Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 51241788
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|51241788 GTF2I repeat domain containing 2B [Homo sapiens]
(949 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|51241788 GTF2I repeat domain containing 2B [Homo sapiens] 1903 0.0
gi|48762700 GTF2I repeat domain containing 2 [Homo sapiens] 1890 0.0
gi|14670352 general transcription factor II, i isoform 2 [Homo s... 472 e-133
gi|14670350 general transcription factor II, i isoform 1 [Homo s... 461 e-129
gi|169881252 general transcription factor II, i isoform 4 [Homo ... 453 e-127
gi|14670354 general transcription factor II, i isoform 3 [Homo s... 442 e-124
gi|7662294 EPM2A interacting protein 1 [Homo sapiens] 205 1e-52
gi|7705387 GTF2I repeat domain containing 1 isoform 1 [Homo sapi... 181 3e-45
gi|15011924 GTF2I repeat domain containing 1 isoform 2 [Homo sap... 181 3e-45
gi|115511046 zinc finger protein 258 [Homo sapiens] 157 3e-38
gi|46195755 SCAN domain containing 3 [Homo sapiens] 155 1e-37
gi|219521826 zinc finger, BED-type containing 5 [Homo sapiens] 152 1e-36
gi|49574210 zinc finger, BED-type containing 5 [Homo sapiens] 152 1e-36
gi|239746033 PREDICTED: hypothetical protein XP_002344174 [Homo ... 149 2e-35
gi|223633919 hypothetical protein LOC285550 [Homo sapiens] 148 3e-35
gi|28916698 transposon-derived Buster3 transposase-like [Homo sa... 145 2e-34
gi|21495178 hypothetical protein LOC221786 [Homo sapiens] 137 5e-32
gi|239757552 PREDICTED: similar to hCG2006635, partial [Homo sap... 118 2e-26
gi|239752592 PREDICTED: hypothetical protein XP_002348308, parti... 118 3e-26
gi|239754606 PREDICTED: similar to hCG1983816 [Homo sapiens] 88 4e-17
gi|239749152 PREDICTED: similar to hCG1983816 [Homo sapiens] 88 4e-17
gi|239508897 PREDICTED: similar to hCG1983816 [Homo sapiens] 88 4e-17
gi|239741279 PREDICTED: similar to FLJ00310 protein [Homo sapiens] 42 0.002
gi|116174778 centrosome spindle pole associated protein 1 isofor... 35 0.43
gi|116174789 centrosome spindle pole associated protein 1 isofor... 35 0.43
gi|19923268 protein-kinase, interferon-inducible double stranded... 34 0.57
gi|31982906 cingulin-like 1 [Homo sapiens] 34 0.74
gi|171543895 ataxin 2 [Homo sapiens] 33 0.97
gi|155969693 myomesin family, member 3 [Homo sapiens] 33 1.3
gi|47132519 Ras association and pleckstrin homology domains 1 is... 33 1.3
>gi|51241788 GTF2I repeat domain containing 2B [Homo sapiens]
Length = 949
Score = 1903 bits (4930), Expect = 0.0
Identities = 949/949 (100%), Positives = 949/949 (100%)
Query: 1 MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTE 60
MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTE
Sbjct: 1 MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTE 60
Query: 61 RGCAFVNARTDFQKDFAKYCVAEGLCEVKPPCPVNGMQVHSGETEILRKAVEDYFCFCYG 120
RGCAFVNARTDFQKDFAKYCVAEGLCEVKPPCPVNGMQVHSGETEILRKAVEDYFCFCYG
Sbjct: 61 RGCAFVNARTDFQKDFAKYCVAEGLCEVKPPCPVNGMQVHSGETEILRKAVEDYFCFCYG 120
Query: 121 KALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFIIN 180
KALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFIIN
Sbjct: 121 KALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFIIN 180
Query: 181 RPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVKKESED 240
RPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVKKESED
Sbjct: 181 RPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVKKESED 240
Query: 241 PNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTN 300
PNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTN
Sbjct: 241 PNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTN 300
Query: 301 SAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRK 360
SAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRK
Sbjct: 301 SAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRK 360
Query: 361 ITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLELSNVGKRK 420
ITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLELSNVGKRK
Sbjct: 361 ITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLELSNVGKRK 420
Query: 421 IDQEGRVFQEKWERAYFFVEVQNIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYDQYTER 480
IDQEGRVFQEKWERAYFFVEVQNIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYDQYTER
Sbjct: 421 IDQEGRVFQEKWERAYFFVEVQNIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYDQYTER 480
Query: 481 MRDEKLHELKKGLRKYLLGSSDTECPEQKQVFANPSPTQKSPVQPVEDLAGNLWEKLREK 540
MRDEKLHELKKGLRKYLLGSSDTECPEQKQVFANPSPTQKSPVQPVEDLAGNLWEKLREK
Sbjct: 481 MRDEKLHELKKGLRKYLLGSSDTECPEQKQVFANPSPTQKSPVQPVEDLAGNLWEKLREK 540
Query: 541 IRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFLRVE 600
IRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFLRVE
Sbjct: 541 IRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFLRVE 600
Query: 601 KSLKKFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAELKSICCIIHPESL 660
KSLKKFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAELKSICCIIHPESL
Sbjct: 601 KSLKKFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAELKSICCIIHPESL 660
Query: 661 CAQKLKMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIKWLSRGLVL 720
CAQKLKMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIKWLSRGLVL
Sbjct: 661 CAQKLKMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIKWLSRGLVL 720
Query: 721 KRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQM 780
KRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQM
Sbjct: 721 KRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQM 780
Query: 781 YDLIRAFLAKLCLWETHLTRNNLAHFPTLKLVSRNESDGLNYIPKIAELKTEFQKRLSDF 840
YDLIRAFLAKLCLWETHLTRNNLAHFPTLKLVSRNESDGLNYIPKIAELKTEFQKRLSDF
Sbjct: 781 YDLIRAFLAKLCLWETHLTRNNLAHFPTLKLVSRNESDGLNYIPKIAELKTEFQKRLSDF 840
Query: 841 KLYESELTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPK 900
KLYESELTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPK
Sbjct: 841 KLYESELTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPK 900
Query: 901 YKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQLKDSQWDSVLHIAT 949
YKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQLKDSQWDSVLHIAT
Sbjct: 901 YKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQLKDSQWDSVLHIAT 949
>gi|48762700 GTF2I repeat domain containing 2 [Homo sapiens]
Length = 949
Score = 1890 bits (4895), Expect = 0.0
Identities = 942/949 (99%), Positives = 945/949 (99%)
Query: 1 MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTE 60
MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTE
Sbjct: 1 MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTE 60
Query: 61 RGCAFVNARTDFQKDFAKYCVAEGLCEVKPPCPVNGMQVHSGETEILRKAVEDYFCFCYG 120
RGCAFVNARTDFQKDFAKYCVAEGLCEVKPPCPVNGMQVHSGETEILRKAVEDYFCFCYG
Sbjct: 61 RGCAFVNARTDFQKDFAKYCVAEGLCEVKPPCPVNGMQVHSGETEILRKAVEDYFCFCYG 120
Query: 121 KALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFIIN 180
KALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFIIN
Sbjct: 121 KALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFIIN 180
Query: 181 RPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVKKESED 240
RPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVKKESED
Sbjct: 181 RPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVKKESED 240
Query: 241 PNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTN 300
PNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTN
Sbjct: 241 PNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTN 300
Query: 301 SAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRK 360
SAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRK
Sbjct: 301 SAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRK 360
Query: 361 ITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLELSNVGKRK 420
ITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLELSNVGKRK
Sbjct: 361 ITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLELSNVGKRK 420
Query: 421 IDQEGRVFQEKWERAYFFVEVQNIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYDQYTER 480
IDQEGRVFQEKWERAYFFVEVQNIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYDQY ER
Sbjct: 421 IDQEGRVFQEKWERAYFFVEVQNIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYDQYMER 480
Query: 481 MRDEKLHELKKGLRKYLLGSSDTECPEQKQVFANPSPTQKSPVQPVEDLAGNLWEKLREK 540
MRDEKLHELKKGLRKYLLG SDTECPEQKQVFA+PSPTQKSPVQPVEDLAGNLWEKLREK
Sbjct: 481 MRDEKLHELKKGLRKYLLGLSDTECPEQKQVFAHPSPTQKSPVQPVEDLAGNLWEKLREK 540
Query: 541 IRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFLRVE 600
IRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIF RVE
Sbjct: 541 IRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFSRVE 600
Query: 601 KSLKKFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAELKSICCIIHPESL 660
KSLKKFCI+WS+LVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAELKSICCIIHPESL
Sbjct: 601 KSLKKFCIDWSKLVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAELKSICCIIHPESL 660
Query: 661 CAQKLKMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIKWLSRGLVL 720
CAQKLKMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIKWLSRGLVL
Sbjct: 661 CAQKLKMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIKWLSRGLVL 720
Query: 721 KRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQM 780
KRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQM
Sbjct: 721 KRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQM 780
Query: 781 YDLIRAFLAKLCLWETHLTRNNLAHFPTLKLVSRNESDGLNYIPKIAELKTEFQKRLSDF 840
YDLIRAFLAKLCLWETHLTRNNLAHFPTLKL SRNESDGLNYIPKIAELKTEFQKRLSDF
Sbjct: 781 YDLIRAFLAKLCLWETHLTRNNLAHFPTLKLASRNESDGLNYIPKIAELKTEFQKRLSDF 840
Query: 841 KLYESELTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPK 900
KLYESELTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPK
Sbjct: 841 KLYESELTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPK 900
Query: 901 YKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQLKDSQWDSVLHIAT 949
YKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQLKDSQWDSVLHIAT
Sbjct: 901 YKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQLKDSQWDSVLHIAT 949
>gi|14670352 general transcription factor II, i isoform 2 [Homo
sapiens]
Length = 978
Score = 472 bits (1215), Expect = e-133
Identities = 265/448 (59%), Positives = 313/448 (69%), Gaps = 25/448 (5%)
Query: 1 MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTE 60
MAQVA+STLPVE+E SSE+RMVVTFL+SALESMCKELAKSKAEVACIAVYETDVFVVGTE
Sbjct: 1 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE 60
Query: 61 RGCAFVNARTDFQKDFAKYCVAEG-----LCEVKPPCPVNGMQVHSGETEILRKAVEDYF 115
RG AFVN R DFQKDF KYCV E + ++K N M V + E E LRK VEDYF
Sbjct: 61 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF 120
Query: 116 CFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGI 175
CFCYGKALG + +VPVPYEKMLRDQSAVVVQGLPEGVAF+HPENYDLATLKWILENKAGI
Sbjct: 121 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI 180
Query: 176 SFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVK 235
SFII RPFL P+ +GG MVTDA+RSI+SP SCGPI VKTEP EDSGISL+ AV+VK
Sbjct: 181 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK 240
Query: 236 KESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNS 295
+ESEDP+YYQYN+QGSH SS NE EME+P EDST VPS E +EDPE EV IE + S
Sbjct: 241 EESEDPDYYQYNIQGSHHSSEGNEGTEMEVPAEDSTQHVPS-ETSEDPEVEVTIEDDDYS 299
Query: 296 SSVTNSAAGVEDLNIVQVTVPD-----NEKERLSSIEK----IKQLREQVNDLFSRKFGE 346
A + Q VP+ K R + EK I LR+QV +LF RK+ +
Sbjct: 300 PPSKRPKAN----ELPQPPVPEPANAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQ 355
Query: 347 AIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIR 406
AI PV +PY + + ++G+P G+ F+ P I + RIL A E I+F + +
Sbjct: 356 AIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKK 415
Query: 407 PLPGLELSNVGKR--KIDQEGRVFQEKW 432
EL N + ++D+ +E+W
Sbjct: 416 H----ELLNSTREDLQLDKPASGVKEEW 439
Score = 205 bits (521), Expect = 2e-52
Identities = 100/140 (71%), Positives = 118/140 (84%)
Query: 294 NSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFP 353
+S +V +A+GVEDLNI+QVT+PD++ ERLS +EK +QLREQVNDLFSRKFGEAIG+ FP
Sbjct: 810 SSPNVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFP 869
Query: 354 VKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLEL 413
VKVPYRKIT NPGCVV+DGMPPGV FKAP YLEISSMRRIL++AEFIKFTVIRP PGL +
Sbjct: 870 VKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRPFPGLVI 929
Query: 414 SNVGKRKIDQEGRVFQEKWE 433
+N + + EG V QE E
Sbjct: 930 NNQLVDQSESEGPVIQESAE 949
Score = 90.1 bits (222), Expect = 9e-18
Identities = 83/305 (27%), Positives = 131/305 (42%), Gaps = 23/305 (7%)
Query: 107 LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLK 166
LRK VE+ F Y +A+ V +PY + V+GLPEG+ F+ P Y + L+
Sbjct: 341 LRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLE 400
Query: 167 WILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGIS 226
IL K I F+I + L L ++ E K M D
Sbjct: 401 RILLAKERIRFVIKKHEL-----LNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFC 455
Query: 227 LK-AEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPN--EDP 283
K AEA+ + P Y +HP+ +L +E +P P+ P
Sbjct: 456 KKFAEALGSTEAKAVP----YQKFEAHPN---------DLYVEGLPENIPFRSPSWYGIP 502
Query: 284 EAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVP-DNEKERLSSIEKIKQLREQVNDLFSR 342
E I+ V + + +VT P N + +I +LR+QV ++F+
Sbjct: 503 RLEKIIQVGNRIKFVIKRPELLTH-STTEVTQPRTNTPVKEDWNVRITKLRKQVEEIFNL 561
Query: 343 KFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKF 402
KF +A+G+ VKVPY NP + ++G+P G+ F++P + I + RI+ + IKF
Sbjct: 562 KFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKF 621
Query: 403 TVIRP 407
V +P
Sbjct: 622 VVKKP 626
Score = 67.0 bits (162), Expect = 8e-11
Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
Query: 283 PEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIE----KIKQLREQVND 338
PE EV +EG N++ T++ N VP + R S E KI L+++V +
Sbjct: 662 PEIEVTVEGPNNNNPQTSAVRTPTQTN--GSNVPFKPRGREFSFEAWNAKITDLKQKVEN 719
Query: 339 LFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAE 398
LF+ K GEA+G+ VKVP+ P ++G+P GV F+ P I + +IL
Sbjct: 720 LFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKA 779
Query: 399 FIKFTVIRP 407
IKF + +P
Sbjct: 780 KIKFIIKKP 788
Score = 65.9 bits (159), Expect = 2e-10
Identities = 47/144 (32%), Positives = 73/144 (50%), Gaps = 20/144 (13%)
Query: 107 LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLK 166
LR+ V D F +G+A+G V VPY K+ + VVV G+P GV+F+ P ++++++
Sbjct: 848 LREQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMR 907
Query: 167 WILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGIS 226
IL++ I F + RPF PG+V + +V SES GP V E E S +
Sbjct: 908 RILDSAEFIKFTVIRPF---------PGLVIN--NQLVDQSESEGP--VIQESAEPSQLE 954
Query: 227 LKA-------EAVSVKKESEDPNY 243
+ A + S K+ DP +
Sbjct: 955 VPATEEIKETDGSSQIKQEPDPTW 978
Score = 55.1 bits (131), Expect = 3e-07
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 107 LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLK 166
L++ VE+ F G+ALG V VP+ V+GLPEGV F+ P + + L+
Sbjct: 713 LKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLE 772
Query: 167 WILENKAGISFIINRP 182
IL NKA I FII +P
Sbjct: 773 KILRNKAKIKFIIKKP 788
>gi|14670350 general transcription factor II, i isoform 1 [Homo
sapiens]
Length = 998
Score = 461 bits (1185), Expect = e-129
Identities = 265/468 (56%), Positives = 313/468 (66%), Gaps = 45/468 (9%)
Query: 1 MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTE 60
MAQVA+STLPVE+E SSE+RMVVTFL+SALESMCKELAKSKAEVACIAVYETDVFVVGTE
Sbjct: 1 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE 60
Query: 61 RGCAFVNARTDFQKDFAKYCVAEG-----LCEVKPPCPVNGMQVHSGETEILRKAVEDYF 115
RG AFVN R DFQKDF KYCV E + ++K N M V + E E LRK VEDYF
Sbjct: 61 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF 120
Query: 116 CFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGI 175
CFCYGKALG + +VPVPYEKMLRDQSAVVVQGLPEGVAF+HPENYDLATLKWILENKAGI
Sbjct: 121 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI 180
Query: 176 SFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVK 235
SFII RPFL P+ +GG MVTDA+RSI+SP SCGPI VKTEP EDSGISL+ AV+VK
Sbjct: 181 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK 240
Query: 236 KESEDPNYYQYN--------------------MQGSHPSSTSNEVIEMELPMEDSTPLVP 275
+ESEDP+YYQYN +QGSH SS NE EME+P EDST VP
Sbjct: 241 EESEDPDYYQYNIQAGPSETDDVDEKQPLSKPLQGSHHSSEGNEGTEMEVPAEDSTQHVP 300
Query: 276 SEEPNEDPEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPD-----NEKERLSSIEK-- 328
S E +EDPE EV IE + S A + Q VP+ K R + EK
Sbjct: 301 S-ETSEDPEVEVTIEDDDYSPPSKRPKAN----ELPQPPVPEPANAGKRKVREFNFEKWN 355
Query: 329 --IKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLE 386
I LR+QV +LF RK+ +AI PV +PY + + ++G+P G+ F+ P
Sbjct: 356 ARITDLRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYG 415
Query: 387 ISSMRRILEAAEFIKFTVIRPLPGLELSNVGKR--KIDQEGRVFQEKW 432
I + RIL A E I+F + + EL N + ++D+ +E+W
Sbjct: 416 IPRLERILLAKERIRFVIKKH----ELLNSTREDLQLDKPASGVKEEW 459
Score = 205 bits (521), Expect = 2e-52
Identities = 100/140 (71%), Positives = 118/140 (84%)
Query: 294 NSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFP 353
+S +V +A+GVEDLNI+QVT+PD++ ERLS +EK +QLREQVNDLFSRKFGEAIG+ FP
Sbjct: 830 SSPNVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFP 889
Query: 354 VKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLEL 413
VKVPYRKIT NPGCVV+DGMPPGV FKAP YLEISSMRRIL++AEFIKFTVIRP PGL +
Sbjct: 890 VKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRPFPGLVI 949
Query: 414 SNVGKRKIDQEGRVFQEKWE 433
+N + + EG V QE E
Sbjct: 950 NNQLVDQSESEGPVIQESAE 969
Score = 90.1 bits (222), Expect = 9e-18
Identities = 83/305 (27%), Positives = 131/305 (42%), Gaps = 23/305 (7%)
Query: 107 LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLK 166
LRK VE+ F Y +A+ V +PY + V+GLPEG+ F+ P Y + L+
Sbjct: 361 LRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLE 420
Query: 167 WILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGIS 226
IL K I F+I + L L ++ E K M D
Sbjct: 421 RILLAKERIRFVIKKHEL-----LNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFC 475
Query: 227 LK-AEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPN--EDP 283
K AEA+ + P Y +HP+ +L +E +P P+ P
Sbjct: 476 KKFAEALGSTEAKAVP----YQKFEAHPN---------DLYVEGLPENIPFRSPSWYGIP 522
Query: 284 EAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVP-DNEKERLSSIEKIKQLREQVNDLFSR 342
E I+ V + + +VT P N + +I +LR+QV ++F+
Sbjct: 523 RLEKIIQVGNRIKFVIKRPELLTH-STTEVTQPRTNTPVKEDWNVRITKLRKQVEEIFNL 581
Query: 343 KFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKF 402
KF +A+G+ VKVPY NP + ++G+P G+ F++P + I + RI+ + IKF
Sbjct: 582 KFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKF 641
Query: 403 TVIRP 407
V +P
Sbjct: 642 VVKKP 646
Score = 67.0 bits (162), Expect = 8e-11
Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
Query: 283 PEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIE----KIKQLREQVND 338
PE EV +EG N++ T++ N VP + R S E KI L+++V +
Sbjct: 682 PEIEVTVEGPNNNNPQTSAVRTPTQTN--GSNVPFKPRGREFSFEAWNAKITDLKQKVEN 739
Query: 339 LFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAE 398
LF+ K GEA+G+ VKVP+ P ++G+P GV F+ P I + +IL
Sbjct: 740 LFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKA 799
Query: 399 FIKFTVIRP 407
IKF + +P
Sbjct: 800 KIKFIIKKP 808
Score = 65.9 bits (159), Expect = 2e-10
Identities = 47/144 (32%), Positives = 73/144 (50%), Gaps = 20/144 (13%)
Query: 107 LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLK 166
LR+ V D F +G+A+G V VPY K+ + VVV G+P GV+F+ P ++++++
Sbjct: 868 LREQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMR 927
Query: 167 WILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGIS 226
IL++ I F + RPF PG+V + +V SES GP V E E S +
Sbjct: 928 RILDSAEFIKFTVIRPF---------PGLVIN--NQLVDQSESEGP--VIQESAEPSQLE 974
Query: 227 LKA-------EAVSVKKESEDPNY 243
+ A + S K+ DP +
Sbjct: 975 VPATEEIKETDGSSQIKQEPDPTW 998
Score = 55.1 bits (131), Expect = 3e-07
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 107 LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLK 166
L++ VE+ F G+ALG V VP+ V+GLPEGV F+ P + + L+
Sbjct: 733 LKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLE 792
Query: 167 WILENKAGISFIINRP 182
IL NKA I FII +P
Sbjct: 793 KILRNKAKIKFIIKKP 808
>gi|169881252 general transcription factor II, i isoform 4 [Homo
sapiens]
Length = 957
Score = 453 bits (1166), Expect = e-127
Identities = 252/441 (57%), Positives = 300/441 (68%), Gaps = 32/441 (7%)
Query: 1 MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTE 60
MAQVA+STLPVE+E SSE+RMVVTFL+SALESMCKELAKSKAEVACIAVYETDVFVVGTE
Sbjct: 1 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE 60
Query: 61 RGCAFVNARTDFQKDFAKYCVAEG-----LCEVKPPCPVNGMQVHSGETEILRKAVEDYF 115
RG AFVN R DFQKDF KYCV E + ++K N M V + E E LRK VEDYF
Sbjct: 61 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF 120
Query: 116 CFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGI 175
CFCYGKALG + +VPVPYEKMLRDQSAVVVQGLPEGVAF+HPENYDLATLKWILENKAGI
Sbjct: 121 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI 180
Query: 176 SFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVK 235
SFII RPFL P+ +GG MVTDA+RSI+SP SCGPI VKTEP EDSGISL+ AV+VK
Sbjct: 181 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK 240
Query: 236 KESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEP--NEDPEAEVKIEGNT 293
+ESEDP+YYQYN+QGSH SS NE EME+P ED PS+ P NE P+ V N
Sbjct: 241 EESEDPDYYQYNIQGSHHSSEGNEGTEMEVPAEDDDYSPPSKRPKANELPQPPVPEPANA 300
Query: 294 NSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFP 353
V + N + +I LR+QV +LF RK+ +AI P
Sbjct: 301 GKRK-------VREFNFEKWNA------------RITDLRKQVEELFERKYAQAIKAKGP 341
Query: 354 VKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLEL 413
V +PY + + ++G+P G+ F+ P I + RIL A E I+F + + EL
Sbjct: 342 VTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKH----EL 397
Query: 414 SNVGKR--KIDQEGRVFQEKW 432
N + ++D+ +E+W
Sbjct: 398 LNSTREDLQLDKPASGVKEEW 418
Score = 205 bits (521), Expect = 2e-52
Identities = 100/140 (71%), Positives = 118/140 (84%)
Query: 294 NSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFP 353
+S +V +A+GVEDLNI+QVT+PD++ ERLS +EK +QLREQVNDLFSRKFGEAIG+ FP
Sbjct: 789 SSPNVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFP 848
Query: 354 VKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLEL 413
VKVPYRKIT NPGCVV+DGMPPGV FKAP YLEISSMRRIL++AEFIKFTVIRP PGL +
Sbjct: 849 VKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRPFPGLVI 908
Query: 414 SNVGKRKIDQEGRVFQEKWE 433
+N + + EG V QE E
Sbjct: 909 NNQLVDQSESEGPVIQESAE 928
Score = 90.1 bits (222), Expect = 9e-18
Identities = 83/305 (27%), Positives = 131/305 (42%), Gaps = 23/305 (7%)
Query: 107 LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLK 166
LRK VE+ F Y +A+ V +PY + V+GLPEG+ F+ P Y + L+
Sbjct: 320 LRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLE 379
Query: 167 WILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGIS 226
IL K I F+I + L L ++ E K M D
Sbjct: 380 RILLAKERIRFVIKKHEL-----LNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFC 434
Query: 227 LK-AEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPN--EDP 283
K AEA+ + P Y +HP+ +L +E +P P+ P
Sbjct: 435 KKFAEALGSTEAKAVP----YQKFEAHPN---------DLYVEGLPENIPFRSPSWYGIP 481
Query: 284 EAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVP-DNEKERLSSIEKIKQLREQVNDLFSR 342
E I+ V + + +VT P N + +I +LR+QV ++F+
Sbjct: 482 RLEKIIQVGNRIKFVIKRPELLTH-STTEVTQPRTNTPVKEDWNVRITKLRKQVEEIFNL 540
Query: 343 KFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKF 402
KF +A+G+ VKVPY NP + ++G+P G+ F++P + I + RI+ + IKF
Sbjct: 541 KFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKF 600
Query: 403 TVIRP 407
V +P
Sbjct: 601 VVKKP 605
Score = 67.0 bits (162), Expect = 8e-11
Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
Query: 283 PEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIE----KIKQLREQVND 338
PE EV +EG N++ T++ N VP + R S E KI L+++V +
Sbjct: 641 PEIEVTVEGPNNNNPQTSAVRTPTQTN--GSNVPFKPRGREFSFEAWNAKITDLKQKVEN 698
Query: 339 LFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAE 398
LF+ K GEA+G+ VKVP+ P ++G+P GV F+ P I + +IL
Sbjct: 699 LFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKA 758
Query: 399 FIKFTVIRP 407
IKF + +P
Sbjct: 759 KIKFIIKKP 767
Score = 65.9 bits (159), Expect = 2e-10
Identities = 47/144 (32%), Positives = 73/144 (50%), Gaps = 20/144 (13%)
Query: 107 LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLK 166
LR+ V D F +G+A+G V VPY K+ + VVV G+P GV+F+ P ++++++
Sbjct: 827 LREQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMR 886
Query: 167 WILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGIS 226
IL++ I F + RPF PG+V + +V SES GP V E E S +
Sbjct: 887 RILDSAEFIKFTVIRPF---------PGLVIN--NQLVDQSESEGP--VIQESAEPSQLE 933
Query: 227 LKA-------EAVSVKKESEDPNY 243
+ A + S K+ DP +
Sbjct: 934 VPATEEIKETDGSSQIKQEPDPTW 957
Score = 55.1 bits (131), Expect = 3e-07
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 107 LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLK 166
L++ VE+ F G+ALG V VP+ V+GLPEGV F+ P + + L+
Sbjct: 692 LKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLE 751
Query: 167 WILENKAGISFIINRP 182
IL NKA I FII +P
Sbjct: 752 KILRNKAKIKFIIKKP 767
>gi|14670354 general transcription factor II, i isoform 3 [Homo
sapiens]
Length = 977
Score = 442 bits (1136), Expect = e-124
Identities = 252/461 (54%), Positives = 300/461 (65%), Gaps = 52/461 (11%)
Query: 1 MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTE 60
MAQVA+STLPVE+E SSE+RMVVTFL+SALESMCKELAKSKAEVACIAVYETDVFVVGTE
Sbjct: 1 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE 60
Query: 61 RGCAFVNARTDFQKDFAKYCVAEG-----LCEVKPPCPVNGMQVHSGETEILRKAVEDYF 115
RG AFVN R DFQKDF KYCV E + ++K N M V + E E LRK VEDYF
Sbjct: 61 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF 120
Query: 116 CFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGI 175
CFCYGKALG + +VPVPYEKMLRDQSAVVVQGLPEGVAF+HPENYDLATLKWILENKAGI
Sbjct: 121 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI 180
Query: 176 SFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVK 235
SFII RPFL P+ +GG MVTDA+RSI+SP SCGPI VKTEP EDSGISL+ AV+VK
Sbjct: 181 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK 240
Query: 236 KESEDPNYYQYN--------------------MQGSHPSSTSNEVIEMELPMEDSTPLVP 275
+ESEDP+YYQYN +QGSH SS NE EME+P ED P
Sbjct: 241 EESEDPDYYQYNIQAGPSETDDVDEKQPLSKPLQGSHHSSEGNEGTEMEVPAEDDDYSPP 300
Query: 276 SEEP--NEDPEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLR 333
S+ P NE P+ V N V + N + +I LR
Sbjct: 301 SKRPKANELPQPPVPEPANAGKRK-------VREFNFEKWNA------------RITDLR 341
Query: 334 EQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRI 393
+QV +LF RK+ +AI PV +PY + + ++G+P G+ F+ P I + RI
Sbjct: 342 KQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERI 401
Query: 394 LEAAEFIKFTVIRPLPGLELSNVGKR--KIDQEGRVFQEKW 432
L A E I+F + + EL N + ++D+ +E+W
Sbjct: 402 LLAKERIRFVIKKH----ELLNSTREDLQLDKPASGVKEEW 438
Score = 205 bits (521), Expect = 2e-52
Identities = 100/140 (71%), Positives = 118/140 (84%)
Query: 294 NSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFP 353
+S +V +A+GVEDLNI+QVT+PD++ ERLS +EK +QLREQVNDLFSRKFGEAIG+ FP
Sbjct: 809 SSPNVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFP 868
Query: 354 VKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLEL 413
VKVPYRKIT NPGCVV+DGMPPGV FKAP YLEISSMRRIL++AEFIKFTVIRP PGL +
Sbjct: 869 VKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRPFPGLVI 928
Query: 414 SNVGKRKIDQEGRVFQEKWE 433
+N + + EG V QE E
Sbjct: 929 NNQLVDQSESEGPVIQESAE 948
Score = 90.1 bits (222), Expect = 9e-18
Identities = 83/305 (27%), Positives = 131/305 (42%), Gaps = 23/305 (7%)
Query: 107 LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLK 166
LRK VE+ F Y +A+ V +PY + V+GLPEG+ F+ P Y + L+
Sbjct: 340 LRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLE 399
Query: 167 WILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGIS 226
IL K I F+I + L L ++ E K M D
Sbjct: 400 RILLAKERIRFVIKKHEL-----LNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFC 454
Query: 227 LK-AEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPN--EDP 283
K AEA+ + P Y +HP+ +L +E +P P+ P
Sbjct: 455 KKFAEALGSTEAKAVP----YQKFEAHPN---------DLYVEGLPENIPFRSPSWYGIP 501
Query: 284 EAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVP-DNEKERLSSIEKIKQLREQVNDLFSR 342
E I+ V + + +VT P N + +I +LR+QV ++F+
Sbjct: 502 RLEKIIQVGNRIKFVIKRPELLTH-STTEVTQPRTNTPVKEDWNVRITKLRKQVEEIFNL 560
Query: 343 KFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKF 402
KF +A+G+ VKVPY NP + ++G+P G+ F++P + I + RI+ + IKF
Sbjct: 561 KFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKF 620
Query: 403 TVIRP 407
V +P
Sbjct: 621 VVKKP 625
Score = 67.0 bits (162), Expect = 8e-11
Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
Query: 283 PEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIE----KIKQLREQVND 338
PE EV +EG N++ T++ N VP + R S E KI L+++V +
Sbjct: 661 PEIEVTVEGPNNNNPQTSAVRTPTQTN--GSNVPFKPRGREFSFEAWNAKITDLKQKVEN 718
Query: 339 LFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAE 398
LF+ K GEA+G+ VKVP+ P ++G+P GV F+ P I + +IL
Sbjct: 719 LFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKA 778
Query: 399 FIKFTVIRP 407
IKF + +P
Sbjct: 779 KIKFIIKKP 787
Score = 65.9 bits (159), Expect = 2e-10
Identities = 47/144 (32%), Positives = 73/144 (50%), Gaps = 20/144 (13%)
Query: 107 LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLK 166
LR+ V D F +G+A+G V VPY K+ + VVV G+P GV+F+ P ++++++
Sbjct: 847 LREQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMR 906
Query: 167 WILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGIS 226
IL++ I F + RPF PG+V + +V SES GP V E E S +
Sbjct: 907 RILDSAEFIKFTVIRPF---------PGLVIN--NQLVDQSESEGP--VIQESAEPSQLE 953
Query: 227 LKA-------EAVSVKKESEDPNY 243
+ A + S K+ DP +
Sbjct: 954 VPATEEIKETDGSSQIKQEPDPTW 977
Score = 55.1 bits (131), Expect = 3e-07
Identities = 31/76 (40%), Positives = 42/76 (55%)
Query: 107 LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLK 166
L++ VE+ F G+ALG V VP+ V+GLPEGV F+ P + + L+
Sbjct: 712 LKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLE 771
Query: 167 WILENKAGISFIINRP 182
IL NKA I FII +P
Sbjct: 772 KILRNKAKIKFIIKKP 787
>gi|7662294 EPM2A interacting protein 1 [Homo sapiens]
Length = 607
Score = 205 bits (522), Expect = 1e-52
Identities = 160/584 (27%), Positives = 274/584 (46%), Gaps = 56/584 (9%)
Query: 418 KRKIDQEGRVFQEKWERAYFFVEVQ--NIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYD 475
K ++D E VF+ +W + Y VE + CL+C++ + ++E ++RRHY+ H ++Y+
Sbjct: 9 KMEVD-EALVFRPEWTQRYLVVEPPEGDGALCLVCRRLIVATRERDVRRHYEAEH-EYYE 66
Query: 476 QYT---------ERMR-----------DEKLHELKKGLRKYLL--------GSSDTEC-- 505
+Y ER+R +E+ GL + L G +C
Sbjct: 67 RYVADGERAALVERLRQGDLPVASFTPEERAARAGLGLCRLLALKGRGWGEGDFVYQCME 126
Query: 506 -------PEQKQVFANPSPTQKSPVQPVEDLAGNLWEKLREKIRSFVAYSIAIDEITDIN 558
PE V + Q + + NL +L + R F AYS+A+D+ +
Sbjct: 127 VLLREVLPEHVSVLQGVDLSPDITRQRILSIDRNLRNQLFNRARDFKAYSLALDDQAFVA 186
Query: 559 NTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFLRVEKSLKKFCINWSRLVSVAS 618
L +FIRGV +V E+LL + +T S + + +SL+ ++ R+V + +
Sbjct: 187 YENYLLVFIRGVGPELEVQEDLLTIINLTHHFSVGALMSAILESLQTAGLSLQRMVGLTT 246
Query: 619 TGTPAMVDANNGLVTKLKSR-VATFCKGAELKSICCIIHPESLCAQKLKMDHVMDVVVKS 677
T T M+ N+GLV+ ++ + V+ C S +H E L + + ++ +++ + +
Sbjct: 247 THTLRMIGENSGLVSYMREKAVSPNCWNVIHYS--GFLHLELLSSYDVDVNQIINTISEW 304
Query: 678 VNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIK-WLSRGLVLKRFFESLEEIDSFMSS 736
+ I +RG+ EF TLL E +S++G + + WL RG LK F +E+++F+ S
Sbjct: 305 IVLIKTRGVRRPEFQTLLTESESEHGERVNGRCLNNWLRRGKTLKLIFSLRKEMEAFLVS 364
Query: 737 RGKPLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQMYDLIRAFLAKLCLWET 796
G S W+ D FLVD+ HL L+ L+ +D I F KL L++
Sbjct: 365 VGATTVHFSDKQWLCDFGFLVDIMEHLRELSEELRVSKVFAAAAFDHICTFEVKLNLFQR 424
Query: 797 HLTRNNLAHFPTLK-----LVSRNESDGLNYIPK-----IAELKTEFQKRLSDFKLYESE 846
H+ NL FP L+ L +N+ D + P I L+ EF++ D + + +
Sbjct: 425 HIEEKNLTDFPALREVVDELKQQNKEDEKIFDPDRYQMVICRLQKEFERHFKDLRFIKKD 484
Query: 847 LTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWG-SYPKYKHHC 905
L LFS+PF+ K + +++E+ LQ NT L +Y + +FY L SYP K
Sbjct: 485 LELFSNPFNFKPEYAPISVRVELTKLQANTNLWNEYRIKDLGQFYAGLSAESYPIIKGVA 544
Query: 906 AKILSMFGSTYICEQLFSIMKLSKTKYCSQLKDSQWDSVLHIAT 949
K+ S+F S ICE+ FS + ++ L D ++ +AT
Sbjct: 545 CKVASLFDSNQICEKAFSYLTRNQHTLSQPLTDEHLQALFRVAT 588
>gi|7705387 GTF2I repeat domain containing 1 isoform 1 [Homo
sapiens]
Length = 959
Score = 181 bits (459), Expect = 3e-45
Identities = 131/412 (31%), Positives = 189/412 (45%), Gaps = 43/412 (10%)
Query: 22 VVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTERGCAFVNARTDFQKDFAKYCV 81
++T LVSAL+SMC L+K AEVAC+AV++ FVVGTE+G F+NAR + Q DF ++C
Sbjct: 30 IITSLVSALDSMCSALSKLNAEVACVAVHDESAFVVGTEKGRMFLNARKELQSDFLRFCR 89
Query: 82 AEGLCEVKPPCPVNGMQ-------------VHSGETEILRKAVEDYFCFCYGKALGTTVM 128
+ + P + H + +LRK VE+ F Y +ALG +
Sbjct: 90 GPPWKDPEAEHPKKVQRGEGGGRSLPRSSLEHGSDVYLLRKMVEEVFDVLYSEALGRASV 149
Query: 129 VPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFIINRPFLGPES 188
VP+PYE++LR+ + VQGLPEG+AF+ P YD L ILE+ I F + RP
Sbjct: 150 VPLPYERLLREPGLLAVQGLPEGLAFRRPAEYDPKALMAILEHSHRIRFKLKRP------ 203
Query: 189 QLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVKKESEDPNYYQYNM 248
+ D R + E G V P L +A V + P +M
Sbjct: 204 -------LEDGGRDSKALVELNG---VSLIPKGSRDCGLHGQAPKVPPQDLPPTATSSSM 253
Query: 249 QG-SHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTNS------ 301
+ ++ N I S PL PS+ P E K G + S
Sbjct: 254 ASFLYSTALPNHAIRELKQEAPSCPLAPSDLGLSRPMPEPKATGAQDFSDCCGQKPTGPG 313
Query: 302 ---AAGVEDLNIVQVTVPDNEKER----LSSIEKIKQLREQVNDLFSRKFGEAIGVDFPV 354
V + ++ ++ E+ + E I LRE V LF+ ++ EA+G+D V
Sbjct: 314 GPLIQNVHASKRILFSIVHDKSEKWDAFIKETEDINTLRECVQILFNSRYAEALGLDHMV 373
Query: 355 KVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIR 406
VPYRKI +P V I G+P + FK P + ++RILE I F + R
Sbjct: 374 PVPYRKIACDPEAVEIVGIPDKIPFKRPCTYGVPKLKRILEERHSIHFIIKR 425
Score = 136 bits (342), Expect = 1e-31
Identities = 104/345 (30%), Positives = 154/345 (44%), Gaps = 94/345 (27%)
Query: 100 HSGETEILRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPEN 159
H LRK VE F Y KA+G + V VPY K L + V GLPEG++ + P
Sbjct: 558 HGDVIRPLRKQVELLFNTRYAKAIGISEPVKVPYSKFLMHPEELFVVGLPEGISLRRPNC 617
Query: 160 YDLATLKWILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEP 219
+ +A L+ ILE I F+I R P ++T+ + EP
Sbjct: 618 FGIAKLRKILEASNSIQFVIKR-----------PELLTEGVK----------------EP 650
Query: 220 MEDSGISLKAEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEP 279
+ DS QG+ S + S P +P E
Sbjct: 651 IMDS-------------------------QGTASS------------LGFSPPALPPERD 673
Query: 280 NEDPEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDL 339
+ DP + D ++ + +N RLS I+ LREQV DL
Sbjct: 674 SGDP---------------------LVDESLKRQGFQENYDARLSRIDIANTLREQVQDL 712
Query: 340 FSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEF 399
F++K+GEA+G+ +PV+VPY++I NPG V+I+G+PPG+ F+ P ++ RIL A+
Sbjct: 713 FNKKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADK 772
Query: 400 IKFTVIRPLPGL-------ELSNVGKRKI--DQEGRVFQEKWERA 435
IKFTV RP GL + + +G++ I +Q +F EK+ A
Sbjct: 773 IKFTVTRPFQGLIPKPDEDDANRLGEKVILREQVKELFNEKYGEA 817
Score = 118 bits (296), Expect = 2e-26
Identities = 99/324 (30%), Positives = 143/324 (44%), Gaps = 57/324 (17%)
Query: 107 LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLK 166
LR+ V+ F Y +ALG MVPVPY K+ D AV + G+P+ + F+ P Y + LK
Sbjct: 351 LRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIVGIPDKIPFKRPCTYGVPKLK 410
Query: 167 WILENKAGISFIINRPF----------------LGPESQLGGPGMVTDAERSIVSPSESC 210
ILE + I FII R F L P S P T AE S + +
Sbjct: 411 RILEERHSIHFIIKRMFDERIFTGNKFTKDTTKLEPAS----PPEDTSAEVSRATVLDLA 466
Query: 211 GPINVKTEPM-EDSGISLKAEAVS---VKKESEDPNYYQYNMQGSHPSSTSNEVIEMELP 266
G M ED G E +K E ED + Q + P+S
Sbjct: 467 GNARSDKGSMSEDCGPGTSGELGGLRPIKIEPEDLDIIQVTVPDPSPTS----------- 515
Query: 267 MEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTNSAAGVE---DLNIVQVTVPDNEKERL 323
E+ T +P P+ED S G+E D + + P+
Sbjct: 516 -EEMTDSMPGHLPSED------------------SGYGMEMLTDKGLSEDARPEERPVED 556
Query: 324 SSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPG 383
S + I+ LR+QV LF+ ++ +AIG+ PVKVPY K +P + + G+P G+ + P
Sbjct: 557 SHGDVIRPLRKQVELLFNTRYAKAIGISEPVKVPYSKFLMHPEELFVVGLPEGISLRRPN 616
Query: 384 YLEISSMRRILEAAEFIKFTVIRP 407
I+ +R+ILEA+ I+F + RP
Sbjct: 617 CFGIAKLRKILEASNSIQFVIKRP 640
Score = 56.2 bits (134), Expect = 1e-07
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 102 GETEILRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQ-SAVVVQGLPEGVAFQHPENY 160
GE ILR+ V++ F YG+ALG V VPY K++RD AV V GLP+ + F++P Y
Sbjct: 797 GEKVILREQVKELFNEKYGEALGLNRPVLVPY-KLIRDSPDAVEVTGLPDDIPFRNPNTY 855
Query: 161 DLATLKWILENKAGISFII 179
D+ L+ IL+ + + +I
Sbjct: 856 DIHRLEKILKAREHVRMVI 874
Score = 54.3 bits (129), Expect = 5e-07
Identities = 25/77 (32%), Positives = 44/77 (57%)
Query: 332 LREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMR 391
LR+ V ++F + EA+G V +PY ++ PG + + G+P G+ F+ P + ++
Sbjct: 128 LRKMVEEVFDVLYSEALGRASVVPLPYERLLREPGLLAVQGLPEGLAFRRPAEYDPKALM 187
Query: 392 RILEAAEFIKFTVIRPL 408
ILE + I+F + RPL
Sbjct: 188 AILEHSHRIRFKLKRPL 204
>gi|15011924 GTF2I repeat domain containing 1 isoform 2 [Homo
sapiens]
Length = 944
Score = 181 bits (459), Expect = 3e-45
Identities = 131/412 (31%), Positives = 189/412 (45%), Gaps = 43/412 (10%)
Query: 22 VVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTERGCAFVNARTDFQKDFAKYCV 81
++T LVSAL+SMC L+K AEVAC+AV++ FVVGTE+G F+NAR + Q DF ++C
Sbjct: 30 IITSLVSALDSMCSALSKLNAEVACVAVHDESAFVVGTEKGRMFLNARKELQSDFLRFCR 89
Query: 82 AEGLCEVKPPCPVNGMQ-------------VHSGETEILRKAVEDYFCFCYGKALGTTVM 128
+ + P + H + +LRK VE+ F Y +ALG +
Sbjct: 90 GPPWKDPEAEHPKKVQRGEGGGRSLPRSSLEHGSDVYLLRKMVEEVFDVLYSEALGRASV 149
Query: 129 VPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFIINRPFLGPES 188
VP+PYE++LR+ + VQGLPEG+AF+ P YD L ILE+ I F + RP
Sbjct: 150 VPLPYERLLREPGLLAVQGLPEGLAFRRPAEYDPKALMAILEHSHRIRFKLKRP------ 203
Query: 189 QLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVKKESEDPNYYQYNM 248
+ D R + E G V P L +A V + P +M
Sbjct: 204 -------LEDGGRDSKALVELNG---VSLIPKGSRDCGLHGQAPKVPPQDLPPTATSSSM 253
Query: 249 QG-SHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTNS------ 301
+ ++ N I S PL PS+ P E K G + S
Sbjct: 254 ASFLYSTALPNHAIRELKQEAPSCPLAPSDLGLSRPMPEPKATGAQDFSDCCGQKPTGPG 313
Query: 302 ---AAGVEDLNIVQVTVPDNEKER----LSSIEKIKQLREQVNDLFSRKFGEAIGVDFPV 354
V + ++ ++ E+ + E I LRE V LF+ ++ EA+G+D V
Sbjct: 314 GPLIQNVHASKRILFSIVHDKSEKWDAFIKETEDINTLRECVQILFNSRYAEALGLDHMV 373
Query: 355 KVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIR 406
VPYRKI +P V I G+P + FK P + ++RILE I F + R
Sbjct: 374 PVPYRKIACDPEAVEIVGIPDKIPFKRPCTYGVPKLKRILEERHSIHFIIKR 425
Score = 118 bits (296), Expect = 2e-26
Identities = 99/324 (30%), Positives = 143/324 (44%), Gaps = 57/324 (17%)
Query: 107 LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLK 166
LR+ V+ F Y +ALG MVPVPY K+ D AV + G+P+ + F+ P Y + LK
Sbjct: 351 LRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIVGIPDKIPFKRPCTYGVPKLK 410
Query: 167 WILENKAGISFIINRPF----------------LGPESQLGGPGMVTDAERSIVSPSESC 210
ILE + I FII R F L P S P T AE S + +
Sbjct: 411 RILEERHSIHFIIKRMFDERIFTGNKFTKDTTKLEPAS----PPEDTSAEVSRATVLDLA 466
Query: 211 GPINVKTEPM-EDSGISLKAEAVS---VKKESEDPNYYQYNMQGSHPSSTSNEVIEMELP 266
G M ED G E +K E ED + Q + P+S
Sbjct: 467 GNARSDKGSMSEDCGPGTSGELGGLRPIKIEPEDLDIIQVTVPDPSPTS----------- 515
Query: 267 MEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTNSAAGVE---DLNIVQVTVPDNEKERL 323
E+ T +P P+ED S G+E D + + P+
Sbjct: 516 -EEMTDSMPGHLPSED------------------SGYGMEMLTDKGLSEDARPEERPVED 556
Query: 324 SSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPG 383
S + I+ LR+QV LF+ ++ +AIG+ PVKVPY K +P + + G+P G+ + P
Sbjct: 557 SHGDVIRPLRKQVELLFNTRYAKAIGISEPVKVPYSKFLMHPEELFVVGLPEGISLRRPN 616
Query: 384 YLEISSMRRILEAAEFIKFTVIRP 407
I+ +R+ILEA+ I+F + RP
Sbjct: 617 CFGIAKLRKILEASNSIQFVIKRP 640
Score = 111 bits (277), Expect = 4e-24
Identities = 93/336 (27%), Positives = 148/336 (44%), Gaps = 36/336 (10%)
Query: 100 HSGETEILRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPEN 159
H LRK VE F Y KA+G + V VPY K L + V GLPEG++ + P
Sbjct: 558 HGDVIRPLRKQVELLFNTRYAKAIGISEPVKVPYSKFLMHPEELFVVGLPEGISLRRPNC 617
Query: 160 YDLATLKWILENKAGISFIINRPFL-----------GPESQLGGPGMVTDAERSIVSPSE 208
+ +A L+ ILE I F+I RP L E G P + +R +
Sbjct: 618 FGIAKLRKILEASNSIQFVIKRPELLTEGVKEPIVDSQERDSGDPLVDESLKRQGFQENY 677
Query: 209 SC-----GPINVKTEPMEDSGISLKAEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEM 263
N E ++D EA+ +K + P Y S+P S E +
Sbjct: 678 DARLSRIDIANTLREQVQDLFNKKYGEALGIKYPVQVP----YKRIKSNPGSVIIEGLPP 733
Query: 264 ELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERL 323
+P P +++ E + + + VT G+ +P +++
Sbjct: 734 GIPFRK-----PCTFGSQNLERILAVADKIKFT-VTRPFQGL---------IPKPDEDDA 778
Query: 324 SSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPG 383
+ + + LREQV +LF+ K+GEA+G++ PV VPY+ I +P V + G+P + F+ P
Sbjct: 779 NRLGEKVILREQVKELFNEKYGEALGLNRPVLVPYKLIRDSPDAVEVTGLPDDIPFRNPN 838
Query: 384 YLEISSMRRILEAAEFIKFTVIRPL-PGLELSNVGK 418
+I + +IL+A E ++ +I L P E+ N K
Sbjct: 839 TYDIHRLEKILKAREHVRMVIINQLQPFAEICNDAK 874
Score = 106 bits (264), Expect = 1e-22
Identities = 55/128 (42%), Positives = 82/128 (64%), Gaps = 9/128 (7%)
Query: 317 DNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPG 376
+N RLS I+ LREQV DLF++K+GEA+G+ +PV+VPY++I NPG V+I+G+PPG
Sbjct: 675 ENYDARLSRIDIANTLREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPG 734
Query: 377 VVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGL-------ELSNVGKRKI--DQEGRV 427
+ F+ P ++ RIL A+ IKFTV RP GL + + +G++ I +Q +
Sbjct: 735 IPFRKPCTFGSQNLERILAVADKIKFTVTRPFQGLIPKPDEDDANRLGEKVILREQVKEL 794
Query: 428 FQEKWERA 435
F EK+ A
Sbjct: 795 FNEKYGEA 802
Score = 54.3 bits (129), Expect = 5e-07
Identities = 25/77 (32%), Positives = 44/77 (57%)
Query: 332 LREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMR 391
LR+ V ++F + EA+G V +PY ++ PG + + G+P G+ F+ P + ++
Sbjct: 128 LRKMVEEVFDVLYSEALGRASVVPLPYERLLREPGLLAVQGLPEGLAFRRPAEYDPKALM 187
Query: 392 RILEAAEFIKFTVIRPL 408
ILE + I+F + RPL
Sbjct: 188 AILEHSHRIRFKLKRPL 204
>gi|115511046 zinc finger protein 258 [Homo sapiens]
Length = 1325
Score = 157 bits (398), Expect = 3e-38
Identities = 150/569 (26%), Positives = 262/569 (46%), Gaps = 47/569 (8%)
Query: 382 PGYLEISSMRRILEAAEFIKFTVIRPLPGLELSNVGKRKIDQEGRVFQEKWERAYFFVEV 441
PG E S + + E + ++P LS+ K K + + +E+ +E
Sbjct: 757 PGSKESSPRPQCVICGEILSSENMKPA---NLSHHLKTKHSELENKPVDFFEQKSLEMEC 813
Query: 442 QN--IPTCLICKQSMSVSKEYNLRRHYQTNHSKHYDQYTERMRDEKLHELKKGLRKYLLG 499
QN + CL+ ++S+ V Y + +QT SK E + L E+ + LG
Sbjct: 814 QNSSLKKCLLVEKSL-VKASYLIA--FQTAASKKPFSIAEELIKPYLVEMCSEV----LG 866
Query: 500 SSDTECPEQKQVFANPSPTQKSPVQP-VEDLAGNLWEKLREKIRSFVAYSIAIDEITDIN 558
SS + + K + P +Q +++L+ ++ ++L +K+R +++ IDE ++I+
Sbjct: 867 SSAGD--KMKTI-----PLSNVTIQHRIDELSADIEDQLIQKVRESKWFALQIDESSEIS 919
Query: 559 NTTQLAIFIRGVDENF-DVSEELLDTVPMTGTKSGNEIFLRVEKSLKKFCINWSRLVSVA 617
N T L +IR +D + DV EELL + M +G EIF + K + +NW V +
Sbjct: 920 NITLLLCYIRFIDYDCRDVKEELLFCIEMPTQITGFEIFELINKYIDSKSLNWKHCVGLC 979
Query: 618 STGTPAMVDANNGLVTKLKS---RVATFCKGAELKSICCIIHPESLCAQKLK--MDHVMD 672
+ G +M +GL K++ A F C IH E L A+KL + ++
Sbjct: 980 TDGAASMTGRYSGLKAKIQEVAMNTAAFTH--------CFIHRERLVAEKLSPCLHKILL 1031
Query: 673 VVVKSVNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIKWLSRGLVLKRFFESLEEIDS 732
+ +++I S LN T L E+ S++ SL + E++W+SRG +LKR FE EI+
Sbjct: 1032 QSAQILSFIKSNALNSRMLTILCEEMGSEHVSLPLHAEVRWISRGRMLKRLFELRHEIEI 1091
Query: 733 FMSSRGKPLPQ-LSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQMYDLIRAFLAKL 791
F+S + L + +W+ LA+L D+ +N LN+SLQG + + I F KL
Sbjct: 1092 FLSQKHSDLAKYFHDEEWVGKLAYLSDIFSLINELNLSLQGTLTTFFNLCNKIDVFKRKL 1151
Query: 792 CLWETHLTRNNLAHFPTLKLVSRNESDGLNYIPKIAELKTEFQKRLS---------DFKL 842
+W N+ FP+ S S GLN + I + E + LS + L
Sbjct: 1152 KMWLKRTQENDYDMFPSFSEFS--NSSGLN-MTDITRIIFEHLEGLSQVFSDCFPPEQDL 1208
Query: 843 YESELTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPKYK 902
L + + + +++ + + ++ +L + L+ + V + +F+ SYP+
Sbjct: 1209 RSGNLWIIHPFMNHQNNNLTDFEEEKLTELSSDLGLQALFKSVSVTQFWINAKTSYPELH 1268
Query: 903 HHCAKILSMFGSTYICEQLFSIMKLSKTK 931
K L F + Y+C+ FS + SK K
Sbjct: 1269 ERAMKFLLPFSTVYLCDAAFSALTESKQK 1297
>gi|46195755 SCAN domain containing 3 [Homo sapiens]
Length = 1325
Score = 155 bits (393), Expect = 1e-37
Identities = 145/594 (24%), Positives = 259/594 (43%), Gaps = 84/594 (14%)
Query: 415 NVGKRKIDQEGRV------FQEKWERAYF---FVEVQN----IPTCLICKQSMS--VSKE 459
NV R +EG+ F K++ +Y FV V + P C+IC ++ K
Sbjct: 714 NVNNRSYPEEGKTKRVHASFTRKYDPSYIEFGFVAVIDGEVLKPQCIICGDVLANEAMKP 773
Query: 460 YNLRRHYQTNHSKHYDQYTERMRDEKLHELKKGLRK-YLLGSSDTECPEQKQVFANPSPT 518
L+RH + H K + + K ELK ++ + + + A P
Sbjct: 774 SKLKRHLYSKH-KEISSQPKEFFERKSSELKSQPKQVFNVSHINISALRASYKVALPVAK 832
Query: 519 QKSP--------------------------------------VQPVEDLAGNLWEKLREK 540
K+P + +++LA ++ ++L E+
Sbjct: 833 SKTPYTIAETLVKDCIKEVCLEMLGESAAKKVAQVPLSNDTIARRIQELANDMEDQLIEQ 892
Query: 541 IRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFLRVE 600
I+ +S+ +DE DI N L +++R + + D+ EE + + + +E++ V+
Sbjct: 893 IKLAKYFSLQLDECRDIANMIILLVYVR-FEHDDDIKEEFFFSASLPTNTTSSELYEAVK 951
Query: 601 KSLKKFC-INWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAELKSICCIIHPES 659
+ C + + V V S G +M ++ +VT++K E K+ C IH ES
Sbjct: 952 NYIVNKCGLEFKFCVGVCSDGAASMTGKHSEVVTQIKELAP------ECKTTHCFIHRES 1005
Query: 660 LCAQKL--KMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIKWLSRG 717
L +K+ +++ V++ +VK VN+I S LN F+ L +++ + LL + EI+WLSRG
Sbjct: 1006 LAMKKISAELNSVLNDIVKIVNYIKSNSLNSRLFSLLCDNMEADHKQLLLHAEIRWLSRG 1065
Query: 718 LVLKRFFESLEEIDSFMSSRGKPLPQL-SSIDWIRDLAFLVDMTMHLNALNISLQGHSQI 776
VL R FE E+ F+ + QL ++W LA+L D+ N LN S+QG +
Sbjct: 1066 KVLSRMFEIRNELLVFLQGKKPMWSQLFKDVNWTARLAYLSDIFSIFNDLNASMQGKNAT 1125
Query: 777 VTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLKLVSRNESDGLNYIPKIAELKTEFQKR 836
M D + KL W+ ++ + F L + + L+ IA L+ +
Sbjct: 1126 YFSMADKVEGQKQKLEAWKNRISTDCYDMFHNLTTIINEVGNDLD----IAHLRKVISEH 1181
Query: 837 LSD----FKLYESEL-------TLFSSPFSTKIDSVH--EELQMEVIDLQCNTVLKTKYD 883
L++ F+ Y +PF + D+++ LQ +++ L + LK ++
Sbjct: 1182 LTNLLECFEFYFPSKEDPRIGNLWIQNPFLSSKDNLNLTVTLQDKLLKLATDEGLKISFE 1241
Query: 884 K-VGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQL 936
+P F+ YP+ K+L +F STY+CE FS + + KTK+ + L
Sbjct: 1242 NTASLPSFWIKAKNDYPELAEIALKLLLLFPSTYLCETGFSTLSVIKTKHRNSL 1295
>gi|219521826 zinc finger, BED-type containing 5 [Homo sapiens]
Length = 693
Score = 152 bits (384), Expect = 1e-36
Identities = 114/418 (27%), Positives = 200/418 (47%), Gaps = 14/418 (3%)
Query: 526 VEDLAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVP 585
++DLA ++ E+L +++ +S+ +DE D++ L +F+R N + E+LL
Sbjct: 252 IKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVR-YRFNKSIEEDLLLCES 310
Query: 586 MTGTKSGNEIFLRVEKSLKKFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCKG 645
+ +G EIF + ++K I W + V V S + A VD L VA
Sbjct: 311 LQSNATGEEIFNCINSFMQKHEIEWEKCVDVCSDASRA-VDGKIAEAVTLIKYVAP---- 365
Query: 646 AELKSICCIIHPESLCAQKL--KMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYG 703
E S C+++ +L + + + +V+D V+ +N+I +R L E+ +Q+
Sbjct: 366 -ESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIKARPHQSRLLKILCEEMGAQHT 424
Query: 704 SLLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHL 763
+LL TE++WLSRG VL R FE E+ FM S + L++ W+ LA+L D+ L
Sbjct: 425 ALLLNTEVRWLSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRLAYLADIFTKL 484
Query: 764 NALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLK--LVSRNESDGLN 821
N +N+S+QG + V ++D + + L KL W + + N FPTL L N + +
Sbjct: 485 NEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEENFDCFPTLSDFLTEINSTVDKD 544
Query: 822 YIPKIAE-LKTEFQKRLSDFKLYESELTLFSSPFSTKID--SVHEELQMEVIDLQCNTVL 878
I + L+ L F + +PF+ + S+ +IDL ++ +
Sbjct: 545 ICSAIVQHLRGLRATLLKYFPVTNDNNAWVRNPFTVTVKPASLVARDYESLIDLTSDSQV 604
Query: 879 KTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQL 936
K + ++ + +F+ L YP ++L F + ++CE FS +KTKY +L
Sbjct: 605 KQNFSELSLNDFWSSLIQEYPSIARRAVRVLLPFATMHLCETGFSYYAATKTKYRKRL 662
>gi|49574210 zinc finger, BED-type containing 5 [Homo sapiens]
Length = 693
Score = 152 bits (384), Expect = 1e-36
Identities = 114/418 (27%), Positives = 200/418 (47%), Gaps = 14/418 (3%)
Query: 526 VEDLAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVP 585
++DLA ++ E+L +++ +S+ +DE D++ L +F+R N + E+LL
Sbjct: 252 IKDLAADIEEELVCRLKICDGFSLQLDESADVSGLAVLLVFVR-YRFNKSIEEDLLLCES 310
Query: 586 MTGTKSGNEIFLRVEKSLKKFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCKG 645
+ +G EIF + ++K I W + V V S + A VD L VA
Sbjct: 311 LQSNATGEEIFNCINSFMQKHEIEWEKCVDVCSDASRA-VDGKIAEAVTLIKYVAP---- 365
Query: 646 AELKSICCIIHPESLCAQKL--KMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYG 703
E S C+++ +L + + + +V+D V+ +N+I +R L E+ +Q+
Sbjct: 366 -ESTSSHCLLYRHALAVKIMPTSLKNVLDQAVQIINYIKARPHQSRLLKILCEEMGAQHT 424
Query: 704 SLLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHL 763
+LL TE++WLSRG VL R FE E+ FM S + L++ W+ LA+L D+ L
Sbjct: 425 ALLLNTEVRWLSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRLAYLADIFTKL 484
Query: 764 NALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLK--LVSRNESDGLN 821
N +N+S+QG + V ++D + + L KL W + + N FPTL L N + +
Sbjct: 485 NEVNLSMQGKNVTVFTVFDKMSSLLRKLEFWASSVEEENFDCFPTLSDFLTEINSTVDKD 544
Query: 822 YIPKIAE-LKTEFQKRLSDFKLYESELTLFSSPFSTKID--SVHEELQMEVIDLQCNTVL 878
I + L+ L F + +PF+ + S+ +IDL ++ +
Sbjct: 545 ICSAIVQHLRGLRATLLKYFPVTNDNNAWVRNPFTVTVKPASLVARDYESLIDLTSDSQV 604
Query: 879 KTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQL 936
K + ++ + +F+ L YP ++L F + ++CE FS +KTKY +L
Sbjct: 605 KQNFSELSLNDFWSSLIQEYPSIARRAVRVLLPFATMHLCETGFSYYAATKTKYRKRL 662
>gi|239746033 PREDICTED: hypothetical protein XP_002344174 [Homo
sapiens]
Length = 145
Score = 149 bits (375), Expect = 2e-35
Identities = 92/182 (50%), Positives = 105/182 (57%), Gaps = 38/182 (20%)
Query: 1 MAQVAVSTLPVEEESSSETRMVVTFLVSALESM-CKELAKSKAEVACIAVYETDVFVVGT 59
MAQV VSTL +E+E S E+RMVVTFL+SALES C + K E C +Y V+ G
Sbjct: 1 MAQVLVSTLSIEDEDSYESRMVVTFLMSALESTDCFRVWILKQE--CTLIYHKKVYNPGE 58
Query: 60 ERGCAFVNARTDFQKDFAKYCVAEGLCEVKPPCPVNGMQVHSGETEILRKAVEDYFCFCY 119
C C NG +K VEDYFCFC
Sbjct: 59 SDECR---------------------------CCRNG--------NTRKKTVEDYFCFCC 83
Query: 120 GKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFII 179
KAL VPVPYEKML+DQSA++VQGLPEGVAF+HPENYDLATL+WILE AGISFII
Sbjct: 84 RKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEWILEYTAGISFII 143
Query: 180 NR 181
R
Sbjct: 144 KR 145
Score = 41.6 bits (96), Expect = 0.004
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 333 REQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRR 392
++ V D F +A+ V VPY K+ + +++ G+P GV FK P +++++
Sbjct: 72 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 131
Query: 393 ILEAAEFIKFTVIR 406
ILE I F + R
Sbjct: 132 ILEYTAGISFIIKR 145
>gi|223633919 hypothetical protein LOC285550 [Homo sapiens]
Length = 657
Score = 148 bits (373), Expect = 3e-35
Identities = 139/550 (25%), Positives = 247/550 (44%), Gaps = 72/550 (13%)
Query: 445 PTCLICKQSMSVS--KEYNLRRHYQTNHSKHYDQYTERMRDEKLHELKKGLR-------- 494
P C+IC ++ K L+RH +T H++ D+ E + +K ++K +
Sbjct: 84 PQCVICNNILANESLKPSKLKRHLETQHAELIDKPLEYFQRKK-KDIKLSTQFLSCSTAV 142
Query: 495 --KYLLGSSDTECPEQKQVFANPS------PTQKSPVQPVED------------------ 528
K LL S K+ AN + P V+ + D
Sbjct: 143 SEKALLSSYLVAYRVAKEKIANTAAEKIILPACLDMVRTIFDDKSADKLKTIPNDNTVSL 202
Query: 529 ----LAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTV 584
+A +L L +++S + ++I +DE TDI + T L +++R ++ D E+ L +
Sbjct: 203 RICTIAEHLETMLITRLQSGIDFAIQLDESTDIGSCTTLLVYVRYAWQD-DFLEDFLCFL 261
Query: 585 PMTGTKSGNEIFLRVEKSLK-KFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFC 643
+T SG +IF +E+ + ++ +NW + S GT M ++ ++ KL +
Sbjct: 262 NLTSHLSGLDIFTELERRIVGQYKLNWKNCKGITSDGTATMTGKHSRVIKKL---LEVTN 318
Query: 644 KGAELKSICCIIHPESLCAQKLKMD--HVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQ 701
GA C IH E L ++++ + V+ VK VN+I LN T E+ +
Sbjct: 319 NGAVWNH--CFIHREGLASREIPQNLMEVLKNAVKVVNFIKGSSLNSRLLETFCSEIGTN 376
Query: 702 YGSLLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQLSSID-WIRDLAFLVDMT 760
+ LLY+T+I+WLS+G +L R +E EI F+ + L + D W+ LA+L D+
Sbjct: 377 HTHLLYHTKIRWLSQGKILSRVYELRNEIHFFLIEKKSHLASIFEDDTWVTKLAYLTDIF 436
Query: 761 MHLNALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLKLVSRNESDGL 820
LN L++ LQG + V Q + I+ F L LW+ L N +++ + + E + +
Sbjct: 437 SILNELSLKLQGKNSDVFQHVERIQGFRKTLLLWQVRLKSNRPSYYMFPRFLQHIEENII 496
Query: 821 NYIPKIAELKTEFQKRLSDF----------KLYES--ELTLFSSPFS-------TKIDSV 861
N + E+K E L+ + +E+ E + PF+ +++ V
Sbjct: 497 NE-NILKEIKLEILLHLTSLSQTFNHFFPEEKFETLRENSWVKDPFAFRHPESIIELNLV 555
Query: 862 HEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQL 921
EE + E++ L + LK Y+ + + F+ + +P +L F +T +CE
Sbjct: 556 PEE-ENELLQLSSSYTLKNDYETLSLSAFWMKVKEDFPLLSRKSVLLLLPFTTTSLCELG 614
Query: 922 FSIMKLSKTK 931
FSI+ KTK
Sbjct: 615 FSILTQLKTK 624
>gi|28916698 transposon-derived Buster3 transposase-like [Homo
sapiens]
Length = 594
Score = 145 bits (366), Expect = 2e-34
Identities = 108/425 (25%), Positives = 206/425 (48%), Gaps = 20/425 (4%)
Query: 526 VEDLAGNLWEKLREKIR-SFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTV 584
+++++ ++ +++ E I+ S + I + E TD+++ +QL F+R + E ++ EE L
Sbjct: 150 IDEMSQDILQQVLEDIKASPLKVGIQLAETTDMDDCSQLMAFVRYIKER-EIVEEFLFCE 208
Query: 585 PMTGTKSGNEIFLRVEKSLKKFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCK 644
P+ + G ++F K I SV + G +M+ N+ V +K +
Sbjct: 209 PLQLSMKGIDVFNLFRDFFLKHKIALDVCGSVCTDGASSMLGENSEFVAYVKKEIP---- 264
Query: 645 GAELKSICCIIHPESLCAQKL--KMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQY 702
+ C+++P +L + L K+ + VV+ +N+I R NH F E+ +Y
Sbjct: 265 --HIVVTHCLLNPHALVIKTLPTKLRDALFTVVRVINFIKGRAPNHRLFQAFFEEIGIEY 322
Query: 703 GSLLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQ-LSSIDWIRDLAFLVDMTM 761
LL++TE++WLSRG +L FE EEI+ F+ + L + ++ LA+L D+
Sbjct: 323 SVLLFHTEMRWLSRGQILTHIFEMYEEINQFLHHKSSNLVDGFENKEFKIHLAYLADLFK 382
Query: 762 HLNALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLKLVSRNESDGLN 821
HLN L+ S+Q + + AF+ K W+ + + N +FP L+ + ++++G+
Sbjct: 383 HLNELSASMQRTGMNTVSAREKLSAFVRKFPFWQKRIEKRNFTNFPFLEEIIVSDNEGIF 442
Query: 822 YIPKIA----ELKTEFQKRLSDFKLYESELTLFSSPFSTKIDSVHEELQM--EVIDLQCN 875
+I +L F S L E+ + PF ID V + M ++ +L+ +
Sbjct: 443 IAAEITLHLQQLSNFFHGYFSIGDLNEASKWIL-DPFLFNIDFVDDSYLMKNDLAELRAS 501
Query: 876 TVLKTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIMKLSKTK--YC 933
+ +++ + + +F+ + ++P +IL F +TY+CE FS + KTK C
Sbjct: 502 GQILMEFETMKLEDFWCAQFTAFPNLAKTALEILMPFATTYLCELGFSSLLHFKTKSRSC 561
Query: 934 SQLKD 938
L D
Sbjct: 562 FNLSD 566
>gi|21495178 hypothetical protein LOC221786 [Homo sapiens]
Length = 573
Score = 137 bits (345), Expect = 5e-32
Identities = 112/434 (25%), Positives = 202/434 (46%), Gaps = 31/434 (7%)
Query: 529 LAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTG 588
+A +L L +++S + ++I +DE TDI + L +++R V ++ D E+LL + +
Sbjct: 122 IAKHLEAMLITRLQSGIDFAIQLDESTDIASCPTLLVYVRYVWQD-DFVEDLLCCLNLNS 180
Query: 589 TKSGNEIFLRVEKSLK-KFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAE 647
+G ++F +E L ++ +NW ++S GT M ++ L KL
Sbjct: 181 HITGLDLFTELENCLLGQYKLNWKHCKGISSDGTANMTGKHSRLTEKLLEATHNNAVWNH 240
Query: 648 LKSICCIIHPESLCAQKLKMDHVMDVV---VKSVNWICSRGLNHSEFTTLLYELDSQYGS 704
C IH E+L ++++ +MDV+ VK+VN+I LN E+ +
Sbjct: 241 -----CFIHREALVSKEISPS-LMDVLKNAVKTVNFIKGSSLNSRLLEIFCSEIGVNHTH 294
Query: 705 LLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQLSSID-WIRDLAFLVDMTMHL 763
LL++TE++WLS+G VL R +E EI F+ + L + D W+ LA+L D+ L
Sbjct: 295 LLFHTEVRWLSQGKVLSRVYELRNEIYIFLVEKQSHLANIFEDDIWVTKLAYLSDIFGIL 354
Query: 764 NALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLKLVSRNESDGLNYI 823
N L++ +QG + + Q + I F L LW+ L N +++ L+ E + +N
Sbjct: 355 NELSLKMQGKNNDIFQYLEHILGFQKTLLLWQARLKSNRPSYYMFPTLLQHIEENIINE- 413
Query: 824 PKIAELKTEFQKRLSDF------------------KLYESELTLFSSPFSTKIDSVHEEL 865
+ E+K E L+ ++ + F +P S ++ E
Sbjct: 414 DCLKEIKLEILLHLTSLSQTFNYYFPEEKFESLKENIWMKDPFAFQNPESIIELNLEPEE 473
Query: 866 QMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIM 925
+ E++ L + LK Y + + F+ + +P +L F +TY+CE FSI+
Sbjct: 474 ENELLQLSSSFTLKNYYKILSLSAFWIKIKDDFPLLSRKSILLLLPFTTTYLCELGFSIL 533
Query: 926 KLSKTKYCSQLKDS 939
KTK ++L +
Sbjct: 534 TRLKTKKRNRLNSA 547
>gi|239757552 PREDICTED: similar to hCG2006635, partial [Homo
sapiens]
Length = 304
Score = 118 bits (296), Expect = 2e-26
Identities = 56/72 (77%), Positives = 62/72 (86%)
Query: 108 RKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKW 167
+K VEDYFCFC KAL VPVPYEKML+DQSA++VQGLPEGVAF+HPENYDLATL+W
Sbjct: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
Query: 168 ILENKAGISFII 179
ILE AGISFII
Sbjct: 81 ILEYTAGISFII 92
Score = 40.8 bits (94), Expect = 0.006
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 333 REQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRR 392
++ V D F +A+ V VPY K+ + +++ G+P GV FK P +++++
Sbjct: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
Query: 393 ILEAAEFIKFTV 404
ILE I F +
Sbjct: 81 ILEYTAGISFII 92
>gi|239752592 PREDICTED: hypothetical protein XP_002348308, partial
[Homo sapiens]
Length = 94
Score = 118 bits (295), Expect = 3e-26
Identities = 56/74 (75%), Positives = 62/74 (83%)
Query: 108 RKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKW 167
+K VEDYFCFC K L VPVPYEKML+DQSA++VQGLPEGVAF+HPENYDLATL+W
Sbjct: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
Query: 168 ILENKAGISFIINR 181
ILE AGISFII R
Sbjct: 81 ILEYTAGISFIIKR 94
Score = 39.7 bits (91), Expect = 0.013
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 354 VKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIR 406
V VPY K+ + +++ G+P GV FK P +++++ ILE I F + R
Sbjct: 42 VPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEWILEYTAGISFIIKR 94
>gi|239754606 PREDICTED: similar to hCG1983816 [Homo sapiens]
Length = 298
Score = 87.8 bits (216), Expect = 4e-17
Identities = 48/134 (35%), Positives = 80/134 (59%), Gaps = 10/134 (7%)
Query: 317 DNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPG 376
+N RL I+ LREQV +LF++ +GEA+G+ +PV+VPY+ I NPG ++I+ +PPG
Sbjct: 95 ENYDARLLRIDIANTLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPG 154
Query: 377 VVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGL-------ELSNVGKRKI-DQEGRVF 428
++F+ P ++ RIL A I FTV RP GL + + +G+ + +Q +F
Sbjct: 155 ILFRKP--FGSQNLERILAMANKITFTVTRPFQGLIRKPDEDDTNRLGEVILQEQVKELF 212
Query: 429 QEKWERAYFFVEVQ 442
EK+ + + ++ Q
Sbjct: 213 NEKYSQCLWLLQQQ 226
Score = 49.7 bits (117), Expect = 1e-05
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 107 LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLK 166
LR+ V++ F YG+ALG V VPY+ + + +++++ LP G+ F+ P + L+
Sbjct: 110 LREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLE 167
Query: 167 WILENKAGISFIINRPFLG 185
IL I+F + RPF G
Sbjct: 168 RILAMANKITFTVTRPFQG 186
Score = 37.7 bits (86), Expect = 0.051
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 145 VQGLPEGVAFQHPENYDLATLKWILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIV 204
V GLPEG++ + P + +A L ILE I F+I RP L E G + D++
Sbjct: 8 VVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTE---GVKEPIVDSQ---- 60
Query: 205 SPSESCGPINVKTEPMEDSGISLKAEAVSVKKESEDPNY 243
+ S G P DS L E S+K++ NY
Sbjct: 61 GTASSLGFSPPALPPERDSRDPLVGE--SLKRQGFQENY 97
Score = 32.3 bits (72), Expect = 2.2
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 364 NPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRP 407
+P + + G+P G+ + P I+ + +ILEA+ I+F + RP
Sbjct: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRP 45
>gi|239749152 PREDICTED: similar to hCG1983816 [Homo sapiens]
Length = 265
Score = 87.8 bits (216), Expect = 4e-17
Identities = 48/134 (35%), Positives = 80/134 (59%), Gaps = 10/134 (7%)
Query: 317 DNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPG 376
+N RL I+ LREQV +LF++ +GEA+G+ +PV+VPY+ I NPG ++I+ +PPG
Sbjct: 95 ENYDARLLRIDIANTLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPG 154
Query: 377 VVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGL-------ELSNVGKRKI-DQEGRVF 428
++F+ P ++ RIL A I FTV RP GL + + +G+ + +Q +F
Sbjct: 155 ILFRKP--FGSQNLERILAMANKITFTVTRPFQGLIRKPDEDDTNRLGEVILQEQVKELF 212
Query: 429 QEKWERAYFFVEVQ 442
EK+ + + ++ Q
Sbjct: 213 NEKYSQCLWLLQQQ 226
Score = 49.7 bits (117), Expect = 1e-05
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 107 LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLK 166
LR+ V++ F YG+ALG V VPY+ + + +++++ LP G+ F+ P + L+
Sbjct: 110 LREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLE 167
Query: 167 WILENKAGISFIINRPFLG 185
IL I+F + RPF G
Sbjct: 168 RILAMANKITFTVTRPFQG 186
Score = 37.7 bits (86), Expect = 0.051
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 145 VQGLPEGVAFQHPENYDLATLKWILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIV 204
V GLPEG++ + P + +A L ILE I F+I RP L E G + D++
Sbjct: 8 VVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTE---GVKEPIVDSQ---- 60
Query: 205 SPSESCGPINVKTEPMEDSGISLKAEAVSVKKESEDPNY 243
+ S G P DS L E S+K++ NY
Sbjct: 61 GTASSLGFSPPALPPERDSRDPLVGE--SLKRQGFQENY 97
Score = 32.3 bits (72), Expect = 2.2
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 364 NPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRP 407
+P + + G+P G+ + P I+ + +ILEA+ I+F + RP
Sbjct: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRP 45
>gi|239508897 PREDICTED: similar to hCG1983816 [Homo sapiens]
Length = 265
Score = 87.8 bits (216), Expect = 4e-17
Identities = 48/134 (35%), Positives = 80/134 (59%), Gaps = 10/134 (7%)
Query: 317 DNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPG 376
+N RL I+ LREQV +LF++ +GEA+G+ +PV+VPY+ I NPG ++I+ +PPG
Sbjct: 95 ENYDARLLRIDIANTLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPG 154
Query: 377 VVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGL-------ELSNVGKRKI-DQEGRVF 428
++F+ P ++ RIL A I FTV RP GL + + +G+ + +Q +F
Sbjct: 155 ILFRKP--FGSQNLERILAMANKITFTVTRPFQGLIRKPDEDDTNRLGEVILQEQVKELF 212
Query: 429 QEKWERAYFFVEVQ 442
EK+ + + ++ Q
Sbjct: 213 NEKYSQCLWLLQQQ 226
Score = 49.7 bits (117), Expect = 1e-05
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 107 LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLK 166
LR+ V++ F YG+ALG V VPY+ + + +++++ LP G+ F+ P + L+
Sbjct: 110 LREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLE 167
Query: 167 WILENKAGISFIINRPFLG 185
IL I+F + RPF G
Sbjct: 168 RILAMANKITFTVTRPFQG 186
Score = 37.7 bits (86), Expect = 0.051
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 145 VQGLPEGVAFQHPENYDLATLKWILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIV 204
V GLPEG++ + P + +A L ILE I F+I RP L E G + D++
Sbjct: 8 VVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTE---GVKEPIVDSQ---- 60
Query: 205 SPSESCGPINVKTEPMEDSGISLKAEAVSVKKESEDPNY 243
+ S G P DS L E S+K++ NY
Sbjct: 61 GTASSLGFSPPALPPERDSRDPLVGE--SLKRQGFQENY 97
Score = 32.3 bits (72), Expect = 2.2
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 364 NPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRP 407
+P + + G+P G+ + P I+ + +ILEA+ I+F + RP
Sbjct: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRP 45
>gi|239741279 PREDICTED: similar to FLJ00310 protein [Homo
sapiens]
Length = 561
Score = 42.4 bits (98), Expect = 0.002
Identities = 27/41 (65%), Positives = 31/41 (75%), Gaps = 7/41 (17%)
Query: 1 MAQVAVSTLP------VEEESSSETRMVVTFLVSALESMCK 35
MAQVAVSTLP VE+E S E+RMVVTFL SAL+SM +
Sbjct: 1 MAQVAVSTLPIEDEESVEDEESLESRMVVTFL-SALDSMVR 40
>gi|116174778 centrosome spindle pole associated protein 1 isoform b
[Homo sapiens]
Length = 1221
Score = 34.7 bits (78), Expect = 0.43
Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 13/142 (9%)
Query: 230 EAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPS------EEPNEDP 283
EA KKE E+ +YN+Q H N + E M +P+VP+ + P
Sbjct: 810 EAERKKKEEEE----KYNLQLQHYCERDNLIGEETKHMRQPSPIVPALQNKIASKLQRPP 865
Query: 284 EAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRK 343
+ I + SS++ + + Q+ E+E+ + I ++ ++R+Q+ R
Sbjct: 866 SVDSIIRSFIHESSMSRAQSPPVPARKNQLRA---EEEKKNVIMELSEMRKQLRSEERRL 922
Query: 344 FGEAIGVDFPVKVPYRKITFNP 365
+ +D ++P RK NP
Sbjct: 923 QERLLHMDSDDEIPIRKKERNP 944
>gi|116174789 centrosome spindle pole associated protein 1 isoform a
[Homo sapiens]
Length = 1256
Score = 34.7 bits (78), Expect = 0.43
Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 13/142 (9%)
Query: 230 EAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPS------EEPNEDP 283
EA KKE E+ +YN+Q H N + E M +P+VP+ + P
Sbjct: 845 EAERKKKEEEE----KYNLQLQHYCERDNLIGEETKHMRQPSPIVPALQNKIASKLQRPP 900
Query: 284 EAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRK 343
+ I + SS++ + + Q+ E+E+ + I ++ ++R+Q+ R
Sbjct: 901 SVDSIIRSFIHESSMSRAQSPPVPARKNQLRA---EEEKKNVIMELSEMRKQLRSEERRL 957
Query: 344 FGEAIGVDFPVKVPYRKITFNP 365
+ +D ++P RK NP
Sbjct: 958 QERLLHMDSDDEIPIRKKERNP 979
>gi|19923268 protein-kinase, interferon-inducible double stranded
RNA dependent inhibitor, repressor of (P58 repressor)
[Homo sapiens]
Length = 761
Score = 34.3 bits (77), Expect = 0.57
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 535 EKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVP 585
E LRE +R +SI D++ DI L + +R VDE+ ++ EE + +P
Sbjct: 249 ETLRE-VRDSHFFSIITDDVVDIAGEEHLPVLVRFVDESHNLREEFIGFLP 298
>gi|31982906 cingulin-like 1 [Homo sapiens]
Length = 1302
Score = 33.9 bits (76), Expect = 0.74
Identities = 24/118 (20%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Query: 227 LKAEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAE 286
L+ + +S++++++D +++GS+ SS V++ME + + + SEE + A
Sbjct: 1115 LECDKISLERQNKDLKSRIIHLEGSYRSSKEGLVVQMEARIAELEDRLESEERD---RAN 1171
Query: 287 VKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEK-IKQLREQVNDLFSRK 343
+++ V V+D ++ D RL ++++ +++ E+++ L S K
Sbjct: 1172 LQLSNRRLERKVKELVMQVDDEHLSLTDQKDQLSLRLKAMKRQVEEAEEEIDRLESSK 1229
>gi|171543895 ataxin 2 [Homo sapiens]
Length = 1313
Score = 33.5 bits (75), Expect = 0.97
Identities = 28/144 (19%), Positives = 55/144 (38%), Gaps = 11/144 (7%)
Query: 206 PSESCGPINVKTEPMEDSGISLKAEAVSVKKESEDPNYYQYNMQGSHPSS---------- 255
PSE+ P +T P + S+ + + ++ P + N G+ PS
Sbjct: 655 PSEAATPPVARTSPSGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNTPSGPVLASPQAGI 714
Query: 256 TSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTV 315
E + M +P TP P+ P +E K + + A E++ + +
Sbjct: 715 IPTEAVAMPIPAASPTPASPASNRAVTPSSEAK-DSRLQDQRQNSPAGNKENIKPNETSP 773
Query: 316 PDNEKERLSSIEKIKQLREQVNDL 339
++ E + + R+Q++DL
Sbjct: 774 SFSKAENKGISPVVSEHRKQIDDL 797
>gi|155969693 myomesin family, member 3 [Homo sapiens]
Length = 1437
Score = 33.1 bits (74), Expect = 1.3
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 282 DPEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSS-------IEKIKQLRE 334
DP+ VKIE N S V G+EDL V V D +++ +S +EK+K+L
Sbjct: 941 DPQ-RVKIEDKVNKSKVILKEPGLEDLGTYSVIVTDADEDISASHTLTEEELEKLKKLSH 999
Query: 335 QVND 338
++ +
Sbjct: 1000 EIRN 1003
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 33.1 bits (74), Expect = 1.3
Identities = 27/108 (25%), Positives = 54/108 (50%), Gaps = 18/108 (16%)
Query: 254 SSTSNEVIEMELPMEDSTPLVPSEEPNEDP-----EAEVKIEGNTNSSSVTNSAAGVEDL 308
+S S + + +ED+ PLV ++ +AEV N++ SS+T++A+ ++ L
Sbjct: 163 ASLSMDEAAQQSVLEDTKPLVTNQHRRTASAGTVSDAEVHSISNSSHSSITSAASSMDSL 222
Query: 309 NIVQVTVPD-----------NEKERLSSI--EKIKQLREQVNDLFSRK 343
+I +VT P E+E+ + + EKI+ E++ + +K
Sbjct: 223 DIDKVTRPQELDLTHQGQPITEEEQAAKLKAEKIRVALEKIKEAQVKK 270
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,563,605
Number of Sequences: 37866
Number of extensions: 1626951
Number of successful extensions: 5167
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 4980
Number of HSP's gapped (non-prelim): 156
length of query: 949
length of database: 18,247,518
effective HSP length: 112
effective length of query: 837
effective length of database: 14,006,526
effective search space: 11723462262
effective search space used: 11723462262
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.