Guide to the Human Genome
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Name: SLC12A5 Sequence: fasta or formatted (1116aa) NCBI GI: 11968148
Description:

solute carrier family 12 (potassium-chloride transporter), member 5 isoform 2

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [1139aa] solute carrier family 12 (potassium-chloride transporter), member...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         73           3
 C cysteine            2.2         25           2
 D aspartate           3.6         40           2
 E glutamate           6.9         77           3
 F phenylalanine       4.2         47           2
 G glycine             8.6         96           3
 H histidine           2.0         22           2
 I isoleucine          5.7         64           1
 K lysine              4.1         46           3
 L leucine            10.5        117           3
 M methionine          3.7         41           1
 N asparagine          4.6         51           2
 P proline             4.6         51           2
 Q glutamine           2.7         30           1
 R arginine            5.0         56           2
 S serine              7.2         80           3
 T threonine           5.9         66           2
 V valine              7.4         83           2
 W tryptophan          1.8         20           2
 Y tyrosine            2.8         31           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 12 (potassium-chloride transpo... 
SLC12A5               0.983   solute carrier family 12 (potassium-chloride transp...
SLC12A7               0.700   solute carrier family 12 (potassium/chloride transp...
SLC12A6               0.686   solute carrier family 12, member 6 isoform e 
SLC12A6               0.686   solute carrier family 12, member 6 isoform d 
SLC12A6               0.686   solute carrier family 12, member 6 isoform c 
SLC12A6               0.686   solute carrier family 12, member 6 isoform c 
SLC12A6               0.686   solute carrier family 12, member 6 isoform b 
SLC12A6               0.686   solute carrier family 12, member 6 isoform a 
SLC12A4               0.665   solute carrier family 12, member 4 isoform e 
SLC12A4               0.664   solute carrier family 12, member 4 isoform d 
SLC12A4               0.664   solute carrier family 12, member 4 isoform a 
SLC12A4               0.656   solute carrier family 12, member 4 isoform b 
SLC12A4               0.649   solute carrier family 12, member 4 isoform c 
SLC12A3               0.090   solute carrier family 12, member 3 isoform 3 
SLC12A3               0.088   solute carrier family 12, member 3 isoform 2 
SLC12A3               0.088   solute carrier family 12, member 3 isoform 1 
SLC12A2               0.088   solute carrier family 12 (sodium/potassium/chloride t...
SLC12A1               0.084   sodium potassium chloride cotransporter 2 
SLC12A9               0.075   solute carrier family 12 (potassium/chloride transpo...
SLC12A8               0.034   solute carrier family 12, member 8 
SLC7A8                0.009   solute carrier family 7 (cationic amino acid transpo...
SLC7A8                0.009   solute carrier family 7 (cationic amino acid transpo...
HYOU1                 0.008   hypoxia up-regulated 1 precursor 
HYOU1                 0.008   hypoxia up-regulated 1 precursor 
SLC7A2                0.007   solute carrier family 7, member 2 isoform 1 
SLC7A9                0.006   solute carrier family 7, member 9 
SLC7A9                0.006   solute carrier family 7, member 9 
HP1BP3                0.006   HP1-BP74 
RASGRF1               0.006   Ras protein-specific guanine nucleotide-releasing f...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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