BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|51558688 Bcl2 modifying factor isoform bmf-1 [Homo sapiens] (184 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|15723378 Bcl2 modifying factor isoform bmf-1 [Homo sapiens] 388 e-108 gi|51558688 Bcl2 modifying factor isoform bmf-1 [Homo sapiens] 388 e-108 gi|51558701 Bcl2 modifying factor isoform bmf-2 [Homo sapiens] 334 3e-92 gi|51558704 Bcl2 modifying factor isoform bmf-3 [Homo sapiens] 205 2e-53 gi|55956910 meningioma 1 [Homo sapiens] 32 0.31 gi|144226234 metastasis suppressor 1 [Homo sapiens] 30 0.90 gi|54607014 TBC1 domain family, member 25 [Homo sapiens] 30 1.2 gi|4758010 clock [Homo sapiens] 30 1.5 gi|46370073 GRB2-associated binding protein 1 isoform b [Homo sa... 29 2.0 gi|46370071 GRB2-associated binding protein 1 isoform a [Homo sa... 29 2.0 gi|239756880 PREDICTED: hypothetical protein [Homo sapiens] 29 2.0 gi|239751374 PREDICTED: hypothetical protein XP_002347830 [Homo ... 29 2.0 gi|81295809 pericentrin [Homo sapiens] 29 2.0 gi|57242761 receptor (TNFRSF)-interacting serine-threonine kinas... 28 3.4 gi|34996489 pleckstrin homology domain interacting protein [Homo... 28 3.4 gi|116292168 KRAB A domain containing 1 [Homo sapiens] 28 3.4 gi|172072684 PR domain containing 1, with ZNF domain isoform 1 [... 28 4.5 gi|33946274 PR domain containing 1, with ZNF domain isoform 2 [H... 28 4.5 gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] 28 4.5 gi|153792230 hypothetical protein LOC57670 [Homo sapiens] 28 4.5 gi|51873055 fibulin 2 isoform b precursor [Homo sapiens] 28 4.5 gi|51873053 fibulin 2 isoform a precursor [Homo sapiens] 28 4.5 gi|149192855 HLA-B associated transcript 2-like [Homo sapiens] 28 4.5 gi|169203191 PREDICTED: hypothetical protein [Homo sapiens] 28 5.8 gi|169203681 PREDICTED: hypothetical protein [Homo sapiens] 28 5.8 gi|169202107 PREDICTED: hypothetical protein [Homo sapiens] 28 5.8 gi|4809279 annexin VII isoform 2 [Homo sapiens] 28 5.8 gi|38045915 pregnancy-associated plasma protein A preproprotein ... 27 7.6 gi|239752280 PREDICTED: similar to family with sequence similari... 27 7.6 gi|210032463 family with sequence similarity 48, member B2 [Homo... 27 7.6 >gi|15723378 Bcl2 modifying factor isoform bmf-1 [Homo sapiens] Length = 184 Score = 388 bits (997), Expect = e-108 Identities = 184/184 (100%), Positives = 184/184 (100%) Query: 1 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL 60 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL Sbjct: 1 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL 60 Query: 61 RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQP 120 RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQP Sbjct: 61 RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQP 120 Query: 121 PEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVWWQILLFLHNLALNGEENRNG 180 PEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVWWQILLFLHNLALNGEENRNG Sbjct: 121 PEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVWWQILLFLHNLALNGEENRNG 180 Query: 181 AGPR 184 AGPR Sbjct: 181 AGPR 184 >gi|51558688 Bcl2 modifying factor isoform bmf-1 [Homo sapiens] Length = 184 Score = 388 bits (997), Expect = e-108 Identities = 184/184 (100%), Positives = 184/184 (100%) Query: 1 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL 60 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL Sbjct: 1 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL 60 Query: 61 RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQP 120 RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQP Sbjct: 61 RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQP 120 Query: 121 PEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVWWQILLFLHNLALNGEENRNG 180 PEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVWWQILLFLHNLALNGEENRNG Sbjct: 121 PEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVWWQILLFLHNLALNGEENRNG 180 Query: 181 AGPR 184 AGPR Sbjct: 181 AGPR 184 >gi|51558701 Bcl2 modifying factor isoform bmf-2 [Homo sapiens] Length = 163 Score = 334 bits (856), Expect = 3e-92 Identities = 163/184 (88%), Positives = 163/184 (88%), Gaps = 21/184 (11%) Query: 1 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL 60 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL Sbjct: 1 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL 60 Query: 61 RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQP 120 RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQP Sbjct: 61 RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQP 120 Query: 121 PEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVWWQILLFLHNLALNGEENRNG 180 PEGQWQHQAE HQQNQNRVWWQILLFLHNLALNGEENRNG Sbjct: 121 PEGQWQHQAE---------------------HQQNQNRVWWQILLFLHNLALNGEENRNG 159 Query: 181 AGPR 184 AGPR Sbjct: 160 AGPR 163 >gi|51558704 Bcl2 modifying factor isoform bmf-3 [Homo sapiens] Length = 129 Score = 205 bits (521), Expect = 2e-53 Identities = 104/130 (80%), Positives = 107/130 (82%), Gaps = 5/130 (3%) Query: 1 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL 60 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL Sbjct: 1 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL 60 Query: 61 RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQP 120 RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFY A P S P Sbjct: 61 RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYAPAE-----PKSCVVADPPLPAQ 115 Query: 121 PEGQWQHQAE 130 P +W+ + E Sbjct: 116 PCFEWRREQE 125 >gi|55956910 meningioma 1 [Homo sapiens] Length = 1320 Score = 32.0 bits (71), Expect = 0.31 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 5/74 (6%) Query: 105 PLPASFPAVLPIGEQPPEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVWWQIL 164 P+P SFP+ P+ P+ Q Q + Q ++ Q Q + QQ QQ QN Sbjct: 501 PVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAA----- 555 Query: 165 LFLHNLALNGEENR 178 L + +A ++ R Sbjct: 556 LMIKQMASRNQQQR 569 >gi|144226234 metastasis suppressor 1 [Homo sapiens] Length = 755 Score = 30.4 bits (67), Expect = 0.90 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Query: 74 SPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAV 113 SP SPS G P GVT P ++ G A PLP P++ Sbjct: 644 SPESPSVGEG-PQGVTSMPSSMWSGQASVNPPLPGPKPSI 682 >gi|54607014 TBC1 domain family, member 25 [Homo sapiens] Length = 688 Score = 30.0 bits (66), Expect = 1.2 Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 22/119 (18%) Query: 7 VEELEDDVFQPEDGEPVTQ---PGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGLRPT 63 +++L D++ D P+ Q P +L+S+ ++ LL+ P L F P+ Sbjct: 510 LQQLRDNMGSRRD--PLVQLPHPAALISSKSLSEPLLNSPDPLLSSFSHPDSPSSSSPPS 567 Query: 64 SQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQPPE 122 +QE T ++ SP +M G ++P + S P V P+G PP+ Sbjct: 568 TQEASPTGDMAVGSP---LMQEVGSPKDPGK--------------SLPPVPPMGLPPPQ 609 >gi|4758010 clock [Homo sapiens] Length = 846 Score = 29.6 bits (65), Expect = 1.5 Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 11/77 (14%) Query: 65 QEDKATQTLSPASPSQGVMLPCGVTEEPQ------RLFYGNAGYRLPLPASFPAVLPIGE 118 Q + Q S PSQ + T+ PQ RL +GN +L L A+FP Sbjct: 760 QSSQEQQLTSVQQPSQAQL-----TQPPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFP 814 Query: 119 QPPEGQWQHQAEVQIAR 135 Q Q Q Q + Q++R Sbjct: 815 QSHHQQHQSQQQQQLSR 831 >gi|46370073 GRB2-associated binding protein 1 isoform b [Homo sapiens] Length = 694 Score = 29.3 bits (64), Expect = 2.0 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 24/84 (28%) Query: 15 FQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGLRPTSQEDKATQTLS 74 F P + +PV PGS L Q+ D PL+ + P P++Q D ++ TL Sbjct: 117 FNPTEEDPVKPPGSSL------QAPADLPLA-INTAP----------PSTQADSSSATLP 159 Query: 75 PASPSQGVMLP-----CGVTEEPQ 93 P P Q + +P G+ E+PQ Sbjct: 160 P--PYQLINVPPHLETLGIQEDPQ 181 >gi|46370071 GRB2-associated binding protein 1 isoform a [Homo sapiens] Length = 724 Score = 29.3 bits (64), Expect = 2.0 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 24/84 (28%) Query: 15 FQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGLRPTSQEDKATQTLS 74 F P + +PV PGS L Q+ D PL+ + P P++Q D ++ TL Sbjct: 117 FNPTEEDPVKPPGSSL------QAPADLPLA-INTAP----------PSTQADSSSATLP 159 Query: 75 PASPSQGVMLP-----CGVTEEPQ 93 P P Q + +P G+ E+PQ Sbjct: 160 P--PYQLINVPPHLETLGIQEDPQ 181 >gi|239756880 PREDICTED: hypothetical protein [Homo sapiens] Length = 376 Score = 29.3 bits (64), Expect = 2.0 Identities = 14/31 (45%), Positives = 18/31 (58%) Query: 102 YRLPLPASFPAVLPIGEQPPEGQWQHQAEVQ 132 Y L LP S PAVLP PP+ + + A V+ Sbjct: 94 YSLELPLSHPAVLPTTYSPPKAERKRLAGVE 124 >gi|239751374 PREDICTED: hypothetical protein XP_002347830 [Homo sapiens] Length = 376 Score = 29.3 bits (64), Expect = 2.0 Identities = 14/31 (45%), Positives = 18/31 (58%) Query: 102 YRLPLPASFPAVLPIGEQPPEGQWQHQAEVQ 132 Y L LP S PAVLP PP+ + + A V+ Sbjct: 94 YSLELPLSHPAVLPTTYSPPKAERKRLAGVE 124 >gi|81295809 pericentrin [Homo sapiens] Length = 3336 Score = 29.3 bits (64), Expect = 2.0 Identities = 14/45 (31%), Positives = 23/45 (51%) Query: 114 LPIGEQPPEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNR 158 L G PPE QW +++R+LQ + +F R V+ ++ R Sbjct: 1910 LAAGAAPPELQWLRAQCARLSRQLQVLHQRFLRCQVELDRRQARR 1954 >gi|57242761 receptor (TNFRSF)-interacting serine-threonine kinase 1 [Homo sapiens] Length = 671 Score = 28.5 bits (62), Expect = 3.4 Identities = 15/37 (40%), Positives = 18/37 (48%) Query: 66 EDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGY 102 E K T S AS V P G+T +PQ L+ N Y Sbjct: 433 EGKGTAYSSAASHGNAVHQPSGLTSQPQVLYQNNGLY 469 >gi|34996489 pleckstrin homology domain interacting protein [Homo sapiens] Length = 1821 Score = 28.5 bits (62), Expect = 3.4 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%) Query: 5 QCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPL 44 QC EEL + +FQ ED EP QP LL + + ++D P+ Sbjct: 1324 QC-EELLNLIFQCEDSEPFRQPVDLLEYPDY-RDIIDTPM 1361 >gi|116292168 KRAB A domain containing 1 [Homo sapiens] Length = 1030 Score = 28.5 bits (62), Expect = 3.4 Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 7/65 (10%) Query: 58 PGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPI- 116 P P ++Q L ++PS C L G++ PLP PA LP+ Sbjct: 919 PPAEPPGLHCSSSQQLLSSTPS------CHAAPPAHPLLAHTGGHQSPLPPLVPAALPLQ 972 Query: 117 GEQPP 121 G PP Sbjct: 973 GASPP 977 >gi|172072684 PR domain containing 1, with ZNF domain isoform 1 [Homo sapiens] Length = 825 Score = 28.1 bits (61), Expect = 4.5 Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 2/73 (2%) Query: 51 PLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYG--NAGYRLPLPA 108 P+ P S D++ ++ SP S + P G + R Y NA Y Sbjct: 328 PIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVGPGSQEHRDSYAYLNASYGTEGLG 387 Query: 109 SFPAVLPIGEQPP 121 S+P P+ PP Sbjct: 388 SYPGYAPLPHLPP 400 >gi|33946274 PR domain containing 1, with ZNF domain isoform 2 [Homo sapiens] Length = 691 Score = 28.1 bits (61), Expect = 4.5 Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 2/73 (2%) Query: 51 PLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYG--NAGYRLPLPA 108 P+ P S D++ ++ SP S + P G + R Y NA Y Sbjct: 194 PIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVGPGSQEHRDSYAYLNASYGTEGLG 253 Query: 109 SFPAVLPIGEQPP 121 S+P P+ PP Sbjct: 254 SYPGYAPLPHLPP 266 >gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] Length = 2063 Score = 28.1 bits (61), Expect = 4.5 Identities = 29/96 (30%), Positives = 35/96 (36%), Gaps = 6/96 (6%) Query: 61 RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQP 120 RP SQ D LS Q P G P + R PA+FP + +Q Sbjct: 209 RPASQSDAMDPLLSGLHIQQQSH-PSGSLAPPHHPMQPVSVNRQMNPANFPQLQQQQQQQ 267 Query: 121 PEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQ 156 + Q Q Q + Q Q Q QQHQQ Q Sbjct: 268 QQQQQQQQQQQQ-----QQQQQQLQARPPQQHQQQQ 298 >gi|153792230 hypothetical protein LOC57670 [Homo sapiens] Length = 1884 Score = 28.1 bits (61), Expect = 4.5 Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 11/81 (13%) Query: 58 PGL----RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYR--LPLPASFP 111 PGL P+ +E +ATQ S SP+Q PC E+ YG LP P P Sbjct: 1666 PGLPANSTPSQEERRATQWGSFYSPAQTANNPCSRYED-----YGMTPPTGPLPRPGFGP 1720 Query: 112 AVLPIGEQPPEGQWQHQAEVQ 132 +L E P Q QA + Sbjct: 1721 GLLQSTELVPPDPQQPQASAE 1741 >gi|51873055 fibulin 2 isoform b precursor [Homo sapiens] Length = 1184 Score = 28.1 bits (61), Expect = 4.5 Identities = 14/38 (36%), Positives = 17/38 (44%) Query: 55 CCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEP 92 CCG GLR ++ + P VML C EEP Sbjct: 521 CCGLGLRVRAEGQSCESNPNLGYPCNHVMLSCCEGEEP 558 >gi|51873053 fibulin 2 isoform a precursor [Homo sapiens] Length = 1231 Score = 28.1 bits (61), Expect = 4.5 Identities = 14/38 (36%), Positives = 17/38 (44%) Query: 55 CCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEP 92 CCG GLR ++ + P VML C EEP Sbjct: 521 CCGLGLRVRAEGQSCESNPNLGYPCNHVMLSCCEGEEP 558 >gi|149192855 HLA-B associated transcript 2-like [Homo sapiens] Length = 2229 Score = 28.1 bits (61), Expect = 4.5 Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 23/124 (18%) Query: 1 MEPSQCVEELEDDVFQPEDG-EPVTQPGSLL-SADLFAQSLLDCPLSRLQLFPLTHCCGP 58 M+P + V+ +QP G + + G L +A L A +LD L +L + PL G Sbjct: 2028 MQPLEMVKPQSGSPYQPMSGNQALVYEGQLSQAAGLGASQMLDSQLPQLTM-PLPRY-GS 2085 Query: 59 GLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGE 118 G +P ++LP + P + A R+P P S P VL Sbjct: 2086 GQQP-------------------LILPQSIQLPPGQSLSVGAPRRIPPPGSQPPVLNTSR 2126 Query: 119 QPPE 122 +P + Sbjct: 2127 EPSQ 2130 >gi|169203191 PREDICTED: hypothetical protein [Homo sapiens] Length = 158 Score = 27.7 bits (60), Expect = 5.8 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 8/51 (15%) Query: 69 ATQTLSPAS-----PSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVL 114 ATQ L S P G+ L G +E PQRLF N LP+P V+ Sbjct: 26 ATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSRNT---LPVPDHMAGVM 73 >gi|169203681 PREDICTED: hypothetical protein [Homo sapiens] Length = 179 Score = 27.7 bits (60), Expect = 5.8 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 8/51 (15%) Query: 69 ATQTLSPAS-----PSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVL 114 ATQ L S P G+ L G +E PQRLF N LP+P V+ Sbjct: 47 ATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSRNT---LPVPDHMAGVM 94 >gi|169202107 PREDICTED: hypothetical protein [Homo sapiens] Length = 179 Score = 27.7 bits (60), Expect = 5.8 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 8/51 (15%) Query: 69 ATQTLSPAS-----PSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVL 114 ATQ L S P G+ L G +E PQRLF N LP+P V+ Sbjct: 47 ATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSRNT---LPVPDHMAGVM 94 >gi|4809279 annexin VII isoform 2 [Homo sapiens] Length = 488 Score = 27.7 bits (60), Expect = 5.8 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 12/82 (14%) Query: 58 PGLRPTSQEDKATQTLSPASPSQGVMLPCGVT-----EEPQRLFYGNAGYRLPLPASFPA 112 PG P + + + P QG +P G +P YG ++PLP FP Sbjct: 69 PGGYPGAPQPGGAPSYPGVPPGQGFGVPPGGAGFSGYPQPPSQSYGGGPAQVPLPGGFPG 128 Query: 113 VLPIGEQP---PEGQWQHQAEV 131 G+ P P GQ + +++ Sbjct: 129 ----GQMPSQYPGGQPTYPSQI 146 >gi|38045915 pregnancy-associated plasma protein A preproprotein [Homo sapiens] Length = 1627 Score = 27.3 bits (59), Expect = 7.6 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 14/66 (21%) Query: 84 LPCGVTEEPQRLFYGNAGYRLPLPASFPAVL-----------PIGEQPPEGQWQHQAEVQ 132 L CG+ E P+R R P PA+ PA P PP G W+ V+ Sbjct: 17 LGCGLAERPRRARRDPRAGRPPRPAAGPATCATRAARGRRASPPPPPPPGGAWE---AVR 73 Query: 133 IARKLQ 138 + R+ Q Sbjct: 74 VPRRRQ 79 >gi|239752280 PREDICTED: similar to family with sequence similarity 48, member B2 [Homo sapiens] Length = 779 Score = 27.3 bits (59), Expect = 7.6 Identities = 15/39 (38%), Positives = 20/39 (51%) Query: 57 GPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRL 95 G GL+P Q + S P QGV LP + ++PQ L Sbjct: 679 GSGLQPQPQAAVLSLLGSAQVPQQGVQLPFVLGQQPQPL 717 >gi|210032463 family with sequence similarity 48, member B2 [Homo sapiens] Length = 817 Score = 27.3 bits (59), Expect = 7.6 Identities = 15/39 (38%), Positives = 20/39 (51%) Query: 57 GPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRL 95 G GL+P Q + S P QGV LP + ++PQ L Sbjct: 717 GSGLQPQPQAAVLSLLGSAQVPQQGVQLPFVLGQQPQPL 755 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.136 0.430 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,117,358 Number of Sequences: 37866 Number of extensions: 466600 Number of successful extensions: 1318 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 23 Number of HSP's that attempted gapping in prelim test: 1300 Number of HSP's gapped (non-prelim): 40 length of query: 184 length of database: 18,247,518 effective HSP length: 96 effective length of query: 88 effective length of database: 14,612,382 effective search space: 1285889616 effective search space used: 1285889616 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.