Guide to the Human Genome
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Name: SLC12A5 Sequence: fasta or formatted (1139aa) NCBI GI: 198041678
Description:

solute carrier family 12 (potassium-chloride transporter), member 5 isoform 1

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [1116aa] solute carrier family 12 (potassium-chloride transporter), member...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         75           3
 C cysteine            2.1         24           2
 D aspartate           3.5         40           2
 E glutamate           6.8         78           3
 F phenylalanine       4.2         48           2
 G glycine             8.3         95           3
 H histidine           2.1         24           2
 I isoleucine          5.6         64           1
 K lysine              4.1         47           3
 L leucine            10.3        117           3
 M methionine          3.6         41           1
 N asparagine          4.2         48           2
 P proline             5.0         57           2
 Q glutamine           2.6         30           1
 R arginine            5.4         62           2
 S serine              7.5         85           3
 T threonine           5.9         67           2
 V valine              7.6         86           2
 W tryptophan          1.8         20           2
 Y tyrosine            2.7         31           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 12 (potassium-chloride transp... 
SLC12A5               0.964   solute carrier family 12 (potassium-chloride transpo...
SLC12A7               0.685   solute carrier family 12 (potassium/chloride transp...
SLC12A6               0.674   solute carrier family 12, member 6 isoform e 
SLC12A6               0.672   solute carrier family 12, member 6 isoform b 
SLC12A6               0.672   solute carrier family 12, member 6 isoform d 
SLC12A6               0.672   solute carrier family 12, member 6 isoform c 
SLC12A6               0.672   solute carrier family 12, member 6 isoform c 
SLC12A6               0.672   solute carrier family 12, member 6 isoform a 
SLC12A4               0.652   solute carrier family 12, member 4 isoform a 
SLC12A4               0.651   solute carrier family 12, member 4 isoform e 
SLC12A4               0.651   solute carrier family 12, member 4 isoform d 
SLC12A4               0.644   solute carrier family 12, member 4 isoform b 
SLC12A4               0.636   solute carrier family 12, member 4 isoform c 
SLC12A3               0.088   solute carrier family 12, member 3 isoform 3 
SLC12A3               0.087   solute carrier family 12, member 3 isoform 2 
SLC12A3               0.087   solute carrier family 12, member 3 isoform 1 
SLC12A2               0.086   solute carrier family 12 (sodium/potassium/chloride t...
SLC12A1               0.083   sodium potassium chloride cotransporter 2 
SLC12A9               0.074   solute carrier family 12 (potassium/chloride transpo...
SLC12A8               0.033   solute carrier family 12, member 8 
SLC7A8                0.009   solute carrier family 7 (cationic amino acid transpo...
SLC7A8                0.009   solute carrier family 7 (cationic amino acid transpo...
HYOU1                 0.007   hypoxia up-regulated 1 precursor 
HYOU1                 0.007   hypoxia up-regulated 1 precursor 
SLC7A2                0.007   solute carrier family 7, member 2 isoform 1 
SLC7A9                0.006   solute carrier family 7, member 9 
SLC7A9                0.006   solute carrier family 7, member 9 
HP1BP3                0.006   HP1-BP74 
RASGRF1               0.006   Ras protein-specific guanine nucleotide-releasing f...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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