Guide to the Human Genome
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Search of human proteins with 51558688

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|51558688 Bcl2 modifying factor isoform bmf-1 [Homo sapiens]
         (184 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|15723378 Bcl2 modifying factor isoform bmf-1 [Homo sapiens]        388   e-108
gi|51558688 Bcl2 modifying factor isoform bmf-1 [Homo sapiens]        388   e-108
gi|51558701 Bcl2 modifying factor isoform bmf-2 [Homo sapiens]        334   3e-92
gi|51558704 Bcl2 modifying factor isoform bmf-3 [Homo sapiens]        205   2e-53
gi|55956910 meningioma  1 [Homo sapiens]                               32   0.31 
gi|144226234 metastasis suppressor 1 [Homo sapiens]                    30   0.90 
gi|54607014 TBC1 domain family, member 25 [Homo sapiens]               30   1.2  
gi|4758010 clock [Homo sapiens]                                        30   1.5  
gi|46370073 GRB2-associated binding protein 1 isoform b [Homo sa...    29   2.0  
gi|46370071 GRB2-associated binding protein 1 isoform a [Homo sa...    29   2.0  
gi|239756880 PREDICTED: hypothetical protein [Homo sapiens]            29   2.0  
gi|239751374 PREDICTED: hypothetical protein XP_002347830 [Homo ...    29   2.0  
gi|81295809 pericentrin [Homo sapiens]                                 29   2.0  
gi|57242761 receptor (TNFRSF)-interacting serine-threonine kinas...    28   3.4  
gi|34996489 pleckstrin homology domain interacting protein [Homo...    28   3.4  
gi|116292168 KRAB A domain containing 1 [Homo sapiens]                 28   3.4  
gi|172072684 PR domain containing 1, with ZNF domain isoform 1 [...    28   4.5  
gi|33946274 PR domain containing 1, with ZNF domain isoform 2 [H...    28   4.5  
gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]              28   4.5  
gi|153792230 hypothetical protein LOC57670 [Homo sapiens]              28   4.5  
gi|51873055 fibulin 2 isoform b precursor [Homo sapiens]               28   4.5  
gi|51873053 fibulin 2 isoform a precursor [Homo sapiens]               28   4.5  
gi|149192855 HLA-B associated transcript 2-like [Homo sapiens]         28   4.5  
gi|169203191 PREDICTED: hypothetical protein [Homo sapiens]            28   5.8  
gi|169203681 PREDICTED: hypothetical protein [Homo sapiens]            28   5.8  
gi|169202107 PREDICTED: hypothetical protein [Homo sapiens]            28   5.8  
gi|4809279 annexin VII isoform 2 [Homo sapiens]                        28   5.8  
gi|38045915 pregnancy-associated plasma protein A preproprotein ...    27   7.6  
gi|239752280 PREDICTED: similar to family with sequence similari...    27   7.6  
gi|210032463 family with sequence similarity 48, member B2 [Homo...    27   7.6  

>gi|15723378 Bcl2 modifying factor isoform bmf-1 [Homo sapiens]
          Length = 184

 Score =  388 bits (997), Expect = e-108
 Identities = 184/184 (100%), Positives = 184/184 (100%)

Query: 1   MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL 60
           MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL
Sbjct: 1   MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL 60

Query: 61  RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQP 120
           RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQP
Sbjct: 61  RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQP 120

Query: 121 PEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVWWQILLFLHNLALNGEENRNG 180
           PEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVWWQILLFLHNLALNGEENRNG
Sbjct: 121 PEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVWWQILLFLHNLALNGEENRNG 180

Query: 181 AGPR 184
           AGPR
Sbjct: 181 AGPR 184


>gi|51558688 Bcl2 modifying factor isoform bmf-1 [Homo sapiens]
          Length = 184

 Score =  388 bits (997), Expect = e-108
 Identities = 184/184 (100%), Positives = 184/184 (100%)

Query: 1   MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL 60
           MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL
Sbjct: 1   MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL 60

Query: 61  RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQP 120
           RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQP
Sbjct: 61  RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQP 120

Query: 121 PEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVWWQILLFLHNLALNGEENRNG 180
           PEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVWWQILLFLHNLALNGEENRNG
Sbjct: 121 PEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVWWQILLFLHNLALNGEENRNG 180

Query: 181 AGPR 184
           AGPR
Sbjct: 181 AGPR 184


>gi|51558701 Bcl2 modifying factor isoform bmf-2 [Homo sapiens]
          Length = 163

 Score =  334 bits (856), Expect = 3e-92
 Identities = 163/184 (88%), Positives = 163/184 (88%), Gaps = 21/184 (11%)

Query: 1   MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL 60
           MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL
Sbjct: 1   MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL 60

Query: 61  RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQP 120
           RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQP
Sbjct: 61  RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQP 120

Query: 121 PEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVWWQILLFLHNLALNGEENRNG 180
           PEGQWQHQAE                     HQQNQNRVWWQILLFLHNLALNGEENRNG
Sbjct: 121 PEGQWQHQAE---------------------HQQNQNRVWWQILLFLHNLALNGEENRNG 159

Query: 181 AGPR 184
           AGPR
Sbjct: 160 AGPR 163


>gi|51558704 Bcl2 modifying factor isoform bmf-3 [Homo sapiens]
          Length = 129

 Score =  205 bits (521), Expect = 2e-53
 Identities = 104/130 (80%), Positives = 107/130 (82%), Gaps = 5/130 (3%)

Query: 1   MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL 60
           MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL
Sbjct: 1   MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGL 60

Query: 61  RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQP 120
           RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFY  A      P S     P     
Sbjct: 61  RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYAPAE-----PKSCVVADPPLPAQ 115

Query: 121 PEGQWQHQAE 130
           P  +W+ + E
Sbjct: 116 PCFEWRREQE 125


>gi|55956910 meningioma  1 [Homo sapiens]
          Length = 1320

 Score = 32.0 bits (71), Expect = 0.31
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 5/74 (6%)

Query: 105 PLPASFPAVLPIGEQPPEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVWWQIL 164
           P+P SFP+  P+    P+ Q   Q + Q  ++ Q    Q  +   QQ QQ QN       
Sbjct: 501 PVPDSFPSGPPLQHPAPDHQSLQQQQQQQQQQQQQQQQQQQQQQQQQQQQRQNAA----- 555

Query: 165 LFLHNLALNGEENR 178
           L +  +A   ++ R
Sbjct: 556 LMIKQMASRNQQQR 569


>gi|144226234 metastasis suppressor 1 [Homo sapiens]
          Length = 755

 Score = 30.4 bits (67), Expect = 0.90
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 74  SPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAV 113
           SP SPS G   P GVT  P  ++ G A    PLP   P++
Sbjct: 644 SPESPSVGEG-PQGVTSMPSSMWSGQASVNPPLPGPKPSI 682


>gi|54607014 TBC1 domain family, member 25 [Homo sapiens]
          Length = 688

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 22/119 (18%)

Query: 7   VEELEDDVFQPEDGEPVTQ---PGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGLRPT 63
           +++L D++    D  P+ Q   P +L+S+   ++ LL+ P   L  F           P+
Sbjct: 510 LQQLRDNMGSRRD--PLVQLPHPAALISSKSLSEPLLNSPDPLLSSFSHPDSPSSSSPPS 567

Query: 64  SQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQPPE 122
           +QE   T  ++  SP   +M   G  ++P +              S P V P+G  PP+
Sbjct: 568 TQEASPTGDMAVGSP---LMQEVGSPKDPGK--------------SLPPVPPMGLPPPQ 609


>gi|4758010 clock [Homo sapiens]
          Length = 846

 Score = 29.6 bits (65), Expect = 1.5
 Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 11/77 (14%)

Query: 65  QEDKATQTLSPASPSQGVMLPCGVTEEPQ------RLFYGNAGYRLPLPASFPAVLPIGE 118
           Q  +  Q  S   PSQ  +     T+ PQ      RL +GN   +L L A+FP       
Sbjct: 760 QSSQEQQLTSVQQPSQAQL-----TQPPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFP 814

Query: 119 QPPEGQWQHQAEVQIAR 135
           Q    Q Q Q + Q++R
Sbjct: 815 QSHHQQHQSQQQQQLSR 831


>gi|46370073 GRB2-associated binding protein 1 isoform b [Homo
           sapiens]
          Length = 694

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 24/84 (28%)

Query: 15  FQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGLRPTSQEDKATQTLS 74
           F P + +PV  PGS L      Q+  D PL+ +   P          P++Q D ++ TL 
Sbjct: 117 FNPTEEDPVKPPGSSL------QAPADLPLA-INTAP----------PSTQADSSSATLP 159

Query: 75  PASPSQGVMLP-----CGVTEEPQ 93
           P  P Q + +P      G+ E+PQ
Sbjct: 160 P--PYQLINVPPHLETLGIQEDPQ 181


>gi|46370071 GRB2-associated binding protein 1 isoform a [Homo
           sapiens]
          Length = 724

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 24/84 (28%)

Query: 15  FQPEDGEPVTQPGSLLSADLFAQSLLDCPLSRLQLFPLTHCCGPGLRPTSQEDKATQTLS 74
           F P + +PV  PGS L      Q+  D PL+ +   P          P++Q D ++ TL 
Sbjct: 117 FNPTEEDPVKPPGSSL------QAPADLPLA-INTAP----------PSTQADSSSATLP 159

Query: 75  PASPSQGVMLP-----CGVTEEPQ 93
           P  P Q + +P      G+ E+PQ
Sbjct: 160 P--PYQLINVPPHLETLGIQEDPQ 181


>gi|239756880 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 376

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 14/31 (45%), Positives = 18/31 (58%)

Query: 102 YRLPLPASFPAVLPIGEQPPEGQWQHQAEVQ 132
           Y L LP S PAVLP    PP+ + +  A V+
Sbjct: 94  YSLELPLSHPAVLPTTYSPPKAERKRLAGVE 124


>gi|239751374 PREDICTED: hypothetical protein XP_002347830 [Homo
           sapiens]
          Length = 376

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 14/31 (45%), Positives = 18/31 (58%)

Query: 102 YRLPLPASFPAVLPIGEQPPEGQWQHQAEVQ 132
           Y L LP S PAVLP    PP+ + +  A V+
Sbjct: 94  YSLELPLSHPAVLPTTYSPPKAERKRLAGVE 124


>gi|81295809 pericentrin [Homo sapiens]
          Length = 3336

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 14/45 (31%), Positives = 23/45 (51%)

Query: 114  LPIGEQPPEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNR 158
            L  G  PPE QW      +++R+LQ +  +F R  V+  ++   R
Sbjct: 1910 LAAGAAPPELQWLRAQCARLSRQLQVLHQRFLRCQVELDRRQARR 1954


>gi|57242761 receptor (TNFRSF)-interacting serine-threonine kinase 1
           [Homo sapiens]
          Length = 671

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 15/37 (40%), Positives = 18/37 (48%)

Query: 66  EDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGY 102
           E K T   S AS    V  P G+T +PQ L+  N  Y
Sbjct: 433 EGKGTAYSSAASHGNAVHQPSGLTSQPQVLYQNNGLY 469


>gi|34996489 pleckstrin homology domain interacting protein [Homo
            sapiens]
          Length = 1821

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)

Query: 5    QCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLLDCPL 44
            QC EEL + +FQ ED EP  QP  LL    + + ++D P+
Sbjct: 1324 QC-EELLNLIFQCEDSEPFRQPVDLLEYPDY-RDIIDTPM 1361


>gi|116292168 KRAB A domain containing 1 [Homo sapiens]
          Length = 1030

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 7/65 (10%)

Query: 58  PGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPI- 116
           P   P      ++Q L  ++PS      C        L     G++ PLP   PA LP+ 
Sbjct: 919 PPAEPPGLHCSSSQQLLSSTPS------CHAAPPAHPLLAHTGGHQSPLPPLVPAALPLQ 972

Query: 117 GEQPP 121
           G  PP
Sbjct: 973 GASPP 977


>gi|172072684 PR domain containing 1, with ZNF domain isoform 1
           [Homo sapiens]
          Length = 825

 Score = 28.1 bits (61), Expect = 4.5
 Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 51  PLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYG--NAGYRLPLPA 108
           P+     P     S  D++ ++ SP S     + P G   +  R  Y   NA Y      
Sbjct: 328 PIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVGPGSQEHRDSYAYLNASYGTEGLG 387

Query: 109 SFPAVLPIGEQPP 121
           S+P   P+   PP
Sbjct: 388 SYPGYAPLPHLPP 400


>gi|33946274 PR domain containing 1, with ZNF domain isoform 2 [Homo
           sapiens]
          Length = 691

 Score = 28.1 bits (61), Expect = 4.5
 Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 51  PLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYG--NAGYRLPLPA 108
           P+     P     S  D++ ++ SP S     + P G   +  R  Y   NA Y      
Sbjct: 194 PIPSSTTPSPSARSSPDQSLKSSSPHSSPGNTVSPVGPGSQEHRDSYAYLNASYGTEGLG 253

Query: 109 SFPAVLPIGEQPP 121
           S+P   P+   PP
Sbjct: 254 SYPGYAPLPHLPP 266


>gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]
          Length = 2063

 Score = 28.1 bits (61), Expect = 4.5
 Identities = 29/96 (30%), Positives = 35/96 (36%), Gaps = 6/96 (6%)

Query: 61  RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGEQP 120
           RP SQ D     LS     Q    P G    P       +  R   PA+FP +    +Q 
Sbjct: 209 RPASQSDAMDPLLSGLHIQQQSH-PSGSLAPPHHPMQPVSVNRQMNPANFPQLQQQQQQQ 267

Query: 121 PEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQ 156
            + Q Q Q + Q     Q    Q      QQHQQ Q
Sbjct: 268 QQQQQQQQQQQQ-----QQQQQQLQARPPQQHQQQQ 298


>gi|153792230 hypothetical protein LOC57670 [Homo sapiens]
          Length = 1884

 Score = 28.1 bits (61), Expect = 4.5
 Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 11/81 (13%)

Query: 58   PGL----RPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYR--LPLPASFP 111
            PGL     P+ +E +ATQ  S  SP+Q    PC   E+     YG       LP P   P
Sbjct: 1666 PGLPANSTPSQEERRATQWGSFYSPAQTANNPCSRYED-----YGMTPPTGPLPRPGFGP 1720

Query: 112  AVLPIGEQPPEGQWQHQAEVQ 132
             +L   E  P    Q QA  +
Sbjct: 1721 GLLQSTELVPPDPQQPQASAE 1741


>gi|51873055 fibulin 2 isoform b precursor [Homo sapiens]
          Length = 1184

 Score = 28.1 bits (61), Expect = 4.5
 Identities = 14/38 (36%), Positives = 17/38 (44%)

Query: 55  CCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEP 92
           CCG GLR  ++        +   P   VML C   EEP
Sbjct: 521 CCGLGLRVRAEGQSCESNPNLGYPCNHVMLSCCEGEEP 558


>gi|51873053 fibulin 2 isoform a precursor [Homo sapiens]
          Length = 1231

 Score = 28.1 bits (61), Expect = 4.5
 Identities = 14/38 (36%), Positives = 17/38 (44%)

Query: 55  CCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEP 92
           CCG GLR  ++        +   P   VML C   EEP
Sbjct: 521 CCGLGLRVRAEGQSCESNPNLGYPCNHVMLSCCEGEEP 558


>gi|149192855 HLA-B associated transcript 2-like [Homo sapiens]
          Length = 2229

 Score = 28.1 bits (61), Expect = 4.5
 Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 23/124 (18%)

Query: 1    MEPSQCVEELEDDVFQPEDG-EPVTQPGSLL-SADLFAQSLLDCPLSRLQLFPLTHCCGP 58
            M+P + V+      +QP  G + +   G L  +A L A  +LD  L +L + PL    G 
Sbjct: 2028 MQPLEMVKPQSGSPYQPMSGNQALVYEGQLSQAAGLGASQMLDSQLPQLTM-PLPRY-GS 2085

Query: 59   GLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVLPIGE 118
            G +P                   ++LP  +   P +     A  R+P P S P VL    
Sbjct: 2086 GQQP-------------------LILPQSIQLPPGQSLSVGAPRRIPPPGSQPPVLNTSR 2126

Query: 119  QPPE 122
            +P +
Sbjct: 2127 EPSQ 2130


>gi|169203191 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 158

 Score = 27.7 bits (60), Expect = 5.8
 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 8/51 (15%)

Query: 69  ATQTLSPAS-----PSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVL 114
           ATQ L   S     P  G+ L  G +E PQRLF  N    LP+P     V+
Sbjct: 26  ATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSRNT---LPVPDHMAGVM 73


>gi|169203681 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 179

 Score = 27.7 bits (60), Expect = 5.8
 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 8/51 (15%)

Query: 69  ATQTLSPAS-----PSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVL 114
           ATQ L   S     P  G+ L  G +E PQRLF  N    LP+P     V+
Sbjct: 47  ATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSRNT---LPVPDHMAGVM 94


>gi|169202107 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 179

 Score = 27.7 bits (60), Expect = 5.8
 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 8/51 (15%)

Query: 69  ATQTLSPAS-----PSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVL 114
           ATQ L   S     P  G+ L  G +E PQRLF  N    LP+P     V+
Sbjct: 47  ATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSRNT---LPVPDHMAGVM 94


>gi|4809279 annexin VII isoform 2 [Homo sapiens]
          Length = 488

 Score = 27.7 bits (60), Expect = 5.8
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 12/82 (14%)

Query: 58  PGLRPTSQEDKATQTLSPASPSQGVMLPCGVT-----EEPQRLFYGNAGYRLPLPASFPA 112
           PG  P + +     +     P QG  +P G        +P    YG    ++PLP  FP 
Sbjct: 69  PGGYPGAPQPGGAPSYPGVPPGQGFGVPPGGAGFSGYPQPPSQSYGGGPAQVPLPGGFPG 128

Query: 113 VLPIGEQP---PEGQWQHQAEV 131
               G+ P   P GQ  + +++
Sbjct: 129 ----GQMPSQYPGGQPTYPSQI 146


>gi|38045915 pregnancy-associated plasma protein A preproprotein
           [Homo sapiens]
          Length = 1627

 Score = 27.3 bits (59), Expect = 7.6
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 14/66 (21%)

Query: 84  LPCGVTEEPQRLFYGNAGYRLPLPASFPAVL-----------PIGEQPPEGQWQHQAEVQ 132
           L CG+ E P+R        R P PA+ PA             P    PP G W+    V+
Sbjct: 17  LGCGLAERPRRARRDPRAGRPPRPAAGPATCATRAARGRRASPPPPPPPGGAWE---AVR 73

Query: 133 IARKLQ 138
           + R+ Q
Sbjct: 74  VPRRRQ 79


>gi|239752280 PREDICTED: similar to family with sequence similarity
           48, member B2 [Homo sapiens]
          Length = 779

 Score = 27.3 bits (59), Expect = 7.6
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 57  GPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRL 95
           G GL+P  Q    +   S   P QGV LP  + ++PQ L
Sbjct: 679 GSGLQPQPQAAVLSLLGSAQVPQQGVQLPFVLGQQPQPL 717


>gi|210032463 family with sequence similarity 48, member B2 [Homo
           sapiens]
          Length = 817

 Score = 27.3 bits (59), Expect = 7.6
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 57  GPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRL 95
           G GL+P  Q    +   S   P QGV LP  + ++PQ L
Sbjct: 717 GSGLQPQPQAAVLSLLGSAQVPQQGVQLPFVLGQQPQPL 755


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.136    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,117,358
Number of Sequences: 37866
Number of extensions: 466600
Number of successful extensions: 1318
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1300
Number of HSP's gapped (non-prelim): 40
length of query: 184
length of database: 18,247,518
effective HSP length: 96
effective length of query: 88
effective length of database: 14,612,382
effective search space: 1285889616
effective search space used: 1285889616
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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