Guide to the Human Genome
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Name: OR5H6 Sequence: fasta or formatted (325aa) NCBI GI: 53828732
Description:

olfactory receptor, family 5, subfamily H, member 6

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         17           1
 C cysteine            3.4         11           1
 D aspartate           2.8          9           2
 E glutamate           3.7         12           3
 F phenylalanine       8.3         27           2
 G glycine             3.7         12           2
 H histidine           2.2          7           1
 I isoleucine         10.2         33           2
 K lysine              4.6         15           2
 L leucine            15.1         49           2
 M methionine          4.3         14           2
 N asparagine          3.1         10           1
 P proline             3.4         11           1
 Q glutamine           2.8          9           1
 R arginine            1.5          5           1
 S serine              8.3         27           2
 T threonine           7.1         23           2
 V valine              6.2         20           1
 W tryptophan          0.3          1           1
 Y tyrosine            4.0         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 5, subfamily H, member 6 ... 
OR5H14                0.828   olfactory receptor, family 5, subfamily H, member 14...
OR5H1                 0.789   olfactory receptor, family 5, subfamily H, member 1 ...
OR5H15                0.780   olfactory receptor, family 5, subfamily H, member 15...
OR5H2                 0.759   olfactory receptor, family 5, subfamily H, member 2 ...
OR5AC2                0.575   olfactory receptor, family 5, subfamily AC, member 2...
OR5K1                 0.509   olfactory receptor, family 5, subfamily K, member 1...
OR5K2                 0.489   olfactory receptor, family 5, subfamily K, member 2 ...
OR5K3                 0.470   olfactory receptor, family 5, subfamily K, member 3 ...
OR5K4                 0.470   olfactory receptor, family 5, subfamily K, member 4 ...
OR5T3                 0.455   olfactory receptor, family 5, subfamily T, member 3 ...
OR5I1                 0.455   olfactory receptor, family 5, subfamily I, member 1 [...
OR5T1                 0.447   olfactory receptor, family 5, subfamily T, member 1 ...
OR5T2                 0.447   olfactory receptor, family 5, subfamily T, member 2 ...
OR5AR1                0.446   olfactory receptor, family 5, subfamily AR, member 1...
OR8U9                 0.442   olfactory receptor, family 8, subfamily U, member 9 ...
OR5B12                0.442   olfactory receptor, family 5, subfamily B, member 12...
OR8U1                 0.441   olfactory receptor, family 8, subfamily U, member 1 ...
OR8U8                 0.441   olfactory receptor, family 8, subfamily U, member 8 ...
OR5R1                 0.441   olfactory receptor, family 5, subfamily R, member 1 ...
OR5AP2                0.439   olfactory receptor, family 5, subfamily AP, member 2...
OR8D1                 0.438   olfactory receptor, family 8, subfamily D, member 1 ...
OR8G1                 0.434   olfactory receptor, family 8, subfamily G, member 1 ...
OR5B21                0.431   olfactory receptor, family 5, subfamily B, member 21...
OR8B3                 0.421   olfactory receptor, family 8, subfamily B, member 3 ...
OR8G5                 0.420   olfactory receptor, family 8, subfamily G, member 5 ...
OR5AS1                0.420   olfactory receptor, family 5, subfamily AS, member 1...
OR8B2                 0.418   olfactory receptor, family 8, subfamily B, member 2 ...
OR8B8                 0.413   olfactory receptor, family 8, subfamily B, member 8 ...
OR8J3                 0.412   olfactory receptor, family 8, subfamily J, member 3 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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