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Search of human proteins with 13386482
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13386482 spexin [Homo sapiens]
(116 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13386482 spexin [Homo sapiens] 232 5e-62
gi|239755891 PREDICTED: hypothetical protein [Homo sapiens] 29 0.70
gi|123701900 solute carrier family 12 (potassium/chloride transp... 29 0.91
gi|110224458 solute carrier family 12, member 6 isoform e [Homo ... 28 1.2
gi|110224456 solute carrier family 12, member 6 isoform d [Homo ... 28 1.2
gi|110224454 solute carrier family 12, member 6 isoform c [Homo ... 28 1.2
gi|110224452 solute carrier family 12, member 6 isoform c [Homo ... 28 1.2
gi|4826780 solute carrier family 12, member 6 isoform b [Homo sa... 28 1.2
gi|110224449 solute carrier family 12, member 6 isoform a [Homo ... 28 1.2
gi|225579067 solute carrier family 12, member 4 isoform e [Homo ... 28 1.6
gi|225579065 solute carrier family 12, member 4 isoform d [Homo ... 28 1.6
gi|225579063 solute carrier family 12, member 4 isoform c [Homo ... 28 1.6
gi|225579061 solute carrier family 12, member 4 isoform b [Homo ... 28 1.6
gi|4827006 solute carrier family 12, member 4 isoform a [Homo sa... 28 1.6
gi|39725938 polymerase (RNA) III (DNA directed) polypeptide A, 1... 28 1.6
gi|118421089 chromodomain helicase DNA binding protein 2 isoform... 27 2.7
gi|110611184 chromodomain helicase DNA binding protein 2 isoform... 27 2.7
gi|253795488 hypothetical protein LOC55793 isoform 3 [Homo sapiens] 27 3.5
gi|31377841 hypothetical protein LOC55793 isoform 1 [Homo sapiens] 27 3.5
gi|198041678 solute carrier family 12 (potassium-chloride transp... 27 3.5
gi|11968148 solute carrier family 12 (potassium-chloride transpo... 27 3.5
gi|169163721 PREDICTED: similar to EID2 protein [Homo sapiens] 27 4.5
gi|239747780 PREDICTED: hypothetical protein XP_002348293 [Homo ... 27 4.5
gi|239741723 PREDICTED: hypothetical protein XP_002342306 [Homo ... 27 4.5
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] 27 4.5
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens] 27 4.5
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens] 27 4.5
gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens] 27 4.5
gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens] 27 4.5
gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens] 27 4.5
>gi|13386482 spexin [Homo sapiens]
Length = 116
Score = 232 bits (591), Expect = 5e-62
Identities = 116/116 (100%), Positives = 116/116 (100%)
Query: 1 MKGLRSLAATTLALFLVFVFLGNSSCAPQRLLERRNWTPQAMLYLKGAQGRRFISDQSRR 60
MKGLRSLAATTLALFLVFVFLGNSSCAPQRLLERRNWTPQAMLYLKGAQGRRFISDQSRR
Sbjct: 1 MKGLRSLAATTLALFLVFVFLGNSSCAPQRLLERRNWTPQAMLYLKGAQGRRFISDQSRR 60
Query: 61 KDLSDRPLPERRSPNPQLLTIPEAATILLASLQKSPEDEEKNFDQTRFLEDSLLNW 116
KDLSDRPLPERRSPNPQLLTIPEAATILLASLQKSPEDEEKNFDQTRFLEDSLLNW
Sbjct: 61 KDLSDRPLPERRSPNPQLLTIPEAATILLASLQKSPEDEEKNFDQTRFLEDSLLNW 116
>gi|239755891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 246
Score = 29.3 bits (64), Expect = 0.70
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 25 SCAPQRLLE--RRNWTPQAMLYLKGAQGRRFISDQSRRKDLSDRPLPERRSPNPQLLTIP 82
S P R E RR W QA +GA+ R +S R + RP R P+L +P
Sbjct: 106 SAQPSRGSETPRRGWRKQAATLGRGAEPRFGLSLPRRSELRKPRPSAAPRRTRPRLAALP 165
Query: 83 EAATI 87
+A +
Sbjct: 166 VSAPL 170
>gi|123701900 solute carrier family 12 (potassium/chloride
transporters), member 7 [Homo sapiens]
Length = 1083
Score = 28.9 bits (63), Expect = 0.91
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 4 LRSLAATTLALFLVFVFLGNSSCAPQRLLERRNWTPQAMLY 44
L S+A FL+ N +CA Q LL NW P+ Y
Sbjct: 574 LDSVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFKFY 614
>gi|110224458 solute carrier family 12, member 6 isoform e [Homo
sapiens]
Length = 1135
Score = 28.5 bits (62), Expect = 1.2
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 7 LAATTLALFLVFVFLG-NSSCAPQRLLERRNWTPQAMLY 44
L A L++F + +L N +CA Q LL NW P+ Y
Sbjct: 626 LVAPILSMFFLMCYLFVNLACALQTLLRTPNWRPRFRYY 664
>gi|110224456 solute carrier family 12, member 6 isoform d [Homo
sapiens]
Length = 1141
Score = 28.5 bits (62), Expect = 1.2
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 7 LAATTLALFLVFVFLG-NSSCAPQRLLERRNWTPQAMLY 44
L A L++F + +L N +CA Q LL NW P+ Y
Sbjct: 632 LVAPILSMFFLMCYLFVNLACALQTLLRTPNWRPRFRYY 670
>gi|110224454 solute carrier family 12, member 6 isoform c [Homo
sapiens]
Length = 1091
Score = 28.5 bits (62), Expect = 1.2
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 7 LAATTLALFLVFVFLG-NSSCAPQRLLERRNWTPQAMLY 44
L A L++F + +L N +CA Q LL NW P+ Y
Sbjct: 582 LVAPILSMFFLMCYLFVNLACALQTLLRTPNWRPRFRYY 620
>gi|110224452 solute carrier family 12, member 6 isoform c [Homo
sapiens]
Length = 1091
Score = 28.5 bits (62), Expect = 1.2
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 7 LAATTLALFLVFVFLG-NSSCAPQRLLERRNWTPQAMLY 44
L A L++F + +L N +CA Q LL NW P+ Y
Sbjct: 582 LVAPILSMFFLMCYLFVNLACALQTLLRTPNWRPRFRYY 620
>gi|4826780 solute carrier family 12, member 6 isoform b [Homo
sapiens]
Length = 1099
Score = 28.5 bits (62), Expect = 1.2
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 7 LAATTLALFLVFVFLG-NSSCAPQRLLERRNWTPQAMLY 44
L A L++F + +L N +CA Q LL NW P+ Y
Sbjct: 590 LVAPILSMFFLMCYLFVNLACALQTLLRTPNWRPRFRYY 628
>gi|110224449 solute carrier family 12, member 6 isoform a [Homo
sapiens]
Length = 1150
Score = 28.5 bits (62), Expect = 1.2
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 7 LAATTLALFLVFVFLG-NSSCAPQRLLERRNWTPQAMLY 44
L A L++F + +L N +CA Q LL NW P+ Y
Sbjct: 641 LVAPILSMFFLMCYLFVNLACALQTLLRTPNWRPRFRYY 679
>gi|225579067 solute carrier family 12, member 4 isoform e [Homo
sapiens]
Length = 1054
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 7 LAATTLALFLVFVFLG-NSSCAPQRLLERRNWTPQAMLY 44
+ A L++F + +L N +CA Q LL NW P+ Y
Sbjct: 545 MVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFKYY 583
>gi|225579065 solute carrier family 12, member 4 isoform d [Homo
sapiens]
Length = 1079
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 7 LAATTLALFLVFVFLG-NSSCAPQRLLERRNWTPQAMLY 44
+ A L++F + +L N +CA Q LL NW P+ Y
Sbjct: 570 MVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFKYY 608
>gi|225579063 solute carrier family 12, member 4 isoform c [Homo
sapiens]
Length = 1087
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 7 LAATTLALFLVFVFLG-NSSCAPQRLLERRNWTPQAMLY 44
+ A L++F + +L N +CA Q LL NW P+ Y
Sbjct: 578 MVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFKYY 616
>gi|225579061 solute carrier family 12, member 4 isoform b [Homo
sapiens]
Length = 1079
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 7 LAATTLALFLVFVFLG-NSSCAPQRLLERRNWTPQAMLY 44
+ A L++F + +L N +CA Q LL NW P+ Y
Sbjct: 576 MVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFKYY 614
>gi|4827006 solute carrier family 12, member 4 isoform a [Homo
sapiens]
Length = 1085
Score = 28.1 bits (61), Expect = 1.6
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 7 LAATTLALFLVFVFLG-NSSCAPQRLLERRNWTPQAMLY 44
+ A L++F + +L N +CA Q LL NW P+ Y
Sbjct: 576 MVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFKYY 614
>gi|39725938 polymerase (RNA) III (DNA directed) polypeptide A,
155kDa [Homo sapiens]
Length = 1390
Score = 28.1 bits (61), Expect = 1.6
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 35 RNWTPQAMLYLKGAQGRRFISDQSRRKDLSDRPLPERRSPNPQLLTIPEAATILLASLQK 94
+ WT + LKG QGR + +R D S R + SP+P L A + +A +
Sbjct: 335 KKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGRTV---ISPDPNLRIDEVAVPVHVAKILT 391
Query: 95 SPEDEEK 101
PE K
Sbjct: 392 FPEKVNK 398
>gi|118421089 chromodomain helicase DNA binding protein 2 isoform 1
[Homo sapiens]
Length = 1828
Score = 27.3 bits (59), Expect = 2.7
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 22 GNSSCAP----QRLLERRNWTPQAMLYLKGAQGRRFISDQSRRKDLSDRPLPERRSPNPQ 77
G+ S +P QR L+++ Q + QG S+ ++K + RP+P R P P+
Sbjct: 131 GSESGSPKRRGQRQLKKQEKWKQEPSEDEQEQGTSAESEPEQKKVKARRPVPRRTVPKPR 190
Query: 78 LLTIPEAATILLASLQKSPEDEE 100
+ P+ S ED++
Sbjct: 191 VKKQPKTQRGKRKKQDSSDEDDD 213
>gi|110611184 chromodomain helicase DNA binding protein 2 isoform 2
[Homo sapiens]
Length = 501
Score = 27.3 bits (59), Expect = 2.7
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 22 GNSSCAP----QRLLERRNWTPQAMLYLKGAQGRRFISDQSRRKDLSDRPLPERRSPNPQ 77
G+ S +P QR L+++ Q + QG S+ ++K + RP+P R P P+
Sbjct: 131 GSESGSPKRRGQRQLKKQEKWKQEPSEDEQEQGTSAESEPEQKKVKARRPVPRRTVPKPR 190
Query: 78 LLTIPEAATILLASLQKSPEDEE 100
+ P+ S ED++
Sbjct: 191 VKKQPKTQRGKRKKQDSSDEDDD 213
>gi|253795488 hypothetical protein LOC55793 isoform 3 [Homo sapiens]
Length = 517
Score = 26.9 bits (58), Expect = 3.5
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 62 DLSDRPLPERRS--PNPQLLTIPEAATILLASL-QKSPE 97
D + PLPE S P P L T+PE TI S+ Q+ P+
Sbjct: 112 DNLESPLPEASSAPPGPTLGTLPEVETIRACSMPQELPQ 150
>gi|31377841 hypothetical protein LOC55793 isoform 1 [Homo sapiens]
Length = 469
Score = 26.9 bits (58), Expect = 3.5
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 62 DLSDRPLPERRS--PNPQLLTIPEAATILLASL-QKSPE 97
D + PLPE S P P L T+PE TI S+ Q+ P+
Sbjct: 64 DNLESPLPEASSAPPGPTLGTLPEVETIRACSMPQELPQ 102
>gi|198041678 solute carrier family 12 (potassium-chloride
transporter), member 5 isoform 1 [Homo sapiens]
Length = 1139
Score = 26.9 bits (58), Expect = 3.5
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 4 LRSLAATTLALFLVFVFLGNSSCAPQRLLERRNWTPQAMLY 44
L +A FL+ N +CA Q LL NW P+ Y
Sbjct: 577 LDEVAPILSMFFLMCYMFVNLACAVQTLLRTPNWRPRFRYY 617
>gi|11968148 solute carrier family 12 (potassium-chloride
transporter), member 5 isoform 2 [Homo sapiens]
Length = 1116
Score = 26.9 bits (58), Expect = 3.5
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 4 LRSLAATTLALFLVFVFLGNSSCAPQRLLERRNWTPQAMLY 44
L +A FL+ N +CA Q LL NW P+ Y
Sbjct: 554 LDEVAPILSMFFLMCYMFVNLACAVQTLLRTPNWRPRFRYY 594
>gi|169163721 PREDICTED: similar to EID2 protein [Homo sapiens]
Length = 156
Score = 26.6 bits (57), Expect = 4.5
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 14/103 (13%)
Query: 3 GLRSLAATTLALFLVFVFLGNSSCAPQRLLERRNWTPQAMLYLKGAQGRRFISDQSRRKD 62
GL L L LV V N AP R+ E A+GRR +++ R ++
Sbjct: 40 GLAVLPNLCLQHPLVIVLGINYPIAPSRMQEL-------------AEGRRRLAEACRARE 86
Query: 63 LSDRPLPERRSPNPQLLTIPEAATILLASLQKSPEDEEKNFDQ 105
+ ++R+P I T L AS SP EE +D+
Sbjct: 87 AAF-DAEQQRNPRRMDSDILTLTTALTASEATSPLTEELGYDE 128
>gi|239747780 PREDICTED: hypothetical protein XP_002348293 [Homo
sapiens]
Length = 546
Score = 26.6 bits (57), Expect = 4.5
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 14/103 (13%)
Query: 3 GLRSLAATTLALFLVFVFLGNSSCAPQRLLERRNWTPQAMLYLKGAQGRRFISDQSRRKD 62
GL L L LV V N AP R+ E A+GRR +++ R ++
Sbjct: 354 GLAVLPNLCLQHPLVIVLGINYPIAPSRMQEL-------------AEGRRRLAEACRARE 400
Query: 63 LSDRPLPERRSPNPQLLTIPEAATILLASLQKSPEDEEKNFDQ 105
+ ++R+P I T L AS SP EE +D+
Sbjct: 401 AAF-DAEQQRNPRRMDSDILTLTTALTASEATSPLTEELGYDE 442
>gi|239741723 PREDICTED: hypothetical protein XP_002342306 [Homo
sapiens]
Length = 488
Score = 26.6 bits (57), Expect = 4.5
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 14/103 (13%)
Query: 3 GLRSLAATTLALFLVFVFLGNSSCAPQRLLERRNWTPQAMLYLKGAQGRRFISDQSRRKD 62
GL L L LV V N AP R+ E A+GRR +++ R ++
Sbjct: 354 GLAVLPNLCLQHPLVIVLGINYPIAPSRMQEL-------------AEGRRRLAEACRARE 400
Query: 63 LSDRPLPERRSPNPQLLTIPEAATILLASLQKSPEDEEKNFDQ 105
+ ++R+P I T L AS SP EE +D+
Sbjct: 401 AAF-DAEQQRNPRRMDSDILTLTTALTASEATSPLTEELGYDE 442
>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
Length = 983
Score = 26.6 bits (57), Expect = 4.5
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Query: 23 NSSCAPQRLLERRNWTPQAMLYLKGAQGRRFISDQSRRK-DLSDRPLPERRSPNPQLLTI 81
NSS Q+L E ++ +AM + +S Q + K L + S +L
Sbjct: 480 NSSDLSQKLKETQSKYEEAM--------KEVLSVQKQMKLGLVSPESMDNYSHFHELRVT 531
Query: 82 PEAATILLASLQKSPEDEEKNFDQTRFLEDSLL 114
E +L LQ + E+ E+N ++ R LE+ L+
Sbjct: 532 EEEINVLKQDLQNALEESERNKEKVRELEEKLV 564
>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
Length = 972
Score = 26.6 bits (57), Expect = 4.5
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Query: 23 NSSCAPQRLLERRNWTPQAMLYLKGAQGRRFISDQSRRK-DLSDRPLPERRSPNPQLLTI 81
NSS Q+L E ++ +AM + +S Q + K L + S +L
Sbjct: 469 NSSDLSQKLKETQSKYEEAM--------KEVLSVQKQMKLGLVSPESMDNYSHFHELRVT 520
Query: 82 PEAATILLASLQKSPEDEEKNFDQTRFLEDSLL 114
E +L LQ + E+ E+N ++ R LE+ L+
Sbjct: 521 EEEINVLKQDLQNALEESERNKEKVRELEEKLV 553
>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
Length = 951
Score = 26.6 bits (57), Expect = 4.5
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Query: 23 NSSCAPQRLLERRNWTPQAMLYLKGAQGRRFISDQSRRK-DLSDRPLPERRSPNPQLLTI 81
NSS Q+L E ++ +AM + +S Q + K L + S +L
Sbjct: 448 NSSDLSQKLKETQSKYEEAM--------KEVLSVQKQMKLGLVSPESMDNYSHFHELRVT 499
Query: 82 PEAATILLASLQKSPEDEEKNFDQTRFLEDSLL 114
E +L LQ + E+ E+N ++ R LE+ L+
Sbjct: 500 EEEINVLKQDLQNALEESERNKEKVRELEEKLV 532
>gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 26.6 bits (57), Expect = 4.5
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Query: 23 NSSCAPQRLLERRNWTPQAMLYLKGAQGRRFISDQSRRK-DLSDRPLPERRSPNPQLLTI 81
NSS Q+L E ++ +AM + +S Q + K L + S +L
Sbjct: 477 NSSDLSQKLKETQSKYEEAM--------KEVLSVQKQMKLGLVSPESMDNYSHFHELRVT 528
Query: 82 PEAATILLASLQKSPEDEEKNFDQTRFLEDSLL 114
E +L LQ + E+ E+N ++ R LE+ L+
Sbjct: 529 EEEINVLKQDLQNALEESERNKEKVRELEEKLV 561
>gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 26.6 bits (57), Expect = 4.5
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Query: 23 NSSCAPQRLLERRNWTPQAMLYLKGAQGRRFISDQSRRK-DLSDRPLPERRSPNPQLLTI 81
NSS Q+L E ++ +AM + +S Q + K L + S +L
Sbjct: 477 NSSDLSQKLKETQSKYEEAM--------KEVLSVQKQMKLGLVSPESMDNYSHFHELRVT 528
Query: 82 PEAATILLASLQKSPEDEEKNFDQTRFLEDSLL 114
E +L LQ + E+ E+N ++ R LE+ L+
Sbjct: 529 EEEINVLKQDLQNALEESERNKEKVRELEEKLV 561
>gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 26.6 bits (57), Expect = 4.5
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Query: 23 NSSCAPQRLLERRNWTPQAMLYLKGAQGRRFISDQSRRK-DLSDRPLPERRSPNPQLLTI 81
NSS Q+L E ++ +AM + +S Q + K L + S +L
Sbjct: 477 NSSDLSQKLKETQSKYEEAM--------KEVLSVQKQMKLGLVSPESMDNYSHFHELRVT 528
Query: 82 PEAATILLASLQKSPEDEEKNFDQTRFLEDSLL 114
E +L LQ + E+ E+N ++ R LE+ L+
Sbjct: 529 EEEINVLKQDLQNALEESERNKEKVRELEEKLV 561
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,490,556
Number of Sequences: 37866
Number of extensions: 206817
Number of successful extensions: 766
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 741
Number of HSP's gapped (non-prelim): 47
length of query: 116
length of database: 18,247,518
effective HSP length: 86
effective length of query: 30
effective length of database: 14,991,042
effective search space: 449731260
effective search space used: 449731260
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.