Guide to the Human Genome
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Name: SLC12A4 Sequence: fasta or formatted (1079aa) NCBI GI: 225579061
Description:

solute carrier family 12, member 4 isoform b

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [1087aa] solute carrier family 12, member 4 isoform c
alt prot [1079aa] solute carrier family 12, member 4 isoform d
alt prot [1054aa] solute carrier family 12, member 4 isoform e
alt prot [1085aa] solute carrier family 12, member 4 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         86           3
 C cysteine            1.9         20           4
 D aspartate           4.4         47           2
 E glutamate           5.7         61           3
 F phenylalanine       4.3         46           2
 G glycine             7.7         83           3
 H histidine           2.3         25           1
 I isoleucine          5.8         63           2
 K lysine              3.5         38           2
 L leucine            12.1        131           3
 M methionine          3.3         36           2
 N asparagine          3.2         35           2
 P proline             4.4         48           2
 Q glutamine           2.6         28           1
 R arginine            5.4         58           3
 S serine              6.8         73           2
 T threonine           5.5         59           2
 V valine              7.6         82           3
 W tryptophan          1.9         20           2
 Y tyrosine            3.7         40           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 12, member 4 isoform b 
SLC12A4               0.997   solute carrier family 12, member 4 isoform a 
SLC12A4               0.959   solute carrier family 12, member 4 isoform d 
SLC12A4               0.959   solute carrier family 12, member 4 isoform e 
SLC12A4               0.928   solute carrier family 12, member 4 isoform c 
SLC12A6               0.761   solute carrier family 12, member 6 isoform b 
SLC12A6               0.759   solute carrier family 12, member 6 isoform d 
SLC12A6               0.759   solute carrier family 12, member 6 isoform c 
SLC12A6               0.759   solute carrier family 12, member 6 isoform c 
SLC12A6               0.759   solute carrier family 12, member 6 isoform a 
SLC12A6               0.757   solute carrier family 12, member 6 isoform e 
SLC12A5               0.683   solute carrier family 12 (potassium-chloride transp...
SLC12A7               0.683   solute carrier family 12 (potassium/chloride transp...
SLC12A5               0.683   solute carrier family 12 (potassium-chloride transpo...
SLC12A9               0.110   solute carrier family 12 (potassium/chloride transpo...
SLC12A3               0.098   solute carrier family 12, member 3 isoform 3 
SLC12A3               0.097   solute carrier family 12, member 3 isoform 2 
SLC12A3               0.097   solute carrier family 12, member 3 isoform 1 
SLC12A2               0.096   solute carrier family 12 (sodium/potassium/chloride t...
SLC12A1               0.087   sodium potassium chloride cotransporter 2 
SLC12A8               0.036   solute carrier family 12, member 8 
SLC7A2                0.012   solute carrier family 7, member 2 isoform 1 
SLC7A2                0.010   solute carrier family 7, member 2 isoform 2 
SLC7A3                0.007   solute carrier family 7 (cationic amino acid transp...
SLC7A3                0.007   solute carrier family 7 (cationic amino acid transp...
SLC7A1                0.006   solute carrier family 7 (cationic amino acid transpor...
ADCY6                 0.006   adenylate cyclase 6 isoform b 
SLC7A14               0.005   solute carrier family 7 (cationic amino acid transp...
LOC100290485          0.005   PREDICTED: hypothetical protein XP_002346633 
SLC7A9                0.004   solute carrier family 7, member 9 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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