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Search of human proteins with 5032213
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5032213 solute carrier family 35, member B1 [Homo sapiens]
(322 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5032213 solute carrier family 35, member B1 [Homo sapiens] 641 0.0
gi|30026034 solute carrier family 35, member B2 [Homo sapiens] 132 4e-31
gi|216547942 solute carrier family 35, member B3 [Homo sapiens] 115 7e-26
gi|216547920 solute carrier family 35, member B3 [Homo sapiens] 115 7e-26
gi|21361503 solute carrier family 35, member B3 [Homo sapiens] 115 7e-26
gi|14249528 solute carrier family 35, member B4 [Homo sapiens] 68 1e-11
gi|164607128 solute carrier family 35, member E1 [Homo sapiens] 42 7e-04
gi|27881499 solute carrier family 35, member C2 isoform a [Homo ... 38 0.011
gi|21314776 solute carrier family 35, member C2 isoform a [Homo ... 38 0.011
gi|223671915 GDP-fucose transporter 1 isoform a [Homo sapiens] 37 0.024
gi|223671919 GDP-fucose transporter 1 isoform b [Homo sapiens] 37 0.024
gi|223671917 GDP-fucose transporter 1 isoform b [Homo sapiens] 37 0.024
gi|160707905 similar to solute carrier family 35, member E2 [Hom... 35 0.069
gi|56699411 solute carrier family 35, member E2 [Homo sapiens] 32 0.58
gi|56912198 solute carrier family 35, member D3 [Homo sapiens] 32 0.76
gi|5453621 solute carrier family 35 (CMP-sialic acid transporter... 32 0.99
gi|30581137 phosphatidylinositol glycan anchor biosynthesis, cla... 31 1.3
gi|155969705 chloride channel Kb [Homo sapiens] 31 1.7
gi|49533617 sterol O-acyltransferase 1 [Homo sapiens] 30 2.2
gi|27881496 solute carrier family 35, member C2 isoform b [Homo ... 30 3.8
gi|150421681 ATPase, class VI, type 11A isoform b [Homo sapiens] 28 8.4
gi|150421684 ATPase, class VI, type 11A isoform a [Homo sapiens] 28 8.4
>gi|5032213 solute carrier family 35, member B1 [Homo sapiens]
Length = 322
Score = 641 bits (1654), Expect = 0.0
Identities = 322/322 (100%), Positives = 322/322 (100%)
Query: 1 MASSSSLVPDRLRLPLCFLGVFVCYFYYGILQEKITRGKYGEGAKQETFTFALTLVFIQC 60
MASSSSLVPDRLRLPLCFLGVFVCYFYYGILQEKITRGKYGEGAKQETFTFALTLVFIQC
Sbjct: 1 MASSSSLVPDRLRLPLCFLGVFVCYFYYGILQEKITRGKYGEGAKQETFTFALTLVFIQC 60
Query: 61 VINAVFAKILIQFFDTARVDRTRSWLYAACSISYLGAMVSSNSALQFVNYPTQVLGKSCK 120
VINAVFAKILIQFFDTARVDRTRSWLYAACSISYLGAMVSSNSALQFVNYPTQVLGKSCK
Sbjct: 61 VINAVFAKILIQFFDTARVDRTRSWLYAACSISYLGAMVSSNSALQFVNYPTQVLGKSCK 120
Query: 121 PIPVMLLGVTLLKKKYPLAKYLCVLLIVAGVALFMYKPKKVVGIEEHTVGYGELLLLLSL 180
PIPVMLLGVTLLKKKYPLAKYLCVLLIVAGVALFMYKPKKVVGIEEHTVGYGELLLLLSL
Sbjct: 121 PIPVMLLGVTLLKKKYPLAKYLCVLLIVAGVALFMYKPKKVVGIEEHTVGYGELLLLLSL 180
Query: 181 TLDGLTGVSQDHMRAHYQTGSNHMMLNINLWSTLLLGMGILFTGELWEFLSFAERYPAII 240
TLDGLTGVSQDHMRAHYQTGSNHMMLNINLWSTLLLGMGILFTGELWEFLSFAERYPAII
Sbjct: 181 TLDGLTGVSQDHMRAHYQTGSNHMMLNINLWSTLLLGMGILFTGELWEFLSFAERYPAII 240
Query: 241 YNILLFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISPMQWVGT 300
YNILLFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISPMQWVGT
Sbjct: 241 YNILLFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISPMQWVGT 300
Query: 301 VLVFLGLGLDAKFGKGAKKTSH 322
VLVFLGLGLDAKFGKGAKKTSH
Sbjct: 301 VLVFLGLGLDAKFGKGAKKTSH 322
>gi|30026034 solute carrier family 35, member B2 [Homo sapiens]
Length = 432
Score = 132 bits (332), Expect = 4e-31
Identities = 96/298 (32%), Positives = 145/298 (48%), Gaps = 4/298 (1%)
Query: 12 LRLPLCFLGVFVCYFYYGILQEKITRGKYGEGAKQ--ETFTFALTLVFIQCVINAVFAKI 69
L+L C G+ V Y +G+LQE++ YG A E FT + LV + V+ + A +
Sbjct: 110 LKLLFCATGLQVSYLTWGVLQERVMTRSYGATATSPGERFTDSQFLVLMNRVLALIVAGL 169
Query: 70 LIQFFDTARVDRTRSWLYAACSISYLGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGV 129
R + Y+ S+S + + AL+FV++PTQVL K+ K IPVML+G
Sbjct: 170 SCVLCKQPR-HGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPVMLMGK 228
Query: 130 TLLKKKYPLAKYLCVLLIVAGVALFMYKPKKVVGIEEHTVGYGELLLLLSLTLDGLTGVS 189
+ ++ Y +YL LI GV++F+ T G +LL + D T
Sbjct: 229 LVSRRSYEHWEYLTATLISIGVSMFLLSSGPEPRSSPATTLSGLILLAGYIAFDSFTSNW 288
Query: 190 QDHMRAHYQTGSNHMMLNINLWSTLLLGMGILFTGELWEFLSFAERYPAIIYNILLFGLT 249
QD + A Y+ S MM +N +S L +L G L E F R+ + LL +
Sbjct: 289 QDALFA-YKMSSVQMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHSEFAAHALLLSIC 347
Query: 250 SALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISPMQWVGTVLVFLGL 307
SA GQ FIF T+ FG +II T R+ F IL S +L+ + ++ + +G +VF L
Sbjct: 348 SACGQLFIFYTIGQFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAAL 405
>gi|216547942 solute carrier family 35, member B3 [Homo sapiens]
Length = 401
Score = 115 bits (287), Expect = 7e-26
Identities = 93/297 (31%), Positives = 138/297 (46%), Gaps = 14/297 (4%)
Query: 16 LCFLGVFVCYFYYGILQEKITRGKYGEGAKQETFTFALTLVFIQCVINAVFAKILIQFFD 75
+C GVFV Y YG LQE I EG K + L +Q ++F I +Q
Sbjct: 83 ICVAGVFVFYLIYGYLQELIFSV---EGFK----SCGWYLTLVQFAFYSIFGLIELQLIQ 135
Query: 76 TARVDRTRSWLYAACSISYLGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVTLLKKK 135
R R Y + +G M SN++L ++NYPTQV+ K CK IPVML GV + K+
Sbjct: 136 DKR-RRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLGGVFIQGKR 194
Query: 136 YPLAKYLCVLLIVAGVALFMYKPKKVVGIEEHTVGYGELLLLLSLTLDGLTG-VSQDHMR 194
Y +A + + G+ F T G +L+ L+L D + G V + M+
Sbjct: 195 YNVADVSAAICMSLGLIWFTLADSTTAPNFNLT---GVVLISLALCADAVIGNVQEKAMK 251
Query: 195 AHYQTGSNHMMLNINLWSTLLLGMGILFTGELWEFLSFAERYPAIIYN-ILLFGLTSALG 253
H + S ++ + ++ +L +G+ T L ++F + P Y LF LT G
Sbjct: 252 LHNASNSEMVLYSYSIGFVYIL-LGLTCTSGLGPAVTFCAKNPVRTYGYAFLFSLTGYFG 310
Query: 254 QSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISPMQWVGTVLVFLGLGLD 310
SF+ + FG L +TT RK TI+ S I FA P + +LV LG+ L+
Sbjct: 311 ISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFAKPFTFQYVWSGLLVVLGIFLN 367
>gi|216547920 solute carrier family 35, member B3 [Homo sapiens]
Length = 401
Score = 115 bits (287), Expect = 7e-26
Identities = 93/297 (31%), Positives = 138/297 (46%), Gaps = 14/297 (4%)
Query: 16 LCFLGVFVCYFYYGILQEKITRGKYGEGAKQETFTFALTLVFIQCVINAVFAKILIQFFD 75
+C GVFV Y YG LQE I EG K + L +Q ++F I +Q
Sbjct: 83 ICVAGVFVFYLIYGYLQELIFSV---EGFK----SCGWYLTLVQFAFYSIFGLIELQLIQ 135
Query: 76 TARVDRTRSWLYAACSISYLGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVTLLKKK 135
R R Y + +G M SN++L ++NYPTQV+ K CK IPVML GV + K+
Sbjct: 136 DKR-RRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLGGVFIQGKR 194
Query: 136 YPLAKYLCVLLIVAGVALFMYKPKKVVGIEEHTVGYGELLLLLSLTLDGLTG-VSQDHMR 194
Y +A + + G+ F T G +L+ L+L D + G V + M+
Sbjct: 195 YNVADVSAAICMSLGLIWFTLADSTTAPNFNLT---GVVLISLALCADAVIGNVQEKAMK 251
Query: 195 AHYQTGSNHMMLNINLWSTLLLGMGILFTGELWEFLSFAERYPAIIYN-ILLFGLTSALG 253
H + S ++ + ++ +L +G+ T L ++F + P Y LF LT G
Sbjct: 252 LHNASNSEMVLYSYSIGFVYIL-LGLTCTSGLGPAVTFCAKNPVRTYGYAFLFSLTGYFG 310
Query: 254 QSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISPMQWVGTVLVFLGLGLD 310
SF+ + FG L +TT RK TI+ S I FA P + +LV LG+ L+
Sbjct: 311 ISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFAKPFTFQYVWSGLLVVLGIFLN 367
>gi|21361503 solute carrier family 35, member B3 [Homo sapiens]
Length = 401
Score = 115 bits (287), Expect = 7e-26
Identities = 93/297 (31%), Positives = 138/297 (46%), Gaps = 14/297 (4%)
Query: 16 LCFLGVFVCYFYYGILQEKITRGKYGEGAKQETFTFALTLVFIQCVINAVFAKILIQFFD 75
+C GVFV Y YG LQE I EG K + L +Q ++F I +Q
Sbjct: 83 ICVAGVFVFYLIYGYLQELIFSV---EGFK----SCGWYLTLVQFAFYSIFGLIELQLIQ 135
Query: 76 TARVDRTRSWLYAACSISYLGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVTLLKKK 135
R R Y + +G M SN++L ++NYPTQV+ K CK IPVML GV + K+
Sbjct: 136 DKR-RRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLGGVFIQGKR 194
Query: 136 YPLAKYLCVLLIVAGVALFMYKPKKVVGIEEHTVGYGELLLLLSLTLDGLTG-VSQDHMR 194
Y +A + + G+ F T G +L+ L+L D + G V + M+
Sbjct: 195 YNVADVSAAICMSLGLIWFTLADSTTAPNFNLT---GVVLISLALCADAVIGNVQEKAMK 251
Query: 195 AHYQTGSNHMMLNINLWSTLLLGMGILFTGELWEFLSFAERYPAIIYN-ILLFGLTSALG 253
H + S ++ + ++ +L +G+ T L ++F + P Y LF LT G
Sbjct: 252 LHNASNSEMVLYSYSIGFVYIL-LGLTCTSGLGPAVTFCAKNPVRTYGYAFLFSLTGYFG 310
Query: 254 QSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISPMQWVGTVLVFLGLGLD 310
SF+ + FG L +TT RK TI+ S I FA P + +LV LG+ L+
Sbjct: 311 ISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFAKPFTFQYVWSGLLVVLGIFLN 367
>gi|14249528 solute carrier family 35, member B4 [Homo sapiens]
Length = 331
Score = 67.8 bits (164), Expect = 1e-11
Identities = 54/243 (22%), Positives = 104/243 (42%), Gaps = 25/243 (10%)
Query: 87 YAACSISYLGAMVSSNSALQF-VNYPTQVLGKSCKPIPVMLLGVTLLKKKYPLAKYLCVL 145
YA + V +N AL + P ++ +S I M+LG+ +LKK+Y + KY +
Sbjct: 66 YAIMVTMFFTVSVVNNYALNLNIAMPLHMIFRSGSLIANMILGIIILKKRYSIFKYTSIA 125
Query: 146 LIVAGVALFMYKPKKVVGIEEHT-------------VGYGELLLLLSLTLDGLTGVSQDH 192
L+ G+ + + K V + +G G L +L + G+ Q+
Sbjct: 126 LVSVGIFICTFMSAKQVTSQSSLSENDGFQAFVWWLLGIGALTF--ALLMSARMGIFQET 183
Query: 193 MRAHYQTGSNHMML--------NINLWSTLLLGMGILFT-GELWEFLSFAERYPAIIYNI 243
+ + S + ++ + +LF EL+E P + + +
Sbjct: 184 LYKRFGKHSKEALFYNHALPLPGFVFLASDIYDHAVLFNKSELYEIPVIGVTLPIMWFYL 243
Query: 244 LLFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISPMQWVGTVLV 303
L+ +T + +F+ LT +++ T RKF +++ S++ F NP + W+GT+ V
Sbjct: 244 LMNIITQYVCIRGVFILTTECASLTVTLVVTLRKFVSLIFSILYFQNPFTLWHWLGTLFV 303
Query: 304 FLG 306
F+G
Sbjct: 304 FIG 306
>gi|164607128 solute carrier family 35, member E1 [Homo sapiens]
Length = 410
Score = 42.0 bits (97), Expect = 7e-04
Identities = 43/203 (21%), Positives = 83/203 (40%), Gaps = 23/203 (11%)
Query: 117 KSCKPIPVMLLGVTLLKKKYPLAKYLCVLLIVAGVALFMYKPKKVVGIEEHTVGYGELLL 176
K+ PI V+LL ++K+K YL ++ I++GV L + E + L+
Sbjct: 142 KATMPIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLL--------ATVTELSFDMWGLVS 193
Query: 177 LLSLTL----------DGLTGVSQDHMRAHYQTGSNHMMLNINLWSTLLLGMGILFTGEL 226
L+ TL L H+R G + + I W + L ++ +
Sbjct: 194 ALAATLCFSLQNIFSKKVLRDSRIHHLRLLNILGCHAVFFMIPTWVLVDLSAFLVSSD-- 251
Query: 227 WEFLSFAERYPAIIYNILLFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVI 286
L++ ++P + + + G + F + PL+ S+ T++ I S+I
Sbjct: 252 ---LTYVYQWPWTLLLLAVSGFCNFAQNVIAFSILNLVSPLSYSVANATKRIMVITVSLI 308
Query: 287 LFANPISPMQWVGTVLVFLGLGL 309
+ NP++ +G + LG+ L
Sbjct: 309 MLRNPVTSTNVLGMMTAILGVFL 331
>gi|27881499 solute carrier family 35, member C2 isoform a [Homo
sapiens]
Length = 365
Score = 38.1 bits (87), Expect = 0.011
Identities = 51/219 (23%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 101 SNSALQFVNYPTQVLGKSCKPIPVMLLGVTLLKKKYPLAKYLCVLLIVAGVALFMYKPKK 160
SN + +V + KS + +++ + ++ A L VLLI G+ +F YK +
Sbjct: 101 SNWSFLYVTVSLYTMTKSSAVLFILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQ 160
Query: 161 VVGIEEHTVGYGELLLLLSLTLDGLTGVSQDHMRAHYQTG-SNHMMLNINLWSTLLLGMG 219
+E G L+L + + G+ + + G N + +L + LG+
Sbjct: 161 F-NVE------GFALVLGASFIGGIRWTLTQMLLQKAELGLQNPIDTMFHLQPLMFLGLF 213
Query: 220 ILFTGELWEFLSFAERYPAI--------IYNILLFGLTSALGQSFI-FMTVVYFGPLTCS 270
LF LS +E+ + L G A G F F+ V LT S
Sbjct: 214 PLFAVFEGLHLSTSEKIFRFQDTGLLLRVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLS 273
Query: 271 IITTTRKFFTILASVILFANPISPMQWVGTVLVFLGLGL 309
I ++ T+L + L + IS + W+G L G+ L
Sbjct: 274 IAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLSGISL 312
>gi|21314776 solute carrier family 35, member C2 isoform a [Homo
sapiens]
Length = 365
Score = 38.1 bits (87), Expect = 0.011
Identities = 51/219 (23%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 101 SNSALQFVNYPTQVLGKSCKPIPVMLLGVTLLKKKYPLAKYLCVLLIVAGVALFMYKPKK 160
SN + +V + KS + +++ + ++ A L VLLI G+ +F YK +
Sbjct: 101 SNWSFLYVTVSLYTMTKSSAVLFILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQ 160
Query: 161 VVGIEEHTVGYGELLLLLSLTLDGLTGVSQDHMRAHYQTG-SNHMMLNINLWSTLLLGMG 219
+E G L+L + + G+ + + G N + +L + LG+
Sbjct: 161 F-NVE------GFALVLGASFIGGIRWTLTQMLLQKAELGLQNPIDTMFHLQPLMFLGLF 213
Query: 220 ILFTGELWEFLSFAERYPAI--------IYNILLFGLTSALGQSFI-FMTVVYFGPLTCS 270
LF LS +E+ + L G A G F F+ V LT S
Sbjct: 214 PLFAVFEGLHLSTSEKIFRFQDTGLLLRVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLS 273
Query: 271 IITTTRKFFTILASVILFANPISPMQWVGTVLVFLGLGL 309
I ++ T+L + L + IS + W+G L G+ L
Sbjct: 274 IAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLSGISL 312
>gi|223671915 GDP-fucose transporter 1 isoform a [Homo sapiens]
Length = 364
Score = 37.0 bits (84), Expect = 0.024
Identities = 48/262 (18%), Positives = 100/262 (38%), Gaps = 14/262 (5%)
Query: 55 LVFIQCVINAVFAKILIQF---------FDTARVDRTRSWLYAACSISYLGAMVSSNSAL 105
+ F QC++ + K L F + R+D + S+ ++G + +N L
Sbjct: 76 VTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCL 135
Query: 106 QFVNYPTQVLGKSCKPIPVMLLGVTLLKKKYPLAKYLCVLLIVAGVALFMYKPKKVVGIE 165
++V +G+S + +LL LLK+ L +I+ G L + + G E
Sbjct: 136 KYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGFWLGVDQE----GAE 191
Query: 166 EHTVGYGELLLLLSLTLDGLTGVSQDHMRAHYQTGSNHMMLNINLWSTLLLGMGILFTGE 225
G + +L+ L + + + N+ + +L +L GE
Sbjct: 192 GTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGE 251
Query: 226 LWEFLSFAERYPAIIYNILLFGLTSALGQSFIF-MTVVYFGPLTCSIITTTRKFFTILAS 284
L FA+ A + ++ G ++ + + + PLT ++ T + + +
Sbjct: 252 LQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLA 311
Query: 285 VILFANPISPMQWVGTVLVFLG 306
V+ + S + W ++V G
Sbjct: 312 VLYYEETKSFLWWTSNMMVLGG 333
>gi|223671919 GDP-fucose transporter 1 isoform b [Homo sapiens]
Length = 351
Score = 37.0 bits (84), Expect = 0.024
Identities = 48/262 (18%), Positives = 100/262 (38%), Gaps = 14/262 (5%)
Query: 55 LVFIQCVINAVFAKILIQF---------FDTARVDRTRSWLYAACSISYLGAMVSSNSAL 105
+ F QC++ + K L F + R+D + S+ ++G + +N L
Sbjct: 63 VTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCL 122
Query: 106 QFVNYPTQVLGKSCKPIPVMLLGVTLLKKKYPLAKYLCVLLIVAGVALFMYKPKKVVGIE 165
++V +G+S + +LL LLK+ L +I+ G L + + G E
Sbjct: 123 KYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGFWLGVDQE----GAE 178
Query: 166 EHTVGYGELLLLLSLTLDGLTGVSQDHMRAHYQTGSNHMMLNINLWSTLLLGMGILFTGE 225
G + +L+ L + + + N+ + +L +L GE
Sbjct: 179 GTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGE 238
Query: 226 LWEFLSFAERYPAIIYNILLFGLTSALGQSFIF-MTVVYFGPLTCSIITTTRKFFTILAS 284
L FA+ A + ++ G ++ + + + PLT ++ T + + +
Sbjct: 239 LQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLA 298
Query: 285 VILFANPISPMQWVGTVLVFLG 306
V+ + S + W ++V G
Sbjct: 299 VLYYEETKSFLWWTSNMMVLGG 320
>gi|223671917 GDP-fucose transporter 1 isoform b [Homo sapiens]
Length = 351
Score = 37.0 bits (84), Expect = 0.024
Identities = 48/262 (18%), Positives = 100/262 (38%), Gaps = 14/262 (5%)
Query: 55 LVFIQCVINAVFAKILIQF---------FDTARVDRTRSWLYAACSISYLGAMVSSNSAL 105
+ F QC++ + K L F + R+D + S+ ++G + +N L
Sbjct: 63 VTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCL 122
Query: 106 QFVNYPTQVLGKSCKPIPVMLLGVTLLKKKYPLAKYLCVLLIVAGVALFMYKPKKVVGIE 165
++V +G+S + +LL LLK+ L +I+ G L + + G E
Sbjct: 123 KYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGFWLGVDQE----GAE 178
Query: 166 EHTVGYGELLLLLSLTLDGLTGVSQDHMRAHYQTGSNHMMLNINLWSTLLLGMGILFTGE 225
G + +L+ L + + + N+ + +L +L GE
Sbjct: 179 GTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGE 238
Query: 226 LWEFLSFAERYPAIIYNILLFGLTSALGQSFIF-MTVVYFGPLTCSIITTTRKFFTILAS 284
L FA+ A + ++ G ++ + + + PLT ++ T + + +
Sbjct: 239 LQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLA 298
Query: 285 VILFANPISPMQWVGTVLVFLG 306
V+ + S + W ++V G
Sbjct: 299 VLYYEETKSFLWWTSNMMVLGG 320
>gi|160707905 similar to solute carrier family 35, member E2 [Homo
sapiens]
Length = 405
Score = 35.4 bits (80), Expect = 0.069
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 266 PLTCSIITTTRKFFTILASVILFANPISPMQWVGTVLVFLGL 307
P+T S+ +T + +I SVI+F N I+ + VGT LV +G+
Sbjct: 323 PVTFSVASTVKHALSIWLSVIVFGNKITSLSAVGTALVTVGV 364
>gi|56699411 solute carrier family 35, member E2 [Homo sapiens]
Length = 313
Score = 32.3 bits (72), Expect = 0.58
Identities = 42/218 (19%), Positives = 88/218 (40%), Gaps = 8/218 (3%)
Query: 91 SISYLGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGVTLLKKKYPLAKYLCVLLIVAG 150
++S+ G +V +N +LQ T L K+ ++ + +K + L ++ I G
Sbjct: 81 ALSFCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIAIQTFCYQKTFSTRIQLTLIPITLG 140
Query: 151 VALFMYKPKKVVGIEEHTVGYGELLLLLSLTLDGLTGVSQDHMRAHYQTGSNHMMLNINL 210
V L Y K + G + L + + L V + Q S ++
Sbjct: 141 VILNSYYDVKFNFL-------GMVFAALGVLVTSLYQVWVGAKQHELQVNSMQLLYYQAP 193
Query: 211 WSTLLLGMGILFTGELW-EFLSFAERYPAIIYNILLFGLTSALGQSFIFMTVVYFGPLTC 269
S+ +L + + F ++ E F + + +LL G+ + + I+ + P+T
Sbjct: 194 MSSAMLLVAVPFFEPVFGEGGIFGPWSVSALLMVLLSGVIAFMVNLSIYWIIGNTSPVTY 253
Query: 270 SIITTTRKFFTILASVILFANPISPMQWVGTVLVFLGL 307
++ + T+ +LF +P+S Q +G + G+
Sbjct: 254 NMFGHFKFCITLFGGYVLFKDPLSINQALGILCTLFGI 291
>gi|56912198 solute carrier family 35, member D3 [Homo sapiens]
Length = 416
Score = 32.0 bits (71), Expect = 0.76
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 104 ALQFVNYPTQVLGKSCKPIPVMLLGVTLLKKKYPLAKYL-CVLLIVAGVAL 153
+L+ ++ P V+ K C P+ ML+GV +LK P L VL+ G AL
Sbjct: 95 SLRGLSLPMYVVFKRCLPLVTMLIGVLVLKNGAPSPGVLAAVLITTCGAAL 145
>gi|5453621 solute carrier family 35 (CMP-sialic acid transporter),
member A1 [Homo sapiens]
Length = 337
Score = 31.6 bits (70), Expect = 0.99
Identities = 39/188 (20%), Positives = 80/188 (42%), Gaps = 9/188 (4%)
Query: 126 LLGVTLLKKKYPLAKYLCVLLIVAGVALFMYKP---KKVVGIEEHTVGYGELLLLLSLTL 182
L V +L + +++ V ++ AGV L +KP KVV + +G+G + +++
Sbjct: 130 LCTVLMLNRTLSKLQWVSVFMLCAGVTLVQWKPAQATKVVVEQNPLLGFG--AIAIAVLC 187
Query: 183 DGLTGVSQDHMRAHYQTGSNHMMLNINLWSTLLLGMGI-LFTGELWEFLSFAERYPAIIY 241
G GV + + T + + L ++ G+ L G + F Y ++
Sbjct: 188 SGFAGVYFEKVLKSSDTSLWVRNIQMYLSGIIVTLAGVYLSDGAEIKEKGFFYGYTYYVW 247
Query: 242 NILLFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISPMQWVGTV 301
++ +++G + + V Y + + +ASV+LF I+ +GT+
Sbjct: 248 FVIFL---ASVGGLYTSVVVKYTDNIMKGFSAAAAIVLSTIASVMLFGLQITLTFALGTL 304
Query: 302 LVFLGLGL 309
LV + + L
Sbjct: 305 LVCVSIYL 312
>gi|30581137 phosphatidylinositol glycan anchor biosynthesis, class
Z [Homo sapiens]
Length = 579
Score = 31.2 bits (69), Expect = 1.3
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 227 WEFLSFAERYPAIIYNILLFGLTSALGQSFIFMTVVYFGPLTCSIITT---TRKFFTILA 283
W+ L + A + + G S L ++ ++YF PL + R +L
Sbjct: 338 WQRLQVGLQASAQMGLLRALGARSLLSSPRSYLLLLYFMPLALLSAFSHQEARFLIPLLV 397
Query: 284 SVILFANP-ISPMQWVGTVLVFLGLG 308
++L +P P+ W GTV++F LG
Sbjct: 398 PLVLLCSPQTQPVPWKGTVVLFNALG 423
>gi|155969705 chloride channel Kb [Homo sapiens]
Length = 687
Score = 30.8 bits (68), Expect = 1.7
Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 237 PAIIYNILLFGLTSALGQSFIFMTVVYFG-----PLTCSIITTTRKFFTILASVIL 287
P I + + L GL LG +++F ++FG + ++ T++ ++ LA+++L
Sbjct: 280 PEIFFFVALGGLCGILGSAYLFCQRIFFGFIRNNRFSSKLLATSKPVYSALATLVL 335
>gi|49533617 sterol O-acyltransferase 1 [Homo sapiens]
Length = 550
Score = 30.4 bits (67), Expect = 2.2
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 18 FLGVFVCYFYYGILQEKITRGKYGEGAKQETFTFALTLVFIQCVINAVFAKILIQF 73
F VF C+FY + E++ + KQE F+ V + CV N++ +LI F
Sbjct: 327 FAQVFGCFFYVYYIFERLCAPLF-RNIKQEPFS---ARVLVLCVFNSILPGVLILF 378
>gi|27881496 solute carrier family 35, member C2 isoform b [Homo
sapiens]
Length = 344
Score = 29.6 bits (65), Expect = 3.8
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 244 LLFGLTSALGQSFI-FMTVVYFGPLTCSIITTTRKFFTILASVILFANPISPMQWVGTVL 302
L G A G F F+ V LT SI ++ T+L + L + IS + W+G L
Sbjct: 225 LFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFAL 284
Query: 303 VFLGLGL 309
G+ L
Sbjct: 285 CLSGISL 291
>gi|150421681 ATPase, class VI, type 11A isoform b [Homo sapiens]
Length = 1191
Score = 28.5 bits (62), Expect = 8.4
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 196 HYQTGSNHMMLNINLWSTLLLGM--GILFTGELWEFLSFAERYPAII 240
HY T NH ++ W +LL + +L+ G +W FL++ Y I
Sbjct: 1025 HYWTWINHFVI----WGSLLFYVVFSLLWGGVIWPFLNYQRMYYVFI 1067
>gi|150421684 ATPase, class VI, type 11A isoform a [Homo sapiens]
Length = 1134
Score = 28.5 bits (62), Expect = 8.4
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 196 HYQTGSNHMMLNINLWSTLLLGM--GILFTGELWEFLSFAERYPAII 240
HY T NH ++ W +LL + +L+ G +W FL++ Y I
Sbjct: 1025 HYWTWINHFVI----WGSLLFYVVFSLLWGGVIWPFLNYQRMYYVFI 1067
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.328 0.142 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,758,453
Number of Sequences: 37866
Number of extensions: 426094
Number of successful extensions: 1099
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1071
Number of HSP's gapped (non-prelim): 24
length of query: 322
length of database: 18,247,518
effective HSP length: 102
effective length of query: 220
effective length of database: 14,385,186
effective search space: 3164740920
effective search space used: 3164740920
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.