Guide to the Human Genome
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Name: P11 Sequence: fasta or formatted (369aa) NCBI GI: 5174623
Description:

placental protein 11 precursor

Referenced in:

Ovary, Uterus and Placenta

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         26           2
 C cysteine            3.8         14           2
 D aspartate           4.9         18           2
 E glutamate           9.5         35           3
 F phenylalanine       5.4         20           1
 G glycine             6.2         23           2
 H histidine           3.5         13           2
 I isoleucine          4.1         15           1
 K lysine              6.0         22           2
 L leucine             7.6         28           2
 M methionine          1.4          5           1
 N asparagine          4.6         17           2
 P proline             3.3         12           1
 Q glutamine           4.1         15           1
 R arginine            3.5         13           1
 S serine              8.9         33           2
 T threonine           4.1         15           1
 V valine              4.6         17           1
 W tryptophan          1.6          6           1
 Y tyrosine            6.0         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   placental protein 11 precursor 
PRG4                  0.047   proteoglycan 4 isoform A 
PRG4                  0.045   proteoglycan 4 isoform B 
PRG4                  0.044   proteoglycan 4 isoform C 
PRG4                  0.043   proteoglycan 4 isoform D 
ENPP1                 0.028   ectonucleotide pyrophosphatase/phosphodiesterase 1 ...
VTN                   0.027   vitronectin precursor 
ENPP2                 0.021   autotaxin isoform 3 preproprotein 
ENPP2                 0.021   autotaxin isoform 2 preproprotein 
ENPP2                 0.021   autotaxin isoform 1 preproprotein 
ENPP3                 0.020   ectonucleotide pyrophosphatase/phosphodiesterase 3 ...
LOC100288255          0.011   PREDICTED: hypothetical protein XP_002343930 
FRG2                  0.011   FSHD region gene 2 
SYNE2                 0.009   spectrin repeat containing, nuclear envelope 2 isof...
SYNE2                 0.009   spectrin repeat containing, nuclear envelope 2 isof...
SUSD2                 0.009   sushi domain containing 2 
LOC651959             0.008   PREDICTED: FSHD region gene 2-like 
LOC651959             0.008   PREDICTED: FSHD region gene 2-like 
C4orf45               0.008   hypothetical protein LOC152940 
PFKP                  0.008   phosphofructokinase, platelet 
FRG2B                 0.008   FSHD region gene 2 family, member B 
FRG2C                 0.007   FSHD region gene 2 family, member C 
CEP152                0.007   centrosomal protein 152kDa 
ZNF74                 0.007   zinc finger protein 74 
ADARB2                0.007   adenosine deaminase, RNA-specific, B2 
AGAP7                 0.005   ArfGAP with GTPase domain, ankyrin repeat and PH do...
RLF                   0.005   rearranged L-myc fusion 
SERPING1              0.005   serpin peptidase inhibitor, clade G, member 1 precur...
SERPING1              0.005   serpin peptidase inhibitor, clade G, member 1 precur...
PFKM                  0.005   phosphofructokinase, muscle 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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