Guide to the Human Genome
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Name: BMF Sequence: fasta or formatted (184aa) NCBI GI: 51558688
Description:

Bcl2 modifying factor isoform bmf-1

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Other entries for this name:
alt mRNA [184aa] Bcl2 modifying factor isoform bmf-1
alt prot [163aa] Bcl2 modifying factor isoform bmf-2
alt prot [129aa] Bcl2 modifying factor isoform bmf-3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         12           1
 C cysteine            3.3          6           2
 D aspartate           3.8          7           2
 E glutamate           7.6         14           2
 F phenylalanine       3.8          7           1
 G glycine             7.1         13           1
 H histidine           3.3          6           1
 I isoleucine          2.2          4           1
 K lysine              1.1          2           1
 L leucine            13.0         24           2
 M methionine          1.1          2           1
 N asparagine          3.8          7           1
 P proline            10.3         19           2
 Q glutamine          12.0         22           2
 R arginine            4.9          9           1
 S serine              5.4         10           1
 T threonine           3.3          6           1
 V valine              4.9          9           1
 W tryptophan          1.6          3           2
 Y tyrosine            1.1          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Bcl2 modifying factor isoform bmf-1 
BMF                   1.000   Bcl2 modifying factor isoform bmf-1 
BMF                   0.851   Bcl2 modifying factor isoform bmf-2 
BMF                   0.496   Bcl2 modifying factor isoform bmf-3 
MN1                   0.019   meningioma  1 
MTSS1                 0.014   metastasis suppressor 1 
TBC1D25               0.014   TBC1 domain family, member 25 
CLOCK                 0.014   clock 
GAB1                  0.011   GRB2-associated binding protein 1 isoform b 
GAB1                  0.011   GRB2-associated binding protein 1 isoform a 
LOC100292979          0.011   PREDICTED: hypothetical protein 
LOC100290530          0.011   PREDICTED: hypothetical protein XP_002347830 
PCNT                  0.011   pericentrin 
RIPK1                 0.008   receptor (TNFRSF)-interacting serine-threonine kinas...
PHIP                  0.008   pleckstrin homology domain interacting protein [Homo...
KRBA1                 0.008   KRAB A domain containing 1 
PRDM1                 0.008   PR domain containing 1, with ZNF domain isoform 1 [...
PRDM1                 0.008   PR domain containing 1, with ZNF domain isoform 2 [H...
NCOA6                 0.008   nuclear receptor coactivator 6 
KIAA1549              0.008   hypothetical protein LOC57670 
FBLN2                 0.008   fibulin 2 isoform b precursor 
FBLN2                 0.008   fibulin 2 isoform a precursor 
BAT2L                 0.008   HLA-B associated transcript 2-like 
LOC729492             0.008   PREDICTED: hypothetical protein 
LOC729492             0.008   PREDICTED: hypothetical protein 
LOC729492             0.008   PREDICTED: hypothetical protein 
ANXA7                 0.008   annexin VII isoform 2 
PAPPA                 0.006   pregnancy-associated plasma protein A preproprotein ...
LOC100294444          0.006   PREDICTED: similar to family with sequence similari...
FAM48B2               0.006   family with sequence similarity 48, member B2 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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