Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: DNAJA3 Sequence: fasta or formatted (480aa) NCBI GI: 205360838
Description:

DnaJ (Hsp40) homolog, subfamily A, member 3 isoform 1

Referenced in:

Heat-Shock Proteins and Chaperonins

Other entries for this name:
alt prot [453aa] DnaJ (Hsp40) homolog, subfamily A, member 3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         34           2
 C cysteine            2.3         11           1
 D aspartate           4.4         21           2
 E glutamate           5.4         26           2
 F phenylalanine       4.4         21           1
 G glycine            10.4         50           2
 H histidine           1.9          9           1
 I isoleucine          5.2         25           3
 K lysine              6.9         33           2
 L leucine             5.6         27           2
 M methionine          2.1         10           1
 N asparagine          2.5         12           1
 P proline             5.6         27           2
 Q glutamine           4.4         21           2
 R arginine            6.7         32           2
 S serine              8.3         40           4
 T threonine           6.7         32           1
 V valine              6.2         30           3
 W tryptophan          0.6          3           1
 Y tyrosine            3.3         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform... 
DNAJA3                0.935   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJA2                0.117   DnaJ subfamily A member 2 
DNAJA1                0.106   DnaJ (Hsp40) homolog, subfamily A, member 1 
DNAJA4                0.102   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJA4                0.102   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJB11               0.099   DnaJ (Hsp40) homolog, subfamily B, member 11 precurso...
DNAJB5                0.098   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.098   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.097   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform ...
DNAJB1                0.083   DnaJ (Hsp40) homolog, subfamily B, member 1 
DNAJB6                0.081   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform ...
DNAJB6                0.081   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b...
DNAJB7                0.072   DnaJ (Hsp40) homolog, subfamily B, member 7 
DNAJB9                0.072   DnaJ (Hsp40) homolog, subfamily B, member 9 
DNAJB3                0.072   DnaJ (Hsp40) homolog, subfamily B, member 3 
DNAJB2                0.069   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB2                0.069   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB4                0.068   DnaJ (Hsp40) homolog, subfamily B, member 4 
DNAJC16               0.067   DnaJ (Hsp40) homolog, subfamily C, member 16 
DNAJB8                0.066   DnaJ homolog, subfamily B, member 8 
DNAJB12               0.063   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJB12               0.063   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJB13               0.059   testis spermatogenesis apoptosis-related protein 6 [...
DNAJA4                0.059   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJC10               0.057   DnaJ (Hsp40) homolog, subfamily C, member 10 
DNAJC5                0.057   DnaJ (Hsp40) homolog, subfamily C, member 5 
DNAJC5B               0.057   DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Ho...
DNAJC18               0.055   DnaJ (Hsp40) homolog, subfamily C, member 18 
DNAJB14               0.049   DnaJ (Hsp40) homolog, subfamily B, member 14 isoform...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press