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Search of human proteins with 51173878
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|51173878 HpaII tiny fragments locus 9C [Homo sapiens]
(625 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|34222389 HpaII tiny fragments locus 9C [Homo sapiens] 1277 0.0
gi|51173878 HpaII tiny fragments locus 9C [Homo sapiens] 1277 0.0
gi|20149688 TRM2 tRNA methyltransferase 2 homolog B [Homo sapiens] 311 1e-84
gi|215272412 ataxin 2-binding protein 1 isoform 4 [Homo sapiens] 41 0.003
gi|215272410 ataxin 2-binding protein 1 isoform 5 [Homo sapiens] 41 0.003
gi|22538409 ataxin 2-binding protein 1 isoform 3 [Homo sapiens] 41 0.003
gi|22538407 ataxin 2-binding protein 1 isoform 2 [Homo sapiens] 41 0.003
gi|22538405 ataxin 2-binding protein 1 isoform 1 [Homo sapiens] 41 0.003
gi|22538403 ataxin 2-binding protein 1 isoform 4 [Homo sapiens] 41 0.003
gi|133925805 RNA binding motif protein 9 isoform 6 [Homo sapiens] 41 0.003
gi|133925803 RNA binding motif protein 9 isoform 5 [Homo sapiens] 41 0.003
gi|133925801 RNA binding motif protein 9 isoform 4 [Homo sapiens] 41 0.003
gi|133925799 RNA binding motif protein 9 isoform 3 [Homo sapiens] 41 0.003
gi|72534682 RNA binding motif protein 9 isoform 1 [Homo sapiens] 41 0.003
gi|7657504 RNA binding motif protein 9 isoform 2 [Homo sapiens] 41 0.003
gi|128485756 hexaribonucleotide binding protein 3 [Homo sapiens] 38 0.032
gi|92859575 methyltransferase like 5 [Homo sapiens] 35 0.27
gi|226823326 methenyltetrahydrofolate synthetase domain containi... 33 0.60
gi|226823324 methenyltetrahydrofolate synthetase domain containi... 33 0.60
gi|226823322 methenyltetrahydrofolate synthetase domain containi... 33 0.60
gi|226823319 methenyltetrahydrofolate synthetase domain containi... 33 0.60
gi|116875838 methenyltetrahydrofolate synthetase domain containi... 33 0.60
gi|62526045 zinc finger protein 638 [Homo sapiens] 33 0.60
gi|21626468 zinc finger protein 638 [Homo sapiens] 33 0.60
gi|7669528 neuregulin 2 isoform 2 [Homo sapiens] 33 0.79
gi|7669532 neuregulin 2 isoform 4 [Homo sapiens] 33 0.79
gi|7669530 neuregulin 2 isoform 3 [Homo sapiens] 33 0.79
gi|4758832 neuregulin 2 isoform 1 [Homo sapiens] 33 0.79
gi|225579097 bruno-like 5, RNA binding protein isoform 2 [Homo s... 33 1.0
gi|24762232 bruno-like 5, RNA binding protein isoform 1 [Homo sa... 33 1.0
>gi|34222389 HpaII tiny fragments locus 9C [Homo sapiens]
Length = 625
Score = 1277 bits (3305), Expect = 0.0
Identities = 625/625 (100%), Positives = 625/625 (100%)
Query: 1 MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY 60
MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY
Sbjct: 1 MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY 60
Query: 61 SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA 120
SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA
Sbjct: 61 SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA 120
Query: 121 ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY 180
ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY
Sbjct: 121 ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY 180
Query: 181 AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR 240
AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR
Sbjct: 181 AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR 240
Query: 241 NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP 300
NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP
Sbjct: 241 NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP 300
Query: 301 YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA 360
YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA
Sbjct: 301 YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA 360
Query: 361 SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL 420
SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL
Sbjct: 361 SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL 420
Query: 421 YTVIQDWAQLDAGSMVLDVCCGTGTIGLALARKVKRVIGVELCPEAVEDARVNAQDNELS 480
YTVIQDWAQLDAGSMVLDVCCGTGTIGLALARKVKRVIGVELCPEAVEDARVNAQDNELS
Sbjct: 421 YTVIQDWAQLDAGSMVLDVCCGTGTIGLALARKVKRVIGVELCPEAVEDARVNAQDNELS 480
Query: 481 NVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVILAIRRAKNLRRLLYVSCNP 540
NVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVILAIRRAKNLRRLLYVSCNP
Sbjct: 481 NVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVILAIRRAKNLRRLLYVSCNP 540
Query: 541 RAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEMLILFERVEHPNGTGVLGP 600
RAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEMLILFERVEHPNGTGVLGP
Sbjct: 541 RAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEMLILFERVEHPNGTGVLGP 600
Query: 601 HSPPAQPTPGPPDNTLQETGTFPSS 625
HSPPAQPTPGPPDNTLQETGTFPSS
Sbjct: 601 HSPPAQPTPGPPDNTLQETGTFPSS 625
>gi|51173878 HpaII tiny fragments locus 9C [Homo sapiens]
Length = 625
Score = 1277 bits (3305), Expect = 0.0
Identities = 625/625 (100%), Positives = 625/625 (100%)
Query: 1 MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY 60
MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY
Sbjct: 1 MSENLDNEGPKPMESCGQESSSALSCPTVSVPPAAPAALEEVEKEGAGAATGPGPQPGLY 60
Query: 61 SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA 120
SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA
Sbjct: 61 SYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCAFVTFRSAA 120
Query: 121 ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY 180
ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY
Sbjct: 121 ERDKALRVLHGALWKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPY 180
Query: 181 AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR 240
AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR
Sbjct: 181 AEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCPLEGVRPSPQQTEYR 240
Query: 241 NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP 300
NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP
Sbjct: 241 NKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATKQVVKAFQEFIRSTP 300
Query: 301 YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA 360
YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA
Sbjct: 301 YSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELKTSLAQHFTAGPGRA 360
Query: 361 SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL 420
SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL
Sbjct: 361 SGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISPHAFFQVNTPAAEVL 420
Query: 421 YTVIQDWAQLDAGSMVLDVCCGTGTIGLALARKVKRVIGVELCPEAVEDARVNAQDNELS 480
YTVIQDWAQLDAGSMVLDVCCGTGTIGLALARKVKRVIGVELCPEAVEDARVNAQDNELS
Sbjct: 421 YTVIQDWAQLDAGSMVLDVCCGTGTIGLALARKVKRVIGVELCPEAVEDARVNAQDNELS 480
Query: 481 NVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVILAIRRAKNLRRLLYVSCNP 540
NVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVILAIRRAKNLRRLLYVSCNP
Sbjct: 481 NVEFHCGRAEDLVPTLVSRLASQHLVAILDPPRAGLHSKVILAIRRAKNLRRLLYVSCNP 540
Query: 541 RAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEMLILFERVEHPNGTGVLGP 600
RAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEMLILFERVEHPNGTGVLGP
Sbjct: 541 RAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVDLFPQTPHCEMLILFERVEHPNGTGVLGP 600
Query: 601 HSPPAQPTPGPPDNTLQETGTFPSS 625
HSPPAQPTPGPPDNTLQETGTFPSS
Sbjct: 601 HSPPAQPTPGPPDNTLQETGTFPSS 625
>gi|20149688 TRM2 tRNA methyltransferase 2 homolog B [Homo sapiens]
Length = 504
Score = 311 bits (796), Expect = 1e-84
Identities = 178/426 (41%), Positives = 252/426 (59%), Gaps = 8/426 (1%)
Query: 167 RVADVVTPLWTVPYAEQLERKQLECEQVLQKLAKEIGSTNRALLPWLLEQRHKHNKACCP 226
R+ADVVTPLW + Y EQL+ K +++LQ+L I N + + K + C
Sbjct: 83 RLADVVTPLWRLSYEEQLKVKFAAQKKILQRLESYIQMLNGVSVTTAVP---KSERLSCL 139
Query: 227 LEGVRPSPQQTEYRNKCEFLVGVGVDGEDNTVGCRLGKYKGGTCAVAAPFDTVHIPEATK 286
L + PSP YRNK F V G DG TVG LG ++ G +IPE
Sbjct: 140 LHPIIPSPVINGYRNKSTFSVNRGPDGNPKTVGFYLGTWRDGNVVCVQSNHLKNIPEKHS 199
Query: 287 QVVKAFQEFIRSTPYSAYDPETYTGHWKQLTVRTSRRHQAMAIAYFHPQKLSPEELAELK 346
QV + ++ F+R +P G+W++LTVRT+ + MAI FHPQKLS EEL K
Sbjct: 200 QVAQYYEVFLRQSPLEPCLVFHEGGYWRELTVRTNSQGHTMAIITFHPQKLSQEELHVQK 259
Query: 347 TSLAQHFTAGPGRASGVTCLYFVEEGQRKTPSQEGLPLEHVAGDRCIHEDLLGLTFRISP 406
+ + F GPG A G+T LYF E + Q+ P + + G+ I E+LL L RISP
Sbjct: 260 EIVKEFFIRGPGAACGLTSLYFQESTMTRCSHQQS-PYQLLFGEPYIFEELLSLKIRISP 318
Query: 407 HAFFQVNTPAAEVLYTVIQDWAQLDAGSMVLDVCCGTGTIGLALARKVKRVIGVELCPEA 466
AFFQ+NT AE+LY + + +++ +++LD+CCGTG IGL+LA+ RV+G+EL +A
Sbjct: 319 DAFFQINTAGAEMLYRTVGELTGVNSDTILLDICCGTGVIGLSLAQHTSRVLGIELLEQA 378
Query: 467 VEDARVNAQDNELSNVEFHCGRAEDLVPTLV-SRLASQHLVAILDPPRAGLHSKVILAIR 525
VEDAR A N ++N EFH G+AE ++P L+ S+ Q +VA+++P RAGLH KVI AIR
Sbjct: 379 VEDARWTAAFNGITNSEFHTGQAEKILPGLLKSKEDGQSIVAVVNPARAGLHYKVIQAIR 438
Query: 526 RAKNLRRLLYVSCNPRA-AMGNFVDLC--RAPSNRVKGIPFRPVKAVAVDLFPQTPHCEM 582
+ + L++VSC + N ++LC P+ ++ G PF +AV VDLFP TPHCE+
Sbjct: 439 NFRAIHTLVFVSCKLHGESTRNVIELCCPPDPAKKLLGEPFVLQQAVPVDLFPHTPHCEL 498
Query: 583 LILFER 588
++LF R
Sbjct: 499 VLLFTR 504
>gi|215272412 ataxin 2-binding protein 1 isoform 4 [Homo sapiens]
Length = 397
Score = 41.2 bits (95), Expect = 0.003
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 74 KLELQNVPRHASFSDVRRFLGRFGLQPHKTKLF---GQPPCAFVTFRSAAERDKALRVLH 130
+L + N+P D+R+ G+FG +F G FVTF ++A+ D+A LH
Sbjct: 118 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLH 177
Query: 131 GALWKGRPLSVRLA 144
G + +GR + V A
Sbjct: 178 GTVVEGRKIEVNNA 191
>gi|215272410 ataxin 2-binding protein 1 isoform 5 [Homo sapiens]
Length = 370
Score = 41.2 bits (95), Expect = 0.003
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 74 KLELQNVPRHASFSDVRRFLGRFGLQPHKTKLF---GQPPCAFVTFRSAAERDKALRVLH 130
+L + N+P D+R+ G+FG +F G FVTF ++A+ D+A LH
Sbjct: 118 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLH 177
Query: 131 GALWKGRPLSVRLA 144
G + +GR + V A
Sbjct: 178 GTVVEGRKIEVNNA 191
>gi|22538409 ataxin 2-binding protein 1 isoform 3 [Homo sapiens]
Length = 395
Score = 41.2 bits (95), Expect = 0.003
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 74 KLELQNVPRHASFSDVRRFLGRFGLQPHKTKLF---GQPPCAFVTFRSAAERDKALRVLH 130
+L + N+P D+R+ G+FG +F G FVTF ++A+ D+A LH
Sbjct: 138 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLH 197
Query: 131 GALWKGRPLSVRLA 144
G + +GR + V A
Sbjct: 198 GTVVEGRKIEVNNA 211
>gi|22538407 ataxin 2-binding protein 1 isoform 2 [Homo sapiens]
Length = 392
Score = 41.2 bits (95), Expect = 0.003
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 74 KLELQNVPRHASFSDVRRFLGRFGLQPHKTKLF---GQPPCAFVTFRSAAERDKALRVLH 130
+L + N+P D+R+ G+FG +F G FVTF ++A+ D+A LH
Sbjct: 138 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLH 197
Query: 131 GALWKGRPLSVRLA 144
G + +GR + V A
Sbjct: 198 GTVVEGRKIEVNNA 211
>gi|22538405 ataxin 2-binding protein 1 isoform 1 [Homo sapiens]
Length = 418
Score = 41.2 bits (95), Expect = 0.003
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 74 KLELQNVPRHASFSDVRRFLGRFGLQPHKTKLF---GQPPCAFVTFRSAAERDKALRVLH 130
+L + N+P D+R+ G+FG +F G FVTF ++A+ D+A LH
Sbjct: 138 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLH 197
Query: 131 GALWKGRPLSVRLA 144
G + +GR + V A
Sbjct: 198 GTVVEGRKIEVNNA 211
>gi|22538403 ataxin 2-binding protein 1 isoform 4 [Homo sapiens]
Length = 397
Score = 41.2 bits (95), Expect = 0.003
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 74 KLELQNVPRHASFSDVRRFLGRFGLQPHKTKLF---GQPPCAFVTFRSAAERDKALRVLH 130
+L + N+P D+R+ G+FG +F G FVTF ++A+ D+A LH
Sbjct: 118 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLH 177
Query: 131 GALWKGRPLSVRLA 144
G + +GR + V A
Sbjct: 178 GTVVEGRKIEVNNA 191
>gi|133925805 RNA binding motif protein 9 isoform 6 [Homo sapiens]
Length = 450
Score = 41.2 bits (95), Expect = 0.003
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 74 KLELQNVPRHASFSDVRRFLGRFGLQPHKTKLF---GQPPCAFVTFRSAAERDKALRVLH 130
+L + N+P D+R+ G+FG +F G FVTF ++A+ D+A LH
Sbjct: 182 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLH 241
Query: 131 GALWKGRPLSVRLA 144
G + +GR + V A
Sbjct: 242 GTVVEGRKIEVNNA 255
>gi|133925803 RNA binding motif protein 9 isoform 5 [Homo sapiens]
Length = 451
Score = 41.2 bits (95), Expect = 0.003
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 74 KLELQNVPRHASFSDVRRFLGRFGLQPHKTKLF---GQPPCAFVTFRSAAERDKALRVLH 130
+L + N+P D+R+ G+FG +F G FVTF ++A+ D+A LH
Sbjct: 183 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLH 242
Query: 131 GALWKGRPLSVRLA 144
G + +GR + V A
Sbjct: 243 GTVVEGRKIEVNNA 256
>gi|133925801 RNA binding motif protein 9 isoform 4 [Homo sapiens]
Length = 370
Score = 41.2 bits (95), Expect = 0.003
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 74 KLELQNVPRHASFSDVRRFLGRFGLQPHKTKLF---GQPPCAFVTFRSAAERDKALRVLH 130
+L + N+P D+R+ G+FG +F G FVTF ++A+ D+A LH
Sbjct: 112 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLH 171
Query: 131 GALWKGRPLSVRLA 144
G + +GR + V A
Sbjct: 172 GTVVEGRKIEVNNA 185
>gi|133925799 RNA binding motif protein 9 isoform 3 [Homo sapiens]
Length = 376
Score = 41.2 bits (95), Expect = 0.003
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 74 KLELQNVPRHASFSDVRRFLGRFGLQPHKTKLF---GQPPCAFVTFRSAAERDKALRVLH 130
+L + N+P D+R+ G+FG +F G FVTF ++A+ D+A LH
Sbjct: 112 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLH 171
Query: 131 GALWKGRPLSVRLA 144
G + +GR + V A
Sbjct: 172 GTVVEGRKIEVNNA 185
>gi|72534682 RNA binding motif protein 9 isoform 1 [Homo sapiens]
Length = 380
Score = 41.2 bits (95), Expect = 0.003
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 74 KLELQNVPRHASFSDVRRFLGRFGLQPHKTKLF---GQPPCAFVTFRSAAERDKALRVLH 130
+L + N+P D+R+ G+FG +F G FVTF ++A+ D+A LH
Sbjct: 112 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLH 171
Query: 131 GALWKGRPLSVRLA 144
G + +GR + V A
Sbjct: 172 GTVVEGRKIEVNNA 185
>gi|7657504 RNA binding motif protein 9 isoform 2 [Homo sapiens]
Length = 367
Score = 41.2 bits (95), Expect = 0.003
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 74 KLELQNVPRHASFSDVRRFLGRFGLQPHKTKLF---GQPPCAFVTFRSAAERDKALRVLH 130
+L + N+P D+R+ G+FG +F G FVTF ++A+ D+A LH
Sbjct: 113 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLH 172
Query: 131 GALWKGRPLSVRLA 144
G + +GR + V A
Sbjct: 173 GTVVEGRKIEVNNA 186
>gi|128485756 hexaribonucleotide binding protein 3 [Homo sapiens]
Length = 312
Score = 37.7 bits (86), Expect = 0.032
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 74 KLELQNVPRHASFSDVRRFLGRFGLQPHKTKLF---GQPPCAFVTFRSAAERDKALRVLH 130
+L + N+P D+R+ G+FG +F G FVTF ++++ D+A L+
Sbjct: 100 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFETSSDADRAREKLN 159
Query: 131 GALWKGRPLSVRLA 144
G + +GR + V A
Sbjct: 160 GTIVEGRKIEVNNA 173
>gi|92859575 methyltransferase like 5 [Homo sapiens]
Length = 209
Score = 34.7 bits (78), Expect = 0.27
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 416 AAEVLYTVIQDWAQLDAGSMVLDVCCGTGTIGLALARKVKRV-IGVELCPEAVEDARVNA 474
AA +LYT+ + ++ +V D+ CG G + + A + +G ++ +A+E NA
Sbjct: 36 AACMLYTIHNTYDDIE-NKVVADLGCGCGVLSIGTAMLGAGLCVGFDIDEDALEIFNRNA 94
Query: 475 QDNELSNVEFHCGRAEDLVPTLVSRLASQHLVAILDPP 512
++ EL+N++ + V L +R++ I++PP
Sbjct: 95 EEFELTNIDM----VQCDVCLLSNRMSKSFDTVIMNPP 128
>gi|226823326 methenyltetrahydrofolate synthetase domain containing
isoform 5 [Homo sapiens]
Length = 363
Score = 33.5 bits (75), Expect = 0.60
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 8/97 (8%)
Query: 53 PGPQPGLYSYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCA 112
PG PG + + D++ N+P A SD++R L G P + G A
Sbjct: 274 PGSPPGEGAPLAADVYVG--------NLPGDARVSDLKRALRELGSVPLRLTWQGPRRRA 325
Query: 113 FVTFRSAAERDKALRVLHGALWKGRPLSVRLARPKAD 149
F+ + +A +A+ L G L V LAR + D
Sbjct: 326 FLHYPDSAAAQQAVSCLQGLRLGTDTLRVALARQQRD 362
>gi|226823324 methenyltetrahydrofolate synthetase domain containing
isoform 4 [Homo sapiens]
Length = 382
Score = 33.5 bits (75), Expect = 0.60
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 8/97 (8%)
Query: 53 PGPQPGLYSYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCA 112
PG PG + + D++ N+P A SD++R L G P + G A
Sbjct: 293 PGSPPGEGAPLAADVYVG--------NLPGDARVSDLKRALRELGSVPLRLTWQGPRRRA 344
Query: 113 FVTFRSAAERDKALRVLHGALWKGRPLSVRLARPKAD 149
F+ + +A +A+ L G L V LAR + D
Sbjct: 345 FLHYPDSAAAQQAVSCLQGLRLGTDTLRVALARQQRD 381
>gi|226823322 methenyltetrahydrofolate synthetase domain containing
isoform 2 [Homo sapiens]
Length = 383
Score = 33.5 bits (75), Expect = 0.60
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 8/97 (8%)
Query: 53 PGPQPGLYSYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCA 112
PG PG + + D++ N+P A SD++R L G P + G A
Sbjct: 294 PGSPPGEGAPLAADVYVG--------NLPGDARVSDLKRALRELGSVPLRLTWQGPRRRA 345
Query: 113 FVTFRSAAERDKALRVLHGALWKGRPLSVRLARPKAD 149
F+ + +A +A+ L G L V LAR + D
Sbjct: 346 FLHYPDSAAAQQAVSCLQGLRLGTDTLRVALARQQRD 382
>gi|226823319 methenyltetrahydrofolate synthetase domain containing
isoform 1 [Homo sapiens]
Length = 383
Score = 33.5 bits (75), Expect = 0.60
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 8/97 (8%)
Query: 53 PGPQPGLYSYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCA 112
PG PG + + D++ N+P A SD++R L G P + G A
Sbjct: 294 PGSPPGEGAPLAADVYVG--------NLPGDARVSDLKRALRELGSVPLRLTWQGPRRRA 345
Query: 113 FVTFRSAAERDKALRVLHGALWKGRPLSVRLARPKAD 149
F+ + +A +A+ L G L V LAR + D
Sbjct: 346 FLHYPDSAAAQQAVSCLQGLRLGTDTLRVALARQQRD 382
>gi|116875838 methenyltetrahydrofolate synthetase domain containing
isoform 3 [Homo sapiens]
Length = 382
Score = 33.5 bits (75), Expect = 0.60
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 8/97 (8%)
Query: 53 PGPQPGLYSYIRDDLFTSEIFKLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFGQPPCA 112
PG PG + + D++ N+P A SD++R L G P + G A
Sbjct: 293 PGSPPGEGAPLAADVYVG--------NLPGDARVSDLKRALRELGSVPLRLTWQGPRRRA 344
Query: 113 FVTFRSAAERDKALRVLHGALWKGRPLSVRLARPKAD 149
F+ + +A +A+ L G L V LAR + D
Sbjct: 345 FLHYPDSAAAQQAVSCLQGLRLGTDTLRVALARQQRD 381
>gi|62526045 zinc finger protein 638 [Homo sapiens]
Length = 1978
Score = 33.5 bits (75), Expect = 0.60
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 22/140 (15%)
Query: 465 EAVEDARVNAQDNELSNVEFHCGRAEDLVPTLVSRLASQHL----VAILDPPRAGL---- 516
EA+ DA + A +NE N E E++ LVS L ++ V L P GL
Sbjct: 882 EAISDAALEATENEPLNKE-----TEEMCVMLVSNLPNKGYSVEEVYDLAKPFGGLKDIL 936
Query: 517 ----HSKVILAIRRAKNLRRLLYVSCNPRAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVD 572
H K + I R + + +C P GN + + AP N + + +A+ +
Sbjct: 937 ILSSHKKAYIEINRKAAESMVKFYTCFPVLMDGNQLSISMAPEN----MNIKDEEAIFIT 992
Query: 573 LFPQT-PHCEMLILFERVEH 591
L + P + +++R H
Sbjct: 993 LVKENDPEANIDTIYDRFVH 1012
>gi|21626468 zinc finger protein 638 [Homo sapiens]
Length = 1978
Score = 33.5 bits (75), Expect = 0.60
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 22/140 (15%)
Query: 465 EAVEDARVNAQDNELSNVEFHCGRAEDLVPTLVSRLASQHL----VAILDPPRAGL---- 516
EA+ DA + A +NE N E E++ LVS L ++ V L P GL
Sbjct: 882 EAISDAALEATENEPLNKE-----TEEMCVMLVSNLPNKGYSVEEVYDLAKPFGGLKDIL 936
Query: 517 ----HSKVILAIRRAKNLRRLLYVSCNPRAAMGNFVDLCRAPSNRVKGIPFRPVKAVAVD 572
H K + I R + + +C P GN + + AP N + + +A+ +
Sbjct: 937 ILSSHKKAYIEINRKAAESMVKFYTCFPVLMDGNQLSISMAPEN----MNIKDEEAIFIT 992
Query: 573 LFPQT-PHCEMLILFERVEH 591
L + P + +++R H
Sbjct: 993 LVKENDPEANIDTIYDRFVH 1012
>gi|7669528 neuregulin 2 isoform 2 [Homo sapiens]
Length = 844
Score = 33.1 bits (74), Expect = 0.79
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 9/49 (18%)
Query: 19 ESSSALSCPTVSVPPAAPAALEEVEKE---------GAGAATGPGPQPG 58
E +S S VS+PPAAP + E++ G G GPGP PG
Sbjct: 613 EITSPNSAHAVSLPPAAPISYRLAEQQPLLRHPAPPGPGPGPGPGPGPG 661
>gi|7669532 neuregulin 2 isoform 4 [Homo sapiens]
Length = 852
Score = 33.1 bits (74), Expect = 0.79
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 9/49 (18%)
Query: 19 ESSSALSCPTVSVPPAAPAALEEVEKE---------GAGAATGPGPQPG 58
E +S S VS+PPAAP + E++ G G GPGP PG
Sbjct: 621 EITSPNSAHAVSLPPAAPISYRLAEQQPLLRHPAPPGPGPGPGPGPGPG 669
>gi|7669530 neuregulin 2 isoform 3 [Homo sapiens]
Length = 858
Score = 33.1 bits (74), Expect = 0.79
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 9/49 (18%)
Query: 19 ESSSALSCPTVSVPPAAPAALEEVEKE---------GAGAATGPGPQPG 58
E +S S VS+PPAAP + E++ G G GPGP PG
Sbjct: 627 EITSPNSAHAVSLPPAAPISYRLAEQQPLLRHPAPPGPGPGPGPGPGPG 675
>gi|4758832 neuregulin 2 isoform 1 [Homo sapiens]
Length = 850
Score = 33.1 bits (74), Expect = 0.79
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 9/49 (18%)
Query: 19 ESSSALSCPTVSVPPAAPAALEEVEKE---------GAGAATGPGPQPG 58
E +S S VS+PPAAP + E++ G G GPGP PG
Sbjct: 619 EITSPNSAHAVSLPPAAPISYRLAEQQPLLRHPAPPGPGPGPGPGPGPG 667
>gi|225579097 bruno-like 5, RNA binding protein isoform 2 [Homo
sapiens]
Length = 320
Score = 32.7 bits (73), Expect = 1.0
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 14/115 (12%)
Query: 74 KLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFG----QPPCAFVTFRSAAERDKALRVL 129
KL + + + S DV R FG+ T L G CAFV F S E A+ L
Sbjct: 21 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHAL 80
Query: 130 HGAL---WKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPYA 181
HG+ L V+ A + RR +Q + ++TP T+P++
Sbjct: 81 HGSQTMPGASSSLVVKFADTDKERTLRRMQQ-------MVGQLGILTPSLTLPFS 128
>gi|24762232 bruno-like 5, RNA binding protein isoform 1 [Homo
sapiens]
Length = 485
Score = 32.7 bits (73), Expect = 1.0
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 14/115 (12%)
Query: 74 KLELQNVPRHASFSDVRRFLGRFGLQPHKTKLFG----QPPCAFVTFRSAAERDKALRVL 129
KL + + + S DV R FG+ T L G CAFV F S E A+ L
Sbjct: 135 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHAL 194
Query: 130 HGAL---WKGRPLSVRLARPKADPMARRRRQEGESEPPVTRVADVVTPLWTVPYA 181
HG+ L V+ A + RR +Q + ++TP T+P++
Sbjct: 195 HGSQTMPGASSSLVVKFADTDKERTLRRMQQ-------MVGQLGILTPSLTLPFS 242
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,822,532
Number of Sequences: 37866
Number of extensions: 1370464
Number of successful extensions: 6944
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 6832
Number of HSP's gapped (non-prelim): 133
length of query: 625
length of database: 18,247,518
effective HSP length: 108
effective length of query: 517
effective length of database: 14,157,990
effective search space: 7319680830
effective search space used: 7319680830
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.