Guide to the Human Genome
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Name: ZNF233 Sequence: fasta or formatted (670aa) NCBI GI: 32308169
Description:

zinc finger protein 233

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.1         14           1
 C cysteine            5.2         35           1
 D aspartate           5.2         35           2
 E glutamate           6.4         43           2
 F phenylalanine       3.6         24           1
 G glycine             7.9         53           1
 H histidine           6.6         44           2
 I isoleucine          3.1         21           2
 K lysine              8.4         56           1
 L leucine             7.2         48           2
 M methionine          1.0          7           2
 N asparagine          4.0         27           2
 P proline             2.7         18           1
 Q glutamine           8.4         56           2
 R arginine            5.2         35           1
 S serine              9.4         63           2
 T threonine           4.0         27           2
 V valine              5.1         34           2
 W tryptophan          1.2          8           1
 Y tyrosine            3.3         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 233 
ZNF235                0.499   zinc finger protein 93 homolog 
ZFP112                0.464   zinc finger protein 228 isoform 1 
ZFP112                0.455   zinc finger protein 228 isoform 2 
ZNF226                0.442   zinc finger protein 226 isoform a 
ZNF226                0.442   zinc finger protein 226 isoform a 
ZNF227                0.433   zinc finger protein 227 
ZNF45                 0.401   zinc finger protein 45 
ZNF234                0.391   zinc finger protein 234 
ZNF234                0.391   zinc finger protein 234 
ZNF229                0.367   zinc finger protein 229 
ZNF224                0.364   zinc finger protein 224 
ZNF225                0.346   zinc finger protein 225 
ZNF214                0.319   zinc finger protein 214 
ZNF420                0.310   zinc finger protein 420 
ZNF184                0.308   zinc finger protein 184 
ZNF470                0.308   zinc finger protein 470 
ZNF616                0.307   zinc finger protein 616 
ZNF624                0.306   zinc finger protein 624 
LOC388559             0.303   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.303   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.303   PREDICTED: hypothetical protein LOC388559 
ZNF836                0.303   zinc finger protein 836 
ZNF99                 0.303   zinc finger protein 99 
ZNF665                0.303   zinc finger protein 665 
ZNF726                0.303   PREDICTED: zinc finger protein 726 
ZNF726                0.303   PREDICTED: zinc finger protein 726 
ZNF726                0.303   PREDICTED: zinc finger protein 726 
ZNF91                 0.303   zinc finger protein 91 
ZNF429                0.300   zinc finger protein 429 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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