Guide to the Human Genome
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Name: ADARB2 Sequence: fasta or formatted (739aa) NCBI GI: 8922077
Description:

adenosine deaminase, RNA-specific, B2

Referenced in:

RNA Editing and Other RNA Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         69           2
 C cysteine            1.6         12           1
 D aspartate           3.5         26           3
 E glutamate           4.7         35           2
 F phenylalanine       3.4         25           1
 G glycine             9.3         69           3
 H histidine           3.4         25           2
 I isoleucine          2.0         15           2
 K lysine              5.0         37           3
 L leucine            11.0         81           2
 M methionine          1.8         13           1
 N asparagine          2.2         16           1
 P proline             6.5         48           3
 Q glutamine           4.5         33           3
 R arginine            9.1         67           6
 S serine              7.8         58           2
 T threonine           5.5         41           2
 V valine              6.8         50           2
 W tryptophan          0.9          7           1
 Y tyrosine            1.6         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   adenosine deaminase, RNA-specific, B2 
ADARB1                0.476   RNA-specific adenosine deaminase B1 isoform 1 
ADARB1                0.464   RNA-specific adenosine deaminase B1 isoform 2 
ADARB1                0.452   RNA-specific adenosine deaminase B1 isoform 7 [Homo...
ADARB1                0.439   RNA-specific adenosine deaminase B1 isoform 3 
ADAR                  0.159   adenosine deaminase, RNA-specific isoform c 
ADAR                  0.159   adenosine deaminase, RNA-specific isoform b 
ADAR                  0.154   adenosine deaminase, RNA-specific isoform d 
ADAR                  0.154   adenosine deaminase, RNA-specific isoform a 
ADAD1                 0.091   adenosine deaminase domain containing 1 (testis-spe...
ADAD1                 0.091   adenosine deaminase domain containing 1 (testis-spec...
ADAD1                 0.081   adenosine deaminase domain containing 1 (testis-spe...
ADAD2                 0.075   adenosine deaminase domain containing 2 isoform 2 [...
ADAD2                 0.072   adenosine deaminase domain containing 2 isoform 1 [...
ILF3                  0.071   interleukin enhancer binding factor 3 isoform c [Hom...
ILF3                  0.071   interleukin enhancer binding factor 3 isoform b [Hom...
ILF3                  0.071   interleukin enhancer binding factor 3 isoform a [Hom...
ILF3                  0.071   interleukin enhancer binding factor 3 isoform e [Ho...
ILF3                  0.071   interleukin enhancer binding factor 3 isoform d [Ho...
STRBP                 0.066   spermatid perinuclear RNA binding protein 
ADAT1                 0.033   adenosine deaminase, tRNA-specific 1 
TARBP2                0.017   TAR RNA binding protein 2 isoform b 
TARBP2                0.017   TAR RNA binding protein 2 isoform a 
TARBP2                0.017   TAR RNA binding protein 2 isoform b 
STAU2                 0.016   staufen homolog 2 
STAU1                 0.013   staufen isoform a 
STAU1                 0.013   staufen isoform b 
STAU1                 0.013   staufen isoform a 
STAU1                 0.013   staufen isoform a 
STAU1                 0.012   staufen isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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