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Search of human proteins with 4885597
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4885597 sine oculis homeobox homolog 3 [Homo sapiens]
(332 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4885597 sine oculis homeobox homolog 3 [Homo sapiens] 685 0.0
gi|186910311 SIX homeobox 6 [Homo sapiens] 411 e-115
gi|219275578 SIX homeobox 2 [Homo sapiens] 289 2e-78
gi|5174681 SIX homeobox 1 [Homo sapiens] 280 2e-75
gi|142976638 sine oculis homeobox homolog 4 [Homo sapiens] 224 1e-58
gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens] 223 2e-58
gi|154091020 leucine-rich repeats and calponin homology (CH) dom... 68 1e-11
gi|89145413 short stature homeobox 2 isoform a [Homo sapiens] 66 5e-11
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 65 8e-11
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 65 8e-11
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 65 8e-11
gi|110347449 POU domain, class 4, transcription factor 1 [Homo s... 62 7e-10
gi|109452587 family with sequence similarity 98, member B isofor... 61 1e-09
gi|27436887 pre-B-cell leukemia homeobox 2 [Homo sapiens] 61 2e-09
gi|4502565 calpain, small subunit 1 [Homo sapiens] 61 2e-09
gi|51599151 calpain, small subunit 1 [Homo sapiens] 61 2e-09
gi|84570137 homeobox B3 [Homo sapiens] 60 2e-09
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 60 3e-09
gi|55956899 keratin 9 [Homo sapiens] 60 4e-09
gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 60 4e-09
gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... 60 4e-09
gi|33620755 YEATS domain containing 2 [Homo sapiens] 59 5e-09
gi|8051631 RNA binding protein (autoantigenic, hnRNP-associated ... 59 6e-09
gi|21396480 RNA binding protein (autoantigenic, hnRNP-associated... 59 6e-09
gi|4505623 pre-B-cell leukemia homeobox 1 [Homo sapiens] 59 8e-09
gi|119395750 keratin 1 [Homo sapiens] 58 1e-08
gi|238859557 regulatory factor X1 [Homo sapiens] 58 1e-08
gi|18375613 dachshund homolog 1 isoform b [Homo sapiens] 58 1e-08
gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] 58 1e-08
gi|18375609 dachshund homolog 1 isoform c [Homo sapiens] 58 1e-08
>gi|4885597 sine oculis homeobox homolog 3 [Homo sapiens]
Length = 332
Score = 685 bits (1767), Expect = 0.0
Identities = 332/332 (100%), Positives = 332/332 (100%)
Query: 1 MVFRSPLDLYSSHFLLPNFADSHHRSILLASSGGGNGAGGGGGAGGGSGGGNGAGGGGAG 60
MVFRSPLDLYSSHFLLPNFADSHHRSILLASSGGGNGAGGGGGAGGGSGGGNGAGGGGAG
Sbjct: 1 MVFRSPLDLYSSHFLLPNFADSHHRSILLASSGGGNGAGGGGGAGGGSGGGNGAGGGGAG 60
Query: 61 GAGGGGGGGSRAPPEELSMFQLPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPG 120
GAGGGGGGGSRAPPEELSMFQLPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPG
Sbjct: 61 GAGGGGGGGSRAPPEELSMFQLPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPG 120
Query: 121 ACEAINKHESILRARAVVAFHTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKL 180
ACEAINKHESILRARAVVAFHTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKL
Sbjct: 121 ACEAINKHESILRARAVVAFHTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKL 180
Query: 181 RGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELA 240
RGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELA
Sbjct: 181 RGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELA 240
Query: 241 QATGLTPTQVGNWFKNRRQRDRAAAAKNRLQHQAIGPSGMRSLAEPGCPTHGSAESPSTA 300
QATGLTPTQVGNWFKNRRQRDRAAAAKNRLQHQAIGPSGMRSLAEPGCPTHGSAESPSTA
Sbjct: 241 QATGLTPTQVGNWFKNRRQRDRAAAAKNRLQHQAIGPSGMRSLAEPGCPTHGSAESPSTA 300
Query: 301 ASPTTSVSSLTERADTGTSILSVTSSDSECDV 332
ASPTTSVSSLTERADTGTSILSVTSSDSECDV
Sbjct: 301 ASPTTSVSSLTERADTGTSILSVTSSDSECDV 332
>gi|186910311 SIX homeobox 6 [Homo sapiens]
Length = 246
Score = 411 bits (1057), Expect = e-115
Identities = 200/254 (78%), Positives = 217/254 (85%), Gaps = 8/254 (3%)
Query: 79 MFQLPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVV 138
MFQLP LNFSP+QVA VCETLEE+GD+ERLGRFLWSLPVAP ACEA+NK+ES+LRARA+V
Sbjct: 1 MFQLPILNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIV 60
Query: 139 AFHTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFP 198
AFH GN+R+LYHILENHKFTKESH KLQA+WLEAHYQEAEKLRGRPLGPVDKYRVRKKFP
Sbjct: 61 AFHGGNYRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFP 120
Query: 199 LPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRR 258
LPRTIWDGEQKTHCFKERTR LLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRR
Sbjct: 121 LPRTIWDGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRR 180
Query: 259 QRDRAAAAKNRLQHQAIGPSGMRSLAEPGCPTHGSAESPSTAASPTTSVSSLTERADTGT 318
QRDRAAAAKNRLQ Q + R+L G G+ E A SP S+SS T
Sbjct: 181 QRDRAAAAKNRLQQQVLSQGSGRALRAEG---DGTPEVLGVATSPAASLSS-----KAAT 232
Query: 319 SILSVTSSDSECDV 332
S +S+TSSDSECD+
Sbjct: 233 SAISITSSDSECDI 246
>gi|219275578 SIX homeobox 2 [Homo sapiens]
Length = 291
Score = 289 bits (740), Expect = 2e-78
Identities = 142/232 (61%), Positives = 177/232 (76%), Gaps = 5/232 (2%)
Query: 79 MFQLPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVV 138
M LPT F+ EQVA VCE L++ G+IERLGRFLWSLP ACE ++K+ES+L+A+AVV
Sbjct: 1 MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLP----ACEHLHKNESVLKAKAVV 56
Query: 139 AFHTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFP 198
AFH GNFR+LY ILE+H+F+ +H KLQ +WL+AHY EAEKLRGRPLG V KYRVR+KFP
Sbjct: 57 AFHRGNFRELYKILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFP 116
Query: 199 LPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRR 258
LPR+IWDGE+ ++CFKE++RS+LREWY +PYP+P +KRELA+ATGLT TQV NWFKNRR
Sbjct: 117 LPRSIWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRR 176
Query: 259 QRDRAAAAKNRLQHQAIGPSGMRSLAEPGCPTHGSAESPST-AASPTTSVSS 309
QRDRAA AK R ++ + L G GS+E T + +P S SS
Sbjct: 177 QRDRAAEAKERENNENSNSNSHNPLNGSGKSVLGSSEDEKTPSGTPDHSSSS 228
>gi|5174681 SIX homeobox 1 [Homo sapiens]
Length = 284
Score = 280 bits (715), Expect = 2e-75
Identities = 129/191 (67%), Positives = 160/191 (83%), Gaps = 4/191 (2%)
Query: 79 MFQLPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVV 138
M LP+ F+ EQVA VCE L++ G++ERLGRFLWSLP AC+ ++K+ES+L+A+AVV
Sbjct: 1 MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLP----ACDHLHKNESVLKAKAVV 56
Query: 139 AFHTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFP 198
AFH GNFR+LY ILE+H+F+ +H KLQ +WL+AHY EAEKLRGRPLG V KYRVR+KFP
Sbjct: 57 AFHRGNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFP 116
Query: 199 LPRTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRR 258
LPRTIWDGE+ ++CFKE++R +LREWY +PYP+P +KRELA+ATGLT TQV NWFKNRR
Sbjct: 117 LPRTIWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRR 176
Query: 259 QRDRAAAAKNR 269
QRDRAA AK R
Sbjct: 177 QRDRAAEAKER 187
>gi|142976638 sine oculis homeobox homolog 4 [Homo sapiens]
Length = 781
Score = 224 bits (570), Expect = 1e-58
Identities = 104/178 (58%), Positives = 138/178 (77%), Gaps = 4/178 (2%)
Query: 85 LNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHTGN 144
L FSP+ VA VCE L++ G+++RL RFLWSLP + + + +ES+L+ARA+VAFH G
Sbjct: 106 LAFSPDHVACVCEALQQGGNLDRLARFLWSLPQS----DLLRGNESLLKARALVAFHQGI 161
Query: 145 FRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIW 204
+ +LY ILE+H F +H LQ +W +A Y EAE+ RGRPLG VDKYR+R+KFPLPRTIW
Sbjct: 162 YPELYSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIW 221
Query: 205 DGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDR 262
DGE+ +CFKE++R+ L+E Y Q+ YP+P++KR LA+ TGL+ TQV NWFKNRRQRDR
Sbjct: 222 DGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDR 279
>gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens]
Length = 739
Score = 223 bits (568), Expect = 2e-58
Identities = 136/292 (46%), Positives = 170/292 (58%), Gaps = 23/292 (7%)
Query: 42 GGAGGGSGGGNGAGGGGAGGAGGGGGGGSRAPPEELSMFQLPT-LNFSPEQVASVCETLE 100
G A +G G GA GA G G G GS PPE S + PT L FSPEQVA VCE L
Sbjct: 44 GEAAAAAGAGAGAAAAGAEGPGSPGVPGS--PPEAAS--EPPTGLRFSPEQVACVCEALL 99
Query: 101 ETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHTGNFRDLYHILENHKFTKE 160
+ G RL RFL +LP A E + + +LRARA+VAF G + +LY +LE+ F
Sbjct: 100 QAGHAGRLSRFLGALPPA----ERLRGSDPVLRARALVAFQRGEYAELYRLLESRPFPAA 155
Query: 161 SHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSL 220
H LQ ++L A Y EAE+ RGR LG VDKYR+RKKFPLP+TIWDGE+ +CFKER+R+
Sbjct: 156 HHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAA 215
Query: 221 LREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAAAKNRLQHQAIGPSGM 280
L+ Y + YP P +KR LA TGL+ TQV NWFKNRRQRDR A G +
Sbjct: 216 LKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRTGAG---------GGAPC 266
Query: 281 RSLAEPGCPT--HGSAESPSTAASPTTSVSSLTERADTGTSILSVTSSDSEC 330
+S ++ G PT S+ SP VS+ E A G+ L+ T + C
Sbjct: 267 KSESD-GNPTTEDESSRSPEDLERGAAPVSA--EAAAQGSIFLAGTGPPAPC 315
>gi|154091020 leucine-rich repeats and calponin homology (CH) domain
containing 2 [Homo sapiens]
Length = 765
Score = 67.8 bits (164), Expect = 1e-11
Identities = 40/88 (45%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 28 LLASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSR---APPEELSMFQLPT 84
+ AS GGG +GGGG GGGS GG G GGG GGAGGGGGGG P ++F P
Sbjct: 1 MAASQGGGGNSGGGGCGGGGSSGGCGTAGGGGGGAGGGGGGGGGTLVVPIPVPTLFGQPF 60
Query: 85 LNFSP---------EQVASVCETLEETG 103
N P V S+ LEE G
Sbjct: 61 PNGPPWNPGSLQPQHTVRSLDRALEEAG 88
>gi|89145413 short stature homeobox 2 isoform a [Homo sapiens]
Length = 331
Score = 65.9 bits (159), Expect = 5e-11
Identities = 32/49 (65%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 31 SSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRAPPEELSM 79
SS AGGGGG GGG GGG G GG G GGAGGG GGG R+P EL M
Sbjct: 52 SSPAVRAAGGGGGGGGGGGGGGGGGGVGGGGAGGGAGGG-RSPVRELDM 99
Score = 41.6 bits (96), Expect = 0.001
Identities = 20/41 (48%), Positives = 21/41 (51%)
Query: 33 GGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRAP 73
GGG G GGGG GGG+GGG G G G SR P
Sbjct: 68 GGGGGGGGGGVGGGGAGGGAGGGRSPVRELDMGAAERSREP 108
Score = 32.7 bits (73), Expect = 0.46
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 230 YPNPSKKRELAQATGLTPTQVGNWFKNRRQRDR 262
YP+ + EL+Q GL+ +V WF+NRR + R
Sbjct: 164 YPDAFMREELSQRLGLSEARVQVWFQNRRAKCR 196
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 65.1 bits (157), Expect = 8e-11
Identities = 36/75 (48%), Positives = 40/75 (53%), Gaps = 14/75 (18%)
Query: 9 LYSSHFLLPNFADSHHRSILLASSGGGNGAGGGGGAG-GGSGGGNGAGGGGAG------- 60
L +SH PN +H+ +GGG G GGGGG G GG GGG GAG GGAG
Sbjct: 225 LQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAA 284
Query: 61 ------GAGGGGGGG 69
AGGGGGGG
Sbjct: 285 AAAAAAAAGGGGGGG 299
Score = 35.0 bits (79), Expect = 0.093
Identities = 28/74 (37%), Positives = 32/74 (43%), Gaps = 17/74 (22%)
Query: 30 ASSGGGNGAGGGGGAGGG---------SGGG--NGAGGGGA-----GGAGGGGGGGSR-A 72
A++ GG G GG GG+ G GGG G GGGGA AG GG R A
Sbjct: 289 AAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFA 348
Query: 73 PPEELSMFQLPTLN 86
+ PTLN
Sbjct: 349 GQNQHPSGATPTLN 362
Score = 32.7 bits (73), Expect = 0.46
Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 9/46 (19%)
Query: 30 ASSGGGNGAGGGGGAG--GGSGGGNGA-------GGGGAGGAGGGG 66
A++ A GGGG G GGS G G GGG G GGGG
Sbjct: 283 AAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGG 328
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 65.1 bits (157), Expect = 8e-11
Identities = 36/75 (48%), Positives = 40/75 (53%), Gaps = 14/75 (18%)
Query: 9 LYSSHFLLPNFADSHHRSILLASSGGGNGAGGGGGAG-GGSGGGNGAGGGGAG------- 60
L +SH PN +H+ +GGG G GGGGG G GG GGG GAG GGAG
Sbjct: 225 LQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAA 284
Query: 61 ------GAGGGGGGG 69
AGGGGGGG
Sbjct: 285 AAAAAAAAGGGGGGG 299
Score = 35.0 bits (79), Expect = 0.093
Identities = 28/74 (37%), Positives = 32/74 (43%), Gaps = 17/74 (22%)
Query: 30 ASSGGGNGAGGGGGAGGG---------SGGG--NGAGGGGA-----GGAGGGGGGGSR-A 72
A++ GG G GG GG+ G GGG G GGGGA AG GG R A
Sbjct: 289 AAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFA 348
Query: 73 PPEELSMFQLPTLN 86
+ PTLN
Sbjct: 349 GQNQHPSGATPTLN 362
Score = 32.7 bits (73), Expect = 0.46
Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 9/46 (19%)
Query: 30 ASSGGGNGAGGGGGAG--GGSGGGNGA-------GGGGAGGAGGGG 66
A++ A GGGG G GGS G G GGG G GGGG
Sbjct: 283 AAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGG 328
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 65.1 bits (157), Expect = 8e-11
Identities = 36/75 (48%), Positives = 40/75 (53%), Gaps = 14/75 (18%)
Query: 9 LYSSHFLLPNFADSHHRSILLASSGGGNGAGGGGGAG-GGSGGGNGAGGGGAG------- 60
L +SH PN +H+ +GGG G GGGGG G GG GGG GAG GGAG
Sbjct: 225 LQNSHEGYPNSQCNHYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAA 284
Query: 61 ------GAGGGGGGG 69
AGGGGGGG
Sbjct: 285 AAAAAAAAGGGGGGG 299
Score = 35.0 bits (79), Expect = 0.093
Identities = 28/74 (37%), Positives = 32/74 (43%), Gaps = 17/74 (22%)
Query: 30 ASSGGGNGAGGGGGAGGG---------SGGG--NGAGGGGA-----GGAGGGGGGGSR-A 72
A++ GG G GG GG+ G GGG G GGGGA AG GG R A
Sbjct: 289 AAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFA 348
Query: 73 PPEELSMFQLPTLN 86
+ PTLN
Sbjct: 349 GQNQHPSGATPTLN 362
Score = 32.7 bits (73), Expect = 0.46
Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 9/46 (19%)
Query: 30 ASSGGGNGAGGGGGAG--GGSGGGNGA-------GGGGAGGAGGGG 66
A++ A GGGG G GGS G G GGG G GGGG
Sbjct: 283 AAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGG 328
>gi|110347449 POU domain, class 4, transcription factor 1 [Homo
sapiens]
Length = 419
Score = 62.0 bits (149), Expect = 7e-10
Identities = 28/41 (68%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Query: 30 ASSGGG--NGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGG 68
A+ GGG +G GGGGG GGG G G G GGGG GG GGGGGG
Sbjct: 137 AAGGGGAHDGPGGGGGPGGGGGPGGGPGGGGGGGPGGGGGG 177
Score = 60.8 bits (146), Expect = 2e-09
Identities = 29/42 (69%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 33 GGGNGAGGGGGAGGGSGGGNGAG-GGGAGGAGGGGGGGSRAP 73
GGG G GGGGG GGG GGG G G GGG GG GGG GGS P
Sbjct: 148 GGGGGPGGGGGPGGGPGGGGGGGPGGGGGGPGGGLLGGSAHP 189
Score = 60.5 bits (145), Expect = 2e-09
Identities = 29/52 (55%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Query: 28 LLASSGGGNGAGGGGGA------GGGSGGGNGAGGGGAGGAGGGGGGGSRAP 73
L+A +GG A GGGGA GGG GGG G GGG GG GGG GGG P
Sbjct: 127 LMAGAGGAGAAAGGGGAHDGPGGGGGPGGGGGPGGGPGGGGGGGPGGGGGGP 178
Score = 57.4 bits (137), Expect = 2e-08
Identities = 27/45 (60%), Positives = 29/45 (64%), Gaps = 5/45 (11%)
Query: 30 ASSGGGN-----GAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGG 69
A++GGG G GGG G GGG GGG G GGGG G GGGG GG
Sbjct: 136 AAAGGGGAHDGPGGGGGPGGGGGPGGGPGGGGGGGPGGGGGGPGG 180
Score = 52.4 bits (124), Expect = 6e-07
Identities = 25/40 (62%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 30 ASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGG 69
A G G G G GGG GG GG G GGGG GG GGG GGG
Sbjct: 143 AHDGPGGGGGPGGG-GGPGGGPGGGGGGGPGGGGGGPGGG 181
Score = 43.1 bits (100), Expect = 3e-04
Identities = 60/274 (21%), Positives = 90/274 (32%), Gaps = 62/274 (22%)
Query: 33 GGGNGAGGGGGAGGGSGGGNGAGGGGAGGAG----------------------------- 63
GGG G G GGG GGG GGG G GGG G
Sbjct: 156 GGGPGGGPGGGGGGGPGGGGGGPGGGLLGGSAHPHPHMHSLGHLSHPAAAAAMNMPSGLP 215
Query: 64 -----------GGGGGGSRAPPEELSMFQLPTLNFSPEQVASVCETLEETGDIERLGRFL 112
G + A +++ +AS+C++ + ++E
Sbjct: 216 HPGLVAAAAHHGAAAAAAAAAAGQVAAASAAAAVVGAAGLASICDSDTDPRELEAFAERF 275
Query: 113 WSLPVAPGACEA-INKHESILRARAVVAFHTGNFRDLYHILENHKFTKESHGKLQAMWLE 171
+ G +A + + L+ V + + +H LQA WLE
Sbjct: 276 KQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQA-WLE 334
Query: 172 AHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQK---THCFKERTRSLLREWYLQD 228
EAE + R+K P GE+K T RSL ++
Sbjct: 335 ----EAEGAQ------------REKMNKPELFNGGEKKRKRTSIAAPEKRSL-EAYFAVQ 377
Query: 229 PYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDR 262
P P+ K +A+ L V WF N+RQ+ +
Sbjct: 378 PRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQK 411
>gi|109452587 family with sequence similarity 98, member B isoform 1
[Homo sapiens]
Length = 433
Score = 61.2 bits (147), Expect = 1e-09
Identities = 26/37 (70%), Positives = 26/37 (70%)
Query: 33 GGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGG 69
G G G GGGG GGG GGG G GGG GG GGGGGGG
Sbjct: 337 GWGGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGG 373
Score = 61.2 bits (147), Expect = 1e-09
Identities = 26/37 (70%), Positives = 26/37 (70%)
Query: 33 GGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGG 69
GGG G GGGGG GG GGG G GGG GG GG GGGG
Sbjct: 344 GGGRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGG 380
Score = 61.2 bits (147), Expect = 1e-09
Identities = 28/40 (70%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 33 GGGNGAGGGGGAGGGSGGGNGAGGGGAGGAG-GGGGGGSR 71
GG G GGGGG GG GGG G GGGG GG G GGGGGG R
Sbjct: 345 GGRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGR 384
Score = 60.5 bits (145), Expect = 2e-09
Identities = 26/36 (72%), Positives = 26/36 (72%)
Query: 33 GGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGG 68
GGG G G GGG GGG GG G GGGG GG GGGGGG
Sbjct: 340 GGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGGG 375
Score = 59.3 bits (142), Expect = 5e-09
Identities = 25/37 (67%), Positives = 25/37 (67%)
Query: 33 GGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGG 69
GGG G GG GG GGG G G GGGG G GGGGGGG
Sbjct: 339 GGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGGG 375
Score = 59.3 bits (142), Expect = 5e-09
Identities = 28/43 (65%), Positives = 28/43 (65%), Gaps = 6/43 (13%)
Query: 33 GGGNGAGGGGGAG------GGSGGGNGAGGGGAGGAGGGGGGG 69
GGG G GGGG G GG GGG G GGGG GG GGGGGGG
Sbjct: 341 GGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGG 383
Score = 58.9 bits (141), Expect = 6e-09
Identities = 25/35 (71%), Positives = 25/35 (71%)
Query: 34 GGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGG 68
GG G GG GG GGG G G G GGGG GG GGGGGG
Sbjct: 331 GGGGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGGG 365
Score = 58.5 bits (140), Expect = 8e-09
Identities = 25/36 (69%), Positives = 25/36 (69%)
Query: 33 GGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGG 68
GGG G GG GG GGG GGG G GGG GG GGG GG
Sbjct: 351 GGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGG 386
Score = 56.6 bits (135), Expect = 3e-08
Identities = 26/38 (68%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 33 GGGNGAGGGGGAGGGSGGGNGAGGGGAG-GAGGGGGGG 69
GGG G GG GG GGG GG G GGGG G G GGGGG G
Sbjct: 348 GGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRG 385
Score = 54.3 bits (129), Expect = 1e-07
Identities = 26/39 (66%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Query: 33 GGGNGA--GGGGGAGGGSGGGNGAGGGGAGGAGGGGGGG 69
GGG G GGGGG GGG GGG G GGGG GG GG G G
Sbjct: 353 GGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRG 391
Score = 53.9 bits (128), Expect = 2e-07
Identities = 23/33 (69%), Positives = 23/33 (69%)
Query: 37 GAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGG 69
G GG GG GGG GGG GGGG GG GG GGGG
Sbjct: 331 GGGGRGGWGGGGGGGGRGGGGGGGGRGGWGGGG 363
Score = 53.9 bits (128), Expect = 2e-07
Identities = 30/71 (42%), Positives = 30/71 (42%), Gaps = 32/71 (45%)
Query: 33 GGGNGAGGGGGAGGGSGGGNGAG--------------------------------GGGAG 60
GGG G GGGGG GGG GGG G G GGG G
Sbjct: 361 GGGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRGYGDPYGGGGGG 420
Query: 61 GAGGGGGGGSR 71
G GGGGGGG R
Sbjct: 421 GGGGGGGGGYR 431
Score = 50.8 bits (120), Expect = 2e-06
Identities = 23/39 (58%), Positives = 23/39 (58%)
Query: 33 GGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSR 71
G G G GG GG GGG GG G GGGG GG G G G R
Sbjct: 358 GWGGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYGGR 396
Score = 43.9 bits (102), Expect = 2e-04
Identities = 18/26 (69%), Positives = 18/26 (69%)
Query: 46 GGSGGGNGAGGGGAGGAGGGGGGGSR 71
GG G G GGGG GG GGGGGGG R
Sbjct: 331 GGGGRGGWGGGGGGGGRGGGGGGGGR 356
>gi|27436887 pre-B-cell leukemia homeobox 2 [Homo sapiens]
Length = 430
Score = 60.8 bits (146), Expect = 2e-09
Identities = 84/345 (24%), Positives = 118/345 (34%), Gaps = 76/345 (22%)
Query: 28 LLASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRAPPEELSMFQ------ 81
LL G G GG G G GG GGG G G GG G R + + Q
Sbjct: 5 LLGPPPPGGGRGGLGLVSGEPGGPGEPPGGGDPGGGSGGVPGGRGKQDIGDILQQIMTIT 64
Query: 82 -------------LPTLNFSPEQVASVCETLEETG--------------DIERLGRFLWS 114
L P + +CE E+TG + RL L
Sbjct: 65 DQSLDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRSSQEEEPVDPQLMRLDNML-- 122
Query: 115 LPVAPGACEAINKHESILRARAVVAFHTGNFRD--LYHILENHKFTKESHGKLQAMWLEA 172
+A G S A A A G D + H K + H + LE
Sbjct: 123 --LAEGVAGPEKGGGSAAAAAAAAASGGGVSPDNSIEHSDYRSKLAQIRH--IYHSELEK 178
Query: 173 HYQEA------------EKLRGRPLGPVDKYR----VRKKFP----------------LP 200
+ Q E+ R RP+ P + R + +KF L
Sbjct: 179 YEQACNEFTTHVMNLLREQSRTRPVAPKEMERMVSIIHRKFSAIQMQLKQSTCEAVMILR 238
Query: 201 RTIWDGEQKTHCFKERTRSLLREWY---LQDPYPNPSKKRELAQATGLTPTQVGNWFKNR 257
D +K F ++ +L E++ L +PYP+ K ELA+ G+T +QV NWF N+
Sbjct: 239 SRFLDARRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNK 298
Query: 258 RQRDRAAAAKNRLQHQAIGPSGMRSLAEPGCPTHGSAESPSTAAS 302
R R + K + + S+ + G S PS+A S
Sbjct: 299 RIRYKKNIGKFQEEANIYAVKTAVSVTQGGHSRTSSPTPPSSAGS 343
>gi|4502565 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 60.8 bits (146), Expect = 2e-09
Identities = 31/70 (44%), Positives = 34/70 (48%), Gaps = 12/70 (17%)
Query: 33 GGGNGAGGGGGAGGG------------SGGGNGAGGGGAGGAGGGGGGGSRAPPEELSMF 80
GGG G GGGGG GGG GGG G GGGG GG GGGGG R +S
Sbjct: 10 GGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGGGGTAMRILGGVISAI 69
Query: 81 QLPTLNFSPE 90
++PE
Sbjct: 70 SEAAAQYNPE 79
Score = 43.1 bits (100), Expect = 3e-04
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 28 LLASSGGGNGAGGGGGAGGGSGGGNGA 54
L++ +GGG G GGGGG GGG GGG A
Sbjct: 32 LISGAGGGGGGGGGGGGGGGGGGGGTA 58
Score = 42.7 bits (99), Expect = 4e-04
Identities = 19/33 (57%), Positives = 19/33 (57%)
Query: 29 LASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGG 61
L S GG G GGGGG GGG GGG G GG
Sbjct: 32 LISGAGGGGGGGGGGGGGGGGGGGGTAMRILGG 64
Score = 40.4 bits (93), Expect = 0.002
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 27 ILLASSGGGNGAGGGGGAGGGSGGG 51
++ + GGG G GGGGG GGG GGG
Sbjct: 32 LISGAGGGGGGGGGGGGGGGGGGGG 56
Score = 35.4 bits (80), Expect = 0.071
Identities = 20/58 (34%), Positives = 23/58 (39%)
Query: 33 GGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRAPPEELSMFQLPTLNFSPE 90
GGG G GGGGG GGG G GG + PP + + N S E
Sbjct: 40 GGGGGGGGGGGGGGGGGTAMRILGGVISAISEAAAQYNPEPPPPRTHYSNIEANESEE 97
>gi|51599151 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 60.8 bits (146), Expect = 2e-09
Identities = 31/70 (44%), Positives = 34/70 (48%), Gaps = 12/70 (17%)
Query: 33 GGGNGAGGGGGAGGG------------SGGGNGAGGGGAGGAGGGGGGGSRAPPEELSMF 80
GGG G GGGGG GGG GGG G GGGG GG GGGGG R +S
Sbjct: 10 GGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGGGGGTAMRILGGVISAI 69
Query: 81 QLPTLNFSPE 90
++PE
Sbjct: 70 SEAAAQYNPE 79
Score = 43.1 bits (100), Expect = 3e-04
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 28 LLASSGGGNGAGGGGGAGGGSGGGNGA 54
L++ +GGG G GGGGG GGG GGG A
Sbjct: 32 LISGAGGGGGGGGGGGGGGGGGGGGTA 58
Score = 42.7 bits (99), Expect = 4e-04
Identities = 19/33 (57%), Positives = 19/33 (57%)
Query: 29 LASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGG 61
L S GG G GGGGG GGG GGG G GG
Sbjct: 32 LISGAGGGGGGGGGGGGGGGGGGGGTAMRILGG 64
Score = 40.4 bits (93), Expect = 0.002
Identities = 15/25 (60%), Positives = 18/25 (72%)
Query: 27 ILLASSGGGNGAGGGGGAGGGSGGG 51
++ + GGG G GGGGG GGG GGG
Sbjct: 32 LISGAGGGGGGGGGGGGGGGGGGGG 56
Score = 35.4 bits (80), Expect = 0.071
Identities = 20/58 (34%), Positives = 23/58 (39%)
Query: 33 GGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRAPPEELSMFQLPTLNFSPE 90
GGG G GGGGG GGG G GG + PP + + N S E
Sbjct: 40 GGGGGGGGGGGGGGGGGTAMRILGGVISAISEAAAQYNPEPPPPRTHYSNIEANESEE 97
>gi|84570137 homeobox B3 [Homo sapiens]
Length = 431
Score = 60.5 bits (145), Expect = 2e-09
Identities = 24/39 (61%), Positives = 27/39 (69%)
Query: 36 NGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRAPP 74
N G G GGG GGG G G GG+GG GGGGGGG ++PP
Sbjct: 145 NSPGTAEGCGGGGGGGGGGGSGGSGGGGGGGGGGDKSPP 183
Score = 30.8 bits (68), Expect = 1.8
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 10/77 (12%)
Query: 235 KKRELAQATGLTPTQVGNWFKNRRQRDRAAAAKNRLQHQAIGPSGMRSLAEPGCPTHG-- 292
++ E+A L+ Q+ WF+NRR + + L + GPS S +P T G
Sbjct: 217 RRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKGLASSSGGPSPAGSPPQPMQSTAGFM 276
Query: 293 --------SAESPSTAA 301
S ESPS A
Sbjct: 277 NALHSMTPSYESPSPPA 293
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 60.1 bits (144), Expect = 3e-09
Identities = 27/34 (79%), Positives = 29/34 (85%), Gaps = 1/34 (2%)
Query: 37 GAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGS 70
G G GGAGGGSGGG+G+GGGG GGAGGGGGG S
Sbjct: 478 GGSGSGGAGGGSGGGSGSGGGG-GGAGGGGGGSS 510
Score = 57.0 bits (136), Expect = 2e-08
Identities = 25/47 (53%), Positives = 28/47 (59%)
Query: 24 HRSILLASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGS 70
HR S G G G+GGG G+GGG GG G GGG +GG G GG S
Sbjct: 475 HRGGGSGSGGAGGGSGGGSGSGGGGGGAGGGGGGSSGGGSGTAGGHS 521
Score = 53.5 bits (127), Expect = 3e-07
Identities = 22/38 (57%), Positives = 25/38 (65%)
Query: 30 ASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGG 67
A G G G+G GGG GG GGG G+ GGG+G AGG G
Sbjct: 485 AGGGSGGGSGSGGGGGGAGGGGGGSSGGGSGTAGGHSG 522
Score = 38.9 bits (89), Expect = 0.006
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 30 ASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRA 72
A++ A G G G+G GGG+GG G GGGG A
Sbjct: 460 AAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSGGGGGGA 502
Score = 32.3 bits (72), Expect = 0.60
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 30 ASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGS 70
A++ A A G G+G GGAGG G GGG GS
Sbjct: 456 AAAAAAAAAAAAAAAVSAVHRGGGSGSGGAGG-GSGGGSGS 495
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 59.7 bits (143), Expect = 4e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Query: 31 SSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGG 69
SS GG G G GGG+GGG GGG G+G GG GG GGG GGG
Sbjct: 106 SSSGGFGGGFGGGSGGGFGGGYGSGFGGFGGFGGGAGGG 144
Score = 58.2 bits (139), Expect = 1e-08
Identities = 29/44 (65%), Positives = 35/44 (79%), Gaps = 4/44 (9%)
Query: 31 SSGGGNGAGG--GGGAGGGSGGGN--GAGGGGAGGAGGGGGGGS 70
S GGG+G+GG GGG GGGSGGG+ G+GGG +GG+GG GGGS
Sbjct: 519 SYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGS 562
Score = 58.2 bits (139), Expect = 1e-08
Identities = 25/39 (64%), Positives = 27/39 (69%)
Query: 32 SGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGS 70
SGGG+ G GGG GGSGG G G G GG+GGG GGGS
Sbjct: 538 SGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGS 576
Score = 58.2 bits (139), Expect = 1e-08
Identities = 25/40 (62%), Positives = 27/40 (67%)
Query: 31 SSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGS 70
S G G GGG G+GGGSGGG G G G GG+GG GGGS
Sbjct: 551 SGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHGGGS 590
Score = 57.8 bits (138), Expect = 1e-08
Identities = 26/40 (65%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Query: 32 SGGGNGAGGG--GGAGGGSGGGNGAGGGGAGGAGGGGGGG 69
SGGG G G G GG+GG GGG+G+GGG GG GGG GGG
Sbjct: 502 SGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGG 541
Score = 57.0 bits (136), Expect = 2e-08
Identities = 25/39 (64%), Positives = 26/39 (66%)
Query: 32 SGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGS 70
SGGG G G GGG GGSGGG+ G GG G G G GGGS
Sbjct: 530 SGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGS 568
Score = 56.2 bits (134), Expect = 4e-08
Identities = 26/40 (65%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Query: 33 GGGNGAGGGGGAG--GGSGGGNGAGGGGAGGAGGGGGGGS 70
GGG+G G GGG+G GGSGG G G G GG+GGG GGGS
Sbjct: 499 GGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGS 538
Score = 55.1 bits (131), Expect = 9e-08
Identities = 25/40 (62%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Query: 33 GGGNGAGGGGGAGGGSGGG--NGAGGGGAGGAGGGGGGGS 70
G G GGG G+GGGSGGG G+GGG +GG+GGG GGS
Sbjct: 515 GSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGS 554
Score = 54.7 bits (130), Expect = 1e-07
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 31 SSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGG 69
S GG G+ GGGG+GGG GGG+G+ GG G GGG G G
Sbjct: 489 SRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSG 527
Score = 54.7 bits (130), Expect = 1e-07
Identities = 25/40 (62%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
Query: 33 GGGNGAGGGGGA--GGGSGGGNGAGGGGAGGAGGGGGGGS 70
GGG+G+ GG G GGGSG G G+GGG GG+GGG GGS
Sbjct: 507 GGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGS 546
Score = 54.7 bits (130), Expect = 1e-07
Identities = 22/37 (59%), Positives = 26/37 (70%)
Query: 33 GGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGG 69
GGG+G G GG+GGG GG+G GG G+GGG GGG
Sbjct: 535 GGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGG 571
Score = 54.7 bits (130), Expect = 1e-07
Identities = 23/38 (60%), Positives = 26/38 (68%)
Query: 32 SGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGG 69
SGGG+ G GG GGGSG G G+GGG GG+G GG G
Sbjct: 546 SGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGSG 583
Score = 53.9 bits (128), Expect = 2e-07
Identities = 29/54 (53%), Positives = 33/54 (61%), Gaps = 7/54 (12%)
Query: 32 SGG--GNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGG-----GGSRAPPEELS 78
SGG G G+G GGG+GGG GGG+G+ GG G GGG G GGS EE S
Sbjct: 554 SGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGGGEEAS 607
Score = 53.5 bits (127), Expect = 3e-07
Identities = 24/39 (61%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Query: 34 GGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGG--GGS 70
GG+G G GG+GG GGG+G+GGG GG GGG G GGS
Sbjct: 544 GGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSRGGS 582
Score = 52.8 bits (125), Expect = 4e-07
Identities = 24/36 (66%), Positives = 24/36 (66%)
Query: 33 GGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGG 68
GGG G G GGG GGG G G G GG GGAGGG GG
Sbjct: 112 GGGFGGGSGGGFGGGYGSGFGGFGGFGGGAGGGDGG 147
Score = 52.4 bits (124), Expect = 6e-07
Identities = 22/40 (55%), Positives = 25/40 (62%)
Query: 30 ASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGG 69
+ S GG+G GGG+G G G G G GGG GG GG GGG
Sbjct: 510 SGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGG 549
Score = 50.8 bits (120), Expect = 2e-06
Identities = 22/37 (59%), Positives = 23/37 (62%)
Query: 34 GGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGS 70
G G GG GGGSGGG G G G GG+GG GGGS
Sbjct: 488 GSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGS 524
Score = 50.8 bits (120), Expect = 2e-06
Identities = 22/43 (51%), Positives = 26/43 (60%)
Query: 30 ASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRA 72
+ G G G GGG G+ GGSGG +G G G G +GG GGG A
Sbjct: 564 SGGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGGGEEA 606
Score = 50.4 bits (119), Expect = 2e-06
Identities = 24/40 (60%), Positives = 25/40 (62%)
Query: 30 ASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGG 69
ASS GG GG G GG SGGG + GG GG GGG GGG
Sbjct: 83 ASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGG 122
Score = 50.4 bits (119), Expect = 2e-06
Identities = 23/42 (54%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 32 SGGGNGAGGGGGAGGGSGGGNGAG-GGGAGGAGGGGGGGSRA 72
SG G+GG G G GSGGG+G G GGG+GG GG GG +
Sbjct: 510 SGSRGGSGGSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHS 551
Score = 49.7 bits (117), Expect = 4e-06
Identities = 29/56 (51%), Positives = 34/56 (60%), Gaps = 15/56 (26%)
Query: 30 ASSGGGNGAGGGGGAG--GGSGGGNGAG-----------GGG--AGGAGGGGGGGS 70
+ SGGG+G G GGG+G GGSGG +G G GGG A G+GGG GGGS
Sbjct: 562 SGSGGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGS 617
Score = 48.9 bits (115), Expect = 6e-06
Identities = 28/48 (58%), Positives = 30/48 (62%), Gaps = 8/48 (16%)
Query: 31 SSGGGNGAGG-----GGGAGGGSGGGNGAGGGG---AGGAGGGGGGGS 70
S GGG+G G GGG GGGS G GA GGG +GG GGG GGGS
Sbjct: 72 SYGGGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGS 119
Score = 47.0 bits (110), Expect = 2e-05
Identities = 25/44 (56%), Positives = 29/44 (65%), Gaps = 4/44 (9%)
Query: 31 SSGGGN-GAGGGGGAGGGSGGGNGAGGGGA---GGAGGGGGGGS 70
SSG G G GG GG+GG G G+ G GG+ GG+GGG GGGS
Sbjct: 467 SSGAGKIGLGGRGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGS 510
Score = 46.6 bits (109), Expect = 3e-05
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 33 GGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRAPPEELS 78
GGG+G G GGG G G GG G GGG GG GG ++ +EL+
Sbjct: 116 GGGSGGGFGGGYGSGFGGFGGFGGGAGGGDGGILTANEKSTMQELN 161
Score = 45.1 bits (105), Expect = 9e-05
Identities = 21/38 (55%), Positives = 21/38 (55%)
Query: 33 GGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGS 70
GG G GG G G S GG G G GG G G GGG GS
Sbjct: 92 GGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGS 129
Score = 44.3 bits (103), Expect = 2e-04
Identities = 25/56 (44%), Positives = 28/56 (50%), Gaps = 15/56 (26%)
Query: 32 SGGGNGAGGG--GGAGGGSGGGNGAGG-------------GGAGGAGGGGGGGSRA 72
SGGG G G G GG+GG GGG+G GG G GG GGG G S +
Sbjct: 568 SGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGGGSGKSSHS 623
Score = 43.9 bits (102), Expect = 2e-04
Identities = 26/60 (43%), Positives = 28/60 (46%), Gaps = 18/60 (30%)
Query: 30 ASSGGGNGAG------------------GGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSR 71
+SSGGG G G GGGG+ G S GG GG A GGG GGGSR
Sbjct: 36 SSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGGGSGGGFSASSLGGGFGGGSR 95
Score = 43.1 bits (100), Expect = 3e-04
Identities = 22/53 (41%), Positives = 24/53 (45%)
Query: 18 NFADSHHRSILLASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGS 70
+F S I L GG G+ G G GG G G G GG G G G GGS
Sbjct: 464 DFESSGAGKIGLGGRGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGS 516
Score = 40.4 bits (93), Expect = 0.002
Identities = 31/76 (40%), Positives = 34/76 (44%), Gaps = 29/76 (38%)
Query: 26 SILLASSGGGNGAG-----------------GGGGAGG------GSGGGN----GAGGGG 58
S L+ SGGG G G GGGG GG G GGG+ G GGGG
Sbjct: 8 SSYLSRSGGGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGG 67
Query: 59 AGG--AGGGGGGGSRA 72
+ G GGG GGG A
Sbjct: 68 SFGYSYGGGSGGGFSA 83
Score = 40.4 bits (93), Expect = 0.002
Identities = 22/43 (51%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 33 GGGNGAGGGGGAGGG-----SGGGNGAGGGGAGGAGGGGGGGS 70
GG G GGG+GGG GGG G G G GGA GGG S
Sbjct: 66 GGSFGYSYGGGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSS 108
Score = 32.7 bits (73), Expect = 0.46
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 8/44 (18%)
Query: 34 GGNGAGGGGGAGG-GSGGGNGAGG-------GGAGGAGGGGGGG 69
GG GAG G GG G+GG GG+GG+ GGGG G
Sbjct: 460 GGQEDFESSGAGKIGLGGRGGSGGSYGRGSRGGSGGSYGGGGSG 503
Score = 29.3 bits (64), Expect = 5.1
Identities = 15/31 (48%), Positives = 16/31 (51%)
Query: 41 GGGAGGGSGGGNGAGGGGAGGAGGGGGGGSR 71
GG S G G GG GG+GG G GSR
Sbjct: 460 GGQEDFESSGAGKIGLGGRGGSGGSYGRGSR 490
>gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform b [Homo sapiens]
Length = 373
Score = 59.7 bits (143), Expect = 4e-09
Identities = 26/51 (50%), Positives = 29/51 (56%)
Query: 20 ADSHHRSILLASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGS 70
A HH A G+ A GGAGG GGG + GGG GG GGGGGGG+
Sbjct: 189 AGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGA 239
Score = 58.2 bits (139), Expect = 1e-08
Identities = 25/37 (67%), Positives = 26/37 (70%)
Query: 30 ASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGG 66
AS+GG GAGGGG A G GGG G GGGG G AG GG
Sbjct: 208 ASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGG 244
Score = 43.1 bits (100), Expect = 3e-04
Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Query: 17 PNFADSHHRSILLASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGG---AGGGGGGG 69
P++ HH + A AG G AG + GAGG G GG AGGGGGGG
Sbjct: 179 PHYHHHHHHA---AGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGG 231
>gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform a [Homo sapiens]
Length = 403
Score = 59.7 bits (143), Expect = 4e-09
Identities = 26/51 (50%), Positives = 29/51 (56%)
Query: 20 ADSHHRSILLASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGS 70
A HH A G+ A GGAGG GGG + GGG GG GGGGGGG+
Sbjct: 189 AGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGA 239
Score = 58.2 bits (139), Expect = 1e-08
Identities = 25/37 (67%), Positives = 26/37 (70%)
Query: 30 ASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGG 66
AS+GG GAGGGG A G GGG G GGGG G AG GG
Sbjct: 208 ASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGG 244
Score = 43.1 bits (100), Expect = 3e-04
Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Query: 17 PNFADSHHRSILLASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGG---AGGGGGGG 69
P++ HH + A AG G AG + GAGG G GG AGGGGGGG
Sbjct: 179 PHYHHHHHHA---AGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGG 231
>gi|33620755 YEATS domain containing 2 [Homo sapiens]
Length = 1422
Score = 59.3 bits (142), Expect = 5e-09
Identities = 25/43 (58%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 30 ASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRA 72
+++ GG+GAGGGGG GGG G G+G GGG GG GG GGG+++
Sbjct: 795 SAASGGSGAGGGGGGGGGGGSGSG-GGGSTGGGGGTAGGGTQS 836
Score = 58.2 bits (139), Expect = 1e-08
Identities = 24/42 (57%), Positives = 29/42 (69%)
Query: 28 LLASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGG 69
L + S G+G GGG GGG GGG+G+GGGG+ G GGG GG
Sbjct: 791 LQSGSAASGGSGAGGGGGGGGGGGSGSGGGGSTGGGGGTAGG 832
Score = 57.4 bits (137), Expect = 2e-08
Identities = 25/44 (56%), Positives = 26/44 (59%)
Query: 30 ASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRAP 73
AS G G G GGGGG GGGSG G G GG GG GGG + P
Sbjct: 797 ASGGSGAGGGGGGGGGGGSGSGGGGSTGGGGGTAGGGTQSTAGP 840
Score = 54.3 bits (129), Expect = 1e-07
Identities = 23/41 (56%), Positives = 26/41 (63%)
Query: 30 ASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGS 70
A+ G+ A GG GAGGG GGG G G G GG GGGGG+
Sbjct: 789 ANLQSGSAASGGSGAGGGGGGGGGGGSGSGGGGSTGGGGGT 829
Score = 54.3 bits (129), Expect = 1e-07
Identities = 25/49 (51%), Positives = 27/49 (55%)
Query: 30 ASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRAPPEELS 78
A+SGG GGGGG GGG G G G G GG GGG S A P +S
Sbjct: 796 AASGGSGAGGGGGGGGGGGSGSGGGGSTGGGGGTAGGGTQSTAGPGGIS 844
Score = 53.5 bits (127), Expect = 3e-07
Identities = 27/48 (56%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 18 NFADSHHRSILLASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGG 65
N A+ S SG G G GGGGG G GSGGG GGGG G AGGG
Sbjct: 787 NNANLQSGSAASGGSGAGGGGGGGGGGGSGSGGGGSTGGGG-GTAGGG 833
Score = 48.5 bits (114), Expect = 8e-06
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 26 SILLASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGG---GGGGSRA 72
+IL A++ +G G G+GGG G GGGG G+GGG GGGG A
Sbjct: 781 AILRATNNANLQSGSAASGGSGAGGGGGGGGGGGSGSGGGGSTGGGGGTA 830
Score = 39.7 bits (91), Expect = 0.004
Identities = 19/44 (43%), Positives = 21/44 (47%)
Query: 27 ILLASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGS 70
+LL G A GS G+G GG GG GGGGG GS
Sbjct: 774 LLLIPQGAILRATNNANLQSGSAASGGSGAGGGGGGGGGGGSGS 817
>gi|8051631 RNA binding protein (autoantigenic, hnRNP-associated
with lethal yellow) long isoform [Homo sapiens]
Length = 306
Score = 58.9 bits (141), Expect = 6e-09
Identities = 26/46 (56%), Positives = 30/46 (65%)
Query: 29 LASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRAPP 74
+A+ N G G GGG+GGG G GG G GG+GGGGGGGS PP
Sbjct: 211 IAAEQKANPDGKKKGDGGGAGGGGGGGGSGGGGSGGGGGGGSSRPP 256
Score = 55.5 bits (132), Expect = 7e-08
Identities = 26/41 (63%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 35 GNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRAPPE 75
G G GGGAGGG GGG G+GGGG+GG GGGG AP E
Sbjct: 221 GKKKGDGGGAGGGGGGG-GSGGGGSGGGGGGGSSRPPAPQE 260
>gi|21396480 RNA binding protein (autoantigenic, hnRNP-associated
with lethal yellow) short isoform [Homo sapiens]
Length = 290
Score = 58.9 bits (141), Expect = 6e-09
Identities = 26/46 (56%), Positives = 30/46 (65%)
Query: 29 LASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRAPP 74
+A+ N G G GGG+GGG G GG G GG+GGGGGGGS PP
Sbjct: 195 IAAEQKANPDGKKKGDGGGAGGGGGGGGSGGGGSGGGGGGGSSRPP 240
Score = 55.5 bits (132), Expect = 7e-08
Identities = 26/41 (63%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 35 GNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRAPPE 75
G G GGGAGGG GGG G+GGGG+GG GGGG AP E
Sbjct: 205 GKKKGDGGGAGGGGGGG-GSGGGGSGGGGGGGSSRPPAPQE 244
>gi|4505623 pre-B-cell leukemia homeobox 1 [Homo sapiens]
Length = 430
Score = 58.5 bits (140), Expect = 8e-09
Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 205 DGEQKTHCFKERTRSLLREWY---LQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRD 261
D +K F ++ +L E++ L +PYP+ K ELA+ G+T +QV NWF N+R R
Sbjct: 232 DARRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRY 291
Query: 262 RAAAAKNRLQHQAIGPSGMRSLAEPGCPTHGS-AESPSTAASPTTSVSSLTERADTGTSI 320
+ K Q +A + ++ HGS A SPST S SS +++G
Sbjct: 292 KKNIGK--FQEEANIYAAKTAVTATNVSAHGSQANSPSTPNS--AGSSSSFNMSNSGDLF 347
Query: 321 LSVTSSDSE 329
+SV S + +
Sbjct: 348 MSVQSLNGD 356
>gi|119395750 keratin 1 [Homo sapiens]
Length = 644
Score = 58.2 bits (139), Expect = 1e-08
Identities = 31/53 (58%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 16 LPNFADSHHRSILLASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGG 68
L N S SI +A GGG G+G GGG GGG GG G GGGG GG G GGGG
Sbjct: 67 LVNLGGSKSISISVAR-GGGRGSGFGGGYGGGGFGGGGFGGGGFGGGGIGGGG 118
Score = 54.7 bits (130), Expect = 1e-07
Identities = 32/63 (50%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 34 GGNGAGGGGGAGGGSGG-GNGAGGGGAGGAGGGGGGGSRAPPEELSMFQLPTLNFSPEQV 92
GG G GGGG GGG GG G+G GG G GG GGGG GG P Q T+N S Q
Sbjct: 105 GGGGFGGGGIGGGGFGGFGSGGGGFGGGGFGGGGYGGGYGPVCPPGGIQEVTINQSLLQP 164
Query: 93 ASV 95
+V
Sbjct: 165 LNV 167
Score = 54.7 bits (130), Expect = 1e-07
Identities = 32/59 (54%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 17 PNFADSHHRSILLASSGGGNGAGGGG-GAGG---GSGGGN-GAGGGGAGGAGGGGGGGS 70
PN + S S S GG G GGGG G+GG GSGGG+ G+GGGG GG G G GGS
Sbjct: 499 PNVSVSVSTSHTTISGGGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGSGGS 557
Score = 54.3 bits (129), Expect = 1e-07
Identities = 26/38 (68%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Query: 33 GGGNGAG--GGGGAGGGSGGGNGAGGGGAGGAGGGGGG 68
GGG G G GGGG GGG GG G+GGGG GG G GGGG
Sbjct: 101 GGGFGGGGFGGGGIGGGGFGGFGSGGGGFGGGGFGGGG 138
Score = 54.3 bits (129), Expect = 1e-07
Identities = 27/44 (61%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 33 GGGNGAG--GGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRAPP 74
GGG G G GGGG GG GG G GGGG GG G GGG G PP
Sbjct: 106 GGGFGGGGIGGGGFGGFGSGGGGFGGGGFGGGGYGGGYGPVCPP 149
Score = 52.0 bits (123), Expect = 7e-07
Identities = 23/39 (58%), Positives = 26/39 (66%)
Query: 32 SGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGS 70
SGGG+ GGGG G GS G + GG GG+GGGGGG S
Sbjct: 561 SGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSS 599
Score = 51.2 bits (121), Expect = 1e-06
Identities = 25/44 (56%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Query: 31 SSGGGNGAGGGGGAGGGS----GGGNGAGGGGAGGAGGGGGGGS 70
S GG G+GGGGG G GS G G+GGG G GGGGG GS
Sbjct: 534 SGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGGGGGHGS 577
Score = 51.2 bits (121), Expect = 1e-06
Identities = 23/41 (56%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 31 SSGGGNGAGGGGGAGGGSGGGNGAGG--GGAGGAGGGGGGG 69
S GG G+GGGGG G G G+ +GG GG+GG GGG GG
Sbjct: 561 SGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGG 601
Score = 51.2 bits (121), Expect = 1e-06
Identities = 26/47 (55%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 24 HRSILLASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGS 70
H S SS GG GG GG GGGS GG G+GGG +GG+ GG G S
Sbjct: 575 HGSYGSGSSSGGY-RGGSGGGGGGSSGGRGSGGGSSGGSIGGRGSSS 620
Score = 50.8 bits (120), Expect = 2e-06
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 33 GGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGS 70
GGG+G+ G G + GG GG+G GGGG+ G G GGG S
Sbjct: 572 GGGHGSYGSGSSSGGYRGGSGGGGGGSSGGRGSGGGSS 609
Score = 49.3 bits (116), Expect = 5e-06
Identities = 23/42 (54%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 30 ASSGGGNGAGGGGGAGGGSGG-GNGAGGGGAGGAGGGGGGGS 70
+S G G G+ G GG GGG G G+G+ GG G GGGGGGS
Sbjct: 557 SSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGS 598
Score = 48.5 bits (114), Expect = 8e-06
Identities = 21/38 (55%), Positives = 23/38 (60%)
Query: 32 SGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGG 69
SGGG G G G+G SGG G GGG GG+ GG G G
Sbjct: 568 SGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSGGRGSG 605
Score = 47.8 bits (112), Expect = 1e-05
Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 6/45 (13%)
Query: 30 ASSGGGNGAGGGGGAGGGSGGGNGAG------GGGAGGAGGGGGG 68
+S G G G+ G GG GGG G G+G GGG+ G+GGGGGG
Sbjct: 530 SSYGSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGGGGG 574
Score = 45.4 bits (106), Expect = 7e-05
Identities = 21/41 (51%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 31 SSGGGNGAGGGGGAGGGSGGGN-GAGGGGAGGAGGGGGGGS 70
S GGG G+ GG G+GGGS GG+ G G +GG GG S
Sbjct: 591 SGGGGGGSSGGRGSGGGSSGGSIGGRGSSSGGVKSSGGSSS 631
Score = 42.7 bits (99), Expect = 4e-04
Identities = 27/57 (47%), Positives = 30/57 (52%), Gaps = 17/57 (29%)
Query: 30 ASSGGGNGA-GGGGGAG-------GGS---------GGGNGAGGGGAGGAGGGGGGG 69
+S GGG G+ G GGG G GGS GGG G+G GG G GG GGGG
Sbjct: 47 SSCGGGGGSFGAGGGFGSRSLVNLGGSKSISISVARGGGRGSGFGGGYGGGGFGGGG 103
Score = 36.6 bits (83), Expect = 0.032
Identities = 18/35 (51%), Positives = 18/35 (51%)
Query: 33 GGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGG 67
GG G G GGG GG G G G GGG G GG
Sbjct: 117 GGFGGFGSGGGGFGGGGFGGGGYGGGYGPVCPPGG 151
Score = 35.8 bits (81), Expect = 0.055
Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 13/54 (24%)
Query: 32 SGGGNGAGGGG-------------GAGGGSGGGNGAGGGGAGGAGGGGGGGSRA 72
SGGG +G G GG GG + GGG G G GGG GSR+
Sbjct: 13 SGGGFSSGSAGIINYQRRTTSSSTRRSGGGGGRFSSCGGGGGSFGAGGGFGSRS 66
Score = 32.3 bits (72), Expect = 0.60
Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 28/67 (41%)
Query: 31 SSGGGNGAGGGGG---AGGGSGGGNGAGGG-------------------------GAGGA 62
+S +GGGGG + GG GG GAGGG G+G
Sbjct: 32 TSSSTRRSGGGGGRFSSCGGGGGSFGAGGGFGSRSLVNLGGSKSISISVARGGGRGSGFG 91
Query: 63 GGGGGGG 69
GG GGGG
Sbjct: 92 GGYGGGG 98
Score = 32.3 bits (72), Expect = 0.60
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 30 ASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRA 72
+SS +G GGG + G GGG+ GGG G GGS++
Sbjct: 33 SSSTRRSGGGGGRFSSCGGGGGSFGAGGGFGSRSLVNLGGSKS 75
Score = 30.4 bits (67), Expect = 2.3
Identities = 15/28 (53%), Positives = 15/28 (53%)
Query: 31 SSGGGNGAGGGGGAGGGSGGGNGAGGGG 58
S GGG G GG GG G G G G GG
Sbjct: 124 SGGGGFGGGGFGGGGYGGGYGPVCPPGG 151
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 57.8 bits (138), Expect = 1e-08
Identities = 22/39 (56%), Positives = 28/39 (71%)
Query: 30 ASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGG 68
++ G + + GGGG+GGG GGG G GGGG+G GGGG G
Sbjct: 371 STGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGGGGSG 409
Score = 56.2 bits (134), Expect = 4e-08
Identities = 24/46 (52%), Positives = 29/46 (63%)
Query: 27 ILLASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRA 72
++ +S+ G GA G GG GGG G GGGG GG+G GGGGS A
Sbjct: 365 VVASSTSTGAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGGGGSGA 410
Score = 55.5 bits (132), Expect = 7e-08
Identities = 23/33 (69%), Positives = 25/33 (75%)
Query: 31 SSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAG 63
SSGGG GGGGG GGG GGG+G+ GGG GAG
Sbjct: 379 SSGGGGSGGGGGGGGGGGGGGSGSTGGGGSGAG 411
Score = 52.0 bits (123), Expect = 7e-07
Identities = 21/36 (58%), Positives = 24/36 (66%)
Query: 30 ASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGG 65
AS+ G G GGGG GGG GGG G+G G GG+G G
Sbjct: 376 ASNSSGGGGSGGGGGGGGGGGGGGSGSTGGGGSGAG 411
Score = 50.8 bits (120), Expect = 2e-06
Identities = 20/38 (52%), Positives = 22/38 (57%)
Query: 30 ASSGGGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGG 67
A + +G GG GG GGG GGG G G G GG G G G
Sbjct: 374 AGASNSSGGGGSGGGGGGGGGGGGGGSGSTGGGGSGAG 411
Score = 40.8 bits (94), Expect = 0.002
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
Query: 29 LASSG-------GGNGAGGGGGAGGGSGGGNGAGGGGAGGAGGGGGGG 69
+ASSG G G G+ +G GG G GG GGGGGGG
Sbjct: 350 VASSGSMPMYVSGSQVVASSTSTGAGASNSSGGGGSGGGGGGGGGGGG 397
Score = 35.8 bits (81), Expect = 0.055
Identities = 23/52 (44%), Positives = 24/52 (46%), Gaps = 8/52 (15%)
Query: 31 SSGGGNGAGGGGGA------GGGSGGGNGA--GGGGAGGAGGGGGGGSRAPP 74
S GGG G GGGGG GGGSG G GG G A +RA P
Sbjct: 385 SGGGGGGGGGGGGGGSGSTGGGGSGAGTYVIQGGYMLGSASQSYSHTTRASP 436
>gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]
Length = 558
Score = 57.8 bits (138), Expect = 1e-08
Identities = 27/52 (51%), Positives = 30/52 (57%), Gaps = 12/52 (23%)
Query: 29 LASSGGGNGAGGGGGAGGGSGGGNGAGGGGAG------------GAGGGGGG 68
+ S+GGG G GG GG GG SG G G GGGG G G+GGGGGG
Sbjct: 70 VTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGG 121
Score = 53.5 bits (127), Expect = 3e-07
Identities = 24/35 (68%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Query: 40 GGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRAPP 74
GGGG GGGSGGG G+ G GG GGGGGGGS P
Sbjct: 74 GGGGGGGGSGGGGGSSGN--GGGGGGGGGGSNCNP 106
Score = 51.6 bits (122), Expect = 1e-06
Identities = 27/53 (50%), Positives = 29/53 (54%), Gaps = 12/53 (22%)
Query: 32 SGGGNGAGGGGGAGGGSGGG-----------NGAGGGGAGGAGGGGGGGSRAP 73
SGGG G+ G GG GGG GGG NG+GGGG GG GGG S P
Sbjct: 82 SGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGG-GGISAGGGVASSTP 133
Score = 28.9 bits (63), Expect = 6.7
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 14/54 (25%)
Query: 31 SSGGGNGAGGG--------------GGAGGGSGGGNGAGGGGAGGAGGGGGGGS 70
+ GGG G GGG GG GGG G G A G S
Sbjct: 91 NGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSS 144
>gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]
Length = 706
Score = 57.8 bits (138), Expect = 1e-08
Identities = 27/52 (51%), Positives = 30/52 (57%), Gaps = 12/52 (23%)
Query: 29 LASSGGGNGAGGGGGAGGGSGGGNGAGGGGAG------------GAGGGGGG 68
+ S+GGG G GG GG GG SG G G GGGG G G+GGGGGG
Sbjct: 70 VTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGG 121
Score = 53.5 bits (127), Expect = 3e-07
Identities = 24/35 (68%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Query: 40 GGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRAPP 74
GGGG GGGSGGG G+ G GG GGGGGGGS P
Sbjct: 74 GGGGGGGGSGGGGGSSGN--GGGGGGGGGGSNCNP 106
Score = 51.6 bits (122), Expect = 1e-06
Identities = 27/53 (50%), Positives = 29/53 (54%), Gaps = 12/53 (22%)
Query: 32 SGGGNGAGGGGGAGGGSGGG-----------NGAGGGGAGGAGGGGGGGSRAP 73
SGGG G+ G GG GGG GGG NG+GGGG GG GGG S P
Sbjct: 82 SGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGG-GGISAGGGVASSTP 133
Score = 28.9 bits (63), Expect = 6.7
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 14/54 (25%)
Query: 31 SSGGGNGAGGG--------------GGAGGGSGGGNGAGGGGAGGAGGGGGGGS 70
+ GGG G GGG GG GGG G G A G S
Sbjct: 91 NGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSS 144
>gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]
Length = 504
Score = 57.8 bits (138), Expect = 1e-08
Identities = 27/52 (51%), Positives = 30/52 (57%), Gaps = 12/52 (23%)
Query: 29 LASSGGGNGAGGGGGAGGGSGGGNGAGGGGAG------------GAGGGGGG 68
+ S+GGG G GG GG GG SG G G GGGG G G+GGGGGG
Sbjct: 70 VTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGG 121
Score = 53.5 bits (127), Expect = 3e-07
Identities = 24/35 (68%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Query: 40 GGGGAGGGSGGGNGAGGGGAGGAGGGGGGGSRAPP 74
GGGG GGGSGGG G+ G GG GGGGGGGS P
Sbjct: 74 GGGGGGGGSGGGGGSSGN--GGGGGGGGGGSNCNP 106
Score = 51.6 bits (122), Expect = 1e-06
Identities = 27/53 (50%), Positives = 29/53 (54%), Gaps = 12/53 (22%)
Query: 32 SGGGNGAGGGGGAGGGSGGG-----------NGAGGGGAGGAGGGGGGGSRAP 73
SGGG G+ G GG GGG GGG NG+GGGG GG GGG S P
Sbjct: 82 SGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGG-GGISAGGGVASSTP 133
Score = 28.9 bits (63), Expect = 6.7
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 14/54 (25%)
Query: 31 SSGGGNGAGGG--------------GGAGGGSGGGNGAGGGGAGGAGGGGGGGS 70
+ GGG G GGG GG GGG G G A G S
Sbjct: 91 NGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSSSSS 144
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.133 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,818,346
Number of Sequences: 37866
Number of extensions: 944315
Number of successful extensions: 42553
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 214
Number of HSP's that attempted gapping in prelim test: 11031
Number of HSP's gapped (non-prelim): 13427
length of query: 332
length of database: 18,247,518
effective HSP length: 103
effective length of query: 229
effective length of database: 14,347,320
effective search space: 3285536280
effective search space used: 3285536280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.