Guide to the Human Genome
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Name: LOC651959 Sequence: fasta or formatted (282aa) NCBI GI: 169218236
Description:

PREDICTED: FSHD region gene 2-like

Not currently referenced in the text

Other entries for this name:
alt mRNA {282aa} PREDICTED: FSHD region gene 2-like
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         23           2
 C cysteine            3.9         11           1
 D aspartate           3.5         10           1
 E glutamate           8.5         24           3
 F phenylalanine       2.1          6           1
 G glycine             6.4         18           1
 H histidine           3.2          9           2
 I isoleucine          2.1          6           1
 K lysine              6.7         19           2
 L leucine             6.7         19           2
 M methionine          1.1          3           1
 N asparagine          3.2          9           1
 P proline             6.7         19           2
 Q glutamine           7.1         20           2
 R arginine            5.3         15           1
 S serine             12.8         36           3
 T threonine           6.7         19           1
 V valine              3.5         10           1
 W tryptophan          0.7          2           1
 Y tyrosine            1.4          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: FSHD region gene 2-like 
LOC651959             1.000   PREDICTED: FSHD region gene 2-like 
FRG2C                 0.964   FSHD region gene 2 family, member C 
FRG2B                 0.931   FSHD region gene 2 family, member B 
LOC100288255          0.926   PREDICTED: hypothetical protein XP_002343930 
FRG2                  0.926   FSHD region gene 2 
LOC100288801          0.429   PREDICTED: hypothetical protein XP_002342402 
LOC100128827          0.187   PREDICTED: similar to FSHD region gene 2 family, me...
LOC100128827          0.187   PREDICTED: similar to FSHD region gene 2 family, me...
LOC100128827          0.187   PREDICTED: similar to FSHD region gene 2 family, me...
RSRC2                 0.029   arginine/serine-rich coiled-coil 2 isoform b 
RSRC2                 0.029   arginine/serine-rich coiled-coil 2 isoform a 
CIR1                  0.022   CBF1 interacting corepressor 
ZRANB2                0.020   zinc finger protein 265 isoform 2 
ATRX                  0.018   transcriptional regulator ATRX isoform 2 
ATRX                  0.018   transcriptional regulator ATRX isoform 1 
ZRANB2                0.018   zinc finger protein 265 isoform 1 
ZNF445                0.018   zinc finger protein 445 
GPATCH8               0.018   G patch domain containing 8 
AP3B1                 0.018   adaptor-related protein complex 3, beta 1 subunit [H...
REV3L                 0.018   DNA polymerase zeta 
PPIG                  0.018   peptidylprolyl isomerase G 
DMP1                  0.016   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.016   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
LOC643446             0.016   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.016   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.016   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.016   PREDICTED: similar to ribonucleic acid binding prote...
CYLC1                 0.016   cylicin, basic protein of sperm head cytoskeleton 1...
AFF4                  0.016   ALL1 fused gene from 5q31 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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