Guide to the Human Genome
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Name: NFKBIB Sequence: fasta or formatted (306aa) NCBI GI: 48928017
Description:

nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta isoform b

Referenced in:

NF-kappaB Pathway
Ras

Other entries for this name:
alt prot [356aa] nuclear factor of kappa light polypeptide gene enhancer in B-cell...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.4         41           2
 C cysteine            2.0          6           1
 D aspartate           5.9         18           1
 E glutamate           8.8         27           4
 F phenylalanine       0.3          1           1
 G glycine             9.5         29           2
 H histidine           3.3         10           1
 I isoleucine          1.0          3           1
 K lysine              2.0          6           1
 L leucine            11.1         34           3
 M methionine          2.0          6           1
 N asparagine          2.0          6           1
 P proline             7.8         24           2
 Q glutamine           2.9          9           1
 R arginine            8.5         26           2
 S serine              6.9         21           4
 T threonine           5.2         16           1
 V valine              3.9         12           1
 W tryptophan          1.6          5           1
 Y tyrosine            2.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear factor of kappa light polypeptide gene enhan... 
NFKBIB                0.784   nuclear factor of kappa light polypeptide gene enhan...
NFKBIE                0.146   nuclear factor of kappa light polypeptide gene enhan...
BCL3                  0.136   B-cell CLL/lymphoma 3 
NFKB2                 0.128   nuclear factor of kappa light polypeptide gene enha...
NFKB2                 0.128   nuclear factor of kappa light polypeptide gene enha...
NFKB2                 0.128   nuclear factor of kappa light polypeptide gene enha...
NFKBIA                0.121   nuclear factor of kappa light polypeptide gene enhan...
NFKB1                 0.095   nuclear factor kappa-B, subunit 1 
ANK3                  0.083   ankyrin 3 isoform 1 
ANK2                  0.080   ankyrin 2 isoform 3 
ANK2                  0.080   ankyrin 2 isoform 2 
ANK2                  0.080   ankyrin 2 isoform 1 
ANK1                  0.078   ankyrin 1 isoform 9 
ANK1                  0.078   ankyrin 1 isoform 1 
ANK1                  0.078   ankyrin 1 isoform 3 
ANK1                  0.078   ankyrin 1 isoform 2 
ANK1                  0.078   ankyrin 1 isoform 4 
ASB10                 0.076   ankyrin repeat and SOCS box-containing 10 isoform 2...
ASB10                 0.076   ankyrin repeat and SOCS box-containing 10 isoform 1...
ASB10                 0.076   ankyrin repeat and SOCS box-containing 10 isoform 3...
ANKK1                 0.075   ankyrin repeat and kinase domain containing 1 
ANKRD52               0.075   ankyrin repeat domain 52 
PLA2G6                0.073   phospholipase A2, group VI isoform b 
PLA2G6                0.073   phospholipase A2, group VI isoform a 
RAI14                 0.070   retinoic acid induced 14 isoform b 
RAI14                 0.068   retinoic acid induced 14 isoform d 
NOTCH4                0.066   notch4 preproprotein 
RAI14                 0.066   retinoic acid induced 14 isoform c 
RAI14                 0.066   retinoic acid induced 14 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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