Guide to the Human Genome
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Name: ARHGEF10 Sequence: fasta or formatted (1344aa) NCBI GI: 62548864
Description:

Rho guanine nucleotide exchange factor 10

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         96           2
 C cysteine            1.5         20           2
 D aspartate           5.4         73           2
 E glutamate           8.4        113           4
 F phenylalanine       2.5         33           2
 G glycine             6.0         80           2
 H histidine           2.9         39           1
 I isoleucine          4.2         57           2
 K lysine              5.7         77           2
 L leucine             9.4        127           3
 M methionine          2.8         37           2
 N asparagine          3.5         47           3
 P proline             6.4         86           2
 Q glutamine           4.9         66           3
 R arginine            4.7         63           2
 S serine              9.4        126           4
 T threonine           4.5         61           2
 V valine              7.1         96           2
 W tryptophan          1.0         14           1
 Y tyrosine            2.5         33           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Rho guanine nucleotide exchange factor 10 
ARHGEF10L             0.342   Rho guanine nucleotide exchange factor (GEF) 10-like...
ARHGEF10L             0.325   Rho guanine nucleotide exchange factor (GEF) 10-like...
ARHGEF17              0.053   Rho guanine nucleotide exchange factor (GEF) 17 [Hom...
ECT2                  0.033   epithelial cell transforming sequence 2 oncogene pro...
BCR                   0.032   breakpoint cluster region isoform 2 
BCR                   0.032   breakpoint cluster region isoform 1 
MAPK8IP3              0.029   mitogen-activated protein kinase 8 interacting prote...
MAPK8IP3              0.029   mitogen-activated protein kinase 8 interacting prote...
ABR                   0.028   active breakpoint cluster region-related  protein i...
ABR                   0.028   active breakpoint cluster region-related  protein is...
ABR                   0.028   active breakpoint cluster region-related  protein is...
SPAG9                 0.028   sperm associated antigen 9 isoform 1 
SPAG9                 0.028   sperm associated antigen 9 isoform 3 
ITSN1                 0.024   intersectin 1 isoform ITSN-l 
FGD6                  0.022   FYVE, RhoGEF and PH domain containing 6 
ITSN2                 0.021   intersectin 2 isoform 3 
ITSN2                 0.021   intersectin 2 isoform 1 
ECT2L                 0.021   epithelial cell transforming sequence 2 oncogene-li...
RASGRF2               0.021   Ras protein-specific guanine nucleotide-releasing fa...
RASGRF1               0.020   Ras protein-specific guanine nucleotide-releasing f...
RASGRF1               0.020   Ras protein-specific guanine nucleotide-releasing fa...
FGD2                  0.020   FYVE, RhoGEF and PH domain containing 2 
PREX1                 0.019   phosphatidylinositol-3,4,5-trisphosphate-dependent R...
ARHGEF4               0.019   Rho guanine nucleotide exchange factor 4 isoform a [...
ARHGEF4               0.019   Rho guanine nucleotide exchange factor 4 isoform b [...
SGEF                  0.018   Src homology 3 domain-containing guanine nucleotide...
PLEKHG2               0.017   common-site lymphoma/leukemia guanine nucleotide ex...
FGD5                  0.017   FYVE, RhoGEF and PH domain containing 5 
VAV3                  0.017   vav 3 guanine nucleotide exchange factor isoform 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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