MYOD1 15792

Name: MYOD1	Sequence: fasta or formatted (320aa)		NCBI GI: 23111009
Description: myogenic differentiation 1		Referenced in: Muscle Helix-Loop-Helix Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.8 41 4 C cysteine 3.1 10 1 D aspartate 7.2 23 2 E glutamate 6.6 21 2 F phenylalanine 2.5 8 2 G glycine 6.2 20 2 H histidine 2.5 8 2 I isoleucine 1.9 6 1 K lysine 2.8 9 1 L leucine 8.1 26 3 M methionine 1.6 5 2 N asparagine 3.1 10 1 P proline 11.6 37 2 Q glutamine 2.5 8 1 R arginine 8.4 27 3 S serine 9.7 31 2 T threonine 3.1 10 2 V valine 3.1 10 1 W tryptophan 0.3 1 1 Y tyrosine 2.8 9 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 myogenic differentiation 1 MYF5 0.312 myogenic factor 5 MYF6 0.165 myogenic factor 6 MYOG 0.162 myogenin PTF1A 0.042 pancreas specific transcription factor, 1a LYL1 0.042 lymphoblastic leukemia derived sequence 1 NEUROG1 0.042 neurogenin 1 BHLHA9 0.041 PREDICTED: basic helix-loop-helix family, member a9... BHLHA9 0.041 PREDICTED: basic helix-loop-helix family, member a9... BHLHA9 0.039 PREDICTED: basic helix-loop-helix family, member a9... ASCL5 0.039 PREDICTED: achaete-scute complex homolog 5 (Drosoph... ASCL5 0.039 PREDICTED: achaete-scute complex homolog 5 (Drosoph... ASCL5 0.039 PREDICTED: achaete-scute complex homolog 5 ASCL2 0.039 achaete-scute complex homolog-like 2 ASCL1 0.039 achaete-scute complex homolog 1 TAL1 0.038 T-cell acute lymphocytic leukemia 1 ATOH1 0.035 atonal homolog 1 ASCL4 0.035 achaete-scute complex-like 4 TWIST1 0.035 twist TWIST2 0.031 twist homolog 2 ATOH7 0.031 atonal homolog 7 FERD3L 0.030 nephew of atonal 3 TCF15 0.030 basic helix-loop-helix transcription factor 15 [Homo... SCXB 0.030 scleraxis homolog B SCXA 0.030 scleraxis homolog A HAND2 0.030 basic helix-loop-helix transcription factor HAND2 [H... NEUROG2 0.030 neurogenin 2 TAL2 0.028 T-cell acute lymphocytic leukemia 2 NEUROG3 0.027 neurogenin 3 FIGLA 0.027 factor in the germline alpha Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.