Guide to the Human Genome
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Name: TBCE Sequence: fasta or formatted (527aa) NCBI GI: 118442828
Description:

beta-tubulin cofactor E

Referenced in:

Dynein and Dynactin
Leucine-rich Repeat Family
Tubulins and Microtubules

Other entries for this name:
alt mRNA [527aa] beta-tubulin cofactor E
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         23           1
 C cysteine            2.1         11           1
 D aspartate           4.7         25           1
 E glutamate           8.3         44           2
 F phenylalanine       3.0         16           2
 G glycine             6.5         34           2
 H histidine           2.1         11           1
 I isoleucine          4.9         26           2
 K lysine              7.4         39           2
 L leucine            14.0         74           3
 M methionine          0.9          5           1
 N asparagine          4.9         26           2
 P proline             5.1         27           2
 Q glutamine           4.6         24           2
 R arginine            4.9         26           3
 S serine              7.0         37           2
 T threonine           4.6         24           1
 V valine              6.8         36           2
 W tryptophan          1.5          8           1
 Y tyrosine            2.1         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   beta-tubulin cofactor E 
TBCE                  1.000   beta-tubulin cofactor E 
TBCEL                 0.099   tubulin folding cofactor E-like 
TBCEL                 0.099   tubulin folding cofactor E-like 
LRRC23                0.029   leucine rich repeat containing 23 isoform a 
LRRC23                0.029   leucine rich repeat containing 23 isoform a 
CLIP3                 0.024   CAP-GLY domain containing linker protein 3 
CLIP4                 0.024   CAP-GLY domain containing linker protein family, mem...
PPP1R7                0.023   protein phosphatase 1, regulatory subunit 7 
CLIP1                 0.022   restin isoform b 
CLIP1                 0.022   restin isoform a 
LRIG2                 0.022   leucine-rich repeats and immunoglobulin-like domains ...
LRRC8D                0.021   leucine rich repeat containing 8 family, member D [...
LRRC8D                0.021   leucine rich repeat containing 8 family, member D [H...
KIF13B                0.021   kinesin family member 13B 
TBCB                  0.020   cytoskeleton associated protein 1 
LRRC15                0.020   leucine rich repeat containing 15 isoform a 
LRRC15                0.020   leucine rich repeat containing 15 isoform b 
DCTN1                 0.019   dynactin 1 isoform 3 
DCTN1                 0.019   dynactin 1 isoform 1 
CLIP2                 0.019   CAP-GLY domain containing linker protein 2 isoform ...
CLIP2                 0.019   CAP-GLY domain containing linker protein 2 isoform 2...
OMG                   0.019   oligodendrocyte myelin glycoprotein 
CEP350                0.019   centrosome-associated protein 350 
LRRC7                 0.018   leucine rich repeat containing 7 
SNRPA1                0.018   small nuclear ribonucleoprotein polypeptide A' [Homo...
LRRC57                0.016   leucine rich repeat containing 57 
XRRA1                 0.016   X-ray radiation resistance associated 1 
LRRC28                0.016   leucine rich repeat containing 28 
MFHAS1                0.015   malignant fibrous histiocytoma amplified sequence 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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