Guide to the Human Genome
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Name: FAM90A18 Sequence: fasta or formatted (464aa) NCBI GI: 51466911
Description:

PREDICTED: hypothetical protein LOC441326

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.6         49           3
 C cysteine            2.2         10           1
 D aspartate           3.4         16           1
 E glutamate           5.4         25           2
 F phenylalanine       1.7          8           1
 G glycine             7.1         33           2
 H histidine           3.0         14           2
 I isoleucine          0.6          3           1
 K lysine              6.7         31           2
 L leucine             8.4         39           2
 M methionine          1.9          9           2
 N asparagine          1.7          8           1
 P proline            13.6         63           3
 Q glutamine           5.6         26           2
 R arginine            7.5         35           2
 S serine             10.6         49           5
 T threonine           3.9         18           2
 V valine              4.7         22           2
 W tryptophan          1.1          5           1
 Y tyrosine            0.2          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein LOC441326 
FAM90A19              1.000   PREDICTED: hypothetical protein 
FAM90A9               0.987   PREDICTED: hypothetical protein 
FAM90A8               0.980   PREDICTED: hypothetical protein 
FAM90A10              0.975   PREDICTED: hypothetical protein LOC441328 
FAM90A15              0.972   PREDICTED: hypothetical protein LOC389630 
FAM90A14              0.969   PREDICTED: hypothetical protein 
FAM90A13              0.969   PREDICTED: hypothetical protein 
FAM90A3               0.969   PREDICTED: hypothetical protein 
FAM90A5               0.968   PREDICTED: hypothetical protein 
FAM90A12              0.966   PREDICTED: hypothetical protein 
FAM90A7               0.964   hypothetical protein LOC441317 
FAM90A20              0.933   PREDICTED: hypothetical protein 
FAM90A20              0.929   PREDICTED: hypothetical protein 
LOC100287045          0.922   PREDICTED: hypothetical protein XP_002342469 isofor...
LOC100287045          0.922   PREDICTED: hypothetical protein XP_002342468 isofor...
FAM90A1               0.905   hypothetical protein LOC55138 
LOC646508             0.213   PREDICTED: hypothetical LOC646508 
LOC646508             0.213   PREDICTED: hypothetical LOC646508 
LOC646508             0.158   PREDICTED: hypothetical LOC646508 
FLJ22184              0.028   PREDICTED: hypothetical protein LOC80164 
FLJ22184              0.027   PREDICTED: hypothetical protein FLJ22184 
MLL2                  0.026   myeloid/lymphoid or mixed-lineage leukemia 2 
FLJ22184              0.025   PREDICTED: hypothetical protein FLJ22184 
PCLO                  0.025   piccolo isoform 2 
PCLO                  0.025   piccolo isoform 1 
ATN1                  0.024   atrophin-1 
ATN1                  0.024   atrophin-1 
FSCB                  0.024   fibrous sheath CABYR binding protein 
ZNF469                0.024   zinc finger protein 469 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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