Guide to the Human Genome
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Name: OR5H1 Sequence: fasta or formatted (313aa) NCBI GI: 52856424
Description:

olfactory receptor, family 5, subfamily H, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         17           1
 C cysteine            2.6          8           1
 D aspartate           2.9          9           2
 E glutamate           2.6          8           3
 F phenylalanine       7.7         24           2
 G glycine             4.2         13           2
 H histidine           2.6          8           2
 I isoleucine         10.2         32           2
 K lysine              5.8         18           3
 L leucine            14.1         44           3
 M methionine          3.2         10           1
 N asparagine          3.5         11           2
 P proline             4.5         14           1
 Q glutamine           2.2          7           1
 R arginine            1.6          5           1
 S serine              8.0         25           2
 T threonine           6.1         19           2
 V valine              7.3         23           1
 W tryptophan          1.0          3           1
 Y tyrosine            4.8         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 5, subfamily H, member 1 ... 
OR5H15                0.953   olfactory receptor, family 5, subfamily H, member 15...
OR5H14                0.867   olfactory receptor, family 5, subfamily H, member 14...
OR5H6                 0.812   olfactory receptor, family 5, subfamily H, member 6 ...
OR5H2                 0.802   olfactory receptor, family 5, subfamily H, member 2 ...
OR5AC2                0.600   olfactory receptor, family 5, subfamily AC, member 2...
OR5K1                 0.512   olfactory receptor, family 5, subfamily K, member 1...
OR5K2                 0.500   olfactory receptor, family 5, subfamily K, member 2 ...
OR5K4                 0.495   olfactory receptor, family 5, subfamily K, member 4 ...
OR5K3                 0.490   olfactory receptor, family 5, subfamily K, member 3 ...
OR5I1                 0.480   olfactory receptor, family 5, subfamily I, member 1 [...
OR8U9                 0.468   olfactory receptor, family 8, subfamily U, member 9 ...
OR5T3                 0.467   olfactory receptor, family 5, subfamily T, member 3 ...
OR8U1                 0.462   olfactory receptor, family 8, subfamily U, member 1 ...
OR5B12                0.462   olfactory receptor, family 5, subfamily B, member 12...
OR8U8                 0.462   olfactory receptor, family 8, subfamily U, member 8 ...
OR5T1                 0.460   olfactory receptor, family 5, subfamily T, member 1 ...
OR5AR1                0.458   olfactory receptor, family 5, subfamily AR, member 1...
OR5T2                 0.455   olfactory receptor, family 5, subfamily T, member 2 ...
OR9G4                 0.453   olfactory receptor, family 9, subfamily G, member 4 ...
OR5AP2                0.450   olfactory receptor, family 5, subfamily AP, member 2...
OR8G1                 0.448   olfactory receptor, family 8, subfamily G, member 1 ...
OR5B21                0.447   olfactory receptor, family 5, subfamily B, member 21...
OR8D1                 0.447   olfactory receptor, family 8, subfamily D, member 1 ...
OR5R1                 0.442   olfactory receptor, family 5, subfamily R, member 1 ...
OR8D4                 0.440   olfactory receptor, family 8, subfamily D, member 4 ...
OR8G5                 0.438   olfactory receptor, family 8, subfamily G, member 5 ...
OR5AS1                0.433   olfactory receptor, family 5, subfamily AS, member 1...
OR8B3                 0.433   olfactory receptor, family 8, subfamily B, member 3 ...
OR8B2                 0.432   olfactory receptor, family 8, subfamily B, member 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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