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Search of human proteins with 51173724
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|51173724 bystin [Homo sapiens]
(437 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|51173724 bystin [Homo sapiens] 868 0.0
gi|7657326 male-enhanced antigen [Homo sapiens] 39 0.012
gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [H... 34 0.23
gi|11560152 zinc finger protein 335 [Homo sapiens] 34 0.23
gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Hom... 34 0.23
gi|56090620 NFKB activating protein-like [Homo sapiens] 33 0.39
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] 33 0.51
gi|224589132 hypothetical protein LOC100132406 [Homo sapiens] 33 0.67
gi|239741309 PREDICTED: hypothetical protein XP_002344485 [Homo ... 32 0.87
gi|169162915 PREDICTED: hypothetical protein LOC728841 [Homo sap... 32 0.87
gi|50658065 SMC4 structural maintenance of chromosomes 4-like 1 ... 32 1.1
gi|50658063 SMC4 structural maintenance of chromosomes 4-like 1 ... 32 1.1
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 32 1.5
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 32 1.5
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 32 1.5
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 31 1.9
gi|7657017 hypothetical protein LOC25832 [Homo sapiens] 31 2.5
gi|229577000 ecotropic viral integration site 5-like isoform 1 [... 30 3.3
gi|4505835 polycystin 2 [Homo sapiens] 30 3.3
gi|20149594 heat shock 90kDa protein 1, beta [Homo sapiens] 30 3.3
gi|4504487 histidine rich calcium binding protein precursor [Hom... 30 3.3
gi|13569843 nucleolar protein 7, 27kDa [Homo sapiens] 30 3.3
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 30 3.3
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 30 3.3
gi|71274178 developing brain homeobox 1 [Homo sapiens] 30 3.3
gi|38788333 remodeling and spacing factor 1 [Homo sapiens] 30 4.3
gi|110349786 Alstrom syndrome 1 [Homo sapiens] 30 4.3
gi|239758011 PREDICTED: hypothetical protein LOC728841, partial ... 30 4.3
gi|4502131 amyloid beta A4 precursor protein-binding, family B, ... 30 4.3
gi|22035554 amyloid beta A4 precursor protein-binding, family B,... 30 4.3
>gi|51173724 bystin [Homo sapiens]
Length = 437
Score = 868 bits (2242), Expect = 0.0
Identities = 437/437 (100%), Positives = 437/437 (100%)
Query: 1 MPKFKAARGVGGQEKHAPLADQILAGNAVRAGVREKRRGRGTGEAEEEYVGPRLSRRILQ 60
MPKFKAARGVGGQEKHAPLADQILAGNAVRAGVREKRRGRGTGEAEEEYVGPRLSRRILQ
Sbjct: 1 MPKFKAARGVGGQEKHAPLADQILAGNAVRAGVREKRRGRGTGEAEEEYVGPRLSRRILQ 60
Query: 61 QARQQQEELEAEHGTGDKPAAPRERTTRLGPRMPQDGSDDEDEEWPTLEKAATMTAAGHH 120
QARQQQEELEAEHGTGDKPAAPRERTTRLGPRMPQDGSDDEDEEWPTLEKAATMTAAGHH
Sbjct: 61 QARQQQEELEAEHGTGDKPAAPRERTTRLGPRMPQDGSDDEDEEWPTLEKAATMTAAGHH 120
Query: 121 AEVVVDPEDERAIEMFMNKNPPARRTLADIIMEKLTEKQTEVETVMSEVSGFPMPQLDPR 180
AEVVVDPEDERAIEMFMNKNPPARRTLADIIMEKLTEKQTEVETVMSEVSGFPMPQLDPR
Sbjct: 121 AEVVVDPEDERAIEMFMNKNPPARRTLADIIMEKLTEKQTEVETVMSEVSGFPMPQLDPR 180
Query: 181 VLEVYRGVREVLSKYRSGKLPKAFKIIPALSNWEQILYVTEPEAWTAAAMYQATRIFASN 240
VLEVYRGVREVLSKYRSGKLPKAFKIIPALSNWEQILYVTEPEAWTAAAMYQATRIFASN
Sbjct: 181 VLEVYRGVREVLSKYRSGKLPKAFKIIPALSNWEQILYVTEPEAWTAAAMYQATRIFASN 240
Query: 241 LKERMAQRFYNLVLLPRVRDDVAEYKRLNFHLYMALKKALFKPGAWFKGILIPLCESGTC 300
LKERMAQRFYNLVLLPRVRDDVAEYKRLNFHLYMALKKALFKPGAWFKGILIPLCESGTC
Sbjct: 241 LKERMAQRFYNLVLLPRVRDDVAEYKRLNFHLYMALKKALFKPGAWFKGILIPLCESGTC 300
Query: 301 TLREAIIVGSIITKCSIPVLHSSAAMLKIAEMEYSGANSIFLRLLLDKKYALPYRVLDAL 360
TLREAIIVGSIITKCSIPVLHSSAAMLKIAEMEYSGANSIFLRLLLDKKYALPYRVLDAL
Sbjct: 301 TLREAIIVGSIITKCSIPVLHSSAAMLKIAEMEYSGANSIFLRLLLDKKYALPYRVLDAL 360
Query: 361 VFHFLGFRTEKRELPVLWHQCLLTLVQRYKADLATDQKEALLELLRLQPHPQLSPEIRRE 420
VFHFLGFRTEKRELPVLWHQCLLTLVQRYKADLATDQKEALLELLRLQPHPQLSPEIRRE
Sbjct: 361 VFHFLGFRTEKRELPVLWHQCLLTLVQRYKADLATDQKEALLELLRLQPHPQLSPEIRRE 420
Query: 421 LQSAVPRDVEDVPITVE 437
LQSAVPRDVEDVPITVE
Sbjct: 421 LQSAVPRDVEDVPITVE 437
>gi|7657326 male-enhanced antigen [Homo sapiens]
Length = 185
Score = 38.5 bits (88), Expect = 0.012
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 44 EAEEEYVGPR-LSRRILQQARQQQEELEAEHGTGDKPAAPRERTTRLGPRMPQDGSDDED 102
E EE GP S + L Q +Q+E A G GD A ++R LG +P + ED
Sbjct: 57 EQEETGSGPAGYSYQPLNQDPEQEEVELAPVGDGDVVADIQDRIQALGLHLPDPPLESED 116
Query: 103 EEWPTLEKAATMTAAGHHAEVVVDPEDERAIEMFM 137
E+ E+ A TA +H+ + +DPE ++ M
Sbjct: 117 ED----EEGA--TALNNHSSIPMDPEHVELVKRTM 145
>gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [Homo
sapiens]
Length = 1251
Score = 34.3 bits (77), Expect = 0.23
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 15/110 (13%)
Query: 41 GTGEAEEEYVGP------RLSRRILQQARQQQEELEAEHGTGDKPAAPRERTTRLGPRMP 94
G G++EE+ P +L + ++A+++ EE E E + P
Sbjct: 386 GVGQSEEDGTRPQSTSDQKLWEEVGEEAKKEAEEKAKEEA--------EEVAEEEAEKEP 437
Query: 95 QDGSDDEDEEWPTLEKAAT-MTAAGHHAEVVVDPEDERAIEMFMNKNPPA 143
QD ++ ++E E A++ + A H EV V+ D + + +NPP+
Sbjct: 438 QDWAETKEEPEAEAEAASSGVPATKQHPEVQVEDTDADSCPLMAEENPPS 487
>gi|11560152 zinc finger protein 335 [Homo sapiens]
Length = 1342
Score = 34.3 bits (77), Expect = 0.23
Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 15/138 (10%)
Query: 55 SRRILQQARQQQEELEAEHGT--GDKPAAPRERTTRLGPRMPQDGSDDEDEEWPTLEKAA 112
SRR + QQ EEL+ +H G P++P P +P + + + E P+L +
Sbjct: 718 SRRRPFFSLQQIEELKQQHSAAPGPPPSSPGP------PEIPPEATTFQSSEAPSLLCSD 771
Query: 113 TMTAAG----HHAEVVVDPEDERAIEMFMNKNPPARRTLADIIMEKLTEKQTEVETVMSE 168
T+ A AE + A+++ +N + A+R L ++ K +VE ++
Sbjct: 772 TLGGATIIYQQGAEESTAMATQTALDLLLNMS--AQRELGGTALQVAVVKSEDVEAGLAS 829
Query: 169 VSGFPMPQ-LDPRVLEVY 185
G P P+ P+V+ ++
Sbjct: 830 PGGQPSPEGATPQVVTLH 847
>gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Homo
sapiens]
Length = 1551
Score = 34.3 bits (77), Expect = 0.23
Identities = 40/157 (25%), Positives = 66/157 (42%), Gaps = 14/157 (8%)
Query: 99 DDEDEEWPTLEKAAT------MTAAGHHAEVVVDPEDERAIEMFMNKNPPARRTLADIIM 152
+ E W LE+ + + H E + P D R +E + R L +++
Sbjct: 406 ESSSEAWAALERKLQCLEQEKVELSRKHQEALHAPTDHRELEQLRKEVQTLRDRLPEMLR 465
Query: 153 EKLTEKQTEVETVMSEVSGFPMPQLDPRVLEVYRGVREVLSKYRSGKLPKAFKIIPALSN 212
+K + QT+ +G P D R E+ R RE L++ R+G + ++ A
Sbjct: 466 DKASLSQTD-----GPPAGSPGQDSDLR-QELDRLHRE-LAEGRAGLQAQEQELCRAQGQ 518
Query: 213 WEQILYVTEPEAWTAAAMYQATRIFASNLKE-RMAQR 248
E++L + AA TR +S L+E R AQR
Sbjct: 519 QEELLQRLQEAQEREAATASQTRALSSQLEEARAAQR 555
>gi|56090620 NFKB activating protein-like [Homo sapiens]
Length = 402
Score = 33.5 bits (75), Expect = 0.39
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 12/77 (15%)
Query: 49 YVGPRLSRRILQQARQQQEELEAEHGTGDKPAAPRERTTRLG--------PRMPQDGSDD 100
Y G R R + RQ E+ E E + RER LG P+ PQ SD+
Sbjct: 91 YSGYRYHRHCYAEERQSAEDYEKEESHRQRRLKERERIGELGAPEVWGPSPKFPQLDSDE 150
Query: 101 ----EDEEWPTLEKAAT 113
EDEE T +K+++
Sbjct: 151 HTPVEDEEEVTHQKSSS 167
>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
Length = 2240
Score = 33.1 bits (74), Expect = 0.51
Identities = 37/134 (27%), Positives = 52/134 (38%), Gaps = 12/134 (8%)
Query: 45 AEEEYVGPRLSRRILQQARQQQEELEAEHGTGDKPAAPRERTTRLGPRMPQDGSDDEDEE 104
AE+ P L I+QQ Q ++ E D+P P E P D E
Sbjct: 1350 AEDGVPAPPLLDPIVQQFGQFSKDKALEEEEDDRPYDPEEE---YDPERAFDTQLVERGR 1406
Query: 105 WPTLEKAATMTAAGHHAEVVVDPEDERAIEMFMNKNPPARRTLADIIMEKLTE-KQTEVE 163
+E+A AA EV DPEDE +E A+ T+ D+ + ++ VE
Sbjct: 1407 RHEVERAPE-AAAAEREEVAYDPEDETILE-------EAKVTVDDLPNRMCADVRRNSVE 1458
Query: 164 TVMSEVSGFPMPQL 177
V+G P L
Sbjct: 1459 RPAEPVAGAATPSL 1472
>gi|224589132 hypothetical protein LOC100132406 [Homo sapiens]
Length = 3628
Score = 32.7 bits (73), Expect = 0.67
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 24/147 (16%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGTGDKPAAPRERTT 87
R +E+RRGR GE ++ PRLSR +L + + Q+ L+ + T P+ E T
Sbjct: 1573 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYST---PSGCLELTD 1629
Query: 88 RLGPRMPQDGSDDEDEEWPTLEKAATMTAAGHHAEVVVDPED-ERAIEMFMNKNPPARRT 146
P ++A H + VD ++ E+ E+ +++P R
Sbjct: 1630 SCQP-----------------YRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRL 1672
Query: 147 LADIIMEKLTE-KQTEVETVMSEVSGF 172
+++ EK E Q ++ S SG+
Sbjct: 1673 SRELLDEKEPEVLQDSLDRCYSTPSGY 1699
Score = 32.7 bits (73), Expect = 0.67
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 24/147 (16%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGTGDKPAAPRERTT 87
R +E+RRGR GE ++ PRLSR +L + + Q+ L+ + T P+ E T
Sbjct: 1817 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYST---PSGCLELTD 1873
Query: 88 RLGPRMPQDGSDDEDEEWPTLEKAATMTAAGHHAEVVVDPED-ERAIEMFMNKNPPARRT 146
P ++A H + VD ++ E+ E+ +++P R
Sbjct: 1874 SCQP-----------------YRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRL 1916
Query: 147 LADIIMEKLTE-KQTEVETVMSEVSGF 172
+++ EK E Q ++ S SG+
Sbjct: 1917 SRELLDEKEPEVLQDSLDRCYSTPSGY 1943
Score = 32.7 bits (73), Expect = 0.67
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 24/147 (16%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGTGDKPAAPRERTT 87
R +E+RRGR GE ++ PRLSR +L + + Q+ L+ + T P+ E T
Sbjct: 2061 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYST---PSGCLELTD 2117
Query: 88 RLGPRMPQDGSDDEDEEWPTLEKAATMTAAGHHAEVVVDPED-ERAIEMFMNKNPPARRT 146
P ++A H + VD ++ E+ E+ +++P R
Sbjct: 2118 SCQP-----------------YRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRL 2160
Query: 147 LADIIMEKLTE-KQTEVETVMSEVSGF 172
+++ EK E Q ++ S SG+
Sbjct: 2161 SRELLDEKEPEVLQDSLDRCYSTPSGY 2187
Score = 32.7 bits (73), Expect = 0.67
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 24/147 (16%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGTGDKPAAPRERTT 87
R +E+RRGR GE ++ PRLSR +L + + Q+ L+ + T P+ E T
Sbjct: 2305 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYST---PSGCLELTD 2361
Query: 88 RLGPRMPQDGSDDEDEEWPTLEKAATMTAAGHHAEVVVDPED-ERAIEMFMNKNPPARRT 146
P ++A H + VD ++ E+ E+ +++P R
Sbjct: 2362 SCQP-----------------YRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRL 2404
Query: 147 LADIIMEKLTE-KQTEVETVMSEVSGF 172
+++ EK E Q ++ S SG+
Sbjct: 2405 SRELLDEKEPEVLQDSLDRCYSTPSGY 2431
Score = 32.7 bits (73), Expect = 0.67
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 24/147 (16%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGTGDKPAAPRERTT 87
R +E+RRGR GE ++ PRLSR +L + + Q+ L+ + T P+ E T
Sbjct: 2549 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYST---PSGCLELTD 2605
Query: 88 RLGPRMPQDGSDDEDEEWPTLEKAATMTAAGHHAEVVVDPED-ERAIEMFMNKNPPARRT 146
P ++A H + VD ++ E+ E+ +++P R
Sbjct: 2606 SCQP-----------------YRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRL 2648
Query: 147 LADIIMEKLTE-KQTEVETVMSEVSGF 172
+++ EK E Q ++ S SG+
Sbjct: 2649 SRELLDEKEPEVLQDSLDRCYSTPSGY 2675
Score = 32.7 bits (73), Expect = 0.67
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 24/147 (16%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGTGDKPAAPRERTT 87
R +E+RRGR GE ++ PRLSR +L + + Q+ L+ + T P+ E T
Sbjct: 2793 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRCYST---PSGCLELTD 2849
Query: 88 RLGPRMPQDGSDDEDEEWPTLEKAATMTAAGHHAEVVVDPED-ERAIEMFMNKNPPARRT 146
P ++A H + VD ++ E+ E+ +++P R
Sbjct: 2850 SCQP-----------------YRSAFYVLEQQHVGLAVDMDEIEKYQEVEEDQDPSCPRL 2892
Query: 147 LADIIMEKLTE-KQTEVETVMSEVSGF 172
+++ EK E Q ++ S SG+
Sbjct: 2893 SRELLDEKEPEVLQDSLDRCYSTPSGY 2919
Score = 30.8 bits (68), Expect = 2.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQ 61
R +E+RRGR GE ++ PRLSR +L +
Sbjct: 839 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDE 870
Score = 30.8 bits (68), Expect = 2.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQ 61
R +E+RRGR GE ++ PRLSR +L +
Sbjct: 1083 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDE 1114
Score = 30.8 bits (68), Expect = 2.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQ 61
R +E+RRGR GE ++ PRLSR +L +
Sbjct: 1327 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDE 1358
Score = 30.8 bits (68), Expect = 2.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQ 61
R +E+RRGR GE ++ PRLSR +L +
Sbjct: 3037 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDE 3068
Score = 30.8 bits (68), Expect = 2.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQ 61
R +E+RRGR GE ++ PRLSR +L +
Sbjct: 3356 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDE 3387
>gi|239741309 PREDICTED: hypothetical protein XP_002344485 [Homo
sapiens]
Length = 4621
Score = 32.3 bits (72), Expect = 0.87
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGT 75
R +E+RRGR GE ++ PRLSR +L + + Q+ L+ + T
Sbjct: 839 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRSYST 886
Score = 32.3 bits (72), Expect = 0.87
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGT 75
R +E+RRGR GE ++ PRLSR +L + + Q+ L+ + T
Sbjct: 1327 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRSYST 1374
Score = 32.3 bits (72), Expect = 0.87
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGT 75
R +E+RRGR GE ++ PRLSR +L + + Q+ L+ + T
Sbjct: 1815 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRSYST 1862
Score = 32.3 bits (72), Expect = 0.87
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGT 75
R +E+RRGR GE ++ PRLSR +L + + Q+ L+ + T
Sbjct: 2059 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRSYST 2106
Score = 32.3 bits (72), Expect = 0.87
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGT 75
R +E+RRGR GE ++ PRLSR +L + + Q+ L+ + T
Sbjct: 2303 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRSYST 2350
Score = 32.3 bits (72), Expect = 0.87
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGT 75
R +E+RRGR GE ++ PRLSR +L + + Q+ L+ + T
Sbjct: 2547 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRSYST 2594
Score = 31.6 bits (70), Expect = 1.5
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGT 75
R +E+RRGR GE ++ PRLSR +L + + Q+ L+ + T
Sbjct: 2791 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKEPEVLQDSLDRCYST 2838
Score = 31.6 bits (70), Expect = 1.5
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGT 75
R +E+RRGR GE ++ PRLSR +L + + Q+ L+ + T
Sbjct: 2960 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKEPEVLQDSLDRCYST 3007
Score = 31.6 bits (70), Expect = 1.5
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGT 75
R +E+RRGR GE ++ PRLSR +L + + Q+ L+ + T
Sbjct: 3129 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKEPEVLQDSLDRCYST 3176
Score = 30.8 bits (68), Expect = 2.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQ 61
R +E+RRGR GE ++ PRLSR +L +
Sbjct: 1083 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDE 1114
Score = 30.8 bits (68), Expect = 2.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQ 61
R +E+RRGR GE ++ PRLSR +L +
Sbjct: 1571 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDE 1602
Score = 30.8 bits (68), Expect = 2.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQ 61
R +E+RRGR GE ++ PRLSR +L +
Sbjct: 3298 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDE 3329
Score = 30.8 bits (68), Expect = 2.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQ 61
R +E+RRGR GE ++ PRLSR +L +
Sbjct: 3542 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDE 3573
Score = 30.8 bits (68), Expect = 2.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQ 61
R +E+RRGR GE ++ PRLSR +L +
Sbjct: 3786 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDE 3817
Score = 30.8 bits (68), Expect = 2.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQ 61
R +E+RRGR GE ++ PRLSR +L +
Sbjct: 4274 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDE 4305
Score = 30.4 bits (67), Expect = 3.3
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQ 61
R +E+RRGR GE ++ PRLSR +L +
Sbjct: 4030 RRSKKERRRGRKEGEEDQTPPCPRLSRELLDE 4061
>gi|169162915 PREDICTED: hypothetical protein LOC728841 [Homo sapiens]
Length = 3815
Score = 32.3 bits (72), Expect = 0.87
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGT 75
R +E+RRGR GE ++ PRLSR +L + + Q+ L+ + T
Sbjct: 2071 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRSYST 2118
Score = 32.3 bits (72), Expect = 0.87
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGT 75
R +E+RRGR GE ++ PRLSR +L + + Q+ L+ + T
Sbjct: 3479 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKGPEVLQDSLDRSYST 3526
Score = 31.6 bits (70), Expect = 1.5
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGT 75
R +E+RRGR GE ++ PRLSR +L + + Q+ L+ + T
Sbjct: 832 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKEPEVLQDSLDRCYST 879
Score = 31.6 bits (70), Expect = 1.5
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGT 75
R +E+RRGR GE ++ PRLSR +L + + Q+ L+ + T
Sbjct: 1076 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKEPEVLQDSLDRCYST 1123
Score = 31.6 bits (70), Expect = 1.5
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGT 75
R +E+RRGR GE ++ PRLSR +L + + Q+ L+ + T
Sbjct: 1245 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKEPEVLQDSLDRCYST 1292
Score = 31.6 bits (70), Expect = 1.5
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGT 75
R +E+RRGR GE ++ PRLSR +L + + Q+ L+ + T
Sbjct: 1414 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKEPEVLQDSLDRCYST 1461
Score = 31.6 bits (70), Expect = 1.5
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGT 75
R +E+RRGR GE ++ PRLSR +L + + Q+ L+ + T
Sbjct: 2559 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKEPEVLQDSLDRCYST 2606
Score = 31.6 bits (70), Expect = 1.5
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGT 75
R +E+RRGR GE ++ PRLSR +L + + Q+ L+ + T
Sbjct: 2972 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKEPEVLQDSLDRCYST 3019
Score = 31.6 bits (70), Expect = 1.5
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGT 75
R +E+RRGR GE ++ PRLSR +L + + Q+ L+ + T
Sbjct: 3141 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKEPEVLQDSLDRCYST 3188
Score = 31.6 bits (70), Expect = 1.5
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGT 75
R +E+RRGR GE ++ PRLSR +L + + Q+ L+ + T
Sbjct: 3310 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDEKEPEVLQDSLDRCYST 3357
Score = 30.8 bits (68), Expect = 2.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQ 61
R +E+RRGR GE ++ PRLSR +L +
Sbjct: 588 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDE 619
Score = 30.8 bits (68), Expect = 2.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQ 61
R +E+RRGR GE ++ PRLSR +L +
Sbjct: 1583 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDE 1614
Score = 30.8 bits (68), Expect = 2.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQ 61
R +E+RRGR GE ++ PRLSR +L +
Sbjct: 1827 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDE 1858
Score = 30.8 bits (68), Expect = 2.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQ 61
R +E+RRGR GE ++ PRLSR +L +
Sbjct: 2315 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDE 2346
Score = 30.8 bits (68), Expect = 2.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQ 61
R +E+RRGR GE ++ PRLSR +L +
Sbjct: 2728 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDE 2759
Score = 30.8 bits (68), Expect = 2.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQ 61
R +E+RRGR GE ++ PRLSR +L +
Sbjct: 3723 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDE 3754
>gi|50658065 SMC4 structural maintenance of chromosomes 4-like 1
[Homo sapiens]
Length = 1288
Score = 32.0 bits (71), Expect = 1.1
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Query: 76 GDKPAAPRERTTRLGPRMPQDGSDDEDEEWPTLEKAATMTAAGHHAEVVVDPEDERAIEM 135
G +P+ R R P P S D + E P+ + TA AE + D R++E
Sbjct: 5 GTQPSTARRREEGPPPPSPDGASSDAEPEPPSGRTESPATA----AETASEELDNRSLEE 60
Query: 136 FMNKNPP 142
+N PP
Sbjct: 61 ILNSIPP 67
>gi|50658063 SMC4 structural maintenance of chromosomes 4-like 1
[Homo sapiens]
Length = 1288
Score = 32.0 bits (71), Expect = 1.1
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Query: 76 GDKPAAPRERTTRLGPRMPQDGSDDEDEEWPTLEKAATMTAAGHHAEVVVDPEDERAIEM 135
G +P+ R R P P S D + E P+ + TA AE + D R++E
Sbjct: 5 GTQPSTARRREEGPPPPSPDGASSDAEPEPPSGRTESPATA----AETASEELDNRSLEE 60
Query: 136 FMNKNPP 142
+N PP
Sbjct: 61 ILNSIPP 67
>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
Length = 2003
Score = 31.6 bits (70), Expect = 1.5
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Query: 13 QEKHAPLADQILAGNAVRAGVREKRR------GRGTGEAEEEYVGPRL----SRRILQQA 62
Q+ +AD++ GN +A + E++R G+ E EEE L R++L Q
Sbjct: 1732 QQDRDEMADEVANGNLSKAAILEEKRQLEGRLGQLEEELEEEQSNSELLNDRYRKLLLQV 1791
Query: 63 RQQQEELEAEHGTGDKPAAPRERTTR 88
EL AE K + R++ R
Sbjct: 1792 ESLTTELSAERSFSAKAESGRQQLER 1817
>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
Length = 1995
Score = 31.6 bits (70), Expect = 1.5
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Query: 13 QEKHAPLADQILAGNAVRAGVREKRR------GRGTGEAEEEYVGPRL----SRRILQQA 62
Q+ +AD++ GN +A + E++R G+ E EEE L R++L Q
Sbjct: 1724 QQDRDEMADEVANGNLSKAAILEEKRQLEGRLGQLEEELEEEQSNSELLNDRYRKLLLQV 1783
Query: 63 RQQQEELEAEHGTGDKPAAPRERTTR 88
EL AE K + R++ R
Sbjct: 1784 ESLTTELSAERSFSAKAESGRQQLER 1809
>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
Length = 2036
Score = 31.6 bits (70), Expect = 1.5
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Query: 13 QEKHAPLADQILAGNAVRAGVREKRR------GRGTGEAEEEYVGPRL----SRRILQQA 62
Q+ +AD++ GN +A + E++R G+ E EEE L R++L Q
Sbjct: 1765 QQDRDEMADEVANGNLSKAAILEEKRQLEGRLGQLEEELEEEQSNSELLNDRYRKLLLQV 1824
Query: 63 RQQQEELEAEHGTGDKPAAPRERTTR 88
EL AE K + R++ R
Sbjct: 1825 ESLTTELSAERSFSAKAESGRQQLER 1850
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 31.2 bits (69), Expect = 1.9
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQQEELEAEHGTGDKPAAPRERTTRL 89
+A R K+ R EAEEE SRR LQ R+ + EA G + + + R R
Sbjct: 1874 KANARMKQLKRQLEEAEEEATRANASRRKLQ--RELDDATEANEGLSREVSTLKNRLRRG 1931
Query: 90 GP 91
GP
Sbjct: 1932 GP 1933
>gi|7657017 hypothetical protein LOC25832 [Homo sapiens]
Length = 921
Score = 30.8 bits (68), Expect = 2.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQ 61
R +E+RRGR GE ++ PRLSR +L +
Sbjct: 499 RRSKKERRRGRKEGEEDQNPPCPRLSRELLDE 530
>gi|229577000 ecotropic viral integration site 5-like isoform 1
[Homo sapiens]
Length = 805
Score = 30.4 bits (67), Expect = 3.3
Identities = 38/157 (24%), Positives = 61/157 (38%), Gaps = 25/157 (15%)
Query: 13 QEKHAPLADQILAGNAVRAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQQEELEAE 72
+++ A LAD+++ G RA EAEE YV R + QQ E+L+
Sbjct: 399 EKESAALADRLIQGQVTRAQ-----------EAEENYVIKRELAVVRQQCSSAAEDLQKA 447
Query: 73 HGTGDKPAAPRERTTRLGPRMPQD--GSDDEDEEWPTLEKAATMTAAGHHAEVVVDPEDE 130
T + +E PR+ +D + + E L + T+ A + V+D E
Sbjct: 448 QSTIRQLQEQQE-----NPRLTEDFVSHLETELEQSRLRETETLGALREMQDKVLDMEKR 502
Query: 131 RAIEMFMNKNPPARRTLADIIMEKLTEKQTEVETVMS 167
N + P +A + E K E + V S
Sbjct: 503 -------NSSLPDENNVAQLQEELKALKVREGQAVAS 532
>gi|4505835 polycystin 2 [Homo sapiens]
Length = 968
Score = 30.4 bits (67), Expect = 3.3
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 33 VREKRRGRGTGEAEEEYVGPRLSR----RILQQARQQQE---ELEAEHGTGDKPAAPRER 85
+R+ +G+G +AE E + + + + + QQ E E E D + PR
Sbjct: 741 LRQDLKGKGHTDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLEKEREDLDLDHSSLPRPM 800
Query: 86 TTRLGPRMPQDGSDDEDEE 104
++R PR D +D+DE+
Sbjct: 801 SSRSFPRSLDDSEEDDDED 819
>gi|20149594 heat shock 90kDa protein 1, beta [Homo sapiens]
Length = 724
Score = 30.4 bits (67), Expect = 3.3
Identities = 21/107 (19%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
Query: 35 EKRRGRGTGEAEEEYVGPRLSRRILQQARQQQEELEAEHGTGDKPAAPRERTTRLGPRMP 94
E+RR + + +++G ++ + ++ ++ + EAE G+K ++ + P++
Sbjct: 194 EERRVKEVVKKHSQFIGYPITLYLEKEREKEISDDEAEEEKGEKEEEDKDDEEK--PKIE 251
Query: 95 QDGSDDEDEEWPTLEKAATMTAAGHHAEVVVDPEDERAIEMFMNKNP 141
GSD+ED+ +K E +D E+ + +NP
Sbjct: 252 DVGSDEEDDSGKDKKKKTKKI-----KEKYIDQEELNKTKPIWTRNP 293
>gi|4504487 histidine rich calcium binding protein precursor [Homo
sapiens]
Length = 699
Score = 30.4 bits (67), Expect = 3.3
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 40 RGTGEAEEEYVGPRLSRRILQQARQQQEELEAEHGTGDKPAAPRERTTRLGPRMPQDGSD 99
R + E+E G LS L Q +++E+ E E D+ RE +G + D S+
Sbjct: 514 RDQEDEEDEEEGHGLS---LNQEEEEEEDKEEEEEEEDEER--REERAEVGAPLSPDHSE 568
Query: 100 DEDEEWPTLEK 110
+E+EE LE+
Sbjct: 569 EEEEEEEGLEE 579
>gi|13569843 nucleolar protein 7, 27kDa [Homo sapiens]
Length = 257
Score = 30.4 bits (67), Expect = 3.3
Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 28/130 (21%)
Query: 52 PRLSRRILQQARQQQEELEAEHG------TGDKPAAPRERTTRLGPRMPQDGSDDEDEEW 105
P + ++ + + EE EAEHG + A P E ++G D+ D+E
Sbjct: 12 PASAEAMVDEGQLASEEEEAEHGLLLGQPSSGAAAEPLEE--------DEEGDDEFDDEA 63
Query: 106 PTLEKAATMTAAGHHAE-----------VVVDPEDERAIEMFMNKNPPARRTLADIIMEK 154
P A+ A E ++ + +R E+F+ + R+ L D I+EK
Sbjct: 64 PEELTFASAQAEAREEERRVRETVRRDKTLLKEKRKRREELFIEQK--KRKLLPDTILEK 121
Query: 155 L-TEKQTEVE 163
L T QT ++
Sbjct: 122 LTTASQTNIK 131
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 30.4 bits (67), Expect = 3.3
Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 9/161 (5%)
Query: 3 KFKAARGVGGQEKHAPLADQILAGNAVRAGVREKRRGRGTGEAEEEYVGPRLSRRILQQA 62
K K R + K A ++ A R E RR R + EEE R + +LQ+
Sbjct: 612 KAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQEEEE----RRHQELLQKK 667
Query: 63 RQQQEELEAEHGTGDKPAAPRERTTRLGPRMPQDGSDDEDEEWPTLEKAATMTAAGHHAE 122
+++++E + + A RE+ R R Q+ + E E E+ + E
Sbjct: 668 KEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLAEQERRRE 727
Query: 123 VVVDPEDERAIEMFMNKNPPARRTLADIIMEKLTEKQTEVE 163
++ E + + A R + + +L EK+ + E
Sbjct: 728 -----QERLQAERELQEREKALRLQKEQLQRELEEKKKKEE 763
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 30.4 bits (67), Expect = 3.3
Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 9/161 (5%)
Query: 3 KFKAARGVGGQEKHAPLADQILAGNAVRAGVREKRRGRGTGEAEEEYVGPRLSRRILQQA 62
K K R + K A ++ A R E RR R + EEE R + +LQ+
Sbjct: 608 KAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQEEEE----RRHQELLQKK 663
Query: 63 RQQQEELEAEHGTGDKPAAPRERTTRLGPRMPQDGSDDEDEEWPTLEKAATMTAAGHHAE 122
+++++E + + A RE+ R R Q+ + E E E+ + E
Sbjct: 664 KEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLAEQERRRE 723
Query: 123 VVVDPEDERAIEMFMNKNPPARRTLADIIMEKLTEKQTEVE 163
++ E + + A R + + +L EK+ + E
Sbjct: 724 -----QERLQAERELQEREKALRLQKEQLQRELEEKKKKEE 759
>gi|71274178 developing brain homeobox 1 [Homo sapiens]
Length = 382
Score = 30.4 bits (67), Expect = 3.3
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Query: 40 RGTGEAEEEYVGPRLSRRILQQARQQQEELEAEHGTGDKPAAPRERTTRLGPRMPQDGSD 99
+G G EEE S R+ A + L G P +P ++ P P D SD
Sbjct: 310 KGPGNEEEEEGPGSPSHRLAYHASSDPQHLRDPRLPGPLPPSPAHSSS---PGKPSDFSD 366
Query: 100 DEDEE 104
E+EE
Sbjct: 367 SEEEE 371
>gi|38788333 remodeling and spacing factor 1 [Homo sapiens]
Length = 1441
Score = 30.0 bits (66), Expect = 4.3
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 14/90 (15%)
Query: 36 KRRGRGTGE------AEEEYVGPRLSRRILQQARQQQEELEAEHGTGDKPAAPRERTTRL 89
++RGR T E EEE G +R+ + ++E + HG ++PA R+ R+
Sbjct: 1272 RKRGRSTDEYSEADEEEEEEEGKPSRKRLHRIETDEEESCDNAHGDANQPA--RDSQPRV 1329
Query: 90 GP------RMPQDGSDDEDEEWPTLEKAAT 113
P + P DE+E++ + K +
Sbjct: 1330 LPSEQESTKKPYRIESDEEEDFENVGKVGS 1359
>gi|110349786 Alstrom syndrome 1 [Homo sapiens]
Length = 4169
Score = 30.0 bits (66), Expect = 4.3
Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 22/130 (16%)
Query: 93 MPQDGSDDEDEEWPTLEKAATMTAAGHHAEVVVDPEDE---RAIEMFMNKNPPARRTLAD 149
+ ++ ++E+EE E+AA AA VVV+ +E R ++ + P ++ D
Sbjct: 12 LEEEEEEEEEEEEEEEEEAAAAAAANVDDVVVVEEVEEEAGRELDSDSHYGPQHLESIDD 71
Query: 150 IIMEKLTEKQTEVETVMSEVSGFPMPQLDPRVLEVYRGVREVLSKYRSGKLPKAFKIIPA 209
E+ E + + G +P L P +Y G+ KI+P
Sbjct: 72 -------EEDEEAKAWLQAHPGRILPPLSP-----------PQHRYSEGERTSLEKIVPL 113
Query: 210 LSN-WEQILY 218
+ W+QI+Y
Sbjct: 114 TCHVWQQIVY 123
>gi|239758011 PREDICTED: hypothetical protein LOC728841, partial
[Homo sapiens]
Length = 166
Score = 30.0 bits (66), Expect = 4.3
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 30 RAGVREKRRGRGTGEAEEEYVGPRLSRRILQQARQQ--QEELEAEHGT 75
R +++RRGR GE ++ PRLSR +L + + Q+ L+ + T
Sbjct: 43 RRSKKKRRRGRKEGEEDQNPPCPRLSRELLDEKEPEVLQDSLDRCYST 90
>gi|4502131 amyloid beta A4 precursor protein-binding, family B,
member 1 isoform E9 [Homo sapiens]
Length = 710
Score = 30.0 bits (66), Expect = 4.3
Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 20/111 (18%)
Query: 22 QILAGNAVRAGVRE-----KRRGRGTGEAEEEYVGPRLSRRILQQARQQQEELEAEHGTG 76
++ A NA G+R + +G E EE+ G +++E+L + G
Sbjct: 121 ELSAHNAANRGLRGPGLIISTQEQGPDEGEEKAAGEAEEEEEDDDDEEEEEDLSSPPGLP 180
Query: 77 DK----PAAPRERTTRLGPR-----------MPQDGSDDEDEEWPTLEKAA 112
+ A PR + GPR M + DED W TL + +
Sbjct: 181 EPLESVEAPPRPQALTDGPREHSKSASLLFGMRNSAASDEDSSWATLSQGS 231
>gi|22035554 amyloid beta A4 precursor protein-binding, family B,
member 1 isoform delta E9 [Homo sapiens]
Length = 708
Score = 30.0 bits (66), Expect = 4.3
Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 20/111 (18%)
Query: 22 QILAGNAVRAGVRE-----KRRGRGTGEAEEEYVGPRLSRRILQQARQQQEELEAEHGTG 76
++ A NA G+R + +G E EE+ G +++E+L + G
Sbjct: 121 ELSAHNAANRGLRGPGLIISTQEQGPDEGEEKAAGEAEEEEEDDDDEEEEEDLSSPPGLP 180
Query: 77 DK----PAAPRERTTRLGPR-----------MPQDGSDDEDEEWPTLEKAA 112
+ A PR + GPR M + DED W TL + +
Sbjct: 181 EPLESVEAPPRPQALTDGPREHSKSASLLFGMRNSAASDEDSSWATLSQGS 231
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,680,794
Number of Sequences: 37866
Number of extensions: 763686
Number of successful extensions: 2917
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 2789
Number of HSP's gapped (non-prelim): 170
length of query: 437
length of database: 18,247,518
effective HSP length: 105
effective length of query: 332
effective length of database: 14,271,588
effective search space: 4738167216
effective search space used: 4738167216
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.