Guide to the Human Genome
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Search of human proteins with 48314820

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|48314820 5-oxoprolinase (ATP-hydrolysing) [Homo sapiens]
         (1288 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|48314820 5-oxoprolinase (ATP-hydrolysing) [Homo sapiens]          2591   0.0  
gi|30039710 pancreas specific transcription factor, 1a [Homo sap...    33   2.3  
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]    32   3.0  
gi|48976054 hypothetical protein LOC79886 [Homo sapiens]               32   3.0  
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]     32   3.0  
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]     32   3.0  
gi|217035081 aarF domain containing kinase 1 isoform b [Homo sap...    32   3.9  
gi|40254938 aarF domain containing kinase 1 isoform a [Homo sapi...    32   3.9  
gi|62865637 AT rich interactive domain 3C (BRIGHT- like) [Homo s...    32   3.9  
gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]            32   5.1  
gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]            32   5.1  
gi|113413437 PREDICTED: hypothetical protein [Homo sapiens]            32   5.1  
gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s...    31   6.7  
gi|24797153 faciogenital dysplasia protein [Homo sapiens]              31   6.7  
gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa...    31   6.7  
gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s...    31   6.7  
gi|206725452 leukocyte receptor cluster (LRC) member 9 [Homo sap...    31   6.7  
gi|169167211 PREDICTED: FRAS1 related extracellular matrix 3 [Ho...    31   8.7  
gi|169166904 PREDICTED: FRAS1 related extracellular matrix 3 [Ho...    31   8.7  
gi|169166334 PREDICTED: FRAS1 related extracellular matrix 3 [Ho...    31   8.7  
gi|77681565 NG5 protein [Homo sapiens]                                 31   8.7  
gi|13569901 TSC22 domain family, member 4 [Homo sapiens]               31   8.7  
gi|79749430 FRAS1-related extracellular matrix protein 2 precurs...    31   8.7  
gi|157885806 chromosome 12 open reading frame 51 [Homo sapiens]        31   8.7  
gi|115387099 brain-specific angiogenesis inhibitor 2 [Homo sapiens]    31   8.7  
gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]        31   8.7  
gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]        31   8.7  

>gi|48314820 5-oxoprolinase (ATP-hydrolysing) [Homo sapiens]
          Length = 1288

 Score = 2591 bits (6715), Expect = 0.0
 Identities = 1288/1288 (100%), Positives = 1288/1288 (100%)

Query: 1    MGSPEGRFHFAIDRGGTFTDVFAQCPGGHVRVLKLLSEDPANYADAPTEGIRRILEQEAG 60
            MGSPEGRFHFAIDRGGTFTDVFAQCPGGHVRVLKLLSEDPANYADAPTEGIRRILEQEAG
Sbjct: 1    MGSPEGRFHFAIDRGGTFTDVFAQCPGGHVRVLKLLSEDPANYADAPTEGIRRILEQEAG 60

Query: 61   MLLPRDQPLDSSHIASIRMGTTVATNALLERKGERVALLVTRGFRDLLHIGTQARGDLFD 120
            MLLPRDQPLDSSHIASIRMGTTVATNALLERKGERVALLVTRGFRDLLHIGTQARGDLFD
Sbjct: 61   MLLPRDQPLDSSHIASIRMGTTVATNALLERKGERVALLVTRGFRDLLHIGTQARGDLFD 120

Query: 121  LAVPMPEVLYEEVLEVDERVVLHRGEAGTGTPVKGRTGDLLEVQQPVDLGALRGKLEGLL 180
            LAVPMPEVLYEEVLEVDERVVLHRGEAGTGTPVKGRTGDLLEVQQPVDLGALRGKLEGLL
Sbjct: 121  LAVPMPEVLYEEVLEVDERVVLHRGEAGTGTPVKGRTGDLLEVQQPVDLGALRGKLEGLL 180

Query: 181  SRGIRSLAVVLMHSYTWAQHEQQVGVLARELGFTHVSLSSEAMPMVRIVPRGHTACADAY 240
            SRGIRSLAVVLMHSYTWAQHEQQVGVLARELGFTHVSLSSEAMPMVRIVPRGHTACADAY
Sbjct: 181  SRGIRSLAVVLMHSYTWAQHEQQVGVLARELGFTHVSLSSEAMPMVRIVPRGHTACADAY 240

Query: 241  LTPAIQRYVQGFCRGFQGQLKDVQVLFMRSDGGLAPMDTFSGSSAVLSGPAGGVVGYSAT 300
            LTPAIQRYVQGFCRGFQGQLKDVQVLFMRSDGGLAPMDTFSGSSAVLSGPAGGVVGYSAT
Sbjct: 241  LTPAIQRYVQGFCRGFQGQLKDVQVLFMRSDGGLAPMDTFSGSSAVLSGPAGGVVGYSAT 300

Query: 301  TYQQEGGQPVIGFDMGGTSTDVSRYAGEFEHVFEASTAGVTLQAPQLDINTVAAGGGSRL 360
            TYQQEGGQPVIGFDMGGTSTDVSRYAGEFEHVFEASTAGVTLQAPQLDINTVAAGGGSRL
Sbjct: 301  TYQQEGGQPVIGFDMGGTSTDVSRYAGEFEHVFEASTAGVTLQAPQLDINTVAAGGGSRL 360

Query: 361  FFRSGLFVVGPESAGAHPGPACYRKGGPVTVTDANLVLGRLLPASFPCIFGPGENQPLSP 420
            FFRSGLFVVGPESAGAHPGPACYRKGGPVTVTDANLVLGRLLPASFPCIFGPGENQPLSP
Sbjct: 361  FFRSGLFVVGPESAGAHPGPACYRKGGPVTVTDANLVLGRLLPASFPCIFGPGENQPLSP 420

Query: 421  EASRKALEAVATEVNSFLTNGPCPASPLSLEEVAMGFVRVANEAMCRPIRALTQARGHDP 480
            EASRKALEAVATEVNSFLTNGPCPASPLSLEEVAMGFVRVANEAMCRPIRALTQARGHDP
Sbjct: 421  EASRKALEAVATEVNSFLTNGPCPASPLSLEEVAMGFVRVANEAMCRPIRALTQARGHDP 480

Query: 481  SAHVLACFGGAGGQHACAIARALGMDTVHIHRHSGLLSALGLALADVVHEAQEPCSLLYA 540
            SAHVLACFGGAGGQHACAIARALGMDTVHIHRHSGLLSALGLALADVVHEAQEPCSLLYA
Sbjct: 481  SAHVLACFGGAGGQHACAIARALGMDTVHIHRHSGLLSALGLALADVVHEAQEPCSLLYA 540

Query: 541  PETFVQLDQRLSRLEEQCVDALQAQGFPRSQISTESFLHLRYQGTDCALMVSAHQHPATA 600
            PETFVQLDQRLSRLEEQCVDALQAQGFPRSQISTESFLHLRYQGTDCALMVSAHQHPATA
Sbjct: 541  PETFVQLDQRLSRLEEQCVDALQAQGFPRSQISTESFLHLRYQGTDCALMVSAHQHPATA 600

Query: 601  RSPRAGDFGAAFVERYMREFGFVIPERPVVVDDVRVRGTGRSGLRLEDAPKAQTGPPRVD 660
            RSPRAGDFGAAFVERYMREFGFVIPERPVVVDDVRVRGTGRSGLRLEDAPKAQTGPPRVD
Sbjct: 601  RSPRAGDFGAAFVERYMREFGFVIPERPVVVDDVRVRGTGRSGLRLEDAPKAQTGPPRVD 660

Query: 661  KMTQCYFEGGYQETPVYLLAELGYGHKLHGPCLIIDSNSTILVEPGCQAEVTKTGDICIS 720
            KMTQCYFEGGYQETPVYLLAELGYGHKLHGPCLIIDSNSTILVEPGCQAEVTKTGDICIS
Sbjct: 661  KMTQCYFEGGYQETPVYLLAELGYGHKLHGPCLIIDSNSTILVEPGCQAEVTKTGDICIS 720

Query: 721  VGAEVPGTVGPQLDPIQLSIFSHRFMSIAEQMGRILQRTAISTNIKERLDFSCALFGPDG 780
            VGAEVPGTVGPQLDPIQLSIFSHRFMSIAEQMGRILQRTAISTNIKERLDFSCALFGPDG
Sbjct: 721  VGAEVPGTVGPQLDPIQLSIFSHRFMSIAEQMGRILQRTAISTNIKERLDFSCALFGPDG 780

Query: 781  GLVSNAPHIPVHLGAMQETVQFQIQHLGADLHPGDVLLSNHPSAGGSHLPDLTVITPVFW 840
            GLVSNAPHIPVHLGAMQETVQFQIQHLGADLHPGDVLLSNHPSAGGSHLPDLTVITPVFW
Sbjct: 781  GLVSNAPHIPVHLGAMQETVQFQIQHLGADLHPGDVLLSNHPSAGGSHLPDLTVITPVFW 840

Query: 841  PGQTRPVFYVASRGHHADIGGITPGSMPPHSTMLQQEGAVFLSFKLVQGGVFQEEAVTEA 900
            PGQTRPVFYVASRGHHADIGGITPGSMPPHSTMLQQEGAVFLSFKLVQGGVFQEEAVTEA
Sbjct: 841  PGQTRPVFYVASRGHHADIGGITPGSMPPHSTMLQQEGAVFLSFKLVQGGVFQEEAVTEA 900

Query: 901  LRAPGKVPNCSGTRNLHDNLSDLRAQVAANQKGIQLVGELIGQYGLDVVQAYMGHIQANA 960
            LRAPGKVPNCSGTRNLHDNLSDLRAQVAANQKGIQLVGELIGQYGLDVVQAYMGHIQANA
Sbjct: 901  LRAPGKVPNCSGTRNLHDNLSDLRAQVAANQKGIQLVGELIGQYGLDVVQAYMGHIQANA 960

Query: 961  ELAVRDMLRAFGTSRQARGLPLEVSSEDHMDDGSPIRLRVQISLSQGSAVFDFSGTGPEV 1020
            ELAVRDMLRAFGTSRQARGLPLEVSSEDHMDDGSPIRLRVQISLSQGSAVFDFSGTGPEV
Sbjct: 961  ELAVRDMLRAFGTSRQARGLPLEVSSEDHMDDGSPIRLRVQISLSQGSAVFDFSGTGPEV 1020

Query: 1021 FGNLNAPRAVTLSALIYCLRCLVGRDIPLNQGCLAPVRVVIPRGSILDPSPEAAVVGGNV 1080
            FGNLNAPRAVTLSALIYCLRCLVGRDIPLNQGCLAPVRVVIPRGSILDPSPEAAVVGGNV
Sbjct: 1021 FGNLNAPRAVTLSALIYCLRCLVGRDIPLNQGCLAPVRVVIPRGSILDPSPEAAVVGGNV 1080

Query: 1081 LTSQRVVDVILGAFGACAASQGCMNNVTLGNAHMGYYETVAGGAGAGPSWHGRSGVHSHM 1140
            LTSQRVVDVILGAFGACAASQGCMNNVTLGNAHMGYYETVAGGAGAGPSWHGRSGVHSHM
Sbjct: 1081 LTSQRVVDVILGAFGACAASQGCMNNVTLGNAHMGYYETVAGGAGAGPSWHGRSGVHSHM 1140

Query: 1141 TNTRITDPEILESRYPVILRRFELRRGSGGRGRFRGGDGVTRELLFREEALLSVLTERRA 1200
            TNTRITDPEILESRYPVILRRFELRRGSGGRGRFRGGDGVTRELLFREEALLSVLTERRA
Sbjct: 1141 TNTRITDPEILESRYPVILRRFELRRGSGGRGRFRGGDGVTRELLFREEALLSVLTERRA 1200

Query: 1201 FRPYGLHGGEPGARGLNLLIRKNGRTVNLGGKTSVTVYPGDVFCLHTPGGGGYGDPEDPA 1260
            FRPYGLHGGEPGARGLNLLIRKNGRTVNLGGKTSVTVYPGDVFCLHTPGGGGYGDPEDPA
Sbjct: 1201 FRPYGLHGGEPGARGLNLLIRKNGRTVNLGGKTSVTVYPGDVFCLHTPGGGGYGDPEDPA 1260

Query: 1261 PPPGSPPQALAFPEHGSVYEYRRAQEAV 1288
            PPPGSPPQALAFPEHGSVYEYRRAQEAV
Sbjct: 1261 PPPGSPPQALAFPEHGSVYEYRRAQEAV 1288


>gi|30039710 pancreas specific transcription factor, 1a [Homo sapiens]
          Length = 328

 Score = 32.7 bits (73), Expect = 2.3
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 16/55 (29%)

Query: 1239 PGDVFCLHTPGGGGYGDPEDP----------APP------PGSPPQALAFPEHGS 1277
            P     L  P  GG G+P+D           APP      PGSPP  LA+P  G+
Sbjct: 75   PAAPLALAPPSSGGLGEPDDGGGGGYCCETGAPPGGFPYSPGSPPSCLAYPCAGA 129


>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
          Length = 1759

 Score = 32.3 bits (72), Expect = 3.0
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 8/62 (12%)

Query: 1209 GEPGARGLNLLIRKNGRTVNLGGKTSVTVYPGDVFCLHTPGGG---GYGDPEDPAPPPGS 1265
            GEP A G        G  ++L G  S+   PG +  L +   G     GD  DP PP  +
Sbjct: 1601 GEPAAEG-----PAPGPPISLDGSLSLGAEPGSLLFLQSAAAGLGLALGDAGDPGPPDAA 1655

Query: 1266 PP 1267
             P
Sbjct: 1656 AP 1657


>gi|48976054 hypothetical protein LOC79886 [Homo sapiens]
          Length = 361

 Score = 32.3 bits (72), Expect = 3.0
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 1092 GAFGACAASQGCMNNVTLGNAHMGYYETVAGGAGAGPSWHGRSGVHSHMTNTRITD 1147
            G+   C ++ GC +    GNA+  +  +V GG   G  W G S   S     R TD
Sbjct: 38   GSTSGCGSAGGCGSVSCCGNAN--FSGSVTGGGSGGSCWGGSSVERSERRKRRSTD 91


>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
          Length = 2285

 Score = 32.3 bits (72), Expect = 3.0
 Identities = 17/41 (41%), Positives = 20/41 (48%)

Query: 1248 PGGGGYGDPEDPAPPPGSPPQALAFPEHGSVYEYRRAQEAV 1288
            PGGGG G  +    PP S   AL  P +G    Y R+  AV
Sbjct: 121  PGGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAV 161


>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
          Length = 2068

 Score = 32.3 bits (72), Expect = 3.0
 Identities = 17/41 (41%), Positives = 20/41 (48%)

Query: 1248 PGGGGYGDPEDPAPPPGSPPQALAFPEHGSVYEYRRAQEAV 1288
            PGGGG G  +    PP S   AL  P +G    Y R+  AV
Sbjct: 121  PGGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAV 161


>gi|217035081 aarF domain containing kinase 1 isoform b [Homo
           sapiens]
          Length = 455

 Score = 32.0 bits (71), Expect = 3.9
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 10/61 (16%)

Query: 779 DGGLVSNAPH----------IPVHLGAMQETVQFQIQHLGADLHPGDVLLSNHPSAGGSH 828
           DGG V++  +          I  HLG M   + F    +  D HPG+VL+  HP  G + 
Sbjct: 199 DGGQVNDRDYMERNKIDVNEISRHLGKMYSEMIFVNGFVHCDPHPGNVLVRKHPGTGKAE 258

Query: 829 L 829
           +
Sbjct: 259 I 259


>gi|40254938 aarF domain containing kinase 1 isoform a [Homo
           sapiens]
          Length = 523

 Score = 32.0 bits (71), Expect = 3.9
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 10/61 (16%)

Query: 779 DGGLVSNAPH----------IPVHLGAMQETVQFQIQHLGADLHPGDVLLSNHPSAGGSH 828
           DGG V++  +          I  HLG M   + F    +  D HPG+VL+  HP  G + 
Sbjct: 267 DGGQVNDRDYMERNKIDVNEISRHLGKMYSEMIFVNGFVHCDPHPGNVLVRKHPGTGKAE 326

Query: 829 L 829
           +
Sbjct: 327 I 327


>gi|62865637 AT rich interactive domain 3C (BRIGHT- like) [Homo
            sapiens]
          Length = 412

 Score = 32.0 bits (71), Expect = 3.9
 Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 14/79 (17%)

Query: 1195 LTERRAFRPYGLHGGEPGARGLNLLIRKNGRTVNLGGKTSVTVYPGDVFCLHTPGGGGYG 1254
            L E R   P  L G   G   +N+ +  NG            VY G +F    P     G
Sbjct: 348  LREERLDGPLNLAGS--GISSINMALEING-----------VVYTGVLFARRQPVPASQG 394

Query: 1255 DPEDPAPPPGSPPQALAFP 1273
             P +PAPPP + P +   P
Sbjct: 395  -PTNPAPPPSTGPPSSILP 412


>gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 324

 Score = 31.6 bits (70), Expect = 5.1
 Identities = 34/111 (30%), Positives = 39/111 (35%), Gaps = 4/111 (3%)

Query: 1167 GSGGRGRFRGGDGVTRELLFREEALLSVLTERRAFR-PYGLHGG--EPGARGLNLL-IRK 1222
            G  G G   GG G+         A  S    RR  R P G  GG   PG RG     +  
Sbjct: 135  GPKGIGMKGGGPGLPPRGKASGPARDSAQQRRRPTRRPRGTRGGARRPGVRGQGAAAVGP 194

Query: 1223 NGRTVNLGGKTSVTVYPGDVFCLHTPGGGGYGDPEDPAPPPGSPPQALAFP 1273
             G        +  T  PG    L +P  G    P  P  PP   P+AL  P
Sbjct: 195  TGPRPTGAPPSRRTPPPGPRRPLRSPHSGSGWTPARPPSPPAGAPEALRPP 245


>gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 324

 Score = 31.6 bits (70), Expect = 5.1
 Identities = 34/111 (30%), Positives = 39/111 (35%), Gaps = 4/111 (3%)

Query: 1167 GSGGRGRFRGGDGVTRELLFREEALLSVLTERRAFR-PYGLHGG--EPGARGLNLL-IRK 1222
            G  G G   GG G+         A  S    RR  R P G  GG   PG RG     +  
Sbjct: 135  GPKGIGMKGGGPGLPPRGKASGPARDSAQQRRRPTRRPRGTRGGARRPGVRGQGAAAVGP 194

Query: 1223 NGRTVNLGGKTSVTVYPGDVFCLHTPGGGGYGDPEDPAPPPGSPPQALAFP 1273
             G        +  T  PG    L +P  G    P  P  PP   P+AL  P
Sbjct: 195  TGPRPTGAPPSRRTPPPGPRRPLRSPHSGSGWTPARPPSPPAGAPEALRPP 245


>gi|113413437 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 324

 Score = 31.6 bits (70), Expect = 5.1
 Identities = 34/111 (30%), Positives = 39/111 (35%), Gaps = 4/111 (3%)

Query: 1167 GSGGRGRFRGGDGVTRELLFREEALLSVLTERRAFR-PYGLHGG--EPGARGLNLL-IRK 1222
            G  G G   GG G+         A  S    RR  R P G  GG   PG RG     +  
Sbjct: 135  GPKGIGMKGGGPGLPPRGKASGPARDSAQQRRRPTRRPRGTRGGARRPGVRGQGAAAVGP 194

Query: 1223 NGRTVNLGGKTSVTVYPGDVFCLHTPGGGGYGDPEDPAPPPGSPPQALAFP 1273
             G        +  T  PG    L +P  G    P  P  PP   P+AL  P
Sbjct: 195  TGPRPTGAPPSRRTPPPGPRRPLRSPHSGSGWTPARPPSPPAGAPEALRPP 245


>gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo
            sapiens]
          Length = 1691

 Score = 31.2 bits (69), Expect = 6.7
 Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 4/66 (6%)

Query: 1209 GEPGARGLNLLIRKNGRTVNLGGKTSVTVYPGDVFCLHTPGGGGYGDPEDPAPPPGSPPQ 1268
            G PG  GL  L  + G     GG   +   PG       PG  G+   + P  PPGSP  
Sbjct: 1190 GNPGPPGLPGLSGQKGD----GGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGP 1245

Query: 1269 ALAFPE 1274
            AL  P+
Sbjct: 1246 ALEGPK 1251


>gi|24797153 faciogenital dysplasia protein [Homo sapiens]
          Length = 961

 Score = 31.2 bits (69), Expect = 6.7
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 1248 PGGGGYGDPEDPAP-PPGSPPQALAFPEHGS 1277
            PGG G  +PE PA  PPG+ P A A  + G+
Sbjct: 7    PGGAGPSEPEHPATNPPGAAPPACADSDPGA 37


>gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo
            sapiens]
          Length = 1685

 Score = 31.2 bits (69), Expect = 6.7
 Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 4/66 (6%)

Query: 1209 GEPGARGLNLLIRKNGRTVNLGGKTSVTVYPGDVFCLHTPGGGGYGDPEDPAPPPGSPPQ 1268
            G PG  GL  L  + G     GG   +   PG       PG  G+   + P  PPGSP  
Sbjct: 1190 GNPGPPGLPGLSGQKGD----GGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGP 1245

Query: 1269 ALAFPE 1274
            AL  P+
Sbjct: 1246 ALEGPK 1251


>gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo
            sapiens]
          Length = 1688

 Score = 31.2 bits (69), Expect = 6.7
 Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 4/66 (6%)

Query: 1209 GEPGARGLNLLIRKNGRTVNLGGKTSVTVYPGDVFCLHTPGGGGYGDPEDPAPPPGSPPQ 1268
            G PG  GL  L  + G     GG   +   PG       PG  G+   + P  PPGSP  
Sbjct: 1190 GNPGPPGLPGLSGQKGD----GGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGP 1245

Query: 1269 ALAFPE 1274
            AL  P+
Sbjct: 1246 ALEGPK 1251


>gi|206725452 leukocyte receptor cluster (LRC) member 9 [Homo
           sapiens]
          Length = 501

 Score = 31.2 bits (69), Expect = 6.7
 Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 18/144 (12%)

Query: 701 ILVEPGCQAEVTKTGDICISVGAEVPGTVGPQLDPIQLSIFSHRFMSIAEQMGRI--LQR 758
           ++ EPG QAEVTK  +  + V       + P  + + L++   R     E+   I  L+R
Sbjct: 327 MVTEPGLQAEVTKAQEYLVHVAPHCANFLVPSQN-LHLTLALLRLAGAGEEAAAIGALRR 385

Query: 759 TAIS--TNIKERLDF-SCALFGPDGGLVSNAPHIPVHLGAMQETVQFQIQHLG------- 808
             ++   N   RL F    L GP    V  AP  P  L +M + +  +++  G       
Sbjct: 386 ALLAPGLNAPPRLSFRKLVLLGPH---VLCAPPSPT-LESMAQVLSQRLEAEGLSTLQSP 441

Query: 809 ADLHPGDVLLSNHPSAGGSHLPDL 832
             LHP  + ++  P     HLP L
Sbjct: 442 GQLHP-HLTVAKVPHGSQVHLPKL 464


>gi|169167211 PREDICTED: FRAS1 related extracellular matrix 3 [Homo
           sapiens]
          Length = 2139

 Score = 30.8 bits (68), Expect = 8.7
 Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 6/43 (13%)

Query: 375 GAHPGPACYRKGGPVTVTDANLVL-GRLLPASFPCIFGPGENQ 416
           G  PG  C      VTV DA   L G L P  FPC FGP + Q
Sbjct: 88  GVQPGDRC-----EVTVLDALPRLKGALSPRRFPCTFGPRQVQ 125


>gi|169166904 PREDICTED: FRAS1 related extracellular matrix 3 [Homo
           sapiens]
          Length = 2139

 Score = 30.8 bits (68), Expect = 8.7
 Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 6/43 (13%)

Query: 375 GAHPGPACYRKGGPVTVTDANLVL-GRLLPASFPCIFGPGENQ 416
           G  PG  C      VTV DA   L G L P  FPC FGP + Q
Sbjct: 88  GVQPGDRC-----EVTVLDALPRLKGALSPRRFPCTFGPRQVQ 125


>gi|169166334 PREDICTED: FRAS1 related extracellular matrix 3 [Homo
           sapiens]
          Length = 2139

 Score = 30.8 bits (68), Expect = 8.7
 Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 6/43 (13%)

Query: 375 GAHPGPACYRKGGPVTVTDANLVL-GRLLPASFPCIFGPGENQ 416
           G  PG  C      VTV DA   L G L P  FPC FGP + Q
Sbjct: 88  GVQPGDRC-----EVTVLDALPRLKGALSPRRFPCTFGPRQVQ 125


>gi|77681565 NG5 protein [Homo sapiens]
          Length = 306

 Score = 30.8 bits (68), Expect = 8.7
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 1253 YGDPEDPAPPPGSPPQALAFPEHGSVYEYRRAQEA 1287
            Y  P+ PA PP  PPQA     H   + Y ++  A
Sbjct: 20   YNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTA 54


>gi|13569901 TSC22 domain family, member 4 [Homo sapiens]
          Length = 395

 Score = 30.8 bits (68), Expect = 8.7
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 1247 TPGGGGYGDPEDPAPPPGSPPQALAFPE--HGSVYEYRRAQ 1285
            +P  GG G P + +PPPG+P       +  HG    YRR +
Sbjct: 49   SPDPGGKGTPRNGSPPPGAPSSRFRVVKLPHGLGEPYRRGR 89


>gi|79749430 FRAS1-related extracellular matrix protein 2 precursor
           [Homo sapiens]
          Length = 3169

 Score = 30.8 bits (68), Expect = 8.7
 Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 8/40 (20%)

Query: 378 PGPACYRKGGPVTVTDANLVL---GRLLPASFPCIFGPGE 414
           PG  C      V+V D + +    GRL P  FPC FGPGE
Sbjct: 101 PGDRC-----AVSVLDNDALAQRPGRLSPKRFPCDFGPGE 135


>gi|157885806 chromosome 12 open reading frame 51 [Homo sapiens]
          Length = 3996

 Score = 30.8 bits (68), Expect = 8.7
 Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 15/63 (23%)

Query: 1219 LIRKNGRTVNLGGKT---------SVTVYPGDVFCLHTPGGGGYGDPEDPAPPPGSPPQA 1269
            L   NGR V+  G +          VT+ PGDV       G G+   E   PPPG P + 
Sbjct: 2037 LFHNNGRAVHYNGSSLLQWKSVRLDVTLSPGDV------AGIGWERTEGTPPPPGQPAKG 2090

Query: 1270 LAF 1272
              +
Sbjct: 2091 RVY 2093


>gi|115387099 brain-specific angiogenesis inhibitor 2 [Homo sapiens]
          Length = 1585

 Score = 30.8 bits (68), Expect = 8.7
 Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 3/71 (4%)

Query: 1209 GEPGARGLNLLIRKNGRTVNLGGKTSVTVYPGDVFCLHTPGGGGYGDPEDPAPPPGSPPQ 1268
            GE G R L+L      R    G +    V P     L   GGGG G+    A P G+P +
Sbjct: 1328 GEGGLRQLDLTWL---RPTEPGSEGDYMVLPRRTLSLQPGGGGGGGEDAPRARPEGTPRR 1384

Query: 1269 ALAFPEHGSVY 1279
            A     H   Y
Sbjct: 1385 AAKTVAHTEGY 1395


>gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]
          Length = 744

 Score = 30.8 bits (68), Expect = 8.7
 Identities = 27/78 (34%), Positives = 32/78 (41%), Gaps = 13/78 (16%)

Query: 1203 PYGLHG-------GEPGARGLNLLIRKNGRTVNLG----GKTSVTVYPGDVFCLHTPGGG 1251
            P GL G       G PGA G+      +G    +G    GK  VT +PG    L  PG  
Sbjct: 233  PQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAP 292

Query: 1252 GYGDPEDPAPPPG--SPP 1267
            G   P+ P   PG   PP
Sbjct: 293  GEPGPQGPIGVPGVQGPP 310


>gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]
          Length = 744

 Score = 30.8 bits (68), Expect = 8.7
 Identities = 27/78 (34%), Positives = 32/78 (41%), Gaps = 13/78 (16%)

Query: 1203 PYGLHG-------GEPGARGLNLLIRKNGRTVNLG----GKTSVTVYPGDVFCLHTPGGG 1251
            P GL G       G PGA G+      +G    +G    GK  VT +PG    L  PG  
Sbjct: 233  PQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAP 292

Query: 1252 GYGDPEDPAPPPG--SPP 1267
            G   P+ P   PG   PP
Sbjct: 293  GEPGPQGPIGVPGVQGPP 310


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.138    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,062,496
Number of Sequences: 37866
Number of extensions: 2776836
Number of successful extensions: 9211
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 9160
Number of HSP's gapped (non-prelim): 65
length of query: 1288
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1174
effective length of database: 13,930,794
effective search space: 16354752156
effective search space used: 16354752156
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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