Guide to the Human Genome
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Name: C4orf45 Sequence: fasta or formatted (186aa) NCBI GI: 116812618
Description:

hypothetical protein LOC152940

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         10           1
 C cysteine            0.5          1           1
 D aspartate           3.8          7           1
 E glutamate           4.3          8           2
 F phenylalanine       2.7          5           1
 G glycine             4.3          8           1
 H histidine           4.8          9           1
 I isoleucine          4.8          9           1
 K lysine             11.3         21           2
 L leucine             7.5         14           1
 M methionine          2.2          4           1
 N asparagine          2.7          5           1
 P proline             7.5         14           2
 Q glutamine           6.5         12           1
 R arginine            5.9         11           1
 S serine             10.2         19           2
 T threonine           4.3          8           2
 V valine              3.2          6           1
 W tryptophan          2.7          5           1
 Y tyrosine            5.4         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC152940 
SRBD1                 0.025   S1 RNA binding domain 1 
HSPA4                 0.016   heat shock 70kDa protein 4 
P11                   0.016   placental protein 11 precursor 
CHD7                  0.008   chromodomain helicase DNA binding protein 7 
ABCB8                 0.008   ATP-binding cassette, sub-family B, member 8 
SCN8A                 0.008   sodium channel, voltage gated, type VIII, alpha [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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