVMDR 300
Query: 301 GLILEVSGHAIYAIRLCQCKVYWSGPCAPSLVAPNLIERQKKVKLFCLETFLSDLIAHQK 360
GLILEVSGHAIYAIRLCQCKVYWSGPCAPSLVAPNLIERQKKVKLFCLETFLSDLIAHQK
Sbjct: 301 GLILEVSGHAIYAIRLCQCKVYWSGPCAPSLVAPNLIERQKKVKLFCLETFLSDLIAHQK 360
Query: 361 GQIEKQPPFEIYLCFGEEWPDGKPLERKLILVQVIPVVARMIYEMFSGDFTRSFDSGSVR 420
GQIEKQPPFEIYLCFGEEWPDGKPLERKLILVQVIPVVARMIYEMFSGDFTRSFDSGSVR
Sbjct: 361 GQIEKQPPFEIYLCFGEEWPDGKPLERKLILVQVIPVVARMIYEMFSGDFTRSFDSGSVR 420
Query: 421 LQISTPDIKDNIVAQLKQLYRILQTQESWQPMQPTPSMQLPPALPPQ 467
LQISTPDIKDNIVAQLKQLYRILQTQESWQPMQPTPSMQLPPALPPQ
Sbjct: 421 LQISTPDIKDNIVAQLKQLYRILQTQESWQPMQPTPSMQLPPALPPQ 467
>gi|148833515 interferon regulatory factor 5 isoform c [Homo
sapiens]
Length = 488
Score = 454 bits (1168), Expect = e-128
Identities = 244/481 (50%), Positives = 310/481 (64%), Gaps = 53/481 (11%)
Query: 5 PRRVRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVET 64
PRRVRLKPWLVAQV+S YPGL W++ + K F IPW+HATRH P Q+ +NTIFKAWA ET
Sbjct: 12 PRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKET 71
Query: 65 GKYQEGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDIPQPQGSII 124
GKY EGVD+ DPAKWKA LRCALNKSR+F L+YDG +++P P KIY+VC
Sbjct: 72 GKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSN-------- 123
Query: 125 NPGSTGSAPWDEKDNDVDEEDEEDELDQSQHHVPIQDTFPFLNI---------------- 168
P T S P ++ EE+EE+E +Q P L++
Sbjct: 124 GPAPTDSQPPEDYSFGAGEEEEEEE--------ELQRMLPSLSLTEDVKWPPTLQPPTLQ 175
Query: 169 ----------NGSPMAPASVGNCSVGNCSPEAVWPKTEPLEMEVPQAPIQPFYSSPELWI 218
+ SP+AP E + P PL +P A Q P+L I
Sbjct: 176 PPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPG--PLPASLPPAGEQLL---PDLLI 230
Query: 219 SS--LPMTDLDIKFQYRGKEYGQTMTVSNPQGCRLFYGDLGPMPDQEELFGPVSLEQVKF 276
S LP+TDL+IKFQYRG+ + +T+SNP GCRLFY L +Q ELFGP+SLEQV+F
Sbjct: 231 SPHMLPLTDLEIKFQYRGRP-PRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRF 289
Query: 277 PGPEHITNEKQKLFTSKLLDVMDRGLILEVSGHAIYAIRLCQCKVYWSGPCAPSL-VAPN 335
P PE I ++KQ+ +T++LLDV+DRGLIL++ G +YAIRLCQCKV+WSGPCA + PN
Sbjct: 290 PSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPN 349
Query: 336 LIERQKKVKLFCLETFLSDLIAHQKGQIEKQPPFEIYLCFGEEWPDGKPLERKLILVQVI 395
I+R+ K KLF LE FL++LI QKGQ PPFEI+ CFGEEWPD KP E+KLI VQV+
Sbjct: 350 PIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVV 409
Query: 396 PVVARMIYEMFSGDFTRSFDSGSVRLQISTPDIKDNIVAQLKQLYRILQTQESWQPMQPT 455
PV AR++ EMFSG+ + S D S+RLQIS PD+KD +V Q K+L+ I Q+Q+ QP+
Sbjct: 410 PVAARLLLEMFSGELSWSAD--SIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPVAQA 467
Query: 456 P 456
P
Sbjct: 468 P 468
>gi|148833492 interferon regulatory factor 5 isoform c [Homo
sapiens]
Length = 488
Score = 454 bits (1168), Expect = e-128
Identities = 244/481 (50%), Positives = 310/481 (64%), Gaps = 53/481 (11%)
Query: 5 PRRVRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVET 64
PRRVRLKPWLVAQV+S YPGL W++ + K F IPW+HATRH P Q+ +NTIFKAWA ET
Sbjct: 12 PRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKET 71
Query: 65 GKYQEGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDIPQPQGSII 124
GKY EGVD+ DPAKWKA LRCALNKSR+F L+YDG +++P P KIY+VC
Sbjct: 72 GKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSN-------- 123
Query: 125 NPGSTGSAPWDEKDNDVDEEDEEDELDQSQHHVPIQDTFPFLNI---------------- 168
P T S P ++ EE+EE+E +Q P L++
Sbjct: 124 GPAPTDSQPPEDYSFGAGEEEEEEE--------ELQRMLPSLSLTEDVKWPPTLQPPTLQ 175
Query: 169 ----------NGSPMAPASVGNCSVGNCSPEAVWPKTEPLEMEVPQAPIQPFYSSPELWI 218
+ SP+AP E + P PL +P A Q P+L I
Sbjct: 176 PPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPG--PLPASLPPAGEQLL---PDLLI 230
Query: 219 SS--LPMTDLDIKFQYRGKEYGQTMTVSNPQGCRLFYGDLGPMPDQEELFGPVSLEQVKF 276
S LP+TDL+IKFQYRG+ + +T+SNP GCRLFY L +Q ELFGP+SLEQV+F
Sbjct: 231 SPHMLPLTDLEIKFQYRGRP-PRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRF 289
Query: 277 PGPEHITNEKQKLFTSKLLDVMDRGLILEVSGHAIYAIRLCQCKVYWSGPCAPSL-VAPN 335
P PE I ++KQ+ +T++LLDV+DRGLIL++ G +YAIRLCQCKV+WSGPCA + PN
Sbjct: 290 PSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPN 349
Query: 336 LIERQKKVKLFCLETFLSDLIAHQKGQIEKQPPFEIYLCFGEEWPDGKPLERKLILVQVI 395
I+R+ K KLF LE FL++LI QKGQ PPFEI+ CFGEEWPD KP E+KLI VQV+
Sbjct: 350 PIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVV 409
Query: 396 PVVARMIYEMFSGDFTRSFDSGSVRLQISTPDIKDNIVAQLKQLYRILQTQESWQPMQPT 455
PV AR++ EMFSG+ + S D S+RLQIS PD+KD +V Q K+L+ I Q+Q+ QP+
Sbjct: 410 PVAARLLLEMFSGELSWSAD--SIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPVAQA 467
Query: 456 P 456
P
Sbjct: 468 P 468
>gi|148833488 interferon regulatory factor 5 isoform c [Homo
sapiens]
Length = 488
Score = 454 bits (1168), Expect = e-128
Identities = 244/481 (50%), Positives = 310/481 (64%), Gaps = 53/481 (11%)
Query: 5 PRRVRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVET 64
PRRVRLKPWLVAQV+S YPGL W++ + K F IPW+HATRH P Q+ +NTIFKAWA ET
Sbjct: 12 PRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKET 71
Query: 65 GKYQEGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDIPQPQGSII 124
GKY EGVD+ DPAKWKA LRCALNKSR+F L+YDG +++P P KIY+VC
Sbjct: 72 GKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSN-------- 123
Query: 125 NPGSTGSAPWDEKDNDVDEEDEEDELDQSQHHVPIQDTFPFLNI---------------- 168
P T S P ++ EE+EE+E +Q P L++
Sbjct: 124 GPAPTDSQPPEDYSFGAGEEEEEEE--------ELQRMLPSLSLTEDVKWPPTLQPPTLQ 175
Query: 169 ----------NGSPMAPASVGNCSVGNCSPEAVWPKTEPLEMEVPQAPIQPFYSSPELWI 218
+ SP+AP E + P PL +P A Q P+L I
Sbjct: 176 PPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPG--PLPASLPPAGEQLL---PDLLI 230
Query: 219 SS--LPMTDLDIKFQYRGKEYGQTMTVSNPQGCRLFYGDLGPMPDQEELFGPVSLEQVKF 276
S LP+TDL+IKFQYRG+ + +T+SNP GCRLFY L +Q ELFGP+SLEQV+F
Sbjct: 231 SPHMLPLTDLEIKFQYRGRP-PRALTISNPHGCRLFYSQLEATQEQVELFGPISLEQVRF 289
Query: 277 PGPEHITNEKQKLFTSKLLDVMDRGLILEVSGHAIYAIRLCQCKVYWSGPCAPSL-VAPN 335
P PE I ++KQ+ +T++LLDV+DRGLIL++ G +YAIRLCQCKV+WSGPCA + PN
Sbjct: 290 PSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHDSCPN 349
Query: 336 LIERQKKVKLFCLETFLSDLIAHQKGQIEKQPPFEIYLCFGEEWPDGKPLERKLILVQVI 395
I+R+ K KLF LE FL++LI QKGQ PPFEI+ CFGEEWPD KP E+KLI VQV+
Sbjct: 350 PIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKKLITVQVV 409
Query: 396 PVVARMIYEMFSGDFTRSFDSGSVRLQISTPDIKDNIVAQLKQLYRILQTQESWQPMQPT 455
PV AR++ EMFSG+ + S D S+RLQIS PD+KD +V Q K+L+ I Q+Q+ QP+
Sbjct: 410 PVAARLLLEMFSGELSWSAD--SIRLQISNPDLKDRMVEQFKELHHIWQSQQRLQPVAQA 467
Query: 456 P 456
P
Sbjct: 468 P 468
>gi|148833496 interferon regulatory factor 5 isoform b [Homo
sapiens]
Length = 498
Score = 450 bits (1158), Expect = e-126
Identities = 244/491 (49%), Positives = 310/491 (63%), Gaps = 63/491 (12%)
Query: 5 PRRVRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVET 64
PRRVRLKPWLVAQV+S YPGL W++ + K F IPW+HATRH P Q+ +NTIFKAWA ET
Sbjct: 12 PRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKET 71
Query: 65 GKYQEGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDIPQPQGSII 124
GKY EGVD+ DPAKWKA LRCALNKSR+F L+YDG +++P P KIY+VC
Sbjct: 72 GKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSN-------- 123
Query: 125 NPGSTGSAPWDEKDNDVDEEDEEDELDQSQHHVPIQDTFPFLNI---------------- 168
P T S P ++ EE+EE+E +Q P L++
Sbjct: 124 GPAPTDSQPPEDYSFGAGEEEEEEE--------ELQRMLPSLSLTEDVKWPPTLQPPTLR 175
Query: 169 --------------------NGSPMAPASVGNCSVGNCSPEAVWPKTEPLEMEVPQAPIQ 208
+ SP+AP E + P PL +P A Q
Sbjct: 176 PPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPG--PLPASLPPAGEQ 233
Query: 209 PFYSSPELWISS--LPMTDLDIKFQYRGKEYGQTMTVSNPQGCRLFYGDLGPMPDQEELF 266
P+L IS LP+TDL+IKFQYRG+ + +T+SNP GCRLFY L +Q ELF
Sbjct: 234 LL---PDLLISPHMLPLTDLEIKFQYRGRP-PRALTISNPHGCRLFYSQLEATQEQVELF 289
Query: 267 GPVSLEQVKFPGPEHITNEKQKLFTSKLLDVMDRGLILEVSGHAIYAIRLCQCKVYWSGP 326
GP+SLEQV+FP PE I ++KQ+ +T++LLDV+DRGLIL++ G +YAIRLCQCKV+WSGP
Sbjct: 290 GPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGP 349
Query: 327 CAPSL-VAPNLIERQKKVKLFCLETFLSDLIAHQKGQIEKQPPFEIYLCFGEEWPDGKPL 385
CA + PN I+R+ K KLF LE FL++LI QKGQ PPFEI+ CFGEEWPD KP
Sbjct: 350 CASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPR 409
Query: 386 ERKLILVQVIPVVARMIYEMFSGDFTRSFDSGSVRLQISTPDIKDNIVAQLKQLYRILQT 445
E+KLI VQV+PV AR++ EMFSG+ + S D S+RLQIS PD+KD +V Q K+L+ I Q+
Sbjct: 410 EKKLITVQVVPVAARLLLEMFSGELSWSAD--SIRLQISNPDLKDRMVEQFKELHHIWQS 467
Query: 446 QESWQPMQPTP 456
Q+ QP+ P
Sbjct: 468 QQRLQPVAQAP 478
>gi|14249182 interferon regulatory factor 5 isoform b [Homo sapiens]
Length = 498
Score = 450 bits (1158), Expect = e-126
Identities = 244/491 (49%), Positives = 310/491 (63%), Gaps = 63/491 (12%)
Query: 5 PRRVRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVET 64
PRRVRLKPWLVAQV+S YPGL W++ + K F IPW+HATRH P Q+ +NTIFKAWA ET
Sbjct: 12 PRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKET 71
Query: 65 GKYQEGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDIPQPQGSII 124
GKY EGVD+ DPAKWKA LRCALNKSR+F L+YDG +++P P KIY+VC
Sbjct: 72 GKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSN-------- 123
Query: 125 NPGSTGSAPWDEKDNDVDEEDEEDELDQSQHHVPIQDTFPFLNI---------------- 168
P T S P ++ EE+EE+E +Q P L++
Sbjct: 124 GPAPTDSQPPEDYSFGAGEEEEEEE--------ELQRMLPSLSLTEDVKWPPTLQPPTLR 175
Query: 169 --------------------NGSPMAPASVGNCSVGNCSPEAVWPKTEPLEMEVPQAPIQ 208
+ SP+AP E + P PL +P A Q
Sbjct: 176 PPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPG--PLPASLPPAGEQ 233
Query: 209 PFYSSPELWISS--LPMTDLDIKFQYRGKEYGQTMTVSNPQGCRLFYGDLGPMPDQEELF 266
P+L IS LP+TDL+IKFQYRG+ + +T+SNP GCRLFY L +Q ELF
Sbjct: 234 LL---PDLLISPHMLPLTDLEIKFQYRGRP-PRALTISNPHGCRLFYSQLEATQEQVELF 289
Query: 267 GPVSLEQVKFPGPEHITNEKQKLFTSKLLDVMDRGLILEVSGHAIYAIRLCQCKVYWSGP 326
GP+SLEQV+FP PE I ++KQ+ +T++LLDV+DRGLIL++ G +YAIRLCQCKV+WSGP
Sbjct: 290 GPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGP 349
Query: 327 CAPSL-VAPNLIERQKKVKLFCLETFLSDLIAHQKGQIEKQPPFEIYLCFGEEWPDGKPL 385
CA + PN I+R+ K KLF LE FL++LI QKGQ PPFEI+ CFGEEWPD KP
Sbjct: 350 CASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPR 409
Query: 386 ERKLILVQVIPVVARMIYEMFSGDFTRSFDSGSVRLQISTPDIKDNIVAQLKQLYRILQT 445
E+KLI VQV+PV AR++ EMFSG+ + S D S+RLQIS PD+KD +V Q K+L+ I Q+
Sbjct: 410 EKKLITVQVVPVAARLLLEMFSGELSWSAD--SIRLQISNPDLKDRMVEQFKELHHIWQS 467
Query: 446 QESWQPMQPTP 456
Q+ QP+ P
Sbjct: 468 QQRLQPVAQAP 478
>gi|4504727 interferon regulatory factor 5 isoform a [Homo sapiens]
Length = 504
Score = 450 bits (1157), Expect = e-126
Identities = 244/489 (49%), Positives = 313/489 (64%), Gaps = 53/489 (10%)
Query: 5 PRRVRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVET 64
PRRVRLKPWLVAQV+S YPGL W++ + K F IPW+HATRH P Q+ +NTIFKAWA ET
Sbjct: 12 PRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKET 71
Query: 65 GKYQEGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDIPQPQGSII 124
GKY EGVD+ DPAKWKA LRCALNKSR+F L+YDG +++P P KIY+VC
Sbjct: 72 GKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSN-------- 123
Query: 125 NPGSTGSAPWDEKDNDV-DEEDEEDELDQSQHHVPIQDTF-------PFLNI-------- 168
P T S P ++ +EE+EE+EL + + + D P+ +
Sbjct: 124 GPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVKWPP 183
Query: 169 ------------------NGSPMAPASVGNCSVGNCSPEAVWPKTEPLEMEVPQAPIQPF 210
+ SP+AP E + P PL +P A Q
Sbjct: 184 TLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPG--PLPASLPPAGEQLL 241
Query: 211 YSSPELWISS--LPMTDLDIKFQYRGKEYGQTMTVSNPQGCRLFYGDLGPMPDQEELFGP 268
P+L IS LP+TDL+IKFQYRG+ + +T+SNP GCRLFY L +Q ELFGP
Sbjct: 242 ---PDLLISPHMLPLTDLEIKFQYRGRP-PRALTISNPHGCRLFYSQLEATQEQVELFGP 297
Query: 269 VSLEQVKFPGPEHITNEKQKLFTSKLLDVMDRGLILEVSGHAIYAIRLCQCKVYWSGPCA 328
+SLEQV+FP PE I ++KQ+ +T++LLDV+DRGLIL++ G +YAIRLCQCKV+WSGPCA
Sbjct: 298 ISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCA 357
Query: 329 PSL-VAPNLIERQKKVKLFCLETFLSDLIAHQKGQIEKQPPFEIYLCFGEEWPDGKPLER 387
+ PN I+R+ K KLF LE FL++LI QKGQ PPFEI+ CFGEEWPD KP E+
Sbjct: 358 SAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREK 417
Query: 388 KLILVQVIPVVARMIYEMFSGDFTRSFDSGSVRLQISTPDIKDNIVAQLKQLYRILQTQE 447
KLI VQV+PV AR++ EMFSG+ + S D S+RLQIS PD+KD +V Q K+L+ I Q+Q+
Sbjct: 418 KLITVQVVPVAARLLLEMFSGELSWSAD--SIRLQISNPDLKDRMVEQFKELHHIWQSQQ 475
Query: 448 SWQPMQPTP 456
QP+ P
Sbjct: 476 RLQPVAQAP 484
>gi|148833494 interferon regulatory factor 5 isoform d [Homo
sapiens]
Length = 514
Score = 446 bits (1147), Expect = e-125
Identities = 244/499 (48%), Positives = 313/499 (62%), Gaps = 63/499 (12%)
Query: 5 PRRVRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVET 64
PRRVRLKPWLVAQV+S YPGL W++ + K F IPW+HATRH P Q+ +NTIFKAWA ET
Sbjct: 12 PRRVRLKPWLVAQVNSCQYPGLQWVNGEKKLFCIPWRHATRHGPSQDGDNTIFKAWAKET 71
Query: 65 GKYQEGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDIPQPQGSII 124
GKY EGVD+ DPAKWKA LRCALNKSR+F L+YDG +++P P KIY+VC
Sbjct: 72 GKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEVCSN-------- 123
Query: 125 NPGSTGSAPWDEKDNDV-DEEDEEDELDQSQHHVPIQDTF-------PFLNI-------- 168
P T S P ++ +EE+EE+EL + + + D P+ +
Sbjct: 124 GPAPTDSQPPEDYSFGAGEEEEEEEELQRMLPSLSLTDAVQSGPHMTPYSLLKEDVKWPP 183
Query: 169 ----------------------------NGSPMAPASVGNCSVGNCSPEAVWPKTEPLEM 200
+ SP+AP E + P PL
Sbjct: 184 TLQPPTLRPPTLQPPTLQPPVVLGPPAPDPSPLAPPPGNPAGFRELLSEVLEPG--PLPA 241
Query: 201 EVPQAPIQPFYSSPELWISS--LPMTDLDIKFQYRGKEYGQTMTVSNPQGCRLFYGDLGP 258
+P A Q P+L IS LP+TDL+IKFQYRG+ + +T+SNP GCRLFY L
Sbjct: 242 SLPPAGEQLL---PDLLISPHMLPLTDLEIKFQYRGRP-PRALTISNPHGCRLFYSQLEA 297
Query: 259 MPDQEELFGPVSLEQVKFPGPEHITNEKQKLFTSKLLDVMDRGLILEVSGHAIYAIRLCQ 318
+Q ELFGP+SLEQV+FP PE I ++KQ+ +T++LLDV+DRGLIL++ G +YAIRLCQ
Sbjct: 298 TQEQVELFGPISLEQVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQ 357
Query: 319 CKVYWSGPCAPSL-VAPNLIERQKKVKLFCLETFLSDLIAHQKGQIEKQPPFEIYLCFGE 377
CKV+WSGPCA + PN I+R+ K KLF LE FL++LI QKGQ PPFEI+ CFGE
Sbjct: 358 CKVFWSGPCASAHDSCPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGE 417
Query: 378 EWPDGKPLERKLILVQVIPVVARMIYEMFSGDFTRSFDSGSVRLQISTPDIKDNIVAQLK 437
EWPD KP E+KLI VQV+PV AR++ EMFSG+ + S D S+RLQIS PD+KD +V Q K
Sbjct: 418 EWPDRKPREKKLITVQVVPVAARLLLEMFSGELSWSAD--SIRLQISNPDLKDRMVEQFK 475
Query: 438 QLYRILQTQESWQPMQPTP 456
+L+ I Q+Q+ QP+ P
Sbjct: 476 ELHHIWQSQQRLQPVAQAP 494
>gi|167555104 interferon regulatory factor 4 [Homo sapiens]
Length = 451
Score = 224 bits (570), Expect = 2e-58
Identities = 146/433 (33%), Positives = 221/433 (51%), Gaps = 52/433 (12%)
Query: 9 RLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVETGKYQ 68
+L+ WL+ Q+DSG YPGL+W + + F+IPWKHA + +EE+ +FKAWA+ GK++
Sbjct: 23 KLRQWLIDQIDSGKYPGLVWENEEKSIFRIPWKHAGKQDYNREEDAALFKAWALFKGKFR 82
Query: 69 EGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQV-----------CDIP 117
EG+D PDP WK +LRCALNKS +F + + ++ +P K+Y++ +
Sbjct: 83 EGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYRIVPEGAKKGAKQLTLE 142
Query: 118 QPQGSIINPGST----GSAPWDEKDN----DVDEEDEEDELDQSQHHVPIQDTFPFLNIN 169
PQ S+ +P + S P + N +D + DQ +P Q F
Sbjct: 143 DPQMSMSHPYTMTTPYPSLPAQQVHNYMMPPLDRSWRDYVPDQPHPEIPYQCPMTF---- 198
Query: 170 GSPMAPASVGNCSVGNCSPEAVWPKTEPLEMEVPQAPIQPFYSSPELWISSLPMTD--LD 227
P G C + P E + P P +P S E +L +D L
Sbjct: 199 -GPRGHHWQGPACENGCQVTGTFYACAPPESQAPGVPTEPSIRSAE----ALAFSDCRLH 253
Query: 228 IKFQYRGKEYGQTMTVSNPQGCRLFYGDLGPMPDQEELFGPVSLEQVKFPGPEHITNEKQ 287
I YR + + +T S+P+GCR+ +G + +L+QV FP PE + Q
Sbjct: 254 ICLYYR-EILVKELTTSSPEGCRISHG---------HTYDASNLDQVLFPYPE---DNGQ 300
Query: 288 KLFTSKLLDVMDRGLILEVSGHAIYAIRLCQCKVYWSGPCAPSLVAPNLIERQKKVKLFC 347
+ KLL ++RG++L ++ +YA RLCQ ++YW GP A PN +ER + KLF
Sbjct: 301 RKNIEKLLSHLERGVVLWMAPDGLYAKRLCQSRIYWDGPLALCNDRPNKLERDQTCKLFD 360
Query: 348 LETFLSDL--IAHQKGQIEKQPPFEIYLCFGEEWPDGKPLERKLILVQVIPVVARMIY-- 403
+ FLS+L AH + P F++ LCFGEE+PD + +RKLI V P++AR +Y
Sbjct: 361 TQQFLSELQAFAHHGRSL---PRFQVTLCFGEEFPDPQ-RQRKLITAHVEPLLARQLYYF 416
Query: 404 -EMFSGDFTRSFD 415
+ SG F R +D
Sbjct: 417 AQQNSGHFLRGYD 429
>gi|4504567 interferon regulatory factor 8 [Homo sapiens]
Length = 426
Score = 206 bits (524), Expect = 4e-53
Identities = 141/415 (33%), Positives = 212/415 (51%), Gaps = 37/415 (8%)
Query: 9 RLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVETGKYQ 68
RL+ WL+ Q+DS +YPGLIW + + F+IPWKHA + QE + +IFKAWAV GK++
Sbjct: 9 RLRQWLIEQIDSSMYPGLIWENEEKSMFRIPWKHAGKQDYNQEVDASIFKAWAVFKGKFK 68
Query: 69 EGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDIPQPQGSIINPGS 128
EG D +PA WK +LRCALNKS +F + D ++ P K+Y++ + Q + +
Sbjct: 69 EG-DKAEPATWKTRLRCALNKSPDFEEVTDRSQLDISEPYKVYRIVP-EEEQKCKLGVAT 126
Query: 129 TGSAPWDEKDNDVDE-EDEEDELDQSQHHVPIQDTFPFLNINGSPMAPASVGNCSVGNCS 187
G N+V E E E+D+ + D + + SP
Sbjct: 127 AGCV------NEVTEMECGRSEIDELIKEPSVDDYMGMIKRSPSP--------------- 165
Query: 188 PEAVWPKTEP---LEMEVPQAPIQPFYSSPELWISSLPMTDLDIKFQYRGKEYGQTMTVS 244
PEA + P + P+ Y++ + S+ + + I F Y GK GQ T +
Sbjct: 166 PEACRSQLLPDWWAQQPSTGVPLVTGYTTYDAHHSA--FSQMVISFYYGGKLVGQA-TTT 222
Query: 245 NPQGCRLFYGDLGPMPDQEELFGPVSLEQVKFPGPEHITNEKQKLFTSKLLDVMDRGLIL 304
P+GCRL G +P +L+GP LE V+FP + I +E+Q+ T KL ++RG++L
Sbjct: 223 CPEGCRLSLSQPG-LPG-TKLYGPEGLELVRFPPADAIPSERQRQVTRKLFGHLERGVLL 280
Query: 305 EVSGHAIYAIRLCQCKVYWSGPCAPSLVAPNLIERQKKVKLFCLETFLSDLIAHQKGQIE 364
S ++ RLCQ +V+ SG PN +ER + V++F F +L Q
Sbjct: 281 HSSRQGVFVKRLCQGRVFCSGNAVVCKGRPNKLERDEVVQVFDTSQFFRELQQFYNSQ-G 339
Query: 365 KQPPFEIYLCFGEEWPDGKPLERKLILVQVIPVVARMIYEMFSGDFTRSFDSGSV 419
+ P + LCFGEE+PD PL KLILVQ+ + R + E + +S +GSV
Sbjct: 340 RLPDGRVVLCFGEEFPDMAPLRSKLILVQIEQLYVRQLAE----EAGKSCGAGSV 390
>gi|25282407 interferon-stimulated transcription factor 3, gamma
48kDa [Homo sapiens]
Length = 393
Score = 163 bits (412), Expect = 4e-40
Identities = 119/397 (29%), Positives = 184/397 (46%), Gaps = 28/397 (7%)
Query: 9 RLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVETGKYQ 68
+L+ W+V QV+SG +PG+ W F+IPWKHA + +++++ FKAWA+ GKY+
Sbjct: 11 KLRNWVVEQVESGQFPGVCWDDTAKTMFRIPWKHAGKQDFREDQDAAFFKAWAIFKGKYK 70
Query: 69 EGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDIPQPQGSIINPGS 128
EG D PA WK +LRCALNKS EF + + + P K+YQ+ P G +
Sbjct: 71 EG-DTGGPAVWKTRLRCALNKSSEFKEVPERGRMDVAEPYKVYQLL----PPGIVSGQPG 125
Query: 129 TGSAPWDEKDNDVDEEDEEDELDQSQHHVPIQDTFPFLNINGSPMAPASVGNCSVGNCSP 188
T P + + V E +E+E D Q+ N A + +G+ S
Sbjct: 126 TQKVPSKRQHSSVSSERKEEE-DAMQNCTLSPSVLQDSLNNEEEGASGGAVHSDIGSSSS 184
Query: 189 EAVWPKTEPLEM-EVPQAPIQPFYSSPELWISSLPMTDLDIKFQYRGKEYGQTMTVSNPQ 247
+ EP E+ + +AP Q S E + P L + F Y G+ G+ S
Sbjct: 185 SS---SPEPQEVTDTTEAPFQGDQRSLEFLLPPEPDYSLLLTFIYNGRVVGEAQVQS--L 239
Query: 248 GCRLFYGDLGPMPDQEELFGPVSLEQVKFPGPEHITNEKQKLFTSKLLDVMDRGLILEVS 307
CRL G S+EQV FP P + T +LL ++RG+++ +
Sbjct: 240 DCRLVAEPSG---------SESSMEQVLFPKPGPLEP------TQRLLSQLERGILVASN 284
Query: 308 GHAIYAIRLCQCKVYWSGPCAPSLVAPNLIERQKKVKLFCLETFLSDLIAHQKGQIEKQP 367
++ RLC + W+ P AP P+L+ + V+LF F DL+ + +G + P
Sbjct: 285 PRGLFVQRLCPIPISWNAPQAPPGPGPHLLPSNECVELFRTAYFCRDLVRYFQG-LGPPP 343
Query: 368 PFEIYLCFGEEWPDGKPLERKLILVQVIPVVARMIYE 404
F++ L F EE + LI V++ AR + E
Sbjct: 344 KFQVTLNFWEESHGSSHTPQNLITVKMEQAFARYLLE 380
>gi|4504725 interferon regulatory factor 3 [Homo sapiens]
Length = 427
Score = 160 bits (406), Expect = 2e-39
Identities = 125/409 (30%), Positives = 191/409 (46%), Gaps = 49/409 (11%)
Query: 9 RLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVETGKYQ 68
R+ PWLV+Q+D G G+ W+++ RF+IPWKH R QQE+ IF+AWA TG Y
Sbjct: 7 RILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQDAQQEDFG-IFQAWAEATGAYV 65
Query: 69 EGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQ-----VCDIPQPQGSI 123
G D PD WK R ALN+ L D +K+ P +P KIY+ V D QP S
Sbjct: 66 PGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKD-PHDPHKIYEFVNSGVGDFSQPDTS- 123
Query: 124 INPGSTGSAPWDEKDNDVDEEDEEDELDQSQHHVPIQDTFPFLNINGSPMAPASVGNCSV 183
P + G + +ED DEL + P+ D P P + + S+
Sbjct: 124 --PDTNGGGSTSD-----TQEDILDELLGNMVLAPLPDPGPPSLAVAPEPCPQPLRSPSL 176
Query: 184 GNCSPEAVWPKTEPLEMEVPQAPIQPFYSSPELWISSLPMTDLDIKFQYRGKEYGQTMTV 243
N +P +P P E P++ E W + ++ YRG++ Q T+
Sbjct: 177 DNPTP---FPNLGPSE-----NPLKRLLVPGEEW-------EFEVTAFYRGRQVFQ-QTI 220
Query: 244 SNPQGCRLFYGDLGPMPDQEELFGPVSLEQVKFPGPEHITNEKQKLFTSKLLDVMDRGLI 303
S P+G RL ++G D+ PV+L PG +T+ + +L + GL
Sbjct: 221 SCPEGLRLVGSEVG---DRTLPGWPVTLPD---PGMS-LTDRGVMSYVRHVLSCLGGGLA 273
Query: 304 LEVSGHAIYAIRLCQCKVYWSGPCAPSLVAPNL-------IERQKKVKLFCLETFLSDLI 356
L +G ++A RL C YW+ + PN + + K+ +F L F+ DLI
Sbjct: 274 LWRAGQWLWAQRLGHCHTYWA---VSEELLPNSGHGPDGEVPKDKEGGVFDLGPFIVDLI 330
Query: 357 AHQKGQIEKQPPFEIYLCFGEEWPDGKPLERKLILVQVIPVVARMIYEM 405
+G + P + ++ C GE WP +P ++L++V+V+P R + EM
Sbjct: 331 TFTEGS-GRSPRYALWFCVGESWPQDQPWTKRLVMVKVVPTCLRALVEM 378
>gi|4809284 interferon regulatory factor 7 isoform b [Homo sapiens]
Length = 474
Score = 150 bits (380), Expect = 2e-36
Identities = 137/493 (27%), Positives = 207/493 (41%), Gaps = 77/493 (15%)
Query: 1 MALHPRR----VRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTI 56
MAL P R V WL+ ++ SG Y GL WL F++PWKH R E + I
Sbjct: 1 MALAPERAAPRVLFGEWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKD-LSEADARI 59
Query: 57 FKAWAVETGKYQEG---------VDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNP 107
FKAWAV G++ + + A WK RCAL +R F ++ D + + P +P
Sbjct: 60 FKAWAVARGRWPPSSRGGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSGD-PADP 118
Query: 108 VKIY----QVC----------------DIPQPQGS------------IINPGSTGSAPWD 135
K+Y ++C +P PQG + PG + D
Sbjct: 119 HKVYALSRELCWREGPGTDQTEAEAPAAVPPPQGGPPGPFLAHTHAGLQAPGPLPAPAGD 178
Query: 136 EKD---NDVDEEDEEDEL-DQSQHHVPIQDTFPFLNINGSPMAPASVGNCSVGNCSPEAV 191
+ D V + D L S P+ P G P+ A G + SP
Sbjct: 179 KGDLLLQAVQQSCLADHLLTASWGADPVPTKAPGEGQEGLPLTGACAGGEAAAPESPHQA 238
Query: 192 WPKTEPLEMEVPQAPIQPFYSSPELWISSLPMTDLDIKFQYRGKEYGQTMTVSNPQGCRL 251
P P P A SP LD+ Y+G+ Q + V +P C
Sbjct: 239 EPYLSPS----PSACTAVQEPSPGA---------LDVTIMYKGRTVLQKV-VGHPS-CTF 283
Query: 252 FYGDLGPMPDQEELFGPVSLEQVKFPGPEHITNEKQKLFTSKLLDVMDRGLILEVSGHAI 311
YG P + +QV FP P + ++KQ +T +LL + GL LE+ G +
Sbjct: 284 LYGPPDPAVRATDP------QQVAFPSPAELPDQKQLRYTEELLRHVAPGLHLELRGPQL 337
Query: 312 YAIRLCQCKVYWSGPCAPSLVAPN----LIERQKKVKLFCLETFLSDLIAHQKGQIEKQP 367
+A R+ +CKVYW P +P+ L+ R +F F +L+ + Q P
Sbjct: 338 WARRMGKCKVYWEVGGPPGSASPSTPACLLPRNCDTPIFDFRVFFQELVEFRARQRRGSP 397
Query: 368 PFEIYLCFGEEWPDGKPLERKLILVQVIPVVARMIYEMFSGDFTRSFDSGSVRLQISTPD 427
+ IYL FG++ G+P E+ L+LV++ P + R+ E + S DS S+ L +S+ +
Sbjct: 398 RYTIYLGFGQDLSAGRPKEKSLVLVKLEPWLCRVHLEGTQREGVSSLDSSSLSLCLSSAN 457
Query: 428 -IKDNIVAQLKQL 439
+ D+I L +L
Sbjct: 458 SLYDDIECFLMEL 470
>gi|4758610 interferon regulatory factor 7 isoform a [Homo sapiens]
Length = 503
Score = 149 bits (375), Expect = 7e-36
Identities = 139/509 (27%), Positives = 213/509 (41%), Gaps = 80/509 (15%)
Query: 1 MALHPRR----VRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTI 56
MAL P R V WL+ ++ SG Y GL WL F++PWKH R E + I
Sbjct: 1 MALAPERAAPRVLFGEWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKD-LSEADARI 59
Query: 57 FKAWAVETGKYQEG---------VDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNP 107
FKAWAV G++ + + A WK RCAL +R F ++ D + + P +P
Sbjct: 60 FKAWAVARGRWPPSSRGGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSGD-PADP 118
Query: 108 VKIY----QVC----------------DIPQPQGS------------IINPGSTGSAPWD 135
K+Y ++C +P PQG + PG + D
Sbjct: 119 HKVYALSRELCWREGPGTDQTEAEAPAAVPPPQGGPPGPFLAHTHAGLQAPGPLPAPAGD 178
Query: 136 EKD---NDVDEEDEEDEL-DQSQHHVPIQDTFPFLNINGSPMAPASVGNCSV------GN 185
+ D V + D L S P+ P G P+ A G + G
Sbjct: 179 KGDLLLQAVQQSCLADHLLTASWGADPVPTKAPGEGQEGLPLTGACAGGPGLPAGELYGW 238
Query: 186 CSPEAVWPKTEPLEMEVPQA--PIQPFYSSPELWISSLPMTD--------LDIKFQYRGK 235
P +P + +A P P + P L S T LD+ Y+G+
Sbjct: 239 AVETTPSPGPQPAALTTGEAAAPESPHQAEPYLSPSPSACTAVQEPSPGALDVTIMYKGR 298
Query: 236 EYGQTMTVSNPQGCRLFYGDLGPMPDQEELFGPVSLEQVKFPGPEHITNEKQKLFTSKLL 295
Q + V +P C YG P + +QV FP P + ++KQ +T +LL
Sbjct: 299 TVLQKV-VGHPS-CTFLYGPPDPAVRATDP------QQVAFPSPAELPDQKQLRYTEELL 350
Query: 296 DVMDRGLILEVSGHAIYAIRLCQCKVYWSGPCAPSLVAPN----LIERQKKVKLFCLETF 351
+ GL LE+ G ++A R+ +CKVYW P +P+ L+ R +F F
Sbjct: 351 RHVAPGLHLELRGPQLWARRMGKCKVYWEVGGPPGSASPSTPACLLPRNCDTPIFDFRVF 410
Query: 352 LSDLIAHQKGQIEKQPPFEIYLCFGEEWPDGKPLERKLILVQVIPVVARMIYEMFSGDFT 411
+L+ + Q P + IYL FG++ G+P E+ L+LV++ P + R+ E +
Sbjct: 411 FQELVEFRARQRRGSPRYTIYLGFGQDLSAGRPKEKSLVLVKLEPWLCRVHLEGTQREGV 470
Query: 412 RSFDSGSVRLQISTPD-IKDNIVAQLKQL 439
S DS S+ L +S+ + + D+I L +L
Sbjct: 471 SSLDSSSLSLCLSSANSLYDDIECFLMEL 499
>gi|98985819 interferon regulatory factor 7 isoform d [Homo sapiens]
Length = 516
Score = 147 bits (372), Expect = 2e-35
Identities = 135/499 (27%), Positives = 209/499 (41%), Gaps = 76/499 (15%)
Query: 7 RVRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVETGK 66
RV WL+ ++ SG Y GL WL F++PWKH R E + IFKAWAV G+
Sbjct: 24 RVLFGEWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKD-LSEADARIFKAWAVARGR 82
Query: 67 YQEG---------VDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIY----QV 113
+ + + A WK RCAL +R F ++ D + + P +P K+Y ++
Sbjct: 83 WPPSSRGGGPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSGD-PADPHKVYALSREL 141
Query: 114 C----------------DIPQPQGS------------IINPGSTGSAPWDEKD---NDVD 142
C +P PQG + PG + D+ D V
Sbjct: 142 CWREGPGTDQTEAEAPAAVPPPQGGPPGPFLAHTHAGLQAPGPLPAPAGDKGDLLLQAVQ 201
Query: 143 EEDEEDEL-DQSQHHVPIQDTFPFLNINGSPMAPASVGNCSV------GNCSPEAVWPKT 195
+ D L S P+ P G P+ A G + G P
Sbjct: 202 QSCLADHLLTASWGADPVPTKAPGEGQEGLPLTGACAGGPGLPAGELYGWAVETTPSPGP 261
Query: 196 EPLEMEVPQA--PIQPFYSSPELWISSLPMTD--------LDIKFQYRGKEYGQTMTVSN 245
+P + +A P P + P L S T LD+ Y+G+ Q + V +
Sbjct: 262 QPAALTTGEAAAPESPHQAEPYLSPSPSACTAVQEPSPGALDVTIMYKGRTVLQKV-VGH 320
Query: 246 PQGCRLFYGDLGPMPDQEELFGPVSLEQVKFPGPEHITNEKQKLFTSKLLDVMDRGLILE 305
P C YG P + +QV FP P + ++KQ +T +LL + GL LE
Sbjct: 321 PS-CTFLYGPPDPAVRATDP------QQVAFPSPAELPDQKQLRYTEELLRHVAPGLHLE 373
Query: 306 VSGHAIYAIRLCQCKVYWSGPCAPSLVAPN----LIERQKKVKLFCLETFLSDLIAHQKG 361
+ G ++A R+ +CKVYW P +P+ L+ R +F F +L+ +
Sbjct: 374 LRGPQLWARRMGKCKVYWEVGGPPGSASPSTPACLLPRNCDTPIFDFRVFFQELVEFRAR 433
Query: 362 QIEKQPPFEIYLCFGEEWPDGKPLERKLILVQVIPVVARMIYEMFSGDFTRSFDSGSVRL 421
Q P + IYL FG++ G+P E+ L+LV++ P + R+ E + S DS S+ L
Sbjct: 434 QRRGSPRYTIYLGFGQDLSAGRPKEKSLVLVKLEPWLCRVHLEGTQREGVSSLDSSSLSL 493
Query: 422 QISTPD-IKDNIVAQLKQL 439
+S+ + + D+I L +L
Sbjct: 494 CLSSANSLYDDIECFLMEL 512
>gi|153082752 interferon regulatory factor 2 [Homo sapiens]
Length = 349
Score = 115 bits (289), Expect = 6e-26
Identities = 53/141 (37%), Positives = 81/141 (57%), Gaps = 6/141 (4%)
Query: 7 RVRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVETGK 66
R+R++PWL Q++S PGL WL+++ K FQIPW HA RH E++ +F+ WA+ TGK
Sbjct: 5 RMRMRPWLEEQINSNTIPGLKWLNKEKKIFQIPWMHAARHGWDVEKDAPLFRNWAIHTGK 64
Query: 67 YQEGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDIPQPQGSIINP 126
+Q GVD PDP WKA RCA+N + + D + + N ++Y++ + + P
Sbjct: 65 HQPGVDKPDPKTWKANFRCAMNSLPDIEEVKDKSIKKGNNAFRVYRMLPLSE------RP 118
Query: 127 GSTGSAPWDEKDNDVDEEDEE 147
G P EK++ V +E
Sbjct: 119 SKKGKKPKTEKEDKVKHIKQE 139
>gi|4504721 interferon regulatory factor 1 [Homo sapiens]
Length = 325
Score = 106 bits (264), Expect = 5e-23
Identities = 41/107 (38%), Positives = 70/107 (65%)
Query: 7 RVRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVETGK 66
R+R++PWL Q++S PGLIW++++ FQIPWKHA +H ++ +F++WA+ TG+
Sbjct: 5 RMRMRPWLEMQINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAIHTGR 64
Query: 67 YQEGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQV 113
Y+ G +PDP WKA RCA+N + + D ++ + V++Y++
Sbjct: 65 YKAGEKEPDPKTWKANFRCAMNSLPDIEEVKDQSRNKGSSAVRVYRM 111
>gi|239757474 PREDICTED: similar to hCG1785205 [Homo sapiens]
Length = 362
Score = 47.0 bits (110), Expect = 4e-05
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 9/61 (14%)
Query: 16 AQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVETGKYQEGVDDPD 75
AQ++SG Y GL W F+IPWKH + ++AW V GK+ EG +
Sbjct: 15 AQIESGCYVGLCWEDAGKTLFRIPWKHVAKQG---------YQAWMVHKGKHLEGTNKEA 65
Query: 76 P 76
P
Sbjct: 66 P 66
>gi|239751984 PREDICTED: similar to hCG1785205 [Homo sapiens]
Length = 362
Score = 47.0 bits (110), Expect = 4e-05
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 9/61 (14%)
Query: 16 AQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVETGKYQEGVDDPD 75
AQ++SG Y GL W F+IPWKH + ++AW V GK+ EG +
Sbjct: 15 AQIESGCYVGLCWEDAGKTLFRIPWKHVAKQG---------YQAWMVHKGKHLEGTNKEA 65
Query: 76 P 76
P
Sbjct: 66 P 66
>gi|239746471 PREDICTED: hypothetical protein XP_002343764 [Homo
sapiens]
Length = 362
Score = 47.0 bits (110), Expect = 4e-05
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 9/61 (14%)
Query: 16 AQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVETGKYQEGVDDPD 75
AQ++SG Y GL W F+IPWKH + ++AW V GK+ EG +
Sbjct: 15 AQIESGCYVGLCWEDAGKTLFRIPWKHVAKQG---------YQAWMVHKGKHLEGTNKEA 65
Query: 76 P 76
P
Sbjct: 66 P 66
>gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens]
Length = 1729
Score = 36.2 bits (82), Expect = 0.065
Identities = 71/278 (25%), Positives = 114/278 (41%), Gaps = 49/278 (17%)
Query: 26 LIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWAVETGKYQEGVDDPDPAKWKAQLRC 85
L + H S R+ P + T +P+ E+ +T+F+ W+ QEG P K A+ R
Sbjct: 187 LTFNHDGSSRYG-PRTYGTTTAPRDEDGSTLFRGWS------QEG-----PVKSPAECRE 234
Query: 86 ALNKSRE-----FNLMYDG------TKEVPMNPVKIYQVCDIPQPQ---GSIINPG---- 127
+K+ E +L ++G + E+P + K + + P P G +PG
Sbjct: 235 EHSKTPEERSLPSDLAFNGDLAKAASSELPADISKPW-IPSSPAPSSENGGPASPGLPAE 293
Query: 128 STGSAPWDEKDNDVDE---------EDEEDELDQSQHHVPIQDTFPFLNI--NGSPMAPA 176
++GS P + D+ E + E Q+ + + P + GS P
Sbjct: 294 ASGSGPGSPHLHPPDKSSPCHSQLLEAQTPEASQASPCPAVTPSAPSAALPDEGSRHTP- 352
Query: 177 SVGNCSVGNCSPEAVWPKTEPLEMEVPQAPIQPFYSSPELWISSLPMTDLDIKFQYRGKE 236
S G + G +PEA P + P E+ P + QP +SP I + DL F G+E
Sbjct: 353 SPGLPAEG--APEAPRPSSPPPEVLEPHSLDQPPATSPRPLIEVGELLDLTRTFPSGGEE 410
Query: 237 YGQTMTVSNPQGC---RLFYGDL-GPMPDQEELFGPVS 270
+ P R G L P DQE+L G ++
Sbjct: 411 EAKGDAHLRPTSLVQRRFSEGVLQSPSQDQEKLGGSLA 448
>gi|5803229 kaiso [Homo sapiens]
Length = 672
Score = 35.8 bits (81), Expect = 0.085
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 12/120 (10%)
Query: 115 DIPQPQGSIINPGSTGSAPWDEKDNDV------DEEDEEDELDQSQHHVPIQDTFPFLNI 168
D Q G+ I P T S +D ++ D +D++D++ +P ++T P N
Sbjct: 154 DEAQDNGATIMPIITESFSLSAEDYEMKKIIVTDSDDDDDDVIFCSEILPTKETLPSNNT 213
Query: 169 ------NGSPMAPASVGNCSVGNCSPEAVWPKTEPLEMEVPQAPIQPFYSSPELWISSLP 222
N P+A + V + N P T+ L V QA + S +L +SS P
Sbjct: 214 VAQVQSNPGPVAISDVAPSASNNSPPLTNITPTQKLPTPVNQATLSQTQGSEKLLVSSAP 273
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 34.3 bits (77), Expect = 0.25
Identities = 44/209 (21%), Positives = 84/209 (40%), Gaps = 19/209 (9%)
Query: 18 VDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENT-----IFKAWAVETGKYQEGVD 72
V S LYP ++ RD++ ++ K A Q++ N I+ W + +
Sbjct: 10 VPSDLYPLVLGFLRDNQLSEVANKFAKATGATQQDANASSLLDIYSFWLKSAKVPERKLQ 69
Query: 73 DPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDIPQPQGSIINPGSTGSA 132
P KA+ + + + S + + + +EV P K V P + P +A
Sbjct: 70 ANGPVAKKAKKKASSSDSEDSS---EEEEEVQGPPAKKAAV-----PAKRVGLPPGKAAA 121
Query: 133 PWDEKDNDVDEEDEEDELDQSQHHVPIQDTFPFLNINGSPMAPASVGNCSVGNCS----P 188
E + + D++DE DQ + V + P +P A + + S P
Sbjct: 122 KASESSSSEESSDDDDEEDQKKQPVQ-KGVKPQAKAAKAPPKKAKSSDSDSDSSSEDEPP 180
Query: 189 EAVWPKTEPLEMEV-PQAPIQPFYSSPEL 216
+ PK P+ ++ +AP +P ++P++
Sbjct: 181 KNQKPKITPVTVKAQTKAPPKPARAAPKI 209
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 33.1 bits (74), Expect = 0.55
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 100 TKEVPMNPVKIYQVCDIPQPQGSIINPGSTGSAPWDEKDNDVDEEDEEDELDQSQ 154
T E P Q D +P GS NP S+ P E++ + +EE+EE+E D+ +
Sbjct: 234 TDEAYSPPPAPEQKYDPFEPTGS--NPSSSAGTPSPEEEEEEEEEEEEEEEDEEE 286
>gi|7661690 coiled-coil domain containing 9 [Homo sapiens]
Length = 531
Score = 33.1 bits (74), Expect = 0.55
Identities = 34/112 (30%), Positives = 44/112 (39%), Gaps = 14/112 (12%)
Query: 101 KEVPMNPVKIYQVCDIPQPQGSIINPGSTGSAPWDEKDNDV--DEEDEEDELDQSQHHVP 158
KE PM P +I P N G DE+ D+ DEE+EE E+++ P
Sbjct: 392 KETPMQPPEIPAPAHRPPEDEGEENEGEE-----DEEWEDISEDEEEEEIEVEEGDEEEP 446
Query: 159 IQD-TFPFLNINGSPMAPASVGNCSVGNCSPEAVWPKTEPLEMEVPQAPIQP 209
QD P G P + + G SPE P EP P +P P
Sbjct: 447 AQDHQAPEAAPTGIPCSEQAHG----VPFSPEE--PLLEPQAPGTPSSPFSP 492
>gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens]
Length = 619
Score = 32.3 bits (72), Expect = 0.94
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Query: 56 IFKAWAVETGKYQEGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCD 115
+F A + + Y +D P A L A + G + +N ++ ++
Sbjct: 62 LFTAGTLASQPYVYEIDFVQPEALAAILEFAYTSTLTITA---GNVKHILNAARMLEIQC 118
Query: 116 IPQPQGSIINPGSTGSAPWDEKDNDVDEEDEEDELDQSQHHVPIQD 161
I I+ PG G D++D+D D+ED++DE D+ + +D
Sbjct: 119 IVNVCLEIMEPGGDGGEEDDKEDDD-DDEDDDDEEDEEEEEEEEED 163
>gi|226437579 NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 32.0 bits (71), Expect = 1.2
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 108 VKIYQVCDIPQPQGSIINPGSTG-SAPWDEKDNDVDEEDEEDELDQSQH 155
++I C +P P G G G SAP ++D D EED L QH
Sbjct: 1320 LQILPPCQVPPPSGPQSPAGPQGLSAPEQQEDEDSLEEDSPRALGSGQH 1368
>gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 32.0 bits (71), Expect = 1.2
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 108 VKIYQVCDIPQPQGSIINPGSTG-SAPWDEKDNDVDEEDEEDELDQSQH 155
++I C +P P G G G SAP ++D D EED L QH
Sbjct: 1280 LQILPPCQVPPPSGPQSPAGPQGLSAPEQQEDEDSLEEDSPRALGSGQH 1328
>gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1522
Score = 32.0 bits (71), Expect = 1.2
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 108 VKIYQVCDIPQPQGSIINPGSTG-SAPWDEKDNDVDEEDEEDELDQSQH 155
++I C +P P G G G SAP ++D D EED L QH
Sbjct: 1280 LQILPPCQVPPPSGPQSPAGPQGLSAPEQQEDEDSLEEDSPRALGSGQH 1328
>gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 32.0 bits (71), Expect = 1.2
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 108 VKIYQVCDIPQPQGSIINPGSTG-SAPWDEKDNDVDEEDEEDELDQSQH 155
++I C +P P G G G SAP ++D D EED L QH
Sbjct: 1320 LQILPPCQVPPPSGPQSPAGPQGLSAPEQQEDEDSLEEDSPRALGSGQH 1368
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,860,426
Number of Sequences: 37866
Number of extensions: 1139969
Number of successful extensions: 6000
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 5744
Number of HSP's gapped (non-prelim): 169
length of query: 467
length of database: 18,247,518
effective HSP length: 106
effective length of query: 361
effective length of database: 14,233,722
effective search space: 5138373642
effective search space used: 5138373642
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.