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Search of human proteins with 4885665
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens]
(193 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens] 387 e-108
gi|55743094 achaete-scute complex homolog 1 [Homo sapiens] 143 1e-34
gi|239752994 PREDICTED: achaete-scute complex homolog 5 (Drosoph... 88 5e-18
gi|239747548 PREDICTED: achaete-scute complex homolog 5 (Drosoph... 88 5e-18
gi|239741422 PREDICTED: achaete-scute complex homolog 5 [Homo sa... 88 5e-18
gi|206597481 achaete-scute complex-like 4 [Homo sapiens] 77 9e-15
gi|29126247 basic helix-loop-helix family, member a15 [Homo sapi... 67 9e-12
gi|10190680 ASCL3 [Homo sapiens] 67 9e-12
gi|38455396 neurogenin 1 [Homo sapiens] 60 2e-09
gi|68989258 neurogenin 3 [Homo sapiens] 60 2e-09
gi|21553337 atonal homolog 7 [Homo sapiens] 60 2e-09
gi|31077092 neurogenin 2 [Homo sapiens] 60 2e-09
gi|30039710 pancreas specific transcription factor, 1a [Homo sap... 58 6e-09
gi|239756681 PREDICTED: basic helix-loop-helix family, member a9... 56 2e-08
gi|239751178 PREDICTED: basic helix-loop-helix family, member a9... 56 2e-08
gi|239745666 PREDICTED: basic helix-loop-helix family, member a9... 56 2e-08
gi|148922889 scleraxis homolog B [Homo sapiens] 55 5e-08
gi|4885075 atonal homolog 1 [Homo sapiens] 55 5e-08
gi|186972126 scleraxis homolog A [Homo sapiens] 55 5e-08
gi|226498192 atonal homolog 8 [Homo sapiens] 53 1e-07
gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo sapi... 53 1e-07
gi|12545384 basic helix-loop-helix transcription factor HAND2 [H... 52 2e-07
gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens] 52 3e-07
gi|23111009 myogenic differentiation 1 [Homo sapiens] 50 9e-07
gi|48255909 basic helix-loop-helix transcription factor 15 [Homo... 50 9e-07
gi|9945318 MAX binding protein [Homo sapiens] 48 5e-06
gi|17978475 oligodendrocyte lineage transcription factor 2 [Homo... 48 6e-06
gi|5031943 nescient helix loop helix 1 [Homo sapiens] 48 6e-06
gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens] 47 8e-06
gi|4505299 myogenic factor 6 [Homo sapiens] 47 1e-05
>gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens]
Length = 193
Score = 387 bits (994), Expect = e-108
Identities = 193/193 (100%), Positives = 193/193 (100%)
Query: 1 MDGGTLPRSAPPAPPVPVGCAARRRPASPELLRCSRRRRPATAETGGGAAAVARRNERER 60
MDGGTLPRSAPPAPPVPVGCAARRRPASPELLRCSRRRRPATAETGGGAAAVARRNERER
Sbjct: 1 MDGGTLPRSAPPAPPVPVGCAARRRPASPELLRCSRRRRPATAETGGGAAAVARRNERER 60
Query: 61 NRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRLLAEHDAVRNALAGGL 120
NRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRLLAEHDAVRNALAGGL
Sbjct: 61 NRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRLLAEHDAVRNALAGGL 120
Query: 121 RPQAVRPSAPRGPPGTTPVAASPSRASSSPGRGGSSEPGSPRSAYSSDDSGCEGALSPAE 180
RPQAVRPSAPRGPPGTTPVAASPSRASSSPGRGGSSEPGSPRSAYSSDDSGCEGALSPAE
Sbjct: 121 RPQAVRPSAPRGPPGTTPVAASPSRASSSPGRGGSSEPGSPRSAYSSDDSGCEGALSPAE 180
Query: 181 RELLDFSSWLGGY 193
RELLDFSSWLGGY
Sbjct: 181 RELLDFSSWLGGY 193
>gi|55743094 achaete-scute complex homolog 1 [Homo sapiens]
Length = 236
Score = 143 bits (360), Expect = 1e-34
Identities = 89/174 (51%), Positives = 107/174 (61%), Gaps = 33/174 (18%)
Query: 23 RRRPASPELLRCSRRRRPATAETGGG-------AAAVARRNERERNRVKLVNLGFQALRQ 75
R+R +SPEL+RC RR +G G AAVARRNERERNRVKLVNLGF LR+
Sbjct: 88 RQRSSSPELMRCKRRLN----FSGFGYSLPQQQPAAVARRNERERNRVKLVNLGFATLRE 143
Query: 76 HVPHGGASKKLSKVETLRSAVEYIRALQRLLAEHDAVRNALAGGLRPQAVRPSAPRGPPG 135
HVP+G A+KK+SKVETLRSAVEYIRALQ+LL EHDAV A G+ + P+
Sbjct: 144 HVPNGAANKKMSKVETLRSAVEYIRALQQLLDEHDAVSAAFQAGVLSPTISPNY------ 197
Query: 136 TTPVAASPSRASSSPGRGGSSEPGSPRSAYSSDDSGCEGALSPAERELLDFSSW 189
+S GSP S+YSSD+ G LSP E+ELLDF++W
Sbjct: 198 ---------------SNDLNSMAGSPVSSYSSDE-GSYDPLSPEEQELLDFTNW 235
>gi|239752994 PREDICTED: achaete-scute complex homolog 5
(Drosophila) [Homo sapiens]
Length = 313
Score = 87.8 bits (216), Expect = 5e-18
Identities = 55/124 (44%), Positives = 67/124 (54%), Gaps = 15/124 (12%)
Query: 50 AAVARRNERERNRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRLLAEH 109
A + +RNERER RVK VN G+ LR H+P A K+LSKVETLR+A+ YI+ LQ LL+
Sbjct: 190 AFIQKRNERERQRVKCVNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELLSS- 248
Query: 110 DAVRNALAGGLRPQAVRPSAPRGPPGTTPVAASPSRASSSPGRGGSSEPGSPRSAY-SSD 168
P P A RG PGT P A P A+ P R G E +P S S
Sbjct: 249 -----------APDGSTPPASRGLPGTGPCPAPP--ATPRPDRPGDGEARAPSSLVPESS 295
Query: 169 DSGC 172
+S C
Sbjct: 296 ESSC 299
>gi|239747548 PREDICTED: achaete-scute complex homolog 5
(Drosophila) [Homo sapiens]
Length = 313
Score = 87.8 bits (216), Expect = 5e-18
Identities = 55/124 (44%), Positives = 67/124 (54%), Gaps = 15/124 (12%)
Query: 50 AAVARRNERERNRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRLLAEH 109
A + +RNERER RVK VN G+ LR H+P A K+LSKVETLR+A+ YI+ LQ LL+
Sbjct: 190 AFIQKRNERERQRVKCVNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELLSS- 248
Query: 110 DAVRNALAGGLRPQAVRPSAPRGPPGTTPVAASPSRASSSPGRGGSSEPGSPRSAY-SSD 168
P P A RG PGT P A P A+ P R G E +P S S
Sbjct: 249 -----------APDGSTPPASRGLPGTGPCPAPP--ATPRPDRPGDGEARAPSSLVPESS 295
Query: 169 DSGC 172
+S C
Sbjct: 296 ESSC 299
>gi|239741422 PREDICTED: achaete-scute complex homolog 5 [Homo
sapiens]
Length = 313
Score = 87.8 bits (216), Expect = 5e-18
Identities = 55/124 (44%), Positives = 67/124 (54%), Gaps = 15/124 (12%)
Query: 50 AAVARRNERERNRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRLLAEH 109
A + +RNERER RVK VN G+ LR H+P A K+LSKVETLR+A+ YI+ LQ LL+
Sbjct: 190 AFIQKRNERERQRVKCVNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELLSS- 248
Query: 110 DAVRNALAGGLRPQAVRPSAPRGPPGTTPVAASPSRASSSPGRGGSSEPGSPRSAY-SSD 168
P P A RG PGT P A P A+ P R G E +P S S
Sbjct: 249 -----------APDGSTPPASRGLPGTGPCPAPP--ATPRPDRPGDGEARAPSSLVPESS 295
Query: 169 DSGC 172
+S C
Sbjct: 296 ESSC 299
>gi|206597481 achaete-scute complex-like 4 [Homo sapiens]
Length = 173
Score = 77.0 bits (188), Expect = 9e-15
Identities = 64/156 (41%), Positives = 83/156 (53%), Gaps = 12/156 (7%)
Query: 4 GTLPRSAPPAPPVPVGCAARRRPASPELLR--CSR--RRRPATAETGGGAAAVARRNERE 59
GTLP P P+ V A R A E R C+R + P ++ A + +RNERE
Sbjct: 26 GTLP-GLPRRDPLRV--ALRLDAACWEWARSGCARGWQYLPVPLDSAFEPAFLRKRNERE 82
Query: 60 RNRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRLLAEHDAVRNALAGG 119
R RV+ VN G+ LR H+P A K+LSKVETLR+A++YI+ LQ LL E A A G
Sbjct: 83 RQRVRCVNEGYARLRDHLPRELADKRLSKVETLRAAIDYIKHLQELL-ERQAWGLEGAAG 141
Query: 120 LRPQAVRPSAPRGPPGTTPVAASPSRASSSPGRGGS 155
PQ A G + +++PS SS P GGS
Sbjct: 142 AVPQR---RAECNSDGESKASSAPS-PSSEPEEGGS 173
>gi|29126247 basic helix-loop-helix family, member a15 [Homo
sapiens]
Length = 189
Score = 67.0 bits (162), Expect = 9e-12
Identities = 44/103 (42%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 4 GTLPRSAPPAPPVPVGCAARRRPASPELLRCSRRRRPATAETGGGA-AAVARR---NERE 59
G+LP P P G +R A+ RRRRP + GG +++ RR NERE
Sbjct: 28 GSLPN---PGPEPAKGLRSRPARAAARAPGEGRRRRPGPSGPGGRRDSSIQRRLESNERE 84
Query: 60 RNRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRAL 102
R R+ +N FQALR+ +PH A KKLSK+ETL A YI++L
Sbjct: 85 RQRMHKLNNAFQALREVIPHVRADKKLSKIETLTLAKNYIKSL 127
>gi|10190680 ASCL3 [Homo sapiens]
Length = 181
Score = 67.0 bits (162), Expect = 9e-12
Identities = 34/59 (57%), Positives = 41/59 (69%)
Query: 48 GAAAVARRNERERNRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRLL 106
G A +RNERER RVK VN G+ LR H+P K+LSKVETLR+A++YI LQ LL
Sbjct: 91 GPAFTRKRNERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINYLQSLL 149
>gi|38455396 neurogenin 1 [Homo sapiens]
Length = 237
Score = 59.7 bits (143), Expect = 2e-09
Identities = 59/171 (34%), Positives = 75/171 (43%), Gaps = 22/171 (12%)
Query: 9 SAPPAPP---VPVGCAARRRPASPELLRCSRRRRPATAETGGGAAAVARR------NERE 59
S PPAP P A P + + + RRRR T RR N+RE
Sbjct: 42 SGPPAPARRGAPNISRASEVPGAQDDEQERRRRRGRTRVRSEALLHSLRRSRRVKANDRE 101
Query: 60 RNRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRLLAEHDAVRNALAGG 119
RNR+ +N ALR +P KL+K+ETLR A YI AL L D L GG
Sbjct: 102 RNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETLRLAD---QGLPGG 158
Query: 120 ------LRPQAVRPSAPRGPPGTTPVAASPSRASSSPGRGGSSEPGSPRSA 164
L PQ V P P GPP +P + + S S + S+P SP ++
Sbjct: 159 GARERLLPPQCV-PCLP-GPP--SPASDAESWGSGAAAASPLSDPSSPAAS 205
>gi|68989258 neurogenin 3 [Homo sapiens]
Length = 214
Score = 59.7 bits (143), Expect = 2e-09
Identities = 67/196 (34%), Positives = 83/196 (42%), Gaps = 20/196 (10%)
Query: 2 DGGTLPRSAPPAPPVPVGCAARRRPA----SPELLRCSR--RRRPATAETGGGAAAVARR 55
D T P SAPP+P G A +P LR R R RP + E +RR
Sbjct: 27 DEVTCPTSAPPSPTRTRGNCAEAEEGGCRGAPRKLRARRGGRSRPKS-ELALSKQRRSRR 85
Query: 56 ---NERERNRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRLLAEHDAV 112
N+RERNR+ +N ALR +P KL+K+ETLR A YI AL + L D
Sbjct: 86 KKANDRERNRMHNLNSALDALRGVLPTFPDDAKLTKIETLRFAHNYIWALTQTLRIADHS 145
Query: 113 RNALAGGLRPQAVRPSAPRGPPGTTPVAASP-SRASS-SPGRGGSSEPGSPRSAYSSDDS 170
AL P +P G PG SP S+A S SP PG + +S+
Sbjct: 146 LYALEPP-APHCGELGSPGGSPGDWGSLYSPVSQAGSLSPAASLEERPGLLGATFSA--- 201
Query: 171 GCEGALSPAERELLDF 186
LSP DF
Sbjct: 202 ----CLSPGSLAFSDF 213
>gi|21553337 atonal homolog 7 [Homo sapiens]
Length = 152
Score = 59.7 bits (143), Expect = 2e-09
Identities = 41/102 (40%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 7 PRSAPPAPPVPVGCAARRRPASPELLRCSRRRRPATAETGGGAAAVARRNERERNRVKLV 66
P A APP G A L + RRR A N RER R++ +
Sbjct: 10 PAGARVAPPCAGGTECAGTCAGAGRLESAARRRLAA-------------NARERRRMQGL 56
Query: 67 NLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRLLAE 108
N F LR+ VP G KKLSK ETL+ A+ YI AL R+LAE
Sbjct: 57 NTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMALTRILAE 98
>gi|31077092 neurogenin 2 [Homo sapiens]
Length = 272
Score = 59.7 bits (143), Expect = 2e-09
Identities = 56/168 (33%), Positives = 67/168 (39%), Gaps = 14/168 (8%)
Query: 34 CSRRRRPATAETGGGAAAVA----------RRNERERNRVKLVNLGFQALRQHVPHGGAS 83
C RR A A + G A + N RERNR+ +N ALR+ +P
Sbjct: 86 CKRRPSRARAVSRGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPED 145
Query: 84 KKLSKVETLRSAVEYIRALQRLLAEHDAVRNALAGGLRPQAVRPSAPRGPPGTTPVAASP 143
KL+K+ETLR A YI AL L D GG P A+ A PG A S
Sbjct: 146 AKLTKIETLRFAHNYIWALTETLRLADHCGG--GGGGLPGALFSEAVLLSPGGASAALSS 203
Query: 144 SRASSSPGRGGS--SEPGSPRSAYSSDDSGCEGALSPAERELLDFSSW 189
S S SP S + P S S+ S LSPA D W
Sbjct: 204 SGDSPSPASTWSCTNSPAPSSSVSSNSTSPYSCTLSPASPAGSDMDYW 251
>gi|30039710 pancreas specific transcription factor, 1a [Homo
sapiens]
Length = 328
Score = 57.8 bits (138), Expect = 6e-09
Identities = 44/129 (34%), Positives = 57/129 (44%), Gaps = 14/129 (10%)
Query: 4 GTLPRSAPPAPPVPVGC-------------AARRRPASPELLRCSRRRRPATAETGGGAA 50
G P P +P P C AR R S +RRRR +E
Sbjct: 105 GAPPGGFPYSPGSPPSCLAYPCAGAAVLSPGARLRGLSGAAAAAARRRRRVRSEAELQQL 164
Query: 51 AVARRNERERNRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRLLAEHD 110
A N RER R++ +N F+ LR H+P K+LSKV+TLR A+ YI L L+
Sbjct: 165 RQAA-NVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQADL 223
Query: 111 AVRNALAGG 119
+R AGG
Sbjct: 224 PLRGGGAGG 232
>gi|239756681 PREDICTED: basic helix-loop-helix family, member a9
[Homo sapiens]
Length = 203
Score = 55.8 bits (133), Expect = 2e-08
Identities = 51/145 (35%), Positives = 61/145 (42%), Gaps = 21/145 (14%)
Query: 36 RRRRPATAETGGGAAAVARRNERERNRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSA 95
RR RP ++ AA N RER R+ N F ALR+ + H K+LSK+ TLR A
Sbjct: 56 RRARPVRSKARRMAA-----NVRERKRILDYNEAFNALRRALRHDLGGKRLSKIATLRRA 110
Query: 96 VEYIRALQRLLAEHDAVRN----------ALAGGLRPQAVRPSAPRGPPGTTPVAASPS- 144
+ I AL +L A R A G P P GP P AA PS
Sbjct: 111 IHRIAALSLVLRASPAPRGPCGHLECHGPAARGDTGDTGASPPPPAGPSLARPDAARPSV 170
Query: 145 ----RASSSPGRGGSSEP-GSPRSA 164
R +S P G P G RSA
Sbjct: 171 PSAPRCASCPPHGPPPWPRGYLRSA 195
>gi|239751178 PREDICTED: basic helix-loop-helix family, member a9
[Homo sapiens]
Length = 235
Score = 55.8 bits (133), Expect = 2e-08
Identities = 54/163 (33%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 36 RRRRPATAETGGGAAAVARRNERERNRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSA 95
RR RP ++ AA N RER R+ N F ALR+ + H K+LSK+ TLR A
Sbjct: 56 RRARPVRSKARRMAA-----NVRERKRILDYNEAFNALRRALRHDLGGKRLSKIATLRRA 110
Query: 96 VEYIRALQRLLAEHDAVRN----------ALAGGLRPQAVRPSAPRGPPGTTPVAASPS- 144
+ I AL +L A R A G P P GP P AA PS
Sbjct: 111 IHRIAALSLVLRASPAPRGPCGHLECHGPAARGDTGDTGASPPPPAGPSLARPDAARPSV 170
Query: 145 ----RASSSPGRGGSSEPGS----PRSAYSSDDS--GCEGALS 177
R +S P + P + P A +S S C GA S
Sbjct: 171 PSAPRCASCPPHAPLARPSAVAEGPGLAQASGGSWRRCPGASS 213
>gi|239745666 PREDICTED: basic helix-loop-helix family, member a9
[Homo sapiens]
Length = 235
Score = 55.8 bits (133), Expect = 2e-08
Identities = 54/163 (33%), Positives = 67/163 (41%), Gaps = 26/163 (15%)
Query: 36 RRRRPATAETGGGAAAVARRNERERNRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSA 95
RR RP ++ AA N RER R+ N F ALR+ + H K+LSK+ TLR A
Sbjct: 56 RRARPVRSKARRMAA-----NVRERKRILDYNEAFNALRRALRHDLGGKRLSKIATLRRA 110
Query: 96 VEYIRALQRLLAEHDAVRN----------ALAGGLRPQAVRPSAPRGPPGTTPVAASPS- 144
+ I AL +L A R A G P P GP P AA PS
Sbjct: 111 IHRIAALSLVLRASPAPRGPCGHLECHGPAARGDTGDTGASPPPPAGPSLARPDAARPSV 170
Query: 145 ----RASSSPGRGGSSEPGS----PRSAYSSDDS--GCEGALS 177
R +S P + P + P A +S S C GA S
Sbjct: 171 PSAPRCASCPPHAPLARPSAVAEGPGLAQASGGSWRRCPGASS 213
>gi|148922889 scleraxis homolog B [Homo sapiens]
Length = 201
Score = 54.7 bits (130), Expect = 5e-08
Identities = 44/129 (34%), Positives = 55/129 (42%), Gaps = 15/129 (11%)
Query: 25 RPASPELLRC----SRRRRPATAETGGGAAAVARR--------NERERNRVKLVNLGFQA 72
+P RC +RRR GGG R N RER+R VN F A
Sbjct: 38 KPCRVHAARCGLQGARRRAGGRRAGGGGPGGRPGREPRQRHTANARERDRTNSVNTAFTA 97
Query: 73 LRQHVPHGGASKKLSKVETLRSAVEYIRALQRLLAEHDAVRNAL---AGGLRPQAVRPSA 129
LR +P A +KLSK+ETLR A YI L +L +A + +G A R +
Sbjct: 98 LRTLIPTEPADRKLSKIETLRLASSYISHLGNVLLAGEACGDGQPCHSGPAFFHAARAGS 157
Query: 130 PRGPPGTTP 138
P PP P
Sbjct: 158 PPPPPPPPP 166
>gi|4885075 atonal homolog 1 [Homo sapiens]
Length = 354
Score = 54.7 bits (130), Expect = 5e-08
Identities = 50/167 (29%), Positives = 69/167 (41%), Gaps = 18/167 (10%)
Query: 32 LRCSRRRRPATAETGGGAAAVARR---NERERNRVKLVNLGFQALRQHVPHGGASKKLSK 88
L CSR+R P++ + G RR N RER R+ +N F LR +P KKLSK
Sbjct: 140 LGCSRQRAPSSKQVNG--VQKQRRLAANARERRRMHGLNHAFDQLRNVIPSFNNDKKLSK 197
Query: 89 VETLRSAVEYIRALQRLLAEHDAVRNALAGGLRPQAVRPSAP------RGPPGTTPVAAS 142
ETL+ A YI AL LL +GG +P S R A +
Sbjct: 198 YETLQMAQIYINALSELL-------QTPSGGEQPPPPPASCKSDHHHLRTAASYEGGAGN 250
Query: 143 PSRASSSPGRGGSSEPGSPRSAYSSDDSGCEGALSPAERELLDFSSW 189
+ A + GGS P P S + + + + L FS++
Sbjct: 251 ATAAGAQQASGGSQRPTPPGSCRTRFSAPASAGGYSVQLDALHFSTF 297
>gi|186972126 scleraxis homolog A [Homo sapiens]
Length = 201
Score = 54.7 bits (130), Expect = 5e-08
Identities = 44/129 (34%), Positives = 55/129 (42%), Gaps = 15/129 (11%)
Query: 25 RPASPELLRC----SRRRRPATAETGGGAAAVARR--------NERERNRVKLVNLGFQA 72
+P RC +RRR GGG R N RER+R VN F A
Sbjct: 38 KPCRVHAARCGLQGARRRAGGRRAGGGGPGGRPGREPRQRHTANARERDRTNSVNTAFTA 97
Query: 73 LRQHVPHGGASKKLSKVETLRSAVEYIRALQRLLAEHDAVRNAL---AGGLRPQAVRPSA 129
LR +P A +KLSK+ETLR A YI L +L +A + +G A R +
Sbjct: 98 LRTLIPTEPADRKLSKIETLRLASSYISHLGNVLLAGEACGDGQPCHSGPAFFHAARAGS 157
Query: 130 PRGPPGTTP 138
P PP P
Sbjct: 158 PPPPPPPPP 166
>gi|226498192 atonal homolog 8 [Homo sapiens]
Length = 321
Score = 53.1 bits (126), Expect = 1e-07
Identities = 42/120 (35%), Positives = 52/120 (43%), Gaps = 23/120 (19%)
Query: 9 SAPPAPPVPVGCAARRRPASP-----------------ELLRCSRRRRPATAETGGG--- 48
SAPPAPP P R P + + S R+RP A
Sbjct: 166 SAPPAPPAPPESTVRPAPPTRPGESSYSSISHVIYNNHQDSSASPRKRPGEATAASSEIK 225
Query: 49 AAAVARR---NERERNRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRL 105
A RR N RER RV ++ F+ALR+ VP +KLSK+ LR A YI +L RL
Sbjct: 226 ALQQTRRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYILSLARL 285
>gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo
sapiens]
Length = 280
Score = 53.1 bits (126), Expect = 1e-07
Identities = 58/166 (34%), Positives = 72/166 (43%), Gaps = 20/166 (12%)
Query: 26 PASPELLRCSRR--RRPATAET----GGGAAAVARR---NERERNRVKLVNLGFQALRQH 76
PA P + S R RRP+ E G VARR N RER R + VN F LR+
Sbjct: 117 PAGPFSIFPSSRLKRRPSHCELDLAEGHQPQKVARRVFTNSRERWRQQNVNGAFAELRKL 176
Query: 77 VPHGGASKKLSKVETLRSAVEYIRALQRLLAEHDAVRNALAGGLRPQAVRPSAPRGPPGT 136
+P +KLSK E LR A++YI L RLL + A ALA G P R P
Sbjct: 177 LPTHPPDRKLSKNEVLRLAMKYIGFLVRLLRDQAA---ALAAGPTPPGPRKRPVHRVPDD 233
Query: 137 TPVAASPSRASSSPGRGGSSEPGSPRSAYSSDDSGCEGALSPAERE 182
S RA ++ S+P P + D GA P + E
Sbjct: 234 GARRGSGRRAEAA----ARSQPAPP----ADPDGSPGGAARPIKME 271
>gi|12545384 basic helix-loop-helix transcription factor HAND2 [Homo
sapiens]
Length = 217
Score = 52.4 bits (124), Expect = 2e-07
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 47 GGAAAVARR---NERERNRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQ 103
GG V RR N +ER R + +N F LR+ +P+ A KLSK++TLR A YI L
Sbjct: 93 GGPRPVKRRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLM 152
Query: 104 RLLAEHD 110
LLA+ D
Sbjct: 153 DLLAKDD 159
>gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens]
Length = 331
Score = 52.0 bits (123), Expect = 3e-07
Identities = 49/152 (32%), Positives = 63/152 (41%), Gaps = 28/152 (18%)
Query: 37 RRRPATAE---TGGGAAAVARR---NERERNRVKLVNLGFQALRQHVPHGGASKKLSKVE 90
+RRP+ E T G V RR N RER R + VN F LR+ +P KKLSK E
Sbjct: 168 KRRPSPYEMEITDGPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNE 227
Query: 91 TLRSAVEYIRALQRLLAEHDAVRNALAGGLRPQAVRPSAPRGPPGTTPVAASPSRASSSP 150
LR A++YI L +LL + + R G PV +
Sbjct: 228 ILRLAMKYINFLAKLLNDQE---------------EEGTQRAKTGKDPVVGA---GGGGG 269
Query: 151 GRGGSSEPGSPRSAYSSDDSGC----EGALSP 178
G GG + P S +S C +GA SP
Sbjct: 270 GGGGGAPPDDLLQDVLSPNSSCGSSLDGAASP 301
>gi|23111009 myogenic differentiation 1 [Homo sapiens]
Length = 320
Score = 50.4 bits (119), Expect = 9e-07
Identities = 42/129 (32%), Positives = 54/129 (41%), Gaps = 28/129 (21%)
Query: 58 RERNRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRLLAEHDAVRNALA 117
RER R+ VN F+ L++ +++L KVE LR+A+ YI LQ LL + DA
Sbjct: 117 RERRRLSKVNEAFETLKR-CTSSNPNQRLPKVEILRNAIRYIEGLQALLRDQDA------ 169
Query: 118 GGLRPQAVRPSAPRGPPGTTPVAASPSRASSSPGRG-----GSSEPGSPRSAYSSDDSGC 172
PPG +P PGRG G S+ SPRS S
Sbjct: 170 --------------APPGAAAAFYAP--GPLPPGRGGEHYSGDSDASSPRSNCSDGMMDY 213
Query: 173 EGALSPAER 181
G S A R
Sbjct: 214 SGPPSGARR 222
>gi|48255909 basic helix-loop-helix transcription factor 15 [Homo
sapiens]
Length = 199
Score = 50.4 bits (119), Expect = 9e-07
Identities = 42/113 (37%), Positives = 50/113 (44%), Gaps = 16/113 (14%)
Query: 8 RSAPPAPPVPVGC-----AARRRPASPELLRCSRRRRPATAETGGGAAAVARR----NER 58
RS A GC AARR P R A G G V R+ N R
Sbjct: 28 RSESDASDQSFGCCEGPEAARRGPGPGG-------GRRAGGGGGAGPVVVVRQRQAANAR 80
Query: 59 ERNRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRLLAEHDA 111
ER+R + VN F ALR +P +KLSK+ETLR A YI L +L D+
Sbjct: 81 ERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVLLLGDS 133
>gi|9945318 MAX binding protein [Homo sapiens]
Length = 582
Score = 48.1 bits (113), Expect = 5e-06
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 4 GTLPRSAPPAPPVPVGCAARRRPASPELLRCSRRRRPATAETGGGAAAVARRNERERNRV 63
G P+ AP PP P + PA E+ +++RP GG N+ E+NR
Sbjct: 181 GVQPQLAPQQPPPPTLGTLKLAPAE-EVKSSEQKKRP------GGIGTREVHNKLEKNRR 233
Query: 64 KLVNLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRLLAEHDAVRNALA 117
+ F+ L++++P+ KK S + LR+A+ YI++L+R E++ LA
Sbjct: 234 AHLKECFETLKRNIPNVD-DKKTSNLSVLRTALRYIQSLKRKEKEYEHEMERLA 286
>gi|17978475 oligodendrocyte lineage transcription factor 2 [Homo
sapiens]
Length = 323
Score = 47.8 bits (112), Expect = 6e-06
Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 28/133 (21%)
Query: 56 NERERNRVKLVNLGFQALRQHVP--HGGASKKLSKVETLRSAVEYI-------RALQRLL 106
N RER R+ +N+ LR+ +P HG + +KLSK+ TL A YI ++RL+
Sbjct: 114 NSRERKRMHDLNIAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTNSLEEMKRLV 173
Query: 107 AE-----HDAVRNALAGGLRPQAVRPSAPRGP--------------PGTTPVAASPSRAS 147
+E H + GGL A P+A P P P AA+ + A+
Sbjct: 174 SEIYGGHHAGFHPSACGGLAHSAPLPAATAHPAAAAHAAHHPAVHHPILPPAAAAAAAAA 233
Query: 148 SSPGRGGSSEPGS 160
++ +S PGS
Sbjct: 234 AAAAVSSASLPGS 246
>gi|5031943 nescient helix loop helix 1 [Homo sapiens]
Length = 133
Score = 47.8 bits (112), Expect = 6e-06
Identities = 44/111 (39%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 3 GGTLPRSAPPAPPVPVGCAARRRPASP---ELLRCSR----RRRPATAETGGGAAAVARR 55
GG P A P P G A P P +L SR RRR ATA+ A
Sbjct: 28 GGAGPDGAGPGGPGG-GQARGPEPGEPGRKDLQHLSREERRRRRRATAKYRTAHAT---- 82
Query: 56 NERERNRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRLL 106
RER RV+ NL F LR+ +P KKLSK+E LR A+ YI L +L
Sbjct: 83 --RERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVL 131
>gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens]
Length = 108
Score = 47.4 bits (111), Expect = 8e-06
Identities = 30/78 (38%), Positives = 39/78 (50%)
Query: 56 NERERNRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRLLAEHDAVRNA 115
N RER R + VN F LR+ +P KKLSK ETLR A+ YI L ++L E +
Sbjct: 8 NTRERWRQQNVNSAFAKLRKLIPTHPPDKKLSKNETLRLAMRYINFLVKVLGEQSLQQTG 67
Query: 116 LAGGLRPQAVRPSAPRGP 133
+A + P P P
Sbjct: 68 VAAQGNILGLFPQGPHLP 85
>gi|4505299 myogenic factor 6 [Homo sapiens]
Length = 242
Score = 47.0 bits (110), Expect = 1e-05
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 58 RERNRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRLLAEHDAVRNALA 117
RER R+K +N F+AL++ +++L KVE LRSA+ YI LQ LL D
Sbjct: 101 RERRRLKKINEAFEALKRRTV-ANPNQRLPKVEILRSAISYIERLQDLLHRLDQQEKMQE 159
Query: 118 GGLRPQAVRP 127
G+ P + RP
Sbjct: 160 LGVDPFSYRP 169
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.130 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,664,135
Number of Sequences: 37866
Number of extensions: 554330
Number of successful extensions: 8263
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 254
Number of HSP's successfully gapped in prelim test: 516
Number of HSP's that attempted gapping in prelim test: 6095
Number of HSP's gapped (non-prelim): 2736
length of query: 193
length of database: 18,247,518
effective HSP length: 97
effective length of query: 96
effective length of database: 14,574,516
effective search space: 1399153536
effective search space used: 1399153536
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.