Guide to the Human Genome
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Name: SLC37A1 Sequence: fasta or formatted (533aa) NCBI GI: 49619231
Description:

solute carrier family 37 member 1

Referenced in:

Lipid Metabolism
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         44           2
 C cysteine            2.3         12           1
 D aspartate           3.6         19           1
 E glutamate           2.6         14           1
 F phenylalanine       5.8         31           1
 G glycine            10.5         56           2
 H histidine           2.4         13           1
 I isoleucine          6.6         35           2
 K lysine              4.1         22           2
 L leucine            13.5         72           3
 M methionine          2.1         11           1
 N asparagine          3.2         17           2
 P proline             3.9         21           1
 Q glutamine           2.3         12           2
 R arginine            3.2         17           2
 S serine              8.4         45           2
 T threonine           5.8         31           2
 V valine              6.0         32           2
 W tryptophan          1.9         10           1
 Y tyrosine            3.6         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 37 member 1 
SLC37A2               0.548   solute carrier family 37 (glycerol-3-phosphate tran...
SLC37A2               0.548   solute carrier family 37 (glycerol-3-phosphate trans...
SLC37A3               0.240   solute carrier family 37 (glycerol-3-phosphate trans...
SLC37A3               0.150   solute carrier family 37 (glycerol-3-phosphate trans...
SLC37A4               0.047   solute carrier family 37 (glucose-6-phosphate transpo...
SLC17A5               0.028   sialin 
SLC17A3               0.023   solute carrier family 17 (sodium phosphate), member...
SLC17A1               0.016   solute carrier family 17 (sodium phosphate), member...
C6orf192              0.013   hypothetical protein LOC116843 
SLC17A3               0.012   solute carrier family 17 (sodium phosphate), member...
SLC17A4               0.010   solute carrier family 17 (sodium phosphate), member 4...
MFSD10                0.009   major facilitator superfamily domain containing 10 ...
MFSD10                0.009   major facilitator superfamily domain containing 10 ...
SPNS2                 0.008   spinster homolog 2 
SSH2                  0.007   slingshot 2 
SLC2A11               0.006   glucose transporter protein 10 isoform a 
SLC2A11               0.006   glucose transporter protein 10 isoform c 
SLC2A11               0.006   glucose transporter protein 10 isoform b 
MFSD9                 0.006   major facilitator superfamily domain containing 9 [...
SPEN                  0.006   spen homolog, transcriptional regulator 
ATP5G3                0.006   ATP synthase, H+ transporting, mitochondrial F0 compl...
ATP5G3                0.006   ATP synthase, H+ transporting, mitochondrial F0 comp...
SLC16A14              0.006   solute carrier family 16 (monocarboxylic acid transp...
FUSSEL18              0.005   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.005   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.005   PREDICTED: functional smad suppressing element 18 [...
GPR137C               0.005   G protein-coupled receptor 137C 
SLC16A13              0.005   monocarboxylate transporter 13 
FAM38A                0.005   family with sequence similarity 38, member A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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