Guide to the Human Genome
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Search of human proteins with 49472828

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|49472828 natural killer cell-specific antigen KLIP1 [Homo
sapiens]
         (350 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|49472828 natural killer cell-specific antigen KLIP1 [Homo sap...   698   0.0  
gi|10092643 Yip1 domain family, member 1 [Homo sapiens]                39   0.007
gi|13128976 Yip1 domain family, member 2 [Homo sapiens]                36   0.045
gi|56711324 HAUS augmin-like complex, subunit 3 [Homo sapiens]         33   0.38 
gi|9966781 claudin 2 [Homo sapiens]                                    32   0.65 
gi|14150076 Yip1 domain family, member 4 [Homo sapiens]                32   1.1  
gi|4557511 death-associated protein kinase 3 [Homo sapiens]            32   1.1  
gi|156071452 nardilysin isoform b [Homo sapiens]                       31   1.4  
gi|156071450 nardilysin isoform a [Homo sapiens]                       31   1.4  
gi|221139764 PHD and ring finger domains 1 [Homo sapiens]              31   1.4  
gi|166795264 AE binding protein 2 isoform b [Homo sapiens]             31   1.9  
gi|166795262 AE binding protein 2 isoform a [Homo sapiens]             31   1.9  
gi|113426528 PREDICTED: similar to hCG2042536 [Homo sapiens]           30   2.5  
gi|113426210 PREDICTED: similar to hCG2042536 [Homo sapiens]           30   2.5  
gi|239753283 PREDICTED: hypothetical protein [Homo sapiens]            30   4.2  
gi|6912550 olfactory receptor, family 10, subfamily J, member 1 ...    30   4.2  
gi|21361468 nucleolar protein 11 [Homo sapiens]                        30   4.2  
gi|53793690 olfactory receptor, family 2, subfamily T, member 6 ...    30   4.2  
gi|160420295 hypothetical protein LOC85459 [Homo sapiens]              30   4.2  
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]    29   5.5  
gi|119709822 castor homolog 1, zinc finger isoform b [Homo sapiens]    29   5.5  
gi|31543091 MAK16 homolog [Homo sapiens]                               29   5.5  
gi|13540539 olfactory receptor, family 51, subfamily E, member 2...    29   5.5  
gi|49472835 bridging integrator 2 [Homo sapiens]                       29   5.5  
gi|55741661 hypothetical protein LOC57653 [Homo sapiens]               29   7.2  
gi|4827008 solute carrier family 15 (oligopeptide transporter), ...    29   7.2  
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)...    29   7.2  
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)...    29   7.2  
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)...    29   7.2  
gi|110347463 human immunodeficiency virus type I enhancer bindin...    29   7.2  

>gi|49472828 natural killer cell-specific antigen KLIP1 [Homo
           sapiens]
          Length = 350

 Score =  698 bits (1801), Expect = 0.0
 Identities = 350/350 (100%), Positives = 350/350 (100%)

Query: 1   MATTAAPAGGARNGAGPEWGGFEENIQGGGSAVIDMENMDDTSGSSFEDMGELHQRLREE 60
           MATTAAPAGGARNGAGPEWGGFEENIQGGGSAVIDMENMDDTSGSSFEDMGELHQRLREE
Sbjct: 1   MATTAAPAGGARNGAGPEWGGFEENIQGGGSAVIDMENMDDTSGSSFEDMGELHQRLREE 60

Query: 61  EVDADAADAAAAEEEDGEFLGMKGFKGQLSRQVADQMWQAGKRQASRAFSLYANIDILRP 120
           EVDADAADAAAAEEEDGEFLGMKGFKGQLSRQVADQMWQAGKRQASRAFSLYANIDILRP
Sbjct: 61  EVDADAADAAAAEEEDGEFLGMKGFKGQLSRQVADQMWQAGKRQASRAFSLYANIDILRP 120

Query: 121 YFDVEPAQVRSRLLESMIPIKMVNFPQKIAGELYGPLMLVFTLVAILLHGMKTSDTIIRE 180
           YFDVEPAQVRSRLLESMIPIKMVNFPQKIAGELYGPLMLVFTLVAILLHGMKTSDTIIRE
Sbjct: 121 YFDVEPAQVRSRLLESMIPIKMVNFPQKIAGELYGPLMLVFTLVAILLHGMKTSDTIIRE 180

Query: 181 GTLMGTAIGTCFGYWLGVSSFIYFLAYLCNAQITMLQMLALLGYGLFGHCIVLFITYNIH 240
           GTLMGTAIGTCFGYWLGVSSFIYFLAYLCNAQITMLQMLALLGYGLFGHCIVLFITYNIH
Sbjct: 181 GTLMGTAIGTCFGYWLGVSSFIYFLAYLCNAQITMLQMLALLGYGLFGHCIVLFITYNIH 240

Query: 241 LHALFYLFWLLVGGLSTLRMVAVLVSRTVGPTQRLLLCGTLAALHMLFLLYLHFAYHKVV 300
           LHALFYLFWLLVGGLSTLRMVAVLVSRTVGPTQRLLLCGTLAALHMLFLLYLHFAYHKVV
Sbjct: 241 LHALFYLFWLLVGGLSTLRMVAVLVSRTVGPTQRLLLCGTLAALHMLFLLYLHFAYHKVV 300

Query: 301 EGILDTLEGPNIPPIQRVPRDIPAMLPAARLPTTVLNATAKAVAVTLQSH 350
           EGILDTLEGPNIPPIQRVPRDIPAMLPAARLPTTVLNATAKAVAVTLQSH
Sbjct: 301 EGILDTLEGPNIPPIQRVPRDIPAMLPAARLPTTVLNATAKAVAVTLQSH 350


>gi|10092643 Yip1 domain family, member 1 [Homo sapiens]
          Length = 306

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 55/286 (19%)

Query: 30  GSAVIDMENMDDTSGSSFEDMGELHQRLREEEVDADAADAAAAEEEDGEFLGMKGF-KGQ 88
           G+A   +    D +  + ED GE  +           +   +  EED E LG     K +
Sbjct: 13  GNAATSLTANPDATTVNIEDPGETPKH-------QPGSPRGSGREEDDELLGNDDSDKTE 65

Query: 89  LSRQVADQMWQAGKRQASRAFSLYANIDILRPYFDVEPAQVRSRLLESMIPIKMVNFPQ- 147
           L          AG++++S  ++     +  + +FDV+  QV  R+  S++PI   NF + 
Sbjct: 66  LL---------AGQKKSSPFWTF----EYYQTFFDVDTYQVFDRIKGSLLPIPGKNFVRL 112

Query: 148 --KIAGELYGPLMLVFTLV-AILLHGMKTSDTI---------IREGTLMGTAIGTCFGY- 194
             +   +LYGP  +  TLV AI + G  ++  I         + E   +  A    + Y 
Sbjct: 113 YIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFRKVSIAATIIYAYA 172

Query: 195 WLGVSSFIYFLAYLCNAQI------TMLQMLALLGYGLFGHCIVLFITYNIHLHALFYLF 248
           WL   +   FL +  N+++      + L+++ + GY LF + I   I + I   A+ ++ 
Sbjct: 173 WLVPLALWGFLMWR-NSKVMNIVSYSFLEIVCVYGYSLFIY-IPTAILWIIPQKAVRWIL 230

Query: 249 WLLVGGLSTLRMVAVLVSRTVGPTQR-------LLLCGTLAALHML 287
            ++  G+S       L++ T  P  R       L    T+  LHML
Sbjct: 231 VMIALGIS-----GSLLAMTFWPAVREDNRRVALATIVTIVLLHML 271


>gi|13128976 Yip1 domain family, member 2 [Homo sapiens]
          Length = 316

 Score = 36.2 bits (82), Expect = 0.045
 Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 26/193 (13%)

Query: 121 YFDVEPAQVRSRLLESMIPIKMVNFPQ---KIAGELYGPLMLVFTLVAI--------LLH 169
           +FDV+ +QV  R+  S++P    NF +   +   +LYGP  +  TL  +        L+ 
Sbjct: 86  FFDVDTSQVLDRIKGSLLPRPGHNFVRHHLRNRPDLYGPFWICATLAFVLAVTGNLTLVL 145

Query: 170 GMKTSDTI-----IREGTLMGTAIGTCFGYWLGVSSFIYFLAYLCNAQ-----ITMLQML 219
             +   +I       + T+ G +I  C+  WL   +   FL +    Q      T L+ +
Sbjct: 146 AQRRDPSIHYSPQFHKVTVAGISI-YCYA-WLVPLALWGFLRWRKGVQERMGPYTFLETV 203

Query: 220 ALLGYGLFGHCIVLFITYNIHLHALFYLFWLLVGGLSTLRMVAVL--VSRTVGPTQRLLL 277
            + GY LF   I + + + I +  L +LF  L  GLS   +V  L  V R        +L
Sbjct: 204 CIYGYSLFVF-IPMVVLWLIPVPWLQWLFGALALGLSAAGLVFTLWPVVREDTRLVATVL 262

Query: 278 CGTLAALHMLFLL 290
              +  LH L  +
Sbjct: 263 LSVVVLLHALLAM 275


>gi|56711324 HAUS augmin-like complex, subunit 3 [Homo sapiens]
          Length = 603

 Score = 33.1 bits (74), Expect = 0.38
 Identities = 26/120 (21%), Positives = 54/120 (45%), Gaps = 8/120 (6%)

Query: 23  EENIQGGGSAVIDMENMDDTSGSSFEDMGELHQRLREEEVDADAADAAAAEEEDGEFLGM 82
           EE++    S  +D EN+D    S   ++     +L +E          A   E+ + L M
Sbjct: 294 EESLHSLTSKAVDKENLDAKISSLTSEI----MKLEKEVTQIKDRSLPAVVRENAQLLNM 349

Query: 83  KGFKGQLSRQVADQMWQAGKRQ--ASRAFSLYANIDILRPYFDVEPAQVRS--RLLESMI 138
              KG    Q+A Q +   +++   ++     A+ ++L+  +++E  + R   R LE+++
Sbjct: 350 PVVKGDFDLQIAKQDYYTARQELVLNQLIKQKASFELLQLSYEIELRKHRDIYRQLENLV 409


>gi|9966781 claudin 2 [Homo sapiens]
          Length = 230

 Score = 32.3 bits (72), Expect = 0.65
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 142 MVNFPQKIAGELYGPLMLVFTLVAILLHGMKTSDTIIREGTLMGTAIGTCFGYWL 196
           M +   ++ G + G L L+ TLVA+LL   KTS  +   G  + TA+G   G W+
Sbjct: 1   MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYV---GASIVTAVGFSKGLWM 52


>gi|14150076 Yip1 domain family, member 4 [Homo sapiens]
          Length = 244

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 37/182 (20%), Positives = 73/182 (40%), Gaps = 36/182 (19%)

Query: 123 DVEPAQVRSRLLESMIPIKMVNFPQKIAGE---LYGPLMLVFTLVAILLHGMKTSDTIIR 179
           D++   +  ++   ++P+  + F +++  +    +GPL +V     I L+G         
Sbjct: 82  DIDLKDIYYKIRCVLMPMPSLGFNRQVVRDNPDFWGPLAVVLFFSMISLYGQFR------ 135

Query: 180 EGTLMGTAIGTCFGYWLGVSSFIYFLAYLCNAQITMLQMLALLGYGLFGHCI---VLFIT 236
                   +      W+  S  I+ LA +   ++   Q+L ++GY L    +   VL + 
Sbjct: 136 -------VVSWIITIWIFGSLTIFLLARVLGGEVAYGQVLGVIGYSLLPLIVIAPVLLVV 188

Query: 237 YNIH----LHALFYLFWLLVGGLSTLRMVAVLVSRTVGPTQRLLLCGTLAALHMLFLLYL 292
            +      L  LF +FW      S      +LV       + LL       ++ +FLLY+
Sbjct: 189 GSFEVVSTLIKLFGVFWAAYSAAS------LLVGEEFKTKKPLL-------IYPIFLLYI 235

Query: 293 HF 294
           +F
Sbjct: 236 YF 237


>gi|4557511 death-associated protein kinase 3 [Homo sapiens]
          Length = 454

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 16/44 (36%), Positives = 24/44 (54%)

Query: 48  EDMGELHQRLREEEVDADAADAAAAEEEDGEFLGMKGFKGQLSR 91
           + +G+  +RLR+E +  +A    A EE  G  LG  G K + SR
Sbjct: 372 DSLGQDLRRLRQELLKTEALKRQAQEEAKGALLGTSGLKRRFSR 415


>gi|156071452 nardilysin isoform b [Homo sapiens]
          Length = 1151

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 4/55 (7%)

Query: 26  IQGGGSAVI--DMENMDDTSGSSFEDMGELHQRLREEEVDADAADAAAAEEEDGE 78
           +Q G  A++  D+ NM+  +G++ +D  E  + + EEE D D    A  E++D E
Sbjct: 118 LQNGLQALLISDLSNMEGKTGNTTDD--EEEEEVEEEEEDDDEDSGAEIEDDDEE 170


>gi|156071450 nardilysin isoform a [Homo sapiens]
          Length = 1219

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 4/55 (7%)

Query: 26  IQGGGSAVI--DMENMDDTSGSSFEDMGELHQRLREEEVDADAADAAAAEEEDGE 78
           +Q G  A++  D+ NM+  +G++ +D  E  + + EEE D D    A  E++D E
Sbjct: 118 LQNGLQALLISDLSNMEGKTGNTTDD--EEEEEVEEEEEDDDEDSGAEIEDDDEE 170


>gi|221139764 PHD and ring finger domains 1 [Homo sapiens]
          Length = 1648

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 7/90 (7%)

Query: 1  MATTAAPAGGARNGAGPEWGGFEENIQGGGSAVIDMENMDDTSGSSFEDMGELHQRLREE 60
          +A +  P G  + G     G FEE+  G      D  + +   G+  ED G        E
Sbjct: 10 VARSPGPDGHPQVGPADPAGDFEESSVGSSGDSGDDSDSEHGDGTDGEDEG------ASE 63

Query: 61 EVDADAADAAAAEEEDGE-FLGMKGFKGQL 89
          E D +    +   E+DGE  L + G +G+L
Sbjct: 64 EEDLEDRSGSEDSEDDGETLLEVAGTQGKL 93


>gi|166795264 AE binding protein 2 isoform b [Homo sapiens]
          Length = 517

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 9/79 (11%)

Query: 9   GGARNGAGPEWGGFEENIQGGGSAVIDMENMDDTSGSSFEDMGELHQRLREEEVDADAAD 68
           GG+  G G   GG      GGG A    E M + S  S    GE      ++E + D + 
Sbjct: 61  GGSGGGGGGGGGGV-----GGGEA----ETMSEPSPESASQAGEDEDEEEDDEEEEDESS 111

Query: 69  AAAAEEEDGEFLGMKGFKG 87
           ++   EE+     + G  G
Sbjct: 112 SSGGGEEESSAESLVGSSG 130


>gi|166795262 AE binding protein 2 isoform a [Homo sapiens]
          Length = 503

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 9/79 (11%)

Query: 9   GGARNGAGPEWGGFEENIQGGGSAVIDMENMDDTSGSSFEDMGELHQRLREEEVDADAAD 68
           GG+  G G   GG      GGG A    E M + S  S    GE      ++E + D + 
Sbjct: 61  GGSGGGGGGGGGGV-----GGGEA----ETMSEPSPESASQAGEDEDEEEDDEEEEDESS 111

Query: 69  AAAAEEEDGEFLGMKGFKG 87
           ++   EE+     + G  G
Sbjct: 112 SSGGGEEESSAESLVGSSG 130


>gi|113426528 PREDICTED: similar to hCG2042536 [Homo sapiens]
          Length = 847

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 16/94 (17%)

Query: 6   APAGGARNGAGP--EWG---------GFEENIQGGGSAVIDMENMDDTSGSSFEDMGELH 54
           A AGG R GAG   EW          G ++   GGG  +      ++T  S   D+ EL 
Sbjct: 123 AGAGGRRGGAGAPREWNVAYALGSATGDDDEDDGGGPRLRGAA--EETRDS---DLSELS 177

Query: 55  QRLREEEVDADAADAAAAEEEDGEFLGMKGFKGQ 88
                 E D  A DAA+  ++     G +G +GQ
Sbjct: 178 DTDPLSEPDPPARDAASPHQDGAPGPGPRGGRGQ 211


>gi|113426210 PREDICTED: similar to hCG2042536 [Homo sapiens]
          Length = 847

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 16/94 (17%)

Query: 6   APAGGARNGAGP--EWG---------GFEENIQGGGSAVIDMENMDDTSGSSFEDMGELH 54
           A AGG R GAG   EW          G ++   GGG  +      ++T  S   D+ EL 
Sbjct: 123 AGAGGRRGGAGAPREWNVAYALGSATGDDDEDDGGGPRLRGAA--EETRDS---DLSELS 177

Query: 55  QRLREEEVDADAADAAAAEEEDGEFLGMKGFKGQ 88
                 E D  A DAA+  ++     G +G +GQ
Sbjct: 178 DTDPLSEPDPPARDAASPHQDGAPGPGPRGGRGQ 211


>gi|239753283 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 131

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 84  GFKGQLSRQVADQMWQAGKRQASRAFSLYANIDILRPYFDVEPAQVRSRLLESMIPIKMV 143
           G  G+L RQ   +   AG R    A SL A++   R ++ V PAQ  S   +S   + + 
Sbjct: 27  GLAGRLGRQCVSRQAAAGSRGPLLAGSLLAHLAEQRQWWLVPPAQPPS-YRQSPKSMSLR 85

Query: 144 NFPQK 148
           N PQ+
Sbjct: 86  NLPQR 90


>gi|6912550 olfactory receptor, family 10, subfamily J, member 1
           [Homo sapiens]
          Length = 320

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 7/84 (8%)

Query: 212 QITMLQM-LALLGYGLFGHCIVL-FITYNIHLHALFYLFWLLVGGLSTLRMVAVL---VS 266
           QIT+  + LAL    L G+ I++  I  ++HLH   Y F  ++    T+  + +L   +S
Sbjct: 35  QITLFGVFLALYILTLAGNIIIVTIIRIDLHLHTPMYFFLSMLSTSETVYTLVILPRMLS 94

Query: 267 RTVGPTQRLLLCGTLAALHMLFLL 290
             VG +Q + L G   A  M F +
Sbjct: 95  SLVGMSQPMSLAG--CATQMFFFV 116


>gi|21361468 nucleolar protein 11 [Homo sapiens]
          Length = 719

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)

Query: 287 LFLLYLHFAYHKVVEGILDTLEGPNIPPIQRVPRDIPAMLPAARLPTTVLNATAKAVAVT 346
           LFL YL+F Y K  E    TL G + P + ++  D   +L  A     V+   AK + + 
Sbjct: 615 LFLKYLYFLYLKCSENATMTLPGIHPPTLNQI-MDWICLLLDANFTVVVMMPEAKRLLIN 673

Query: 347 L 347
           L
Sbjct: 674 L 674


>gi|53793690 olfactory receptor, family 2, subfamily T, member 6
           [Homo sapiens]
          Length = 308

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 25/101 (24%)

Query: 172 KTSDTIIREGTLMGTAI-GTCFGYWLGVSSFIYFLAYLCNAQITMLQMLALLGYGLFGHC 230
           + ++T+ R  TLMG      C G++ GV   ++F+A + N                    
Sbjct: 3   ENNETLTRGFTLMGLFTHNKCSGFFFGVICAVFFMAMIANG------------------V 44

Query: 231 IVLFITYNIHLHALFYLFWLLVGGLSTLRMVAVLVSRTVGP 271
           ++  I  + HLH   Y        LS L ++  L   T+ P
Sbjct: 45  MIFLINIDPHLHTPMYFL------LSHLSVIDTLYISTIVP 79


>gi|160420295 hypothetical protein LOC85459 [Homo sapiens]
          Length = 2601

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 14/40 (35%), Positives = 23/40 (57%)

Query: 36  MENMDDTSGSSFEDMGELHQRLREEEVDADAADAAAAEEE 75
           ++N++    +S   MGE H++ +E E D DA    AAE +
Sbjct: 79  IQNLEKLYLASLRSMGEGHRQAKENEPDLDALAQRAAERK 118


>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
          Length = 1759

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 310 PNIPPIQRVPRDIPAMLPAARLPTTVLNATAKAVAVTLQSH 350
           P+    +RV +++   LP  RLP++  +   KA  + L SH
Sbjct: 257 PSTKTEERVGKEVVGTLPGLRLPSSTAHLETKATILPLPSH 297


>gi|119709822 castor homolog 1, zinc finger isoform b [Homo sapiens]
          Length = 1166

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 13/41 (31%), Positives = 22/41 (53%)

Query: 310 PNIPPIQRVPRDIPAMLPAARLPTTVLNATAKAVAVTLQSH 350
           P+    +RV +++   LP  RLP++  +   KA  + L SH
Sbjct: 257 PSTKTEERVGKEVVGTLPGLRLPSSTAHLETKATILPLPSH 297


>gi|31543091 MAK16 homolog [Homo sapiens]
          Length = 300

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 19/75 (25%), Positives = 36/75 (48%)

Query: 35  DMENMDDTSGSSFEDMGELHQRLREEEVDADAADAAAAEEEDGEFLGMKGFKGQLSRQVA 94
           D ++ +D     F + GE+ +    +  D D  DA++ E++DG+    +  +  LS +  
Sbjct: 208 DDDDEEDVGKREFVEDGEVDESDISDFEDMDKLDASSDEDQDGKSSSEEEEEKALSAKHK 267

Query: 95  DQMWQAGKRQASRAF 109
            +M   G  Q  RA+
Sbjct: 268 GKMPLRGPLQRKRAY 282


>gi|13540539 olfactory receptor, family 51, subfamily E, member 2
           [Homo sapiens]
          Length = 320

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 5/52 (9%)

Query: 218 MLALLGYGLFGHCIVLFITYNIH-LHALFYLFWLLVG----GLSTLRMVAVL 264
           +L++    +FG+CIV+FI      LHA  YLF  ++      LST  M  +L
Sbjct: 30  LLSMYVVAMFGNCIVVFIVRTERSLHAPMYLFLCMLAAIDLALSTSTMPKIL 81


>gi|49472835 bridging integrator 2 [Homo sapiens]
          Length = 565

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 10/29 (34%), Positives = 22/29 (75%)

Query: 48  EDMGELHQRLREEEVDADAADAAAAEEED 76
           ED  E+ + L EEE++ + ++A+++EE++
Sbjct: 307 EDNSEIKELLEEEEIEKEGSEASSSEEDE 335


>gi|55741661 hypothetical protein LOC57653 [Homo sapiens]
          Length = 1646

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 23  EENIQGGGSAVIDMENMDDTSGSSFEDMGELHQRLREEEVDADAADAAAAEEEDGE 78
           EEN++G G    + E  D+      E+  +L +   E+E   +    +  EEED E
Sbjct: 893 EENVKGQGEKKEESEEEDEKEEEEEEE--KLEEEKEEKEAQEEQESLSVGEEEDKE 946


>gi|4827008 solute carrier family 15 (oligopeptide transporter),
           member 1 [Homo sapiens]
          Length = 708

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 16/120 (13%)

Query: 80  LGMKGFKGQLSRQVADQMWQAGKRQASRAFSLYANIDILRPYFDVEPAQVRSRLLESMIP 139
           LG  G K  +S    DQ  +  ++Q +R FS++        Y  +    + S ++  M+ 
Sbjct: 134 LGTGGIKPCVSAFGGDQFEEGQEKQRNRFFSIF--------YLAINAGSLLSTIITPMLR 185

Query: 140 IKMVNFPQK-----IAGELYGPLMLVFTLVAILLHGMKTSDTIIREGTLMGTAIGTCFGY 194
           ++      K     +A  +   LM V  +V +L  GM        +G +MG  +  C G+
Sbjct: 186 VQQCGIHSKQACYPLAFGVPAALMAVALIVFVLGSGMYKK--FKPQGNIMG-KVAKCIGF 242


>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
            [Homo sapiens]
          Length = 2004

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 14/29 (48%), Positives = 18/29 (62%)

Query: 48   EDMGELHQRLREEEVDADAADAAAAEEED 76
            EDM    +R  EEE+ A+A +A   EEED
Sbjct: 1215 EDMPLPEERKEEEEMQAEAEEAEEGEEED 1243


>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
            [Homo sapiens]
          Length = 2004

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 14/29 (48%), Positives = 18/29 (62%)

Query: 48   EDMGELHQRLREEEVDADAADAAAAEEED 76
            EDM    +R  EEE+ A+A +A   EEED
Sbjct: 1215 EDMPLPEERKEEEEMQAEAEEAEEGEEED 1243


>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
            [Homo sapiens]
          Length = 2004

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 14/29 (48%), Positives = 18/29 (62%)

Query: 48   EDMGELHQRLREEEVDADAADAAAAEEED 76
            EDM    +R  EEE+ A+A +A   EEED
Sbjct: 1215 EDMPLPEERKEEEEMQAEAEEAEEGEEED 1243


>gi|110347463 human immunodeficiency virus type I enhancer binding
            protein 2 [Homo sapiens]
          Length = 2446

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 34   IDMENMDDTSGSSFEDMGELHQRLREEEVDADAAD--AAAAEEEDGE 78
            + M ++DDT     E++ +LH+   +  + + + D   + AEE DGE
Sbjct: 1860 VSMTSVDDTETEEAENLEDLHKAAEKHSMSSISTDHQFSDAEESDGE 1906


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.139    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,442,209
Number of Sequences: 37866
Number of extensions: 526313
Number of successful extensions: 2467
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 2439
Number of HSP's gapped (non-prelim): 54
length of query: 350
length of database: 18,247,518
effective HSP length: 103
effective length of query: 247
effective length of database: 14,347,320
effective search space: 3543788040
effective search space used: 3543788040
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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