Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 49472841
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|49472841 A kinase (PRKA) anchor protein 8-like [Homo
sapiens]
(646 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|49472841 A kinase (PRKA) anchor protein 8-like [Homo sapiens] 1335 0.0
gi|5031579 A-kinase anchor protein 8 [Homo sapiens] 299 6e-81
gi|33946297 zinc finger protein 326 isoform 1 [Homo sapiens] 172 9e-43
gi|32880208 diaphanous homolog 3 isoform b [Homo sapiens] 52 1e-06
gi|110225351 diaphanous homolog 3 isoform a [Homo sapiens] 52 1e-06
gi|13540523 nucleosomal binding protein 1 [Homo sapiens] 50 5e-06
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 49 1e-05
gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens] 49 2e-05
gi|6382071 diaphanous 2 isoform 12C [Homo sapiens] 48 2e-05
gi|5803003 diaphanous 2 isoform 156 [Homo sapiens] 48 2e-05
gi|24850117 misshapen/NIK-related kinase isoform 2 [Homo sapiens] 48 3e-05
gi|27436917 misshapen/NIK-related kinase isoform 3 [Homo sapiens] 48 3e-05
gi|7657335 misshapen/NIK-related kinase isoform 1 [Homo sapiens] 48 3e-05
gi|60498973 myelin transcription factor 1-like [Homo sapiens] 47 4e-05
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 47 5e-05
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 47 5e-05
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 46 1e-04
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 46 1e-04
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 45 2e-04
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 45 2e-04
gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof... 45 2e-04
gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens] 44 4e-04
gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens] 44 4e-04
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 44 4e-04
gi|83716024 kinesin family member 21B [Homo sapiens] 44 4e-04
gi|23503317 coiled-coil domain containing 96 [Homo sapiens] 44 4e-04
gi|39812378 RAN binding protein 9 [Homo sapiens] 44 5e-04
gi|21361639 DIPB protein [Homo sapiens] 44 5e-04
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 44 5e-04
gi|7706687 Enah/Vasp-like [Homo sapiens] 44 5e-04
>gi|49472841 A kinase (PRKA) anchor protein 8-like [Homo sapiens]
Length = 646
Score = 1335 bits (3454), Expect = 0.0
Identities = 646/646 (100%), Positives = 646/646 (100%)
Query: 1 MSYTGFVQGSETTLQSTYSDTSAQPTCDYGYGTWNSGTNRGYEGYGYGYGYGQDNTTNYG 60
MSYTGFVQGSETTLQSTYSDTSAQPTCDYGYGTWNSGTNRGYEGYGYGYGYGQDNTTNYG
Sbjct: 1 MSYTGFVQGSETTLQSTYSDTSAQPTCDYGYGTWNSGTNRGYEGYGYGYGYGQDNTTNYG 60
Query: 61 YGMATSHSWEMPSSDTNANTSASGSASADSVLSRINQRLDMVPHLETDMMQGGVYGSGGE 120
YGMATSHSWEMPSSDTNANTSASGSASADSVLSRINQRLDMVPHLETDMMQGGVYGSGGE
Sbjct: 61 YGMATSHSWEMPSSDTNANTSASGSASADSVLSRINQRLDMVPHLETDMMQGGVYGSGGE 120
Query: 121 RYDSYESCDSRAVLSERDLYRSGYDYSELDPEMEMAYEGQYDAYRDQFRMRGNDTFGPRA 180
RYDSYESCDSRAVLSERDLYRSGYDYSELDPEMEMAYEGQYDAYRDQFRMRGNDTFGPRA
Sbjct: 121 RYDSYESCDSRAVLSERDLYRSGYDYSELDPEMEMAYEGQYDAYRDQFRMRGNDTFGPRA 180
Query: 181 QGWARDARSGRPMASGYGRMWEDPMGARGQCMSGASRLPSLFSQNIIPEYGMFQGMRGGG 240
QGWARDARSGRPMASGYGRMWEDPMGARGQCMSGASRLPSLFSQNIIPEYGMFQGMRGGG
Sbjct: 181 QGWARDARSGRPMASGYGRMWEDPMGARGQCMSGASRLPSLFSQNIIPEYGMFQGMRGGG 240
Query: 241 AFPGGSRFGFGFGNGMKQMRRTWKTWTTADFRTKKKKRKQGGSPDEPDSKATRTDCSDNS 300
AFPGGSRFGFGFGNGMKQMRRTWKTWTTADFRTKKKKRKQGGSPDEPDSKATRTDCSDNS
Sbjct: 241 AFPGGSRFGFGFGNGMKQMRRTWKTWTTADFRTKKKKRKQGGSPDEPDSKATRTDCSDNS 300
Query: 301 DSDNDEGTEGEATEGLEGTEAVEKGSRVDGEDEEGKEDGREEGKEDPEKGALTTQDENGQ 360
DSDNDEGTEGEATEGLEGTEAVEKGSRVDGEDEEGKEDGREEGKEDPEKGALTTQDENGQ
Sbjct: 301 DSDNDEGTEGEATEGLEGTEAVEKGSRVDGEDEEGKEDGREEGKEDPEKGALTTQDENGQ 360
Query: 361 TKRKLQAGKKSQDKQKKRQRDRMVERIQFVCSLCKYRTFYEDEMASHLDSKFHKEHFKYV 420
TKRKLQAGKKSQDKQKKRQRDRMVERIQFVCSLCKYRTFYEDEMASHLDSKFHKEHFKYV
Sbjct: 361 TKRKLQAGKKSQDKQKKRQRDRMVERIQFVCSLCKYRTFYEDEMASHLDSKFHKEHFKYV 420
Query: 421 GTKLPKQTADFLQEYVTNKTKKTEELRKTVEDLDGLIHQIYRDQDLTQEIAMEHFVKKVE 480
GTKLPKQTADFLQEYVTNKTKKTEELRKTVEDLDGLIHQIYRDQDLTQEIAMEHFVKKVE
Sbjct: 421 GTKLPKQTADFLQEYVTNKTKKTEELRKTVEDLDGLIHQIYRDQDLTQEIAMEHFVKKVE 480
Query: 481 AAHCAACDLFIPMQFGIIQKHLKTMDHNRNRRLMMEQSKKSSLMVARSILNNKLISKKLE 540
AAHCAACDLFIPMQFGIIQKHLKTMDHNRNRRLMMEQSKKSSLMVARSILNNKLISKKLE
Sbjct: 481 AAHCAACDLFIPMQFGIIQKHLKTMDHNRNRRLMMEQSKKSSLMVARSILNNKLISKKLE 540
Query: 541 RYLKGENPFTDSPEEEKEQEEAEGGALDEGAQGEAAGISEGAEGVPAQPPVPPEPAPGAV 600
RYLKGENPFTDSPEEEKEQEEAEGGALDEGAQGEAAGISEGAEGVPAQPPVPPEPAPGAV
Sbjct: 541 RYLKGENPFTDSPEEEKEQEEAEGGALDEGAQGEAAGISEGAEGVPAQPPVPPEPAPGAV 600
Query: 601 SPPPPPPPEEEEEGAVPLLGGALQRQIRGIPGLDVEDDEEGGGGAP 646
SPPPPPPPEEEEEGAVPLLGGALQRQIRGIPGLDVEDDEEGGGGAP
Sbjct: 601 SPPPPPPPEEEEEGAVPLLGGALQRQIRGIPGLDVEDDEEGGGGAP 646
>gi|5031579 A-kinase anchor protein 8 [Homo sapiens]
Length = 692
Score = 299 bits (765), Expect = 6e-81
Identities = 238/693 (34%), Positives = 341/693 (49%), Gaps = 126/693 (18%)
Query: 30 GYGTWNSGTN-------------RGYEGYGYGYGYGQDNTT-----NYGYGMATSHSWEM 71
GYG W++G +GYE Y Y YG NT+ Y YG A SWE
Sbjct: 7 GYGAWSAGPANTQGAYGTGVASWQGYENYNY---YGAQNTSVTTGATYSYGPA---SWEA 60
Query: 72 PSSDTN---ANTSASGSAS---------ADSVLSRINQRLDMVPHLETDMMQGGVYGSGG 119
++ A A AS +DS++++INQRLDM+ +GG GSGG
Sbjct: 61 AKANDGGLAAGAPAMHMASYGPEPCTDNSDSLIAKINQRLDMMSK------EGGRGGSGG 114
Query: 120 E-----------RYDSYESCDSRAVLSERDLYRSGYDYS---ELDPEMEMAYEGQYDAYR 165
R+ +ES DSR L E + YR Y Y +L + ++ GQY R
Sbjct: 115 GGEGIQDRESSFRFQPFESYDSRPCLPEHNPYRPSYSYDYEFDLGSDRNGSFGGQYSECR 174
Query: 166 DQFRMRGN-DTF-GPRAQGWARD----------------ARSGRPMASGYGRMWEDPMGA 207
D R RG+ D F R QG +D A S P+++ + + + +G
Sbjct: 175 DPARERGSLDGFMRGRGQGRFQDRSNPGTFMRSDPFVPPAASSEPLSTPWNEL--NYVGG 232
Query: 208 RGQCMSGASRLP-SLFSQNIIPEYGMFQGMRGGGAFPGGSRFGFGFGNGMKQMRRTWKTW 266
RG SR P SLFSQ++ P+YG+ GM+G G + S +G G +MR +
Sbjct: 233 RGLGGPSPSRPPPSLFSQSMAPDYGVM-GMQGAGGYD--STMPYGCGRSQPRMRDRDRPK 289
Query: 267 TTADFRTKK----KKRKQGGSPDEPDSKATRTDCSDNSDSDNDEGTEGEATEGLEGTEAV 322
R +KRKQ +EPD+K R D S+ S+ND+ G+ G E
Sbjct: 290 RRGFDRFGPDGTGRKRKQFQLYEEPDTKLARVD-SEGDFSENDDAA-GDFRSGDE----- 342
Query: 323 EKGSRVDGEDEEGKEDGREEGKEDPEKGALTTQDENGQTKRKLQAGKKSQDKQKKRQRDR 382
GEDE + GR+ G+++ E DE+ + +R+ Q +++ R RDR
Sbjct: 343 ----EFKGEDELC-DSGRQRGEKEDE-------DEDVKKRREKQ-------RRRDRTRDR 383
Query: 383 MVERIQFVCSLCKYRTFYEDEMASHLDSKFHKEHFKYVGTKLPKQTADFLQEYVTNKTKK 442
+RIQF CS+CK+R+F ++E+ HL SKFHKE +++ TKLP +T +FLQEY+ N+ KK
Sbjct: 384 AADRIQFACSVCKFRSFDDEEIQKHLQSKFHKETLRFISTKLPDKTVEFLQEYIVNRNKK 443
Query: 443 TEELRKTVEDLDGLIHQIYRDQDLTQEIAMEHFVKKVEAAHCAACDLFIPMQFGIIQKHL 502
E+ R+ + + + + D + I EHF KK+EAAHC ACD+ IP Q ++Q+HL
Sbjct: 444 IEKRRQELMEKETAKPK----PDPFKGIGQEHFFKKIEAAHCLACDMLIPAQPQLLQRHL 499
Query: 503 KTMDHNRNRRLMMEQSKKSSLMVARSILNNKLISKKLERYLKGENPFT-DSPEEEKEQEE 561
++DHN NRRL EQ KK+SL VA+S+LNN+ I K LE+YLKGE+PFT ++ + E E ++
Sbjct: 500 HSVDHNHNRRLAAEQFKKTSLHVAKSVLNNRHIVKMLEKYLKGEDPFTSETVDPEMEGDD 559
Query: 562 AEGGALDEGAQGEAAGISEGAEGVPAQPPVPPEPAPGAVSPPPPP----PPEEEEEGAVP 617
GG + E A A V E AP S P P + E G+ P
Sbjct: 560 NLGGEDKKETPEEVAADVLAEVITAAVRAVDGEGAPAPESSGEPAEDEGPTDTAEAGSDP 619
Query: 618 LLGGALQRQI-------RGIPGLDVEDDEEGGG 643
L+ Q+ +G+P E E G G
Sbjct: 620 QAEQLLEEQVPCGTAHEKGVPKARSEAAEAGNG 652
>gi|33946297 zinc finger protein 326 isoform 1 [Homo sapiens]
Length = 582
Score = 172 bits (436), Expect = 9e-43
Identities = 164/602 (27%), Positives = 253/602 (42%), Gaps = 144/602 (23%)
Query: 38 TNRGYEGYGYGYGYGQDNTTNYGYGMATSHSWEMPSSDTNANTSASGSASADSVLSRINQ 97
T +G+ G YG G + YG + S G S DS L NQ
Sbjct: 15 TYQGFNGMDRDYGPGSYGGMDRDYG----------------HGSYGGQRSMDSYL---NQ 55
Query: 98 RLDMVPHLETDMMQGGVYGSGGERYDSYESCDSRAVLSERDLYRSGYDYSELDPEMEMAY 157
M H G GG R+ YES DSR+ L RDLYRSGY ++E PE + +
Sbjct: 56 SYGMDNHSG---------GGGGSRFGPYESYDSRSSLGGRDLYRSGYGFNE--PE-QSRF 103
Query: 158 EGQYDAYRDQFRMRGNDTFGPRAQG---W-ARDARS----------GRPMASGYG----- 198
G Y + D+FG R QG W A +RS GR S Y
Sbjct: 104 GGSYGGRFESSYRNSLDSFGGRNQGGSSWEAPYSRSKLRPGFMEDRGRENYSSYSSFSSP 163
Query: 199 RMWEDPMGARGQCMSGASRLP-SLFSQNIIPEYGMFQGMRGGGAFPGGSRFGFGFGNG-M 256
M P+G+RG+ G P S F G R AF GG G G G G M
Sbjct: 164 HMKPAPVGSRGR---GTPAYPESTF------------GSRNYDAF-GGPSTGRGRGRGHM 207
Query: 257 KQMRRTWKTWTTADFRTKKK----------KRKQGGSPDEPDSKATRTDCSDNSDSDNDE 306
+ D++ K KRK ++P +
Sbjct: 208 GDFGSIHRPGIVVDYQNKSTNVTVAAARGIKRKMMQPFNKPSGTFIK------------- 254
Query: 307 GTEGEATEGLEGTEAVEKGSRVDGEDEEGKEDGREEGKEDPEKGALTTQDENGQTKRKLQ 366
+ + + +E + ++ D ++EE + KR+++
Sbjct: 255 --KPKLAKPMEKISLSKSPTKTDPKNEE-------------------------EEKRRIE 287
Query: 367 AGKKSQDKQKKRQRDRMVE--RIQFVCSLCKYRTFYEDEMASHLDSKFHKEHFKYV--GT 422
A ++ Q +++++ ++ + R+ F CS CK+RTF E ++ HL+S H+E ++ T
Sbjct: 288 ARREKQRRRREKNSEKYGDGYRMAFTCSFCKFRTFEEKDIELHLESSSHQETLDHIQKQT 347
Query: 423 KLPKQTADFLQEYVTNKTKKTEELRKTVEDLDGLIHQIYRDQDLTQEIAMEHFVKKVEAA 482
K K +FL E + NK KKT ++ + ++ I ++D+ + + ++ + KVE
Sbjct: 348 KFDKVVMEFLHECMVNKFKKTSIRKQQTNNQTEVVKII--EKDVMEGVTVDDHMMKVETV 405
Query: 483 HCAACDLFIPMQFGIIQKHLKTMDHNRNRRLMMEQSKKSSLMVARSILNNKLISKKLERY 542
HC+AC ++IP +Q+HLK+ DH + ++ EQ K+ S++ A SILNN ++ + ER+
Sbjct: 406 HCSACSVYIPALHSSVQQHLKSPDHIKGKQAYKEQIKRESVLTATSILNNPIVKARYERF 465
Query: 543 LKGENPF--------------------TDSPEEEKEQEEAEGGALDEGAQGEAAGISEGA 582
+KGENPF D P EE+E E+ E A + G E + E
Sbjct: 466 VKGENPFEIQDHSQDQQIEGDEEDEEKIDEPIEEEEDEDEEEEAEEVGEVEEVEEVEEVR 525
Query: 583 EG 584
EG
Sbjct: 526 EG 527
>gi|32880208 diaphanous homolog 3 isoform b [Homo sapiens]
Length = 849
Score = 52.4 bits (124), Expect = 1e-06
Identities = 49/208 (23%), Positives = 81/208 (38%), Gaps = 32/208 (15%)
Query: 432 LQEYVTNKTKKTEELRKTVEDLDGLIHQIYRDQDLTQEIAME-----HFVKKVEAAHCAA 486
L+ + +K + EL +ED+ + + Y ++ E +F+ ++
Sbjct: 126 LKVFDEHKEEDLFELSHRLEDIRAELDEAYDVYNMVWSTVKETRAEGYFISILQHLLLIR 185
Query: 487 CDLFIPMQFG----------IIQKHLKTMDHNRNRRLMMEQSKKSSLMVARSILNNKLIS 536
D FI Q+ ++ + D +RL ++ ++ + + ++ L +
Sbjct: 186 NDYFIRQQYFKLIDECVSQIVLHRDGMDPDFTYRKRLDLDLTQFVDICIDQAKLE-EFEE 244
Query: 537 KKLERYLKGENPFTDSPEEEKEQEEAEG----------------GALDEGAQGEAAGISE 580
K E Y K E FTD E + E ++ E GAL E
Sbjct: 245 KASELYKKFEKEFTDHQETQAELQKKEAKINELQAELQAFKSQFGALPADCNIPLPPSKE 304
Query: 581 GAEGVPAQPPVPPEPAPGAVSPPPPPPP 608
G G A PP PP P+ G V PPPPPPP
Sbjct: 305 GGTGHSALPPPPPLPSGGGVPPPPPPPP 332
>gi|110225351 diaphanous homolog 3 isoform a [Homo sapiens]
Length = 1193
Score = 52.4 bits (124), Expect = 1e-06
Identities = 49/208 (23%), Positives = 81/208 (38%), Gaps = 32/208 (15%)
Query: 432 LQEYVTNKTKKTEELRKTVEDLDGLIHQIYRDQDLTQEIAME-----HFVKKVEAAHCAA 486
L+ + +K + EL +ED+ + + Y ++ E +F+ ++
Sbjct: 389 LKVFDEHKEEDLFELSHRLEDIRAELDEAYDVYNMVWSTVKETRAEGYFISILQHLLLIR 448
Query: 487 CDLFIPMQFG----------IIQKHLKTMDHNRNRRLMMEQSKKSSLMVARSILNNKLIS 536
D FI Q+ ++ + D +RL ++ ++ + + ++ L +
Sbjct: 449 NDYFIRQQYFKLIDECVSQIVLHRDGMDPDFTYRKRLDLDLTQFVDICIDQAKLE-EFEE 507
Query: 537 KKLERYLKGENPFTDSPEEEKEQEEAEG----------------GALDEGAQGEAAGISE 580
K E Y K E FTD E + E ++ E GAL E
Sbjct: 508 KASELYKKFEKEFTDHQETQAELQKKEAKINELQAELQAFKSQFGALPADCNIPLPPSKE 567
Query: 581 GAEGVPAQPPVPPEPAPGAVSPPPPPPP 608
G G A PP PP P+ G V PPPPPPP
Sbjct: 568 GGTGHSALPPPPPLPSGGGVPPPPPPPP 595
>gi|13540523 nucleosomal binding protein 1 [Homo sapiens]
Length = 282
Score = 50.4 bits (119), Expect = 5e-06
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 7/116 (6%)
Query: 277 KRKQGGSPDEPDSKATRTDCSDNSDSDNDEGTEGEATEGLEGTEAVEKGSRVDGEDEEGK 336
K K+ G E D K D + + + +E E +G E + EKG + +G+D + K
Sbjct: 171 KEKEDGKKGE-DGKGNGEDGKEKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVK 229
Query: 337 ED--GREEGKEDPEKGALTTQDENGQTKRKLQAGKKSQDKQKKRQRDRMVERIQFV 390
ED RE+GKED E G ++E G+ K L+ ++ +++ + ++ D E Q +
Sbjct: 230 EDEKEREDGKED-EGG---NEEEAGKEKEDLKEEEEGKEEDEIKEDDGKKEEPQSI 281
Score = 41.6 bits (96), Expect = 0.002
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 298 DNSDSDNDEGTEGEATEGLEGTE--AVEKGSRVDGEDEEGKEDGR--EEGKEDPEKGALT 353
D D + ++G G+ + +G E +K GED + KEDG+ E+GK + E G
Sbjct: 133 DEEDQNEEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEK 192
Query: 354 TQDENGQTKRKLQA-GKKSQDKQKK 377
+DE + RK GK+++D ++K
Sbjct: 193 GEDEKEEEDRKETGDGKENEDGKEK 217
Score = 36.6 bits (83), Expect = 0.074
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 15/117 (12%)
Query: 274 KKKKRKQGGSPDEPDSKATRTDCSDNSDSDNDEGTEGEATEGLE-GTEAVEKGSRV---D 329
K +K ++ G D+ ++ D + D E +G +G E G + E+ R D
Sbjct: 149 KDEKGEEDGKEDKNGNEKGE-DAKEKEDGKKGEDGKGNGEDGKEKGEDEKEEEDRKETGD 207
Query: 330 G-EDEEGKEDG-REEG-----KEDPEKGALTTQDENGQTKRKLQAGKKSQDKQKKRQ 379
G E+E+GKE G ++EG KED ++ +DE G + +AGK+ +D +++ +
Sbjct: 208 GKENEDGKEKGDKKEGKDVKVKEDEKEREDGKEDEGGNEE---EAGKEKEDLKEEEE 261
Score = 35.0 bits (79), Expect = 0.21
Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 20/118 (16%)
Query: 270 DFRTKKKKRKQGGSPD-----EPDSKATRTDCSDNSDS-DNDEGTEGEATEGLEGTEAVE 323
D + +++ + G D E D K + D+ + ++G +GE +G G + E
Sbjct: 133 DEEDQNEEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDGKKGEDGKG-NGEDGKE 191
Query: 324 KGSRVDGEDEEGKEDGREEGKEDPEKGALTTQDENGQTKRKLQAGKKSQDKQKKRQRD 381
KG EDE+ +ED +E G ++E+G+ K + GK + K+ +++R+
Sbjct: 192 KG-----EDEKEEEDRKETGD--------GKENEDGKEKGDKKEGKDVKVKEDEKERE 236
Score = 34.7 bits (78), Expect = 0.28
Identities = 38/119 (31%), Positives = 54/119 (45%), Gaps = 24/119 (20%)
Query: 288 DSKATRTDCSDNSDSDNDEGTEGEATE-GLEGTEAV-------EKGSRVDGED------E 333
++K T S+ + E +ATE G E EAV E+ + D ED E
Sbjct: 84 EAKITEAPASEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEEEDQKEDEEDQNEEKGE 143
Query: 334 EGKED----GREEGKEDP---EKGALTTQDENGQTKRKLQAGKKSQDKQKKRQRDRMVE 385
GKED G E+GKED EKG + E+G +K + GK + + K++ D E
Sbjct: 144 AGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDG---KKGEDGKGNGEDGKEKGEDEKEE 199
Score = 30.4 bits (67), Expect = 5.3
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 268 TADFRTKKKKRKQGGSPDEPDSKATRTDCSDNSDSDNDEGTEGEATEGLEGTEAVEKGSR 327
T D + + +++G + D K + +++ G E EA + E + E+G
Sbjct: 205 TGDGKENEDGKEKGDKKEGKDVKVKEDEKEREDGKEDEGGNEEEAGKEKEDLKEEEEGKE 264
Query: 328 VDGEDEEGKEDGREEGKEDPE 348
EDE ++DG+ KE+P+
Sbjct: 265 ---EDEIKEDDGK---KEEPQ 279
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 49.3 bits (116), Expect = 1e-05
Identities = 84/376 (22%), Positives = 148/376 (39%), Gaps = 70/376 (18%)
Query: 274 KKKKRKQGGSPDEPDSKATRTDCSDNSDSDN-DEGTEG-EATEGLEGTEAVEKGSRVDGE 331
K K+ G DE +SK + NS ++ DE E ++ +G + + + G ++
Sbjct: 156 KSNKKWDGSEEDEDNSKKIKERSRINSSGESGDESDEFLQSRKGQKKNQKNKPGPNIESG 215
Query: 332 DEE--------------GKEDGREEGKEDPEKGALTTQDENGQTKRKLQAGKKSQDKQKK 377
+E+ ++ RE K D EK L E K +L+ GKK Q KQK+
Sbjct: 216 NEDDDASFKIKTVAQKKAEKKERERKKRDEEKAKLRKLKE----KEELETGKKDQSKQKE 271
Query: 378 RQRDRMVERIQFVCSL-----------CKYRTFYEDEMASHLDSKFHKEHFKYVGTKLPK 426
QR E ++ ++ + T ED+ + K K+ K G K K
Sbjct: 272 SQRKFEEETVKSKVTVDTGVIPASEEKAETPTAAEDD---NEGDKKKKDKKKKKGEKEEK 328
Query: 427 QTADFLQEYVTNKTKKTEELRKTVEDLDGLIHQIYRDQDLTQEIAMEHFVKKVEAAHCAA 486
+ K KK + TV+ + + ++ ++++ Q+ E +K++E
Sbjct: 329 E-----------KEKKKGPSKATVKAMQEALAKL-KEEEERQKREEEERIKRLEELEAKR 376
Query: 487 CDLFIPMQFGIIQKHLKTMDHNRNRRLMMEQSKKSSLMVARSIL--NNKLISKKLERYLK 544
++ + R R+ E+ +K L +L + + + E LK
Sbjct: 377 ------------KEEERLEQEKRERKKQKEKERKERLKKEGKLLTKSQREARARAEATLK 424
Query: 545 ------GENPFTDS-PEEEKEQEEAEGGALDEGAQGEAAGISEGAEGVPAQPPVPPEPAP 597
E P DS P++ E+ + + + Q E+ +SE E + A V + P
Sbjct: 425 LLQAQGVEVPSKDSLPKKRPIYEDKKRKKIPQ--QLESKEVSESME-LCAAVEVMEQGVP 481
Query: 598 GAVSPPPPPPPEEEEE 613
PPP PEEEE+
Sbjct: 482 EKEETPPPVEPEEEED 497
Score = 45.1 bits (105), Expect = 2e-04
Identities = 74/353 (20%), Positives = 140/353 (39%), Gaps = 40/353 (11%)
Query: 272 RTKKKKRKQGGSPDEPDSKATRTDCSDNSDSDN---DEGTEGEATEGLEGTEAVEKGSRV 328
+ K+K+ + G D+ K ++ + + D G + E E A E
Sbjct: 252 KLKEKEELETGKKDQSKQKESQRKFEEETVKSKVTVDTGVIPASEEKAETPTAAE----- 306
Query: 329 DGEDEEGKEDGREEGKEDPEKGALTTQDENGQTKRKLQAGK------KSQDKQKKRQRDR 382
+D EG + +++ K+ EK + + G +K ++A + K +++++KR+ +
Sbjct: 307 --DDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEE 364
Query: 383 MVERIQFVCSLCKYRTFYEDEMASHLDSKF--HKEHFKYVGTKLPKQTADF-LQEYVTNK 439
++R++ + + K E E K KE K G L K + + T K
Sbjct: 365 RIKRLEELEAKRKEEERLEQEKRERKKQKEKERKERLKKEGKLLTKSQREARARAEATLK 424
Query: 440 TKKTEELRKTVEDLDGLIHQIYRDQD---LTQEIAMEHFVKKVEAAHCAACDLFIPMQFG 496
+ + + +D IY D+ + Q++ + + +E CAA ++ M+ G
Sbjct: 425 LLQAQGVEVPSKDSLPKKRPIYEDKKRKKIPQQLESKEVSESMEL--CAAVEV---MEQG 479
Query: 497 IIQKHLKTMDHNRNRRLMMEQSKKSSL----MVARSILNNKLISKKLERYLKGENPFTDS 552
+ +K E ++ + L +A K+ K+ +K ENP +
Sbjct: 480 VPEKEETPPPVEPEEE---EDTEDAGLDDWEAMASDEETEKVEGNKVHIEVK-ENPEEEE 535
Query: 553 PEEEKEQEEAEGGALDEGAQGEAAGISEGAEGVPAQPPVPPEPAPGAVSPPPP 605
EEE+E+E+ E + E G SEG+EG V E G P
Sbjct: 536 EEEEEEEEDEE-----SEEEEEEEGESEGSEGDEEDEKVSDEKDSGKTLDKKP 583
Score = 37.4 bits (85), Expect = 0.043
Identities = 50/203 (24%), Positives = 78/203 (38%), Gaps = 35/203 (17%)
Query: 277 KRKQGGSPDEPDSKATRTDCSDNSDSDNDEGTEGEATEGLEGT---------------EA 321
++++ P EP+ + D D D + E TE +EG E
Sbjct: 482 EKEETPPPVEPEEEE---DTEDAGLDDWEAMASDEETEKVEGNKVHIEVKENPEEEEEEE 538
Query: 322 VEKGSRVDGEDEEGKEDGREEGKEDPEKGALTTQDENGQTKRKLQAGKKSQDKQKKRQRD 381
E+ + E+EE +E E + D E ++ + ++G+T K + + S D + D
Sbjct: 539 EEEEEDEESEEEEEEEGESEGSEGDEEDEKVSDEKDSGKTLDKKPSKEMSSDSEYDSDDD 598
Query: 382 RMVERIQFVCSLCKYRTFYEDEMASHLDSKFHKEHFKYVGT-KLPKQTADFLQEYVTNKT 440
R E + + A K EH K V T KL L T KT
Sbjct: 599 RTKEERAY-------------DKAKRRIEKRRLEHSKNVNTEKLRAPIICVLGHVDTGKT 645
Query: 441 KKTEELRKT-VED--LDGLIHQI 460
K ++LR T V+D G+ QI
Sbjct: 646 KILDKLRHTHVQDGEAGGITQQI 668
>gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens]
Length = 1312
Score = 48.5 bits (114), Expect = 2e-05
Identities = 73/351 (20%), Positives = 131/351 (37%), Gaps = 51/351 (14%)
Query: 285 DEPDSKATRTDCSDNSDSDNDEGTEGEATEGLEGTEAVEKGSRVDGEDEEGKEDGREEGK 344
D+P + R D+ D + E E TE E S GE+ E G+
Sbjct: 291 DQPTERQVRIQLKDHIDRSRKKRGEKEETEYEYSGSEEEDDSH--GEEGEPSSIMNVPGE 348
Query: 345 EDPEKGALTTQDENGQTKRKLQAGKKSQDKQKKRQRDRMVERIQFVCSLCKYRTFYEDEM 404
+ L Q EN K +A K+ Q Q+++QRD I+ + + R + E
Sbjct: 349 STLRREFLRLQQEN---KSNSEALKQQQQLQQQQQRDPEAH-IKHLLHQRQRRIEEQKEE 404
Query: 405 ASHLDSKFHKEHFKYVGTKLPKQTADFLQEYVTNKTKKTEELRKTVEDLDGLIHQIYRDQ 464
++ + +E ++ ++ + + + LR+ E Q Y+ +
Sbjct: 405 RRRVEEQQRRE----------REQRKLQEKEQQRRLEDMQALRREEERRQAEREQEYKRK 454
Query: 465 DLTQEIAMEHFVKKVEAAHCAACDLFIPMQFGIIQKHLKTMDHNRNRRLMMEQSKKSSLM 524
L ++ E ++++ H +LK++ + ++ + +Q ++ L
Sbjct: 455 QLEEQRQSERLQRQLQQEHA----------------YLKSLQQQQQQQQLQKQQQQQLLP 498
Query: 525 VARSILNNKLISKKLERYLKGENPFTDSPEEEKEQEEAEGGALDEGAQGEAAGISEGAEG 584
R K L Y +G NP D P +E EE +++ A G+ G
Sbjct: 499 GDR---------KPLYHYGRGMNP-ADKPAWAREVEERT--RMNKQQNSPLAKSKPGSTG 546
Query: 585 VPAQPPVPPEPAPGAVSP----PPPPPPEEEEEGAVPLLGGALQRQIRGIP 631
+PP+P + +PG P PP P E +EG L R + P
Sbjct: 547 --PEPPIP-QASPGPPGPLSQTPPMQRPVEPQEGPHKSLQDQPTRNLAAFP 594
>gi|6382071 diaphanous 2 isoform 12C [Homo sapiens]
Length = 1096
Score = 48.1 bits (113), Expect = 2e-05
Identities = 69/308 (22%), Positives = 124/308 (40%), Gaps = 49/308 (15%)
Query: 341 EEGKEDPEKGALTTQDENGQTKR--KLQAGKKSQDKQKKRQRDRMVERIQFVCSLCKYRT 398
EE D GA+TT E +R + G ++Q+ + + V +QF+ +L +
Sbjct: 287 EENILDKLLGAITTAAERNNRERFSPIVEGLENQEALQLQ-----VACMQFINALVT--S 339
Query: 399 FYEDEMASHLDSKFHKEHFKYVGTKLPKQTADFL-----------QEYVTNKTKKTEELR 447
YE + HL ++F + K + L ++ D L ++ +T + + ++R
Sbjct: 340 PYELDFRIHLRNEFLRSGLKTMLPDLKEKENDELDIQLKVFDENKEDDLTELSHRLNDIR 399
Query: 448 KTVEDLDGLIHQIYRDQDLTQEIAMEHFVKKVEAAHCAACDLFI-PMQFGIIQK------ 500
++D++ + H +Y L A +F+ ++ D +I P + II++
Sbjct: 400 AEMDDMNEVYHLLYNM--LKDTAAENYFLSILQHFLLIRNDYYIRPQYYKIIEECVSQIV 457
Query: 501 -HLKTMDHNRNRRLMME-------QSKKSSLMVARSILNNKLISKKL-ERYLKGENPFTD 551
H MD + R ++ S + V S SKK E + + +
Sbjct: 458 LHCSGMDPDFKYRQRLDIDLTHLIDSCVNKAKVEESEQKAAEFSKKFDEEFTARQEAQAE 517
Query: 552 SPEEEKEQEEAEGGALDEGAQGEAAGISEGAEGVPAQPPVP------PEPAP-----GAV 600
+ +++ +E E Q + S G G PA PP+P P PAP +
Sbjct: 518 LQKRDEKIKELEAEIQQLRTQAQVLSSSSGIPGPPAAPPLPGVGPPPPPPAPPLPGGAPL 577
Query: 601 SPPPPPPP 608
PPPPP P
Sbjct: 578 PPPPPPLP 585
>gi|5803003 diaphanous 2 isoform 156 [Homo sapiens]
Length = 1101
Score = 48.1 bits (113), Expect = 2e-05
Identities = 69/308 (22%), Positives = 124/308 (40%), Gaps = 49/308 (15%)
Query: 341 EEGKEDPEKGALTTQDENGQTKR--KLQAGKKSQDKQKKRQRDRMVERIQFVCSLCKYRT 398
EE D GA+TT E +R + G ++Q+ + + V +QF+ +L +
Sbjct: 287 EENILDKLLGAITTAAERNNRERFSPIVEGLENQEALQLQ-----VACMQFINALVT--S 339
Query: 399 FYEDEMASHLDSKFHKEHFKYVGTKLPKQTADFL-----------QEYVTNKTKKTEELR 447
YE + HL ++F + K + L ++ D L ++ +T + + ++R
Sbjct: 340 PYELDFRIHLRNEFLRSGLKTMLPDLKEKENDELDIQLKVFDENKEDDLTELSHRLNDIR 399
Query: 448 KTVEDLDGLIHQIYRDQDLTQEIAMEHFVKKVEAAHCAACDLFI-PMQFGIIQK------ 500
++D++ + H +Y L A +F+ ++ D +I P + II++
Sbjct: 400 AEMDDMNEVYHLLYNM--LKDTAAENYFLSILQHFLLIRNDYYIRPQYYKIIEECVSQIV 457
Query: 501 -HLKTMDHNRNRRLMME-------QSKKSSLMVARSILNNKLISKKL-ERYLKGENPFTD 551
H MD + R ++ S + V S SKK E + + +
Sbjct: 458 LHCSGMDPDFKYRQRLDIDLTHLIDSCVNKAKVEESEQKAAEFSKKFDEEFTARQEAQAE 517
Query: 552 SPEEEKEQEEAEGGALDEGAQGEAAGISEGAEGVPAQPPVP------PEPAP-----GAV 600
+ +++ +E E Q + S G G PA PP+P P PAP +
Sbjct: 518 LQKRDEKIKELEAEIQQLRTQAQVLSSSSGIPGPPAAPPLPGVGPPPPPPAPPLPGGAPL 577
Query: 601 SPPPPPPP 608
PPPPP P
Sbjct: 578 PPPPPPLP 585
>gi|24850117 misshapen/NIK-related kinase isoform 2 [Homo sapiens]
Length = 1303
Score = 47.8 bits (112), Expect = 3e-05
Identities = 70/334 (20%), Positives = 127/334 (38%), Gaps = 51/334 (15%)
Query: 285 DEPDSKATRTDCSDNSDSDNDEGTEGEATEGLEGTEAVEKGSRVDGEDEEGKEDGREEGK 344
D+P + R D+ D + E E TE E S GE+ E G+
Sbjct: 291 DQPTERQVRIQLKDHIDRSRKKRGEKEETEYEYSGSEEEDDSH--GEEGEPSSIMNVPGE 348
Query: 345 EDPEKGALTTQDENGQTKRKLQAGKKSQDKQKKRQRDRMVERIQFVCSLCKYRTFYEDEM 404
+ L Q EN K +A K+ Q Q+++QRD I+ + + R + E
Sbjct: 349 STLRREFLRLQQEN---KSNSEALKQQQQLQQQQQRDPEAH-IKHLLHQRQRRIEEQKEE 404
Query: 405 ASHLDSKFHKEHFKYVGTKLPKQTADFLQEYVTNKTKKTEELRKTVEDLDGLIHQIYRDQ 464
++ + +E ++ ++ + + + LR+ E Q Y+ +
Sbjct: 405 RRRVEEQQRRE----------REQRKLQEKEQQRRLEDMQALRREEERRQAEREQEYKRK 454
Query: 465 DLTQEIAMEHFVKKVEAAHCAACDLFIPMQFGIIQKHLKTMDHNRNRRLMMEQSKKSSLM 524
L ++ E ++++ H +LK++ + ++ + +Q ++ L
Sbjct: 455 QLEEQRQSERLQRQLQQEHA----------------YLKSLQQQQQQQQLQKQQQQQLLP 498
Query: 525 VARSILNNKLISKKLERYLKGENPFTDSPEEEKEQEEAEGGALDEGAQGEAAGISEGAEG 584
R K L Y +G NP D P +E EE +++ A G+ G
Sbjct: 499 GDR---------KPLYHYGRGMNP-ADKPAWAREVEERT--RMNKQQNSPLAKSKPGSTG 546
Query: 585 VPAQPPVPPEPAPGAVSP----PPPPPPEEEEEG 614
+PP+P + +PG P PP P E +EG
Sbjct: 547 --PEPPIP-QASPGPPGPLSQTPPMQRPVEPQEG 577
>gi|27436917 misshapen/NIK-related kinase isoform 3 [Homo sapiens]
Length = 1332
Score = 47.8 bits (112), Expect = 3e-05
Identities = 70/334 (20%), Positives = 127/334 (38%), Gaps = 51/334 (15%)
Query: 285 DEPDSKATRTDCSDNSDSDNDEGTEGEATEGLEGTEAVEKGSRVDGEDEEGKEDGREEGK 344
D+P + R D+ D + E E TE E S GE+ E G+
Sbjct: 291 DQPTERQVRIQLKDHIDRSRKKRGEKEETEYEYSGSEEEDDSH--GEEGEPSSIMNVPGE 348
Query: 345 EDPEKGALTTQDENGQTKRKLQAGKKSQDKQKKRQRDRMVERIQFVCSLCKYRTFYEDEM 404
+ L Q EN K +A K+ Q Q+++QRD I+ + + R + E
Sbjct: 349 STLRREFLRLQQEN---KSNSEALKQQQQLQQQQQRDPEAH-IKHLLHQRQRRIEEQKEE 404
Query: 405 ASHLDSKFHKEHFKYVGTKLPKQTADFLQEYVTNKTKKTEELRKTVEDLDGLIHQIYRDQ 464
++ + +E ++ ++ + + + LR+ E Q Y+ +
Sbjct: 405 RRRVEEQQRRE----------REQRKLQEKEQQRRLEDMQALRREEERRQAEREQEYKRK 454
Query: 465 DLTQEIAMEHFVKKVEAAHCAACDLFIPMQFGIIQKHLKTMDHNRNRRLMMEQSKKSSLM 524
L ++ E ++++ H +LK++ + ++ + +Q ++ L
Sbjct: 455 QLEEQRQSERLQRQLQQEHA----------------YLKSLQQQQQQQQLQKQQQQQLLP 498
Query: 525 VARSILNNKLISKKLERYLKGENPFTDSPEEEKEQEEAEGGALDEGAQGEAAGISEGAEG 584
R K L Y +G NP D P +E EE +++ A G+ G
Sbjct: 499 GDR---------KPLYHYGRGMNP-ADKPAWAREVEERT--RMNKQQNSPLAKSKPGSTG 546
Query: 585 VPAQPPVPPEPAPGAVSP----PPPPPPEEEEEG 614
+PP+P + +PG P PP P E +EG
Sbjct: 547 --PEPPIP-QASPGPPGPLSQTPPMQRPVEPQEG 577
>gi|7657335 misshapen/NIK-related kinase isoform 1 [Homo sapiens]
Length = 1295
Score = 47.8 bits (112), Expect = 3e-05
Identities = 70/334 (20%), Positives = 127/334 (38%), Gaps = 51/334 (15%)
Query: 285 DEPDSKATRTDCSDNSDSDNDEGTEGEATEGLEGTEAVEKGSRVDGEDEEGKEDGREEGK 344
D+P + R D+ D + E E TE E S GE+ E G+
Sbjct: 291 DQPTERQVRIQLKDHIDRSRKKRGEKEETEYEYSGSEEEDDSH--GEEGEPSSIMNVPGE 348
Query: 345 EDPEKGALTTQDENGQTKRKLQAGKKSQDKQKKRQRDRMVERIQFVCSLCKYRTFYEDEM 404
+ L Q EN K +A K+ Q Q+++QRD I+ + + R + E
Sbjct: 349 STLRREFLRLQQEN---KSNSEALKQQQQLQQQQQRDPEAH-IKHLLHQRQRRIEEQKEE 404
Query: 405 ASHLDSKFHKEHFKYVGTKLPKQTADFLQEYVTNKTKKTEELRKTVEDLDGLIHQIYRDQ 464
++ + +E ++ ++ + + + LR+ E Q Y+ +
Sbjct: 405 RRRVEEQQRRE----------REQRKLQEKEQQRRLEDMQALRREEERRQAEREQEYKRK 454
Query: 465 DLTQEIAMEHFVKKVEAAHCAACDLFIPMQFGIIQKHLKTMDHNRNRRLMMEQSKKSSLM 524
L ++ E ++++ H +LK++ + ++ + +Q ++ L
Sbjct: 455 QLEEQRQSERLQRQLQQEHA----------------YLKSLQQQQQQQQLQKQQQQQLLP 498
Query: 525 VARSILNNKLISKKLERYLKGENPFTDSPEEEKEQEEAEGGALDEGAQGEAAGISEGAEG 584
R K L Y +G NP D P +E EE +++ A G+ G
Sbjct: 499 GDR---------KPLYHYGRGMNP-ADKPAWAREVEERT--RMNKQQNSPLAKSKPGSTG 546
Query: 585 VPAQPPVPPEPAPGAVSP----PPPPPPEEEEEG 614
+PP+P + +PG P PP P E +EG
Sbjct: 547 --PEPPIP-QASPGPPGPLSQTPPMQRPVEPQEG 577
>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
Length = 1184
Score = 47.4 bits (111), Expect = 4e-05
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 275 KKKRKQGGSPDEPDSK----ATRTDCSDNSDSDNDEGTEG-EATEGLEGTEAVEKGSRVD 329
KK++ Q P EP K A + D S + D+ +GTE + E EG E E
Sbjct: 59 KKRKTQDKQPQEPAPKRKPFAVKADSSSVDECDDSDGTEDMDEKEEDEGEEYSEDNDEPG 118
Query: 330 GEDEEGKEDGREEGKEDPEKGALTTQDENGQTKRKLQAGKKSQDKQKKRQRD 381
EDEE +E REE +E E+ DE+G+ + ++ ++++++ + +
Sbjct: 119 DEDEEDEEGDREEEEEIEEED--EDDDEDGEDVEDEEEEEEEEEEEEEEEEN 168
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 47.0 bits (110), Expect = 5e-05
Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 282 GSPDEPDSKATRTDCSDNSDSDNDEGTEGEATEGLEGTEAVEKGSRVDGEDEEGKEDGRE 341
G +E + K + + +EG EGE +G EG E E+ +GE+EEG+ +G E
Sbjct: 912 GEEEEGEGKGEEEGEEGEGEGEEEEG-EGEGEDG-EG-EGEEEEGEWEGEEEEGEGEGEE 968
Query: 342 EGKEDPEKGALTTQDENGQTKRKLQAGKKSQDKQKKRQRD 381
EG+ + E+G ++E G+ + + + G++ +++ + + +
Sbjct: 969 EGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEE 1008
Score = 45.8 bits (107), Expect = 1e-04
Identities = 25/91 (27%), Positives = 52/91 (57%), Gaps = 8/91 (8%)
Query: 298 DNSDSDNDEGTEGEATEGLEGTEAVEKGSRVDGEDEEGKEDGREEGKEDPEKGALTTQDE 357
+ + + +E EGE EG EG E+G +GE+EEG+E+G EEG+ + E ++E
Sbjct: 960 EEGEGEGEEEGEGEGEEG-EGEGEEEEGEG-EGEEEEGEEEGEEEGEGEEEGEGEGEEEE 1017
Query: 358 NGQTKRKLQA------GKKSQDKQKKRQRDR 382
G+ + +++ G++ + +++ +R++
Sbjct: 1018 EGEVEGEVEGEEGEGEGEEEEGEEEGEEREK 1048
Score = 43.9 bits (102), Expect = 5e-04
Identities = 38/174 (21%), Positives = 76/174 (43%), Gaps = 13/174 (7%)
Query: 275 KKKRKQGGSPDEPDSKATRTDCSDNSDSDNDEGTEGEATE-GLEGTEAVEKGSRVDGEDE 333
+++ +G +E + + + + EG E E E G E E E+G E+E
Sbjct: 958 EEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEE 1017
Query: 334 EGKEDGREEGKEDPEKGALTTQDENGQTKRKLQAGKKSQDKQKKRQRDRMVERIQFVCSL 393
EG+ +G EG+E +G +E G+ + K G++++ +++ + +
Sbjct: 1018 EGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEE----------- 1066
Query: 394 CKYRTFYEDEMASHLDSKFHKEHFKYVGTKLPKQTADFLQEYVTNKTKKTEELR 447
KY+ E+E D + +K+ K G+ + + ++ VTN +E R
Sbjct: 1067 GKYQETGEEE-NERQDGEEYKKVSKIKGSVKYGKHKTYQKKSVTNTQGNGKEQR 1119
Score = 43.5 bits (101), Expect = 6e-04
Identities = 25/112 (22%), Positives = 62/112 (55%), Gaps = 7/112 (6%)
Query: 272 RTKKKKRKQGGSPDEPDSKATRTDCSDNSDSDNDEGTEGEATEGLEGTEAVEKGSRVD-- 329
+ + ++ ++GG + + + D + + + + EGE E +EG E+G R
Sbjct: 721 KERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEE-VEGEREKEEGERKKEE 779
Query: 330 --GEDEEGKEDGRE-EGKEDPEKGALTTQDENGQTK-RKLQAGKKSQDKQKK 377
G++E+G+E+G + EG+E+ +G ++E G+ + +++ GK ++++++
Sbjct: 780 RAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEE 831
Score = 42.4 bits (98), Expect = 0.001
Identities = 30/106 (28%), Positives = 58/106 (54%), Gaps = 11/106 (10%)
Query: 274 KKKKRKQGGSPDEPDSKATRTDCSDNSDSDNDEGTEGEATEGLEGTEAVEKGSRVDGEDE 333
K++ +K+ G +E + K + + +EG E E EG E E+G R + E++
Sbjct: 699 KEEWKKRDG--EEQEQKEREQGHQKERNQEMEEGGEEEHGEGEE-----EEGDREEEEEK 751
Query: 334 EGKEDGREEGKEDPEKGALTTQDENGQTKRKLQAGKKSQDKQKKRQ 379
EG +G+EEG+ + +G + E G+ K++ +AGK+ + +++ Q
Sbjct: 752 EG--EGKEEGEGEEVEG--EREKEEGERKKEERAGKEEKGEEEGDQ 793
Score = 39.7 bits (91), Expect = 0.009
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 280 QGGSPDEPDSKATRTDCSDNSDSDNDEGTEGEATEGLEGTEAVEKGSRVDGEDEEGKEDG 339
+GG +E K R + + + + +EG EGE EG E E +GE+ EG+E+G
Sbjct: 815 EGGEVEE--GKGEREEEEEEGEGEEEEG-EGEEEEGEGEEEEGEGKGEEEGEEGEGEEEG 871
Query: 340 RE-EGKEDPEKGALTTQDE 357
E EG+ + E+G ++E
Sbjct: 872 EEGEGEGEEEEGEGEGEEE 890
Score = 38.9 bits (89), Expect = 0.015
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 282 GSPDEPDSKATRTDCSDNSDSDNDEGTEGEA----TEGLEGTEAVEKGSRVDGEDEEGK- 336
G ++ + + + + + + +EG +GE TEG G E E G GE EEGK
Sbjct: 766 GEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEG-RGEEKEEGGEVEGGEVEEGKG 824
Query: 337 --EDGREEGKEDPEKGALTTQDENGQTKRKLQAGKKSQDKQK 376
E+ EEG+ + E+G ++E G+ + + GK ++ ++
Sbjct: 825 EREEEEEEGEGEEEEG--EGEEEEGEGEEEEGEGKGEEEGEE 864
Score = 38.9 bits (89), Expect = 0.015
Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 274 KKKKRKQGGSPDEPDSKATRTDCSDNSDSDNDEGTEGEATEGLEGTEAVEKGS----RVD 329
K++K ++ G E + + T + + EG E E +G E E E+G +
Sbjct: 783 KEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKG-EREEEEEEGEGEEEEGE 841
Query: 330 GEDEEGK---EDGREEGKEDPEKGALTTQDENGQTKRKLQAGKKSQDKQ 375
GE+EEG+ E+G +G+E+ E+G + E G+ + + + G+ +++
Sbjct: 842 GEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEE 890
Score = 37.4 bits (85), Expect = 0.043
Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 274 KKKKRKQGGSPDEPDSKATRTDCSDNSDSDN----DEGTEGEATEGLEGTEAVEKGSRVD 329
++++ ++ G +E + + + + +EG EGE E EG E +G +
Sbjct: 825 EREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEE--EGEEGEGEGEEEE 882
Query: 330 GEDEEGKEDGREEGKEDPEKGALTTQDENGQTKRKLQAGKKSQDKQK 376
GE E G+E+G EG+E+ +G + E G+ + + GK ++ ++
Sbjct: 883 GEGE-GEEEGEGEGEEEEGEGEGEEEGE-GEGEEEEGEGKGEEEGEE 927
Score = 37.0 bits (84), Expect = 0.057
Identities = 23/103 (22%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 275 KKKRKQGGSPDEPDSKATRTDCSDNSDSDNDEGTEGEATEGLEGTEAVEKGS---RVDGE 331
+++ +G +E + + + +E EGE E EG E+G +GE
Sbjct: 850 EEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGE 909
Query: 332 DEEGKEDGREEGKEDPEKGALTTQDENGQTKRKLQAGKKSQDK 374
E +E+G +G+E+ E+G ++E G+ + + G+ +++
Sbjct: 910 GEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEE 952
Score = 35.8 bits (81), Expect = 0.13
Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 13/114 (11%)
Query: 274 KKKKRKQGGSPDEPDSKATRTDCSDNSDSDNDEGTEGEATEGLEGTEAVEKGSRVDGEDE 333
K ++ + G +E + + + + +E EGE E EG E+ +GE+E
Sbjct: 857 KGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEE-EGEGEGEEEGEGEGEEE 915
Query: 334 EGKEDGREEGKE------------DPEKGALTTQDENGQTKRKLQAGKKSQDKQ 375
EG+ G EEG+E + E G ++E G+ + + + G+ +++
Sbjct: 916 EGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEE 969
Score = 35.0 bits (79), Expect = 0.21
Identities = 22/106 (20%), Positives = 48/106 (45%)
Query: 274 KKKKRKQGGSPDEPDSKATRTDCSDNSDSDNDEGTEGEATEGLEGTEAVEKGSRVDGEDE 333
K K R + P E + + + D + E E E E + +E+G + +
Sbjct: 679 KDKGRGEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEG 738
Query: 334 EGKEDGREEGKEDPEKGALTTQDENGQTKRKLQAGKKSQDKQKKRQ 379
E +E REE +E +G + E + +R+ + G++ ++++ ++
Sbjct: 739 EEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKE 784
Score = 35.0 bits (79), Expect = 0.21
Identities = 31/100 (31%), Positives = 40/100 (40%), Gaps = 10/100 (10%)
Query: 544 KGENPFTDSPEEEKEQEEAEGGALDEGAQGEAAGISEGAEGVPAQPPVPPEPAPGAVSPP 603
+GE + E E E+EE EG +EG +GE G E EG E G
Sbjct: 899 EGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWE-- 956
Query: 604 PPPPPEEEEEGAVPLLGGALQRQIRGIPGLDVEDDEEGGG 643
EEE EG G + + G G ++EEG G
Sbjct: 957 ---GEEEEGEGE-----GEEEGEGEGEEGEGEGEEEEGEG 988
Score = 34.7 bits (78), Expect = 0.28
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 19/105 (18%)
Query: 295 DCSDNSD-SDNDEGTEGEATEGLEGTEAVEKGSRVDGEDEEG-------KEDGREEGKED 346
D +D ++ S+ + GEA +G EG R DG EEG +++ RE+G++D
Sbjct: 629 DLTDKAEVSEGKAKSVGEAEDGPEG--------RGDGTCEEGSSGAEHWQDEEREKGEKD 680
Query: 347 PEKGALTTQDENGQTKRKLQAGKK---SQDKQKKRQRDRMVERIQ 388
+G + E + + + KK + +QK+R++ ER Q
Sbjct: 681 KGRGEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQ 725
Score = 34.7 bits (78), Expect = 0.28
Identities = 28/113 (24%), Positives = 57/113 (50%), Gaps = 14/113 (12%)
Query: 274 KKKKRKQGGSPDEPDSKATRTDCSDNSDSDNDEGTEGEATEG--LEGTEAVE-KGSRVD- 329
++KK ++ G ++ + + + + + + EG E EG +EG E E KG R +
Sbjct: 774 ERKKEERAGKEEKGEEEGDQGE----GEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEE 829
Query: 330 ---GEDEEGKEDGRE---EGKEDPEKGALTTQDENGQTKRKLQAGKKSQDKQK 376
GE EE + +G E EG+E+ +G + E G+ + + + G+ ++++
Sbjct: 830 EEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEE 882
Score = 33.5 bits (75), Expect = 0.62
Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 2/109 (1%)
Query: 272 RTKKKKRKQGGSPDEPDSKATRTDCSDNSDSDNDEGTEGEATEGLEGTEAVEKGSRVDGE 331
R K +K K G + P + ++ + +G E E E +G + +G
Sbjct: 674 REKGEKDKGRGEMERPGEG--EKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGG 731
Query: 332 DEEGKEDGREEGKEDPEKGALTTQDENGQTKRKLQAGKKSQDKQKKRQR 380
+EE E EEG + E+ E G+ + +K + ++KK +R
Sbjct: 732 EEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEER 780
Score = 33.1 bits (74), Expect = 0.82
Identities = 32/101 (31%), Positives = 43/101 (42%), Gaps = 11/101 (10%)
Query: 544 KGENPFTDSPEEEKEQ-EEAEGGALDEGAQGEAAGISEGAEGVPAQPPVPPEPAPGAVSP 602
+GE T+ EEKE+ E EGG ++EG +GE E EG + E G
Sbjct: 795 EGEEEETEGRGEEKEEGGEVEGGEVEEG-KGEREEEEEEGEGEEEEGEGEEEEGEG---- 849
Query: 603 PPPPPPEEEEEGAVPLLGGALQRQIRGIPGLDVEDDEEGGG 643
EEE EG G + + G G ++EEG G
Sbjct: 850 -----EEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEG 885
Score = 32.7 bits (73), Expect = 1.1
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 276 KKRKQGGSPDEPDSKATRTDCSDNSDS----DNDEGTEGEATEGLEGTEAVEKGSRVDGE 331
K + G + D P+ + T C + S ++E +GE +G E +G + E
Sbjct: 640 KAKSVGEAEDGPEGRGDGT-CEEGSSGAEHWQDEEREKGEKDKGRGEMERPGEGEKELAE 698
Query: 332 DEEGKE-DGREEGKEDPEKGALTTQDENGQTKRKLQAGKKSQDKQKKRQRDRMVE 385
EE K+ DG E+ +++ E+G Q E Q + G++ + ++ + DR E
Sbjct: 699 KEEWKKRDGEEQEQKEREQG---HQKERNQEME--EGGEEEHGEGEEEEGDREEE 748
Score = 31.6 bits (70), Expect = 2.4
Identities = 33/107 (30%), Positives = 41/107 (38%), Gaps = 6/107 (5%)
Query: 537 KKLERYLKGENPFTDSPEEEKEQEEAEGGALDEGAQGEAAGISEGAEGVPAQPPVPPEPA 596
KK ER K E + + E E+EE EG G + E G EG E + E
Sbjct: 776 KKEERAGKEEKGEEEGDQGEGEEEETEG----RGEEKEEGGEVEGGEVEEGKGEREEEEE 831
Query: 597 PGAVSPPPPPPPEEEEEGAVPLLGGALQRQIRGIPGLDVEDDEEGGG 643
G EEE EG G + + G G E+ EEG G
Sbjct: 832 EGEGEEEEGEGEEEEGEGEEE--EGEGKGEEEGEEGEGEEEGEEGEG 876
Score = 30.4 bits (67), Expect = 5.3
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 282 GSPDEPDSKATRTDCSDNSDSDNDEGTEGEATEGLEGTEAV---EKGSRVDGEDEEGKED 338
G+ +E S A + + D+G GE EG + + E+ + DGE++E KE
Sbjct: 657 GTCEEGSSGAEHWQDEEREKGEKDKG-RGEMERPGEGEKELAEKEEWKKRDGEEQEQKE- 714
Query: 339 GREEGKEDPEKGALTTQDENGQTKRKLQAGKKSQDKQKK 377
RE+G + + E + + + G + ++++K+
Sbjct: 715 -REQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKE 752
Score = 30.4 bits (67), Expect = 5.3
Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 6/105 (5%)
Query: 545 GENPFTDSPEEE---KEQEEAEGGALDEGAQGEAAGISEGAEGVPAQPPVPPEPAPGAVS 601
GE + EEE +E+EE EG +EG E G E EG + + G
Sbjct: 731 GEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEE 790
Query: 602 PPPPPPPEEEEE--GAVPLLGGALQ-RQIRGIPGLDVEDDEEGGG 643
EEE E G GG ++ ++ G E++EEG G
Sbjct: 791 GDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEG 835
Score = 29.6 bits (65), Expect = 9.0
Identities = 33/101 (32%), Positives = 38/101 (37%), Gaps = 5/101 (4%)
Query: 544 KGENPFTDSPEEEKEQEEAEGGALDEGAQGEAAGISEGAEGVPAQPPVPPEPAPGAVSPP 603
+GE + EEE E EE EG E E G EG EG + E G
Sbjct: 834 EGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEG---EGEGEEEEGEGEGEEE 890
Query: 604 PPPPPEEEE-EGAVPLLGGALQRQIRGIPGLDVEDDEEGGG 643
EEEE EG G + G G E+ EEG G
Sbjct: 891 GEGEGEEEEGEGEGEEEGEGEGEEEEG-EGKGEEEGEEGEG 930
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 47.0 bits (110), Expect = 5e-05
Identities = 90/410 (21%), Positives = 153/410 (37%), Gaps = 57/410 (13%)
Query: 256 MKQMRRTWKTWTTADFRTKKKKRKQGGSPDEPDSKATRTDCSDNSDSDNDEGTEGEATEG 315
M + +WK T + +KK+RK+ E ++ R SD+ DS D EGE +
Sbjct: 1 MGDEKDSWKVKTLDEILQEKKRRKE----QEEKAEIKRLKNSDDRDSKRDSLEEGELRDH 56
Query: 316 -LEGTEAVEKGSRVDGEDEEGKEDG------------------REEGKEDPEKGALTTQD 356
+E T R D ++ G+ED R++ K +K A +
Sbjct: 57 CMEITIRNSPYRREDSMEDRGEEDDSLAIKPPQQMSRKEKVHHRKDEKRKEKKHARVKEK 116
Query: 357 ENGQTKRKLQAGKKSQDKQKKRQRDRMVERIQFVCSLCKYRTFYEDEMASHLDSKFHKEH 416
E +RK ++ QDK + R+ +R R + + + E + L+ K +E
Sbjct: 117 EREHERRKRH--REEQDKAR-REWERQKRR-----EMAREHSRRERDRLEQLERKRERER 168
Query: 417 FKYVGTKLPKQTADFLQEYVTNKTKKTEELRKTVEDLDGLIHQIYRDQDLTQEIAMEHFV 476
K+ +Q + Q + ++ EE RK E R+ E +
Sbjct: 169 ------KMREQQKE--QREQKERERRAEERRKERE--------ARREVSAHHRTMREDYS 212
Query: 477 KKVEAAHCAACDLFIPMQFGIIQKHLKTMDHNRNRRLMMEQSKKSSLMVARSILNNKLIS 536
KV+A+H + P + + K + + M E+ S L + I +++ +
Sbjct: 213 DKVKASHWSRSPPRPPRERFELGDGRKPVKEEK----MEERDLLSDL---QDISDSERKT 265
Query: 537 KKLERYLKGENPFTDSPEEEKEQEEAEGGALDEGAQGEAAGISEGAEGVPAQPPVPPEPA 596
E ++ EEE+E+EE EG +E + E E E + E +
Sbjct: 266 SSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEE-EEEEEETGSNSEEASEQS 324
Query: 597 PGAVSPPPPPPPEEEEEGAVPLLGGALQRQIRGIPGLDVEDDEEGGGGAP 646
VS EE E L+ + + G E +EE G G P
Sbjct: 325 AEEVSEEEMSEDEERENENHLLV--VPESRFDRDSGESEEAEEEVGEGTP 372
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 45.8 bits (107), Expect = 1e-04
Identities = 86/396 (21%), Positives = 147/396 (37%), Gaps = 30/396 (7%)
Query: 256 MKQMRRTWKTWTTADFRTKKKKRKQGGSPDEPDSKATRTDCSDNSDSDNDEGTEGEATEG 315
M + +WK T + +KK+RK+ E ++ R SD+ DS D EGE +
Sbjct: 1 MGDEKDSWKVKTLDEILQEKKRRKE----QEEKAEIKRLKNSDDRDSKRDSLEEGELRDH 56
Query: 316 -LEGTEAVEKGSRVDGEDEEGKEDGREEGKEDPEKGALTT----QDENGQTKRKLQAGKK 370
+E T R D ++ G+ED K + +DE + K K K+
Sbjct: 57 CMEITIRNSPYRREDSMEDRGEEDDSLAIKPPQQMSRKEKVHHRKDEKRKEKWKHARVKE 116
Query: 371 SQDKQKKRQRDRMVERIQFVCSLCKYRTFYEDEMASHLDSKFHKEHFKYVGTKLPKQTAD 430
+ +++KR R+ ++ + K R + D E + K+ +Q +
Sbjct: 117 REHERRKRHREEQ-DKARREWERQKRREMAREHSRRERDRLEQLERKRERERKMREQQKE 175
Query: 431 FLQEYVTNKTKKTEELRKTVEDLDGLIHQIYRDQDLTQEIAMEHFVKKVEAAHCAACDLF 490
Q + ++ EE RK E R+ E + KV+A+H +
Sbjct: 176 --QREQKERERRAEERRKERE--------ARREVSAHHRTMREDYSDKVKASHWSRSPPR 225
Query: 491 IPMQFGIIQKHLKTMDHNRNRRLMMEQSKKSSLMVARSILNNKLISKKLERYLKGENPFT 550
P + + K + + M E+ S L + I +++ + E +
Sbjct: 226 PPRERFELGDGRKPVKEEK----MEERDLLSDL---QDISDSERKTSSAESSSAESGSGS 278
Query: 551 DSPEEEKEQEEAEGGALDEGAQGEAAGISEGAEGVPAQPPVPPEPAPGAVSPPPPPPPEE 610
+ EEE+E+EE EG +E + E E E + E + VS EE
Sbjct: 279 EEEEEEEEEEEEEGSTSEESEEEEEEE-EEEEEETGSNSEEASEQSAEEVSEEEMSEDEE 337
Query: 611 EEEGAVPLLGGALQRQIRGIPGLDVEDDEEGGGGAP 646
E L+ + + G E +EE G G P
Sbjct: 338 RENENHLLV--VPESRFDRDSGESEEAEEEVGEGTP 371
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 45.8 bits (107), Expect = 1e-04
Identities = 81/400 (20%), Positives = 153/400 (38%), Gaps = 28/400 (7%)
Query: 256 MKQMRRTWKTWTTADFRTKKKKRKQGGSPDEPDSKATRTDCSDNSDSDNDEGTEGEATEG 315
M + +WK T + +KK+RK+ E ++ R SD+ DS D EGE +
Sbjct: 1 MGDEKDSWKVKTLDEILQEKKRRKE----QEEKAEIKRLKNSDDRDSKRDSLEEGELRDH 56
Query: 316 -LEGTEAVEKGSRVDGEDEEGKEDGREEGKEDPEKGALTTQDENGQTKRKLQAGKKSQDK 374
+E T R D ++ G+ED K + KRK + + ++K
Sbjct: 57 CMEITIRNSPYRREDSMEDRGEEDDSLAIKPPQQMSRKEKVHHRKDEKRKEKKHARVKEK 116
Query: 375 QKKRQRDRMVERIQFVCSLCKYRTFYEDEMASHLDSKFHKEHFKYVGTKLPKQTADFLQE 434
+++ +R + Q K R +E + + + + G L + + L+
Sbjct: 117 EREHERRKRHREEQD-----KARREWERQKRREMAREHSRRERGNDGVCLFRDRLEQLER 171
Query: 435 YVTNKTKKTEELRKTVE--DLDGLIHQIYRDQDLTQEIAMEH------FVKKVEAAHCAA 486
+ K E+ ++ E + + + ++++ +E++ H + KV+A+H +
Sbjct: 172 KRERERKMREQQKEQREQKERERRAEERRKEREARREVSAHHRTMREDYSDKVKASHWSR 231
Query: 487 CDLFIPMQFGIIQKHLKTMDHNRNRRLMMEQSKKSSLMVARSILNNKLISKKLERYLKGE 546
P + + K + + M E+ S L + I +++ + E
Sbjct: 232 SPPRPPRERFELGDGRKPVKEEK----MEERDLLSDL---QDISDSERKTSSAESSSAES 284
Query: 547 NPFTDSPEEEKEQEEAEGGALDEGAQGEAAGISEGAEGVPAQPPVPPEPAPGAVSPPPPP 606
++ EEE+E+EE EG +E + E E E + E + VS
Sbjct: 285 GSGSEEEEEEEEEEEEEGSTSEESEEEEEEE-EEEEEETGSNSEEASEQSAEEVSEEEMS 343
Query: 607 PPEEEEEGAVPLLGGALQRQIRGIPGLDVEDDEEGGGGAP 646
EE E L+ + + G E +EE G G P
Sbjct: 344 EDEERENENHLLV--VPESRFDRDSGESEEAEEEVGEGTP 381
>gi|155030232 proline, glutamic acid and leucine rich protein 1 [Homo
sapiens]
Length = 1130
Score = 45.4 bits (106), Expect = 2e-04
Identities = 30/81 (37%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 540 ERYLKGENPFTDSPEEEKEQEEAEGGALDEGAQGEAAG-ISEGAEGVPAQPP-VPPEPAP 597
E + + E + EEE E+EE E +++ G A G + EGA P PP +PP +P
Sbjct: 933 EEFEEEEGELEEEEEEEDEEEEEELEEVEDLEFGTAGGEVEEGAPPPPTLPPALPPPESP 992
Query: 598 GAVSPPPPPPP----EEEEEG 614
V P P P P E EE G
Sbjct: 993 PKVQPEPEPEPGLLLEVEEPG 1013
Score = 36.2 bits (82), Expect = 0.096
Identities = 26/65 (40%), Positives = 27/65 (41%), Gaps = 16/65 (24%)
Query: 587 AQPPVP----PEPAPGAVSP-PPPPPPEEEEEGAVPLLGGALQRQIRGIPGLDVEDDEEG 641
A PPVP PE P A P PPPPPP G V L P V + G
Sbjct: 819 ASPPVPAKEEPEELPAAPGPLPPPPPPPPPVPGPVTL-----------PPPQLVPEGTPG 867
Query: 642 GGGAP 646
GGG P
Sbjct: 868 GGGPP 872
Score = 33.5 bits (75), Expect = 0.62
Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 6/62 (9%)
Query: 582 AEGVPAQPPVPPEPAPGAVS-PPPPPPPEEEEEGAVPLLGGALQRQIR--GIPGLDVEDD 638
A G PP PP P PG V+ PPP PE G P AL+ + I D E++
Sbjct: 835 APGPLPPPPPPPPPVPGPVTLPPPQLVPEGTPGGGGP---PALEEDLTVININSSDEEEE 891
Query: 639 EE 640
EE
Sbjct: 892 EE 893
Score = 32.7 bits (73), Expect = 1.1
Identities = 27/108 (25%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 282 GSPDEPDSKATRTDCSDNSDSDNDEGTEGEATEGLEGTEAVEKGSRVDGEDEEGKEDGRE 341
G+P A D + + + +DE E E E E E E+ + E+EE +E+ E
Sbjct: 864 GTPGGGGPPALEEDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFE-EEEEDEEEYFE 922
Query: 342 EGKEDPEKGALTTQDENGQTKRKLQAGKKSQDKQKKRQRDRMVERIQF 389
E +E+ E+ ++E G+ L+ ++ +D++++ + + VE ++F
Sbjct: 923 EEEEEEEEFEEEFEEEEGE----LEEEEEEEDEEEEEELEE-VEDLEF 965
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 45.4 bits (106), Expect = 2e-04
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Query: 540 ERYLKGENPFTDSPEEEKEQEEAEGGALD------EGAQGEAAGISEGAE-----GVPAQ 588
E + E + +E+E+EE E D EG G G G + G
Sbjct: 14 EMVVSEEEEEEEEEGDEEEEEEVEAADEDDEEDDDEGVLGRGPGHDRGRDRHSPPGCHLF 73
Query: 589 PPVPPEPAPGAVSPPPPPPPEEEEEGAVPLLGGALQRQ 626
PP PP P P PPPPPPP++++ +P G +R+
Sbjct: 74 PPPPPPPPP-LPPPPPPPPPDKDDIRLLPSALGVKKRK 110
Score = 31.2 bits (69), Expect = 3.1
Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 10/107 (9%)
Query: 511 RRLMMEQSKKSSLMVARSILNNKLISKKLERYLKGENPFTDSPEEEKEQEEAEGGALDEG 570
R L+ +++ K + +IL K R NPF S A A+
Sbjct: 229 RPLIAKKNPKIPMSKMMTILGAKW------REFSANNPFKGSAAAVAAAAAAAAAAV--- 279
Query: 571 AQGEAAGISEGAEGVPAQPPVPPEPAPGAVSPPPPPPPEEEEEGAVP 617
A+ +A +S P+ PP P P P A PPP + +EG P
Sbjct: 280 AEQVSAAVSSATPIAPSGPPALP-PPPAADIQPPPIRRAKTKEGKGP 325
>gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform
2 [Homo sapiens]
Length = 782
Score = 45.4 bits (106), Expect = 2e-04
Identities = 84/407 (20%), Positives = 161/407 (39%), Gaps = 40/407 (9%)
Query: 256 MKQMRRTWKTWTTADFRTKKKKRKQGGSPDEPDSKATRTDCSDNSDSDNDEGTEGEATEG 315
M + +WK T + +KK+RK+ E ++ R SD+ DS D EGE +
Sbjct: 1 MGDEKDSWKVKTLDEILQEKKRRKE----QEEKAEIKRLKNSDDRDSKRDSLEEGELRDH 56
Query: 316 -LEGTEAVEKGSRVDGEDEEGKEDGREEGKEDPEKGALTT----QDENGQTKRK-----L 365
+E T R D ++ G+ED K + +DE + KR+
Sbjct: 57 RMEITIRNSPYRREDSMEDRGEEDDSLAIKPPQQMSRKEKVHHRKDEKRKEKRRHRSHSA 116
Query: 366 QAGKKSQDKQKKRQRDRMVERIQFVCSLCKYRTFYEDEMASHLDSKFHKEHFKYVGTKLP 425
+ GK ++ K+K+R+ +R + K R +E + + +EH + +L
Sbjct: 117 EGGKHARVKEKEREHERRKRHRE---EQDKARREWERQKRREMA----REHSRRERDRLE 169
Query: 426 KQTADFLQEYVTNKTKKTEELRKTVEDLDGLIHQIYRDQDLTQEIAMEH------FVKKV 479
+ +E K ++ ++ ++ ++ + + ++++ +E++ H + KV
Sbjct: 170 QLERKRERE---RKMREQQKEQREQKERERRAEERRKEREARREVSAHHRTMREDYSDKV 226
Query: 480 EAAHCAACDLFIPMQFGIIQKHLKTMDHNRNRRLMMEQSKKSSLMVARSILNNKLISKKL 539
+A+H + P + + K + + M E+ S L + I +++ +
Sbjct: 227 KASHWSRSPPRPPRERFELGDGRKPVKEEK----MEERDLLSDL---QDISDSERKTSSA 279
Query: 540 ERYLKGENPFTDSPEEEKEQEEAEGGALDEGAQGEAAGISEGAEGVPAQPPVPPEPAPGA 599
E ++ EEE+E+EE EG +E + E E E + E +
Sbjct: 280 ESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEE-EEEEEETGSNSEEASEQSAEE 338
Query: 600 VSPPPPPPPEEEEEGAVPLLGGALQRQIRGIPGLDVEDDEEGGGGAP 646
VS EE E L+ + + G E +EE G G P
Sbjct: 339 VSEEEMSEDEERENENHLLV--VPESRFDRDSGESEEAEEEVGEGTP 383
>gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens]
Length = 589
Score = 44.3 bits (103), Expect = 4e-04
Identities = 58/228 (25%), Positives = 87/228 (38%), Gaps = 25/228 (10%)
Query: 28 DYGYGTWNSGTNRGYEGYGY--GYGYGQDNTTNYGYGMATSHSWEMPSSDTNANTSASGS 85
D G + G + Y YG GYGQ + + GYG T S+ + S+ G
Sbjct: 3 DSGSYGQSGGEQQSYSTYGNPGSQGYGQASQSYSGYGQTTDSSY----GQNYSGYSSYGQ 58
Query: 86 ASADSVLSRINQR---LDMVPHLETDMMQG-GVYGSGGERYDSYESCDSRAVLSERDLY- 140
+ + S NQ+ P+ Q GS G R SY+ D ++D Y
Sbjct: 59 SYSQSYGGYENQKQSSYSQQPYNNQGQQQNMESSGSQGGRAPSYDQPD----YGQQDSYD 114
Query: 141 -RSGYDYSELDPEMEMAYEGQYDAYRDQFRMRGNDTFGPRAQGWARDARSGRPMASGYGR 199
+SGYD + + + Y+ Q+D+Y + ++ + + ++ + R S YG
Sbjct: 115 QQSGYDQHQGSYDEQSNYDQQHDSY-----SQNQQSYHSQRENYSHHTQDDRRDVSRYG- 168
Query: 200 MWEDPMGARGQCMSGASRLPSLFSQNIIPEYGMFQGMRGGGAFPGGSR 247
ED G G G R P G G RGG GG R
Sbjct: 169 --EDNRGYGGSQGGGRGR-GGYDKDGRGPMTGSSGGDRGGFKNFGGHR 213
>gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens]
Length = 592
Score = 44.3 bits (103), Expect = 4e-04
Identities = 59/227 (25%), Positives = 88/227 (38%), Gaps = 20/227 (8%)
Query: 28 DYGYGTWNSGTNRGYEGYGY--GYGYGQDNTTNYGYGMATSHSW-EMPSSDTNANTSASG 84
D G + G + Y YG GYGQ + + GYG T S+ + S ++ S SG
Sbjct: 3 DSGSYGQSGGEQQSYSTYGNPGSQGYGQASQSYSGYGQTTDSSYGQNYSGYSSYGQSQSG 62
Query: 85 -SASADSVLSRINQRLDMVPHLETDMMQG-GVYGSGGERYDSYESCDSRAVLSERDLY-- 140
S S ++ P+ Q GS G R SY+ D ++D Y
Sbjct: 63 YSQSYGGYENQKQSSYSQQPYNNQGQQQNMESSGSQGGRAPSYDQPD----YGQQDSYDQ 118
Query: 141 RSGYDYSELDPEMEMAYEGQYDAYRDQFRMRGNDTFGPRAQGWARDARSGRPMASGYGRM 200
+SGYD + + + Y+ Q+D+Y + ++ + + ++ + R S YG
Sbjct: 119 QSGYDQHQGSYDEQSNYDQQHDSY-----SQNQQSYHSQRENYSHHTQDDRRDVSRYG-- 171
Query: 201 WEDPMGARGQCMSGASRLPSLFSQNIIPEYGMFQGMRGGGAFPGGSR 247
ED G G G R P G G RGG GG R
Sbjct: 172 -EDNRGYGGSQGGGRGR-GGYDKDGRGPMTGSSGGDRGGFKNFGGHR 216
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 44.3 bits (103), Expect = 4e-04
Identities = 39/120 (32%), Positives = 47/120 (39%), Gaps = 31/120 (25%)
Query: 544 KGENPFTDSPEEEKEQEE--AEGGALDEGAQGE---AAGISEGAEGVP------------ 586
K E D EE+KE+EE EG +E A E A E A+ P
Sbjct: 356 KQEQKLDDEEEEKKEEEEKDKEGEEKEERAVAEEMMPAAEKEEAKLPPPPLTPPAPSPPP 415
Query: 587 -------------AQPPVPPEPAPGAVSPPPPPPPEEEEEGAVPLLGGALQRQIRGIPGL 633
PP PP P SPPPPP EE+EE P++ R+ RG P L
Sbjct: 416 PLPPPSTSPPPPLCPPPPPPVSPPPLPSPPPPPAQEEQEESPPPVVPATCSRK-RGRPPL 474
Score = 30.0 bits (66), Expect = 6.9
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 585 VPAQPPVPPEPAPGAVSPPPPPPP 608
+ PPVP EPAP P P PP
Sbjct: 567 ITTSPPVPQEPAPVPSPPRAPTPP 590
>gi|83716024 kinesin family member 21B [Homo sapiens]
Length = 1624
Score = 44.3 bits (103), Expect = 4e-04
Identities = 69/355 (19%), Positives = 127/355 (35%), Gaps = 23/355 (6%)
Query: 240 GAFPGGSRFGFGFGNGMKQMRRTWKTWTTADFRTKKKKRKQGGSPDEPDSKATRTDCSDN 299
GA P FG + M+ + R KKK+ +Q E ++ R
Sbjct: 518 GASPAAPAFGGSPASSMEDASEVIRRAKQDLERLKKKEVRQRRKSPEKEAFKKRAKLQQE 577
Query: 300 SDSDNDEGTEGEATEGLEGTEAVEKGSRVDGEDEEGKEDGREEGKEDPEKGALTTQDENG 359
+ + DE E E + + E+ R D +++ G E+ + DPE+ + Q +
Sbjct: 578 NSEETDENEAEEEEEERDESGCEEEEGREDEDEDSGSEESLVDSDSDPEEKEVNFQADLA 637
Query: 360 QTKRKLQAGKKSQDKQKKRQRDRMVERIQFVCSLCKYRTFYEDEMASHLDSKFHKEHFKY 419
+++ +K D+ + QR + Q+ +E L +K +
Sbjct: 638 DLTCEIEIKQKLIDELENSQRRLQTLKHQY------------EEKLILLQNKIRDTQLER 685
Query: 420 VGTKLPKQTADFLQEYVTNKTKKTEE--LRKTVEDLDGL-IHQIYRDQDLTQEIAMEHFV 476
T + E NK K E LR+ DL L Q + L + E +
Sbjct: 686 DRVLQNLSTMECYTEEKANKIKADYEKRLREMNRDLQKLQAAQKEHARLLKNQSRYEREL 745
Query: 477 KKVEA--AHCAACDLFIPMQFGIIQKHLKTMDHNRNRRL--MMEQSKKSSLMVARSILNN 532
KK++A A + + Q Q+ + ++ RNR + + ++ ++ +
Sbjct: 746 KKLQAEVAEMKKAKVALMKQMREEQQRRRLVETKRNREIAQLKKEQRRQEFQIRALESQK 805
Query: 533 KLISKKLERYLKGENPFTDSPEEEKEQEEAEGG----ALDEGAQGEAAGISEGAE 583
+ L R + + + E+ G LD GA+ A+ S AE
Sbjct: 806 RQQEMVLRRKTQEVSALRRLAKPMSERVAGRAGLKPPMLDSGAEVSASTTSSEAE 860
>gi|23503317 coiled-coil domain containing 96 [Homo sapiens]
Length = 555
Score = 44.3 bits (103), Expect = 4e-04
Identities = 45/114 (39%), Positives = 56/114 (49%), Gaps = 17/114 (14%)
Query: 550 TDSPEEEKEQEEAEGG-ALDEGAQ-------GEAAG-ISEGAEGVPAQP-PVPPEPAP-G 598
++ EEE+EQ ++GG A DE A+ EAAG G G PA+P P P EPA G
Sbjct: 45 SEPEEEEEEQAASQGGTAADEQAEAPKGLTAAEAAGEEGPGEPGRPAEPQPEPEEPAEVG 104
Query: 599 AVSPPPPPP---PE--EEEEGAVPLLGGALQRQIRGIPGLDV-EDDEEGGGGAP 646
A P P P PE E E GA L A +++R L + DEE AP
Sbjct: 105 AEEPAQPEPGAGPEELEAEAGAEELEQAAEGKEVRFQASLPLTRIDEEEAAAAP 158
Score = 31.2 bits (69), Expect = 3.1
Identities = 26/77 (33%), Positives = 30/77 (38%), Gaps = 7/77 (9%)
Query: 569 EGAQGEAAGISEGAEGVPAQPPVPPEPAPGAVSPPPPPPPEEEEEGAVPLLGGALQRQIR 628
EG GE+ + PP PEP G + P EEEEE A G A Q
Sbjct: 14 EGGDGESLAARPSKIKASSGPPTSPEP--GELE---SEPEEEEEEQAASQGGTAADEQAE 68
Query: 629 GIPGLDVED--DEEGGG 643
GL + EEG G
Sbjct: 69 APKGLTAAEAAGEEGPG 85
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 43.9 bits (102), Expect = 5e-04
Identities = 30/82 (36%), Positives = 33/82 (40%), Gaps = 9/82 (10%)
Query: 565 GALDEGAQGEAAGISEGAEGVPAQPPVPPEPAPGAVSPPPPPPPEEEEEGAVPLLGGALQ 624
G+ GA GE G+ A + PP PP PA A PPPPPPP A P G
Sbjct: 49 GSPGGGAGGE--GLGAAAAALLLHPPPPPPPATAAPPPPPPPPP-PPASAAAPASGPPAP 105
Query: 625 RQIRGIPGLDVEDDEEGGGGAP 646
PGL GG P
Sbjct: 106 ------PGLAAGPGPAGGAPTP 121
Score = 30.4 bits (67), Expect = 5.3
Identities = 23/67 (34%), Positives = 24/67 (35%), Gaps = 9/67 (13%)
Query: 564 GGALDEGAQGEAAGI--------SEGAEGVPAQPPVPPEPAPGAVSPPPPPPPEEEEEGA 615
GGA EG AA + P PP PP PA A PP P G
Sbjct: 53 GGAGGEGLGAAAAALLLHPPPPPPPATAAPPPPPPPPPPPASAAAPASGPPAPPGLAAGP 112
Query: 616 VPLLGGA 622
P GGA
Sbjct: 113 GP-AGGA 118
>gi|21361639 DIPB protein [Homo sapiens]
Length = 344
Score = 43.9 bits (102), Expect = 5e-04
Identities = 42/201 (20%), Positives = 82/201 (40%), Gaps = 39/201 (19%)
Query: 280 QGGSPDEPDSKATRTDCSDNSDSDNDEGTEGEATEGLEGTEAVEKGSRVDGE-DEEGKED 338
+G +E + K + + +++ G E E+ E E E E + E DEE +ED
Sbjct: 74 EGAGKEEAEVKVEQ-----EREIESEAGEESESEEESESEEESETEEESEDESDEESEED 128
Query: 339 GREEGKEDPEKGALTTQDENGQTKRKLQAGKKSQ-DKQKKRQRDRMVER----------- 386
EE +++ E A E G+++ + + +S+ D + + + +R+ +R
Sbjct: 129 SEEEMEDEQESEAEEDNQEEGESEAEGETEAESEFDPEIEMEAERVAKRKCPDHGLDLST 188
Query: 387 -----IQFVCSLCKYRTFYEDEMASHLDSKFHKEHFKYVG----------------TKLP 425
Q +C LC ++ S LD F + K G + P
Sbjct: 189 YCQEDRQLICVLCPVIGAHQGHQLSTLDEAFEELRSKDSGGLKAAMIELVERLKFKSSDP 248
Query: 426 KQTADFLQEYVTNKTKKTEEL 446
K T D ++ ++ + KK +++
Sbjct: 249 KVTRDQMKMFIQQEFKKVQKV 269
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 43.9 bits (102), Expect = 5e-04
Identities = 74/393 (18%), Positives = 139/393 (35%), Gaps = 65/393 (16%)
Query: 254 NGMKQMRRTWKTWTTADFRTKKKKRKQGGSPDEPDSKATRTDCSDNSDSDNDEGTEGEAT 313
N K + +T D + KK S D D+K N D+ + + T
Sbjct: 271 NNSKNYSLKYTKYTKKDTKKNAKKSSDAESEDSKDAKKDSKKVKKNVKKDDKKKDVKKDT 330
Query: 314 EGLEGTEAVEKGSRVDGEDEEGKEDGREEGKEDPEKGALTTQDENGQTK------RKLQA 367
E + K R D + ++ K+ +++ K+D +K +T E+G K R L+
Sbjct: 331 ESTDAESGDSKDERKDTKKDK-KKLKKDDKKKDTKKYPESTDTESGDAKDARNDSRNLKK 389
Query: 368 GKKSQDKQKKRQRDRMVERIQFVCSLCKYRTFYEDEMASHLDSKFHKEHFKYVGTKLPKQ 427
K+ DK+K ++ + T E E+ S K K+ K T K
Sbjct: 390 ASKNDDKKKDAKK-------------ITFSTDSESELESKESQKDEKKDKKDSKTDNKK- 435
Query: 428 TADFLQEYVTNKTKKTEELRKTVEDLDGLIHQIYRDQDLTQEIAMEHFVKKVEAAHCAAC 487
K EE + G + +D+ ++ + + KK + +
Sbjct: 436 -----------SVKNDEESTDADSEPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAEST 484
Query: 488 DLFIPMQFGIIQKHLKTMDHNRNRRLMMEQSKKSSLMVARSILNNKLISKKLERYLKGEN 547
++ ++ +KH K + +++ + + ++K + + K +KG +
Sbjct: 485 EMESDLELKKDKKHSK--EKKGSKKDIKKDARKDTESTDAEFDESSKTGFKTSTKIKGSD 542
Query: 548 PFTD----SPEEEKEQEEAEGGALDEGAQG----------------EAAGISEGAEGVPA 587
++ P +K+ +E++G + + +G G VP
Sbjct: 543 TESEESLYKPGAKKKIDESDGTSANSKMEGLESKRGFRMSSKKTTFNEKGEKASTGRVPP 602
Query: 588 QPPVPPEPA--PGAVSPP---------PPPPPE 609
PP PA P SP PPPPP+
Sbjct: 603 SREKPPLPACEPSLPSPKVRRLCWCKMPPPPPK 635
>gi|7706687 Enah/Vasp-like [Homo sapiens]
Length = 418
Score = 43.9 bits (102), Expect = 5e-04
Identities = 28/104 (26%), Positives = 38/104 (36%), Gaps = 18/104 (17%)
Query: 554 EEEKEQEEAEGGALDEGAQGEAAGISEGAEGVPAQPPVPPEPAPGAVSPPPPPP------ 607
E + + A G L G AA G P PP P P P +PPPPPP
Sbjct: 153 ESLERRTSATGPILPPGHPSSAASAPVSCSGPPPPPPPPVPPPPTGATPPPPPPLPAGGA 212
Query: 608 -----PEEEEEGAVPLLGGALQRQIRGIPGLDVEDDEEGGGGAP 646
E G + GA R+++ ++ GG +P
Sbjct: 213 QGSSHDESSMSGLAAAIAGAKLRRVQ-------RPEDASGGSSP 249
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.131 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,697,832
Number of Sequences: 37866
Number of extensions: 1752108
Number of successful extensions: 33680
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 926
Number of HSP's that attempted gapping in prelim test: 17101
Number of HSP's gapped (non-prelim): 11685
length of query: 646
length of database: 18,247,518
effective HSP length: 109
effective length of query: 537
effective length of database: 14,120,124
effective search space: 7582506588
effective search space used: 7582506588
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.