Guide to the Human Genome
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Search of human proteins with 5174623

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5174623 placental protein 11 precursor [Homo sapiens]
         (369 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5174623 placental protein 11 precursor [Homo sapiens]              776   0.0  
gi|67190163 proteoglycan 4 isoform A [Homo sapiens]                    60   4e-09
gi|189181720 proteoglycan 4 isoform B [Homo sapiens]                   59   7e-09
gi|189181722 proteoglycan 4 isoform C [Homo sapiens]                   58   1e-08
gi|189181724 proteoglycan 4 isoform D [Homo sapiens]                   57   2e-08
gi|170650661 ectonucleotide pyrophosphatase/phosphodiesterase 1 ...    46   5e-05
gi|88853069 vitronectin precursor [Homo sapiens]                       45   1e-04
gi|195947389 autotaxin isoform 3 preproprotein [Homo sapiens]          41   0.002
gi|91823602 autotaxin isoform 2 preproprotein [Homo sapiens]           41   0.002
gi|91823274 autotaxin isoform 1 preproprotein [Homo sapiens]           41   0.002
gi|111160296 ectonucleotide pyrophosphatase/phosphodiesterase 3 ...    40   0.003
gi|239747159 PREDICTED: hypothetical protein XP_002343930 [Homo ...    33   0.53 
gi|52353320 FSHD region gene 2 [Homo sapiens]                          33   0.53 
gi|118918407 spectrin repeat containing, nuclear envelope 2 isof...    32   0.70 
gi|118918403 spectrin repeat containing, nuclear envelope 2 isof...    32   0.70 
gi|10092665 sushi domain containing 2 [Homo sapiens]                   32   0.70 
gi|169217518 PREDICTED: FSHD region gene 2-like [Homo sapiens]         31   1.6  
gi|169218236 PREDICTED: FSHD region gene 2-like [Homo sapiens]         31   1.6  
gi|116812618 hypothetical protein LOC152940 [Homo sapiens]             31   1.6  
gi|11321601 phosphofructokinase, platelet [Homo sapiens]               31   2.0  
gi|124487405 FSHD region gene 2 family, member B [Homo sapiens]        31   2.0  
gi|185136049 FSHD region gene 2 family, member C [Homo sapiens]        30   3.5  
gi|110347568 centrosomal protein 152kDa [Homo sapiens]                 30   4.5  
gi|116875834 zinc finger protein 74 [Homo sapiens]                     30   4.5  
gi|8922077 adenosine deaminase, RNA-specific, B2 [Homo sapiens]        30   4.5  
gi|117956373 ArfGAP with GTPase domain, ankyrin repeat and PH do...    29   5.9  
gi|157671949 rearranged L-myc fusion [Homo sapiens]                    29   5.9  
gi|73858570 serpin peptidase inhibitor, clade G, member 1 precur...    29   7.7  
gi|73858568 serpin peptidase inhibitor, clade G, member 1 precur...    29   7.7  
gi|4505749 phosphofructokinase, muscle [Homo sapiens]                  29   7.7  

>gi|5174623 placental protein 11 precursor [Homo sapiens]
          Length = 369

 Score =  776 bits (2003), Expect = 0.0
 Identities = 369/369 (100%), Positives = 369/369 (100%)

Query: 1   MRACISLVLAVLCGLAWAEDHKESEPLPQLEEETEEALASNLYSAPTSCQGRCYEAFDKH 60
           MRACISLVLAVLCGLAWAEDHKESEPLPQLEEETEEALASNLYSAPTSCQGRCYEAFDKH
Sbjct: 1   MRACISLVLAVLCGLAWAEDHKESEPLPQLEEETEEALASNLYSAPTSCQGRCYEAFDKH 60

Query: 61  HQCHCNARCQEFGNCCKDFESLCSDHEVSHSSDAITKEEIQSISEKIYRADTNKAQKEDI 120
           HQCHCNARCQEFGNCCKDFESLCSDHEVSHSSDAITKEEIQSISEKIYRADTNKAQKEDI
Sbjct: 61  HQCHCNARCQEFGNCCKDFESLCSDHEVSHSSDAITKEEIQSISEKIYRADTNKAQKEDI 120

Query: 121 VLNSQNCISPSETRNQVDRCPKPLFTYVNEKLFSKPTYAAFINLLNNYQRATGHGEHFSA 180
           VLNSQNCISPSETRNQVDRCPKPLFTYVNEKLFSKPTYAAFINLLNNYQRATGHGEHFSA
Sbjct: 121 VLNSQNCISPSETRNQVDRCPKPLFTYVNEKLFSKPTYAAFINLLNNYQRATGHGEHFSA 180

Query: 181 QELAEQDAFLREIMKTAVMKELYSFLHHQNRYGSEQEFVDDLKNMWFGLYSRGNEEGDSS 240
           QELAEQDAFLREIMKTAVMKELYSFLHHQNRYGSEQEFVDDLKNMWFGLYSRGNEEGDSS
Sbjct: 181 QELAEQDAFLREIMKTAVMKELYSFLHHQNRYGSEQEFVDDLKNMWFGLYSRGNEEGDSS 240

Query: 241 GFEHVFSGEVKKGKVTGFHNWIRFYLEEKEGLVDYYSHIYDGPWDSYPDVLAMQFNWDGY 300
           GFEHVFSGEVKKGKVTGFHNWIRFYLEEKEGLVDYYSHIYDGPWDSYPDVLAMQFNWDGY
Sbjct: 241 GFEHVFSGEVKKGKVTGFHNWIRFYLEEKEGLVDYYSHIYDGPWDSYPDVLAMQFNWDGY 300

Query: 301 YKEVGSAFIGSSPEFEFALYSLCFIARPGKVCQLSLGGYPLAVRTYTWDKSTYGNGKKYI 360
           YKEVGSAFIGSSPEFEFALYSLCFIARPGKVCQLSLGGYPLAVRTYTWDKSTYGNGKKYI
Sbjct: 301 YKEVGSAFIGSSPEFEFALYSLCFIARPGKVCQLSLGGYPLAVRTYTWDKSTYGNGKKYI 360

Query: 361 ATAYIVSST 369
           ATAYIVSST
Sbjct: 361 ATAYIVSST 369


>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
          Length = 1404

 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 23/74 (31%), Positives = 45/74 (60%)

Query: 44  SAPTSCQGRCYEAFDKHHQCHCNARCQEFGNCCKDFESLCSDHEVSHSSDAITKEEIQSI 103
           +A  SC+GRC+E+F++  +C C+A+C+++  CC D+ES C++     S  +  K    S 
Sbjct: 65  TAELSCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAEVHNPTSPPSSKKAPPPSG 124

Query: 104 SEKIYRADTNKAQK 117
           + +  ++ T ++ K
Sbjct: 125 ASQTIKSTTKRSPK 138



 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 15/38 (39%), Positives = 24/38 (63%)

Query: 47 TSCQGRCYEAFDKHHQCHCNARCQEFGNCCKDFESLCS 84
          +SC GRC E + +   C+C+  CQ +  CC DF+ +C+
Sbjct: 28 SSCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCT 65


>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
          Length = 1363

 Score = 58.9 bits (141), Expect = 7e-09
 Identities = 23/74 (31%), Positives = 44/74 (59%)

Query: 44  SAPTSCQGRCYEAFDKHHQCHCNARCQEFGNCCKDFESLCSDHEVSHSSDAITKEEIQSI 103
           S   SC+GRC+E+F++  +C C+A+C+++  CC D+ES C++     S  +  K    S 
Sbjct: 24  SQELSCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAEVHNPTSPPSSKKAPPPSG 83

Query: 104 SEKIYRADTNKAQK 117
           + +  ++ T ++ K
Sbjct: 84  ASQTIKSTTKRSPK 97


>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
          Length = 1311

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 18/42 (42%), Positives = 33/42 (78%)

Query: 44  SAPTSCQGRCYEAFDKHHQCHCNARCQEFGNCCKDFESLCSD 85
           +A  SC+GRC+E+F++  +C C+A+C+++  CC D+ES C++
Sbjct: 65  TAELSCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAE 106



 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 15/38 (39%), Positives = 24/38 (63%)

Query: 47 TSCQGRCYEAFDKHHQCHCNARCQEFGNCCKDFESLCS 84
          +SC GRC E + +   C+C+  CQ +  CC DF+ +C+
Sbjct: 28 SSCAGRCGEGYSRDATCNCDYNCQHYMECCPDFKRVCT 65


>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
          Length = 1270

 Score = 57.4 bits (137), Expect = 2e-08
 Identities = 18/42 (42%), Positives = 32/42 (76%)

Query: 44 SAPTSCQGRCYEAFDKHHQCHCNARCQEFGNCCKDFESLCSD 85
          S   SC+GRC+E+F++  +C C+A+C+++  CC D+ES C++
Sbjct: 24 SQELSCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAE 65


>gi|170650661 ectonucleotide pyrophosphatase/phosphodiesterase 1
           [Homo sapiens]
          Length = 925

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)

Query: 48  SCQGRCYEAFDKHHQCHCNARCQEFGNCCKDFESLCSDHE 87
           SC+GRC+E       C C+A C E GNCC D++  C + E
Sbjct: 107 SCKGRCFER--TFGNCRCDAACVELGNCCLDYQETCIEPE 144



 Score = 30.4 bits (67), Expect = 2.6
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 6/54 (11%)

Query: 52  RCYEAFDKHHQCHCNARCQEFGNCCKDFESLCSDHEVSHSSDAITKEEIQSISE 105
           RC E       C C+  C++ G+CC ++ S+C   +      +  +E  +SI+E
Sbjct: 153 RCGEKRLTRSLCACSDDCKDKGDCCINYSSVCQGEK------SWVEEPCESINE 200


>gi|88853069 vitronectin precursor [Homo sapiens]
          Length = 478

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 8/78 (10%)

Query: 48  SCQGRCYEAFDKHHQCHCNARCQEFGNCCKDFESLCSDHEVSHSSDAITKEEIQSISEKI 107
           SC+GRC E F+   +C C+  C  + +CC D+ + C           +T+ ++ ++ E  
Sbjct: 23  SCKGRCTEGFNVDKKCQCDELCSYYQSCCTDYTAECKPQ--------VTRGDVFTMPEDE 74

Query: 108 YRADTNKAQKEDIVLNSQ 125
           Y    +  +K +  ++ Q
Sbjct: 75  YTVYDDGEEKNNATVHEQ 92


>gi|195947389 autotaxin isoform 3 preproprotein [Homo sapiens]
          Length = 888

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)

Query: 48 SCQGRCYEAFDKHH-QCHCNARCQEFGNCCKDFESLC 83
          SC+GRC+E  +     C C+  C+ + +CC DF+ LC
Sbjct: 58 SCKGRCFELQEAGPPDCRCDNLCKSYTSCCHDFDELC 94



 Score = 35.8 bits (81), Expect = 0.063
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)

Query: 52  RCYEAFDKHHQCHCNARCQEFGNCCKDFESLC--SDHEVSHSSDAITKEE 99
           RC E  ++ + CHC+  C   G+CC +++ +C    H V    + I   E
Sbjct: 107 RCGEVRNEENACHCSEDCLARGDCCTNYQVVCKGESHWVDDDCEEIKAAE 156


>gi|91823602 autotaxin isoform 2 preproprotein [Homo sapiens]
          Length = 863

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)

Query: 48 SCQGRCYEAFDKHH-QCHCNARCQEFGNCCKDFESLC 83
          SC+GRC+E  +     C C+  C+ + +CC DF+ LC
Sbjct: 58 SCKGRCFELQEAGPPDCRCDNLCKSYTSCCHDFDELC 94



 Score = 35.8 bits (81), Expect = 0.063
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)

Query: 52  RCYEAFDKHHQCHCNARCQEFGNCCKDFESLC--SDHEVSHSSDAITKEE 99
           RC E  ++ + CHC+  C   G+CC +++ +C    H V    + I   E
Sbjct: 107 RCGEVRNEENACHCSEDCLARGDCCTNYQVVCKGESHWVDDDCEEIKAAE 156


>gi|91823274 autotaxin isoform 1 preproprotein [Homo sapiens]
          Length = 915

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)

Query: 48 SCQGRCYEAFDKHH-QCHCNARCQEFGNCCKDFESLC 83
          SC+GRC+E  +     C C+  C+ + +CC DF+ LC
Sbjct: 58 SCKGRCFELQEAGPPDCRCDNLCKSYTSCCHDFDELC 94



 Score = 35.8 bits (81), Expect = 0.063
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)

Query: 52  RCYEAFDKHHQCHCNARCQEFGNCCKDFESLC--SDHEVSHSSDAITKEE 99
           RC E  ++ + CHC+  C   G+CC +++ +C    H V    + I   E
Sbjct: 107 RCGEVRNEENACHCSEDCLARGDCCTNYQVVCKGESHWVDDDCEEIKAAE 156


>gi|111160296 ectonucleotide pyrophosphatase/phosphodiesterase 3
          [Homo sapiens]
          Length = 875

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)

Query: 48 SCQGRCYEA-FDKHHQCHCNARCQEFGNCCKDFESLC 83
          SC+ +C++A F     C C+  C++ G+CC DFE  C
Sbjct: 53 SCRKKCFDASFRGLENCRCDVACKDRGDCCWDFEDTC 89



 Score = 29.6 bits (65), Expect = 4.5
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 52  RCYEAFDKHHQCHCNARCQEFGNCCKDFESLC 83
           RC E   +   C C+  C +  +CC D++S+C
Sbjct: 102 RCGETRLEASLCSCSDDCLQRKDCCADYKSVC 133


>gi|239747159 PREDICTED: hypothetical protein XP_002343930 [Homo
           sapiens]
          Length = 278

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 22/86 (25%), Positives = 35/86 (40%)

Query: 24  SEPLPQLEEETEEALASNLYSAPTSCQGRCYEAFDKHHQCHCNARCQEFGNCCKDFESLC 83
           SEP P  E   E  L +   +A +  +   Y    +  +      CQ+    C + E   
Sbjct: 61  SEPNPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRKMSSKDSCQDTAGNCPEKECSL 120

Query: 84  SDHEVSHSSDAITKEEIQSISEKIYR 109
           S ++ S SS A+   EIQ   +  +R
Sbjct: 121 SLNKKSRSSTAVHNSEIQETCDAHHR 146


>gi|52353320 FSHD region gene 2 [Homo sapiens]
          Length = 278

 Score = 32.7 bits (73), Expect = 0.53
 Identities = 22/86 (25%), Positives = 35/86 (40%)

Query: 24  SEPLPQLEEETEEALASNLYSAPTSCQGRCYEAFDKHHQCHCNARCQEFGNCCKDFESLC 83
           SEP P  E   E  L +   +A +  +   Y    +  +      CQ+    C + E   
Sbjct: 61  SEPNPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRKMSSKDSCQDTAGNCPEKECSL 120

Query: 84  SDHEVSHSSDAITKEEIQSISEKIYR 109
           S ++ S SS A+   EIQ   +  +R
Sbjct: 121 SLNKKSRSSTAVHNSEIQETCDAHHR 146


>gi|118918407 spectrin repeat containing, nuclear envelope 2 isoform 5
            [Homo sapiens]
          Length = 6907

 Score = 32.3 bits (72), Expect = 0.70
 Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 4/66 (6%)

Query: 98   EEIQSISEKIYRADTNKAQKEDIVLNSQNCISPSETRNQVDRCPKPL----FTYVNEKLF 153
            EE+QSI +K      N  +K  I  +    I P+E  +QV+ C K L        NE L 
Sbjct: 3622 EELQSILKKGKLTFENIMEKLRIKYSEMYTIVPAEIESQVEECRKALEDIDEKISNEVLK 3681

Query: 154  SKPTYA 159
            S P+YA
Sbjct: 3682 SSPSYA 3687


>gi|118918403 spectrin repeat containing, nuclear envelope 2 isoform 1
            [Homo sapiens]
          Length = 6885

 Score = 32.3 bits (72), Expect = 0.70
 Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 4/66 (6%)

Query: 98   EEIQSISEKIYRADTNKAQKEDIVLNSQNCISPSETRNQVDRCPKPL----FTYVNEKLF 153
            EE+QSI +K      N  +K  I  +    I P+E  +QV+ C K L        NE L 
Sbjct: 3622 EELQSILKKGKLTFENIMEKLRIKYSEMYTIVPAEIESQVEECRKALEDIDEKISNEVLK 3681

Query: 154  SKPTYA 159
            S P+YA
Sbjct: 3682 SSPSYA 3687


>gi|10092665 sushi domain containing 2 [Homo sapiens]
          Length = 822

 Score = 32.3 bits (72), Expect = 0.70
 Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 3/39 (7%)

Query: 45 APTSCQGRCYEAFDKHHQCHCNARCQEFGNCCKDFESLC 83
          A  SC  RC  A D    C C+  C   G CC DF   C
Sbjct: 27 AQESCSMRC-GALDG--PCSCHPTCSGLGTCCLDFRDFC 62


>gi|169217518 PREDICTED: FSHD region gene 2-like [Homo sapiens]
          Length = 282

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 21/86 (24%), Positives = 35/86 (40%)

Query: 24  SEPLPQLEEETEEALASNLYSAPTSCQGRCYEAFDKHHQCHCNARCQEFGNCCKDFESLC 83
           SEP P  E   E  L +   +A +  +   Y    +  +      CQ+    C + E   
Sbjct: 62  SEPNPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRKISSKDSCQDRAGNCPEEECSL 121

Query: 84  SDHEVSHSSDAITKEEIQSISEKIYR 109
           + ++ S SS A+   EIQ   +  +R
Sbjct: 122 TLNKKSRSSTAVHNSEIQETCDAHHR 147


>gi|169218236 PREDICTED: FSHD region gene 2-like [Homo sapiens]
          Length = 282

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 21/86 (24%), Positives = 35/86 (40%)

Query: 24  SEPLPQLEEETEEALASNLYSAPTSCQGRCYEAFDKHHQCHCNARCQEFGNCCKDFESLC 83
           SEP P  E   E  L +   +A +  +   Y    +  +      CQ+    C + E   
Sbjct: 62  SEPNPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRKISSKDSCQDRAGNCPEEECSL 121

Query: 84  SDHEVSHSSDAITKEEIQSISEKIYR 109
           + ++ S SS A+   EIQ   +  +R
Sbjct: 122 TLNKKSRSSTAVHNSEIQETCDAHHR 147


>gi|116812618 hypothetical protein LOC152940 [Homo sapiens]
          Length = 186

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 22/111 (19%)

Query: 199 MKELYSFLHHQNRYGSEQ----EFVDDLKNMWFGLYSRGNEEGDSSGFEHVFSGEV---- 250
           +K+    +H    Y  EQ    E   DL+ +W    +R       + ++H +  E+    
Sbjct: 26  IKDYLPKIHQHTSYVGEQHLALEKTGDLRYLWRPASNRSLP----AKYKHEYVSEIGWRI 81

Query: 251 -------KKGKVTGFHNWIRFYLEEKEGLVDYYSHIYDGPWDSYPDVLAMQ 294
                  K    +GFH  I+ Y E  +  +D  +H Y  PW   P VL MQ
Sbjct: 82  PQYNFINKSRLGSGFH--IK-YEELSQASLDSITHRYQNPWQPKPHVLDMQ 129


>gi|11321601 phosphofructokinase, platelet [Homo sapiens]
          Length = 784

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 18/102 (17%)

Query: 213 GSEQEFVDDLKNMW--FGLYSRGNEEGDSSGFEHVFSGEVKKGKVTGFHNWIRFYLEEKE 270
           GS ++F++ L       G+ + G   GD+ G        V+ G   G    + F  E  +
Sbjct: 11  GSLRKFLEHLSGAGKAIGVLTSG---GDAQGMNAAVRAVVRMGIYVGAK--VYFIYEGYQ 65

Query: 271 GLVDYYSHIYDGPWDSYPDVLAMQFNWDGYYKEVGSAFIGSS 312
           G+VD  S+I +  W+S   +L           +VG   IGS+
Sbjct: 66  GMVDGGSNIAEADWESVSSIL-----------QVGGTIIGSA 96


>gi|124487405 FSHD region gene 2 family, member B [Homo sapiens]
          Length = 278

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 21/86 (24%), Positives = 34/86 (39%)

Query: 24  SEPLPQLEEETEEALASNLYSAPTSCQGRCYEAFDKHHQCHCNARCQEFGNCCKDFESLC 83
           SEP P  E   E  L +   +A +  +   Y    +  +      CQ+    C + E   
Sbjct: 61  SEPNPNKENSEETKLKAGNSTAGSEPESSSYRENCRKRKMSSKDSCQDTAGNCPEKECSL 120

Query: 84  SDHEVSHSSDAITKEEIQSISEKIYR 109
           S ++ S SS  +   EIQ   +  +R
Sbjct: 121 SLNKKSRSSTPVHNSEIQETCDAHHR 146


>gi|185136049 FSHD region gene 2 family, member C [Homo sapiens]
          Length = 282

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 20/89 (22%), Positives = 37/89 (41%)

Query: 24  SEPLPQLEEETEEALASNLYSAPTSCQGRCYEAFDKHHQCHCNARCQEFGNCCKDFESLC 83
           S+P P  E   E  L +   +A +  +   Y+   +  +      CQ+    C + E   
Sbjct: 62  SDPNPNKENSEETKLKAGNSTAGSEPESSSYQENCRKRKISSKDICQDRAGNCPEEECNL 121

Query: 84  SDHEVSHSSDAITKEEIQSISEKIYRADT 112
           + ++ S SS A+   EIQ   +  +R  +
Sbjct: 122 TLNKKSRSSTAVHNSEIQETCDAHHRGSS 150


>gi|110347568 centrosomal protein 152kDa [Homo sapiens]
          Length = 1654

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 5/72 (6%)

Query: 6   SLVLAVLCGLAWAEDHKESE---PLPQLEEETEEALASNLYSAPTSCQGRCYEAFDKHHQ 62
           SL     CG  W E+  ++E   P+   EE  +E  +   YS P+ C+        ++ +
Sbjct: 94  SLYAGEKCGNVWEENRSKTEDRHPVYHPEEGGDEGGSG--YSPPSKCEQTDLYHLPENFR 151

Query: 63  CHCNARCQEFGN 74
            + N + QEF N
Sbjct: 152 PYTNGQKQEFNN 163


>gi|116875834 zinc finger protein 74 [Homo sapiens]
          Length = 644

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 9/56 (16%)

Query: 46  PTSCQGRCYEAFD------KHHQCHCNARCQEFGNCCKDF--ESLCSDHEVSHSSD 93
           P  C G C +AF+      +HH+ H   +  + G+C K F   S  + HE  HS D
Sbjct: 359 PYRC-GECGKAFNQRTHLTRHHRIHTGEKPYQCGSCGKAFTCHSSLTVHEKIHSGD 413


>gi|8922077 adenosine deaminase, RNA-specific, B2 [Homo sapiens]
          Length = 739

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 34/125 (27%), Positives = 46/125 (36%), Gaps = 14/125 (11%)

Query: 175 GEHFSAQELAEQDAFLREIMKTAVMKELYSFLH---HQNRYGSEQEFVDDLK-------- 223
           GEH S Q L   D     + + A +  LY+ L     + R  SE+     LK        
Sbjct: 418 GEHLSDQGLVVNDCHAEVVARRAFLHFLYTQLELHLSKRREDSERSIFVRLKEGGYRLRE 477

Query: 224 NMWFGLYSRGNEEGDS---SGFEHVFSGEVKKGKVTGFHNWIRFYLEEKEGLVDYYSHIY 280
           N+ F LY   +  GD+   S +E        K  V  F   +R  +E  EG V       
Sbjct: 478 NILFHLYVSTSPCGDARLHSPYEITTDLHSSKHLVRKFRGHLRTKIESGEGTVPVRGPSA 537

Query: 281 DGPWD 285
              WD
Sbjct: 538 VQTWD 542


>gi|117956373 ArfGAP with GTPase domain, ankyrin repeat and PH
           domain 7 [Homo sapiens]
          Length = 663

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 8/77 (10%)

Query: 119 DIVLNSQNCISPSETRNQVDRCPKPLFTYVNEKLFSKPTYAAFINLLNNYQ--RATGHGE 176
           D  L    C SPS +   + +   P   + N+K   K          NN+    ATG   
Sbjct: 345 DTGLGDSICFSPSISSTTIPKLNPPPSPHANKKKHLKKKST------NNFMIVSATGQTW 398

Query: 177 HFSAQELAEQDAFLREI 193
           HF A    E+DA+++ I
Sbjct: 399 HFEATTYEERDAWVQAI 415


>gi|157671949 rearranged L-myc fusion [Homo sapiens]
          Length = 1914

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 26/131 (19%), Positives = 53/131 (40%), Gaps = 18/131 (13%)

Query: 69  CQEFGNCCKDFESL--CSDHEVSHSSDAITKEEIQSISEKIYRADTNKAQKEDIVLNSQN 126
           C E  N   D E+     ++  S+SSD ++     S++E++     +    +D++L+++ 
Sbjct: 872 CAESANSQIDTETAENLKENSDSNSSDQLSHSSSASMNEELIDTLDHSETMQDVLLSNEK 931

Query: 127 CISPSETRNQVDRCPKPLFTYVNEKLFSKPTYAAFINLLNNYQRATG--------HGEHF 178
              PS  +   ++C      +   K         F    + Y+ A G        H  HF
Sbjct: 932 VFGPSSLK---EKCSSMAVCFDGTKF-----TCGFDGCGSTYKNARGMQKHLRKVHPYHF 983

Query: 179 SAQELAEQDAF 189
             +++  +D F
Sbjct: 984 KPKKIKTKDLF 994


>gi|73858570 serpin peptidase inhibitor, clade G, member 1 precursor
           [Homo sapiens]
          Length = 500

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 73  GNCCKDFESLCSDHEVSHSSDAITKEEIQSISEKIYRA 110
           G+ C    +LCSD E SHS++A+  + +   S K+Y A
Sbjct: 120 GSFCPGPVTLCSDLE-SHSTEAVLGDALVDFSLKLYHA 156


>gi|73858568 serpin peptidase inhibitor, clade G, member 1 precursor
           [Homo sapiens]
          Length = 500

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 73  GNCCKDFESLCSDHEVSHSSDAITKEEIQSISEKIYRA 110
           G+ C    +LCSD E SHS++A+  + +   S K+Y A
Sbjct: 120 GSFCPGPVTLCSDLE-SHSTEAVLGDALVDFSLKLYHA 156


>gi|4505749 phosphofructokinase, muscle [Homo sapiens]
          Length = 780

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 237 GDSSGFEHVFSGEVKKGKVTGFHNWIRFYLEEKEGLVDYYSHIYDGPWDSYPDVLAM 293
           GD+ G        V+ G  TG    + F  E  +GLVD   HI +  W+S   +L +
Sbjct: 25  GDAQGMNAAVRAVVRVGIFTGAR--VFFVHEGYQGLVDGGDHIKEATWESVSMMLQL 79


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.133    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,271,020
Number of Sequences: 37866
Number of extensions: 720680
Number of successful extensions: 1966
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1933
Number of HSP's gapped (non-prelim): 43
length of query: 369
length of database: 18,247,518
effective HSP length: 104
effective length of query: 265
effective length of database: 14,309,454
effective search space: 3792005310
effective search space used: 3792005310
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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