Guide to the Human Genome
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Name: SLC35B4 Sequence: fasta or formatted (331aa) NCBI GI: 14249528
Description:

solute carrier family 35, member B4

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         23           1
 C cysteine            1.8          6           2
 D aspartate           1.5          5           1
 E glutamate           3.3         11           1
 F phenylalanine       9.1         30           2
 G glycine             6.0         20           1
 H histidine           1.8          6           1
 I isoleucine          9.1         30           3
 K lysine              4.5         15           2
 L leucine            12.7         42           2
 M methionine          3.6         12           1
 N asparagine          4.5         15           2
 P proline             3.6         12           2
 Q glutamine           2.4          8           1
 R arginine            3.0         10           1
 S serine              6.3         21           2
 T threonine           6.3         21           2
 V valine              7.6         25           2
 W tryptophan          1.8          6           2
 Y tyrosine            3.9         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 35, member B4 
SLC35B1               0.067   solute carrier family 35, member B1 
SLC35B3               0.066   solute carrier family 35, member B3 
SLC35B3               0.066   solute carrier family 35, member B3 
SLC35B3               0.066   solute carrier family 35, member B3 
SLC35C2               0.019   solute carrier family 35, member C2 isoform a 
SLC35C2               0.019   solute carrier family 35, member C2 isoform a 
SLC35B2               0.017   solute carrier family 35, member B2 
SLC35A1               0.016   solute carrier family 35 (CMP-sialic acid transporter...
LOC728661             0.016   similar to solute carrier family 35, member E2 [Hom...
SLC35E4               0.016   solute carrier family 35, member E4 
SLC35D1               0.013   solute carrier family 35 (UDP-glucuronic acid/UDP-N-...
SLC35D2               0.013   solute carrier family 35, member D2 
SLC35C1               0.013   GDP-fucose transporter 1 isoform a 
SLC35C1               0.013   GDP-fucose transporter 1 isoform b 
SLC35C1               0.013   GDP-fucose transporter 1 isoform b 
CD9                   0.011   CD9 antigen 
SLC5A12               0.008   solute carrier family 5 (sodium/glucose cotransport...
OR8A1                 0.008   olfactory receptor, family 8, subfamily A, member 1 ...
BZRPL1                0.008   benzodiazapine receptor (peripheral)-like 1 
BZRPL1                0.008   benzodiazapine receptor (peripheral)-like 1 
ATP2B4                0.006   plasma membrane calcium ATPase 4 isoform 4a 
ATP2B4                0.006   plasma membrane calcium ATPase 4 isoform 4b 
ATP1B1                0.005   Na+/K+ -ATPase beta 1 subunit isoform b 
ATP1B1                0.005   Na+/K+ -ATPase beta 1 subunit isoform a 
TMEM22                0.005   transmembrane protein 22 
TMEM22                0.005   transmembrane protein 22 
TMEM22                0.005   transmembrane protein 22 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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