Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: SERPINI1 Sequence: fasta or formatted (410aa) NCBI GI: 170295807
Description:

neuroserpin precursor

Referenced in:

Neurons
Protease Inhibitors

Other entries for this name:
alt mRNA [410aa] neuroserpin precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         31           3
 C cysteine            0.0          0           0
 D aspartate           4.1         17           2
 E glutamate           9.3         38           2
 F phenylalanine       6.8         28           3
 G glycine             5.6         23           2
 H histidine           1.7          7           1
 I isoleucine          5.4         22           1
 K lysine              5.4         22           2
 L leucine             9.3         38           2
 M methionine          4.9         20           2
 N asparagine          6.6         27           2
 P proline             2.9         12           1
 Q glutamine           4.1         17           2
 R arginine            3.2         13           2
 S serine              7.1         29           1
 T threonine           4.4         18           1
 V valine              7.6         31           1
 W tryptophan          0.7          3           1
 Y tyrosine            3.4         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   neuroserpin precursor 
SERPINI1              1.000   neuroserpin precursor 
SERPINI2              0.372   serpin peptidase inhibitor, clade I (pancpin), member...
SERPINE2              0.272   plasminogen activator inhibitor type 1, member 2 is...
SERPINE2              0.272   plasminogen activator inhibitor type 1, member 2 is...
SERPINE2              0.272   plasminogen activator inhibitor type 1, member 2 is...
SERPINE2              0.267   plasminogen activator inhibitor type 1, member 2 iso...
SERPINE1              0.261   plasminogen activator inhibitor-1 
SERPINB6              0.253   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB3              0.253   serine (or cysteine) proteinase inhibitor, clade B (o...
SERPINB11             0.248   serpin peptidase inhibitor, clade B, member 11 [Hom...
SERPINB8              0.247   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB8              0.247   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINC1              0.246   serpin peptidase inhibitor, clade C, member 1 
SERPINB4              0.240   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB1              0.239   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB9              0.221   serpin peptidase inhibitor, clade B, member 9 
SERPINB2              0.217   serine (or cysteine) proteinase inhibitor, clade B ...
SERPINB2              0.217   serine (or cysteine) proteinase inhibitor, clade B (o...
SERPINA9              0.215   serine (or cysteine) proteinase inhibitor, clade A ...
SERPINB12             0.215   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB7              0.208   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB7              0.208   serine (or cysteine) proteinase inhibitor, clade B (o...
SERPINB13             0.208   serine (or cysteine) proteinase inhibitor, clade B (o...
SERPINB10             0.207   serine (or cysteine) proteinase inhibitor, clade B (o...
SERPINE3              0.198   nexin-related serine protease inhibitor 
SERPINA5              0.197   serine (or cysteine) proteinase inhibitor, clade A ...
SERPIND1              0.194   heparin cofactor II precursor 
SERPINA1              0.194   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              0.194   serine proteinase inhibitor, clade A, member 1 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press