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Search of human proteins with 4759212
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4759212 tubulin-specific chaperone a [Homo sapiens]
(108 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4759212 tubulin-specific chaperone a [Homo sapiens] 209 4e-55
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 37 0.004
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 37 0.004
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 37 0.004
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 36 0.008
gi|154354979 myosin X [Homo sapiens] 36 0.008
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 36 0.008
gi|110349797 homer 2 isoform 4 [Homo sapiens] 35 0.010
gi|110349794 homer 2 isoform 3 [Homo sapiens] 35 0.010
gi|120431745 huntingtin-associated protein 1 isoform 4 [Homo sap... 35 0.017
gi|120431743 huntingtin-associated protein 1 isoform 3 [Homo sap... 35 0.017
gi|120431738 huntingtin-associated protein 1 isoform 2 [Homo sap... 35 0.017
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 34 0.029
gi|24308223 hypothetical protein LOC57577 [Homo sapiens] 34 0.029
gi|24234699 keratin 19 [Homo sapiens] 33 0.038
gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens] 33 0.038
gi|238908495 similar to pleckstrin homology domain protein (5V32... 33 0.049
gi|14589862 aspartate beta-hydroxylase isoform d [Homo sapiens] 33 0.049
gi|9910364 aspartate beta-hydroxylase isoform e [Homo sapiens] 33 0.049
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li... 33 0.049
gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens] 33 0.049
gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens] 33 0.049
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa... 33 0.049
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s... 33 0.049
gi|41152097 DNA segment on chromosome X and Y (unique) 155 expre... 33 0.049
gi|22758136 MAP7 domain containing 2 [Homo sapiens] 33 0.049
gi|237858799 adenylate kinase domain containing 1 isoform 1 [Hom... 33 0.065
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 33 0.065
gi|44890052 stathmin 1 isoform a [Homo sapiens] 32 0.084
gi|44890050 stathmin 1 isoform a [Homo sapiens] 32 0.084
>gi|4759212 tubulin-specific chaperone a [Homo sapiens]
Length = 108
Score = 209 bits (532), Expect = 4e-55
Identities = 108/108 (100%), Positives = 108/108 (100%)
Query: 1 MADPRVRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQES 60
MADPRVRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQES
Sbjct: 1 MADPRVRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQES 60
Query: 61 RMMIPDCQRRLEAAYLDLQRILENEKDLEEAEEYKEARLVLDSVKLEA 108
RMMIPDCQRRLEAAYLDLQRILENEKDLEEAEEYKEARLVLDSVKLEA
Sbjct: 61 RMMIPDCQRRLEAAYLDLQRILENEKDLEEAEEYKEARLVLDSVKLEA 108
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 36.6 bits (83), Expect = 0.004
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 14/102 (13%)
Query: 5 RVRQIKIKTGVVKRLVKEKVMYEKEAKQQE------EKIEKMRAEDGENYD----IKKQA 54
R ++ KI+ K +E++M+EKE K + EK EKMR ++ ++ +++Q
Sbjct: 324 REQEEKIREQEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMRRQE 383
Query: 55 EILQESRMMIPDCQRRLEAAYLDLQRILENEKDLEEAEEYKE 96
E++ E I R LE + ++I E E+ +E E+ +E
Sbjct: 384 EMMWEKEEKI----RELEEKMHEQEKIREQEEKRQEEEKIRE 421
Score = 36.2 bits (82), Expect = 0.006
Identities = 22/93 (23%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 7 RQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPD 66
++ KI+ K +EK+ ++E +Q+EEKI + + + +Q E ++E I +
Sbjct: 389 KEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIRE 448
Query: 67 CQRRL---EAAYLDLQRILENEKDLEEAEEYKE 96
++++ E + ++I E EK E+ E +++
Sbjct: 449 QEKKMWRQEEKIHEQEKIREEEKRQEQEEMWRQ 481
Score = 31.2 bits (69), Expect = 0.19
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 21 KEKVMYEKEAKQQEEKIEKMRAED---GENYDIKKQAEILQESRMMIPDCQRRLEAAYLD 77
+E+ M E+E K QE++ R E+ + I++Q E ++E M+ Q + E +
Sbjct: 652 QEEKMCEQEEKMQEQEETMWRQEEKIREQEKKIREQEEKIREQEEMM---QEQEEKMWEQ 708
Query: 78 LQRILENEKDLEEAEE 93
+++ E E+ ++E EE
Sbjct: 709 EEKMCEQEEKMQEQEE 724
Score = 30.0 bits (66), Expect = 0.42
Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 5 RVRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMI 64
R ++ KI+ K +E+ ++E+E ++EEK ++ + I +Q EI ++ M
Sbjct: 440 REQEEKIREQEKKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIHEQEEIWRQKEKMH 499
Query: 65 PD---CQRRLEAAYLDLQRILENEKDLEEAEE 93
+++ E + ++I E E+ + E EE
Sbjct: 500 EQEEKIRKQEEKVWRQEEKIREQEEKIREQEE 531
Score = 28.1 bits (61), Expect = 1.6
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 10 KIKTGVVKRLVKEKVMYEKEAK--QQEEKIEKMRAEDGENYD-IKKQAEILQESRMMIPD 66
KI+ KR +E+ M+++E K +QEEKI++ + E + I++Q E+ QE + +
Sbjct: 592 KIREQEEKRQEQEEKMWKQEEKIREQEEKIQEQEEKIREQEEKIREQEEMTQEQEEKMGE 651
Query: 67 CQRRL------------------EAAYLDLQRILENEKDLEEAEE 93
+ ++ E ++I E E+ + E EE
Sbjct: 652 QEEKMCEQEEKMQEQEETMWRQEEKIREQEKKIREQEEKIREQEE 696
Score = 26.2 bits (56), Expect = 6.0
Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 10 KIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQR 69
KI+ K +E+ + E+E K+QE++ + + E+ I++Q E +QE I + +
Sbjct: 578 KIREQEEKVWRQEEKIREQEEKRQEQEEKMWKQEE----KIREQEEKIQEQEEKIREQEE 633
Query: 70 RL----EAAYLDLQRILENEKDLEEAEE 93
++ E +++ E E+ + E EE
Sbjct: 634 KIREQEEMTQEQEEKMGEQEEKMCEQEE 661
Score = 26.2 bits (56), Expect = 6.0
Identities = 15/43 (34%), Positives = 29/43 (67%), Gaps = 5/43 (11%)
Query: 21 KEKVMYEKEAKQQEEKIEKMRAEDGENYD----IKKQAEILQE 59
+E+ M E+E K QE++ EKMR ++ + ++ +++Q E +QE
Sbjct: 708 QEEKMCEQEEKMQEQE-EKMRRQEEKMWEQEVRLRQQEEKMQE 749
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 36.6 bits (83), Expect = 0.004
Identities = 22/103 (21%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 7 RQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPD 66
++ KI+ K +EK+ ++E +Q+EEKI + + + +Q E ++E I +
Sbjct: 375 KEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIRE 434
Query: 67 CQRRL---EAAYLDLQRILENEKDLEEAEEYKEARLVLDSVKL 106
++++ E + ++I E EK E+ E +++ + + ++
Sbjct: 435 QEKKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEI 477
Score = 34.7 bits (78), Expect = 0.017
Identities = 24/91 (26%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 5 RVRQIKIKTGVVKRLVKEKVMYEKEAK--QQEEKIEKMRAEDGENYDIKKQAEILQESRM 62
R ++ KI+ K +E++M E+E K +QEEK+++ + I++Q E ++E +
Sbjct: 526 REQEEKIREQEEKIREQEEMMQEQEEKMGEQEEKMQEQEKMRRQEEKIREQEEKIREQKE 585
Query: 63 MIPDCQRRLEAAYLDLQRILENEKDLEEAEE 93
I + + ++ + ++I E E+ ++E EE
Sbjct: 586 KIREQEEKI---WEQEEKIREQEEMMQEQEE 613
Score = 32.3 bits (72), Expect = 0.084
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 5 RVRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMI 64
R ++ KI+ K +E++M+EKE EKMR ++ ++ +++ L+E
Sbjct: 324 REQEEKIREQEEKMRRQEEMMWEKE--------EKMRRQEEMMWEKEEKMRRLEEMMWEK 375
Query: 65 PDCQRRLEAAYLDLQRILENEKDLEEAEEYKE 96
+ R LE + ++I E E+ +E E+ +E
Sbjct: 376 EEKIRELEEKMHEQEKIREQEEKRQEEEKIRE 407
Score = 29.3 bits (64), Expect = 0.71
Identities = 24/97 (24%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 5 RVRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMI 64
R ++ KI+ K +E+ ++E+E K +E+ E+M E E +++ QE +M
Sbjct: 574 REQEEKIREQKEKIREQEEKIWEQEEKIREQ--EEMMQEQEEKMWEQEEKMCEQEEKMQE 631
Query: 65 PD--CQRRLEAAYLDLQRILENEKDLEEAEEYKEARL 99
+ +R+ E + R+ + E+ ++E +E+ EA +
Sbjct: 632 QEEKMRRQEEKMWEQEVRLRQQEEKMQEHQEHLEAAI 668
Score = 28.9 bits (63), Expect = 0.93
Identities = 20/91 (21%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 5 RVRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMI 64
R ++ KI+ K +E+ ++E+E ++EEK ++ + I++Q EI ++ M
Sbjct: 426 REQEEKIREQEKKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEIWRQKEKMH 485
Query: 65 PD--CQRRLEAAYLDLQRILENEKDLEEAEE 93
+++ E + +++ + E+ + E EE
Sbjct: 486 EQEKIRKQEEKVWRQEEKMHDQEEKIREQEE 516
Score = 28.5 bits (62), Expect = 1.2
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 18/75 (24%)
Query: 27 EKEAKQQEEKI----EKMRAEDGENYD----IKKQAEILQESRMMIPDCQRRLEAAYLDL 78
E++ ++QEEKI EK+R ++ + ++ I++Q E++QE E +
Sbjct: 570 EEKIREQEEKIREQKEKIREQEEKIWEQEEKIREQEEMMQEQE----------EKMWEQE 619
Query: 79 QRILENEKDLEEAEE 93
+++ E E+ ++E EE
Sbjct: 620 EKMCEQEEKMQEQEE 634
Score = 27.7 bits (60), Expect = 2.1
Identities = 18/75 (24%), Positives = 41/75 (54%), Gaps = 12/75 (16%)
Query: 21 KEKVMYEKEAK--QQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLEAAYLDL 78
+E+ M+ +E K +QEEKI + + I++Q E++QE + + + +++ +
Sbjct: 514 QEEKMWRQEEKIREQEEKIREQEEK------IREQEEMMQEQEEKMGEQEEKMQ----EQ 563
Query: 79 QRILENEKDLEEAEE 93
+++ E+ + E EE
Sbjct: 564 EKMRRQEEKIREQEE 578
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 36.6 bits (83), Expect = 0.004
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 21 KEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLEAAYLDLQR 80
KE+ ++ K+QE++ EK R +D E +K+ E+ +E + R + +L+R
Sbjct: 511 KEREREKELEKEQEQEREKEREKDRERQQ-EKEKELEKEQEKQREMEKERKQEKEKELER 569
Query: 81 ILENEKDLEE-AEEYKEARLVLDSVKLE 107
E EK+L++ E+ KE L + KLE
Sbjct: 570 QKEKEKELQKMKEQEKECELEKEREKLE 597
Score = 28.1 bits (61), Expect = 1.6
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 13/94 (13%)
Query: 5 RVRQIKIKTGVVKRLVKEKVMYEKEAKQQEEK-IEKMRAEDGENYDIKKQAEILQESRMM 63
R RQ + + + K K++ M EKE KQ++EK +E+ + ++ E +K+Q +
Sbjct: 535 RERQQEKEKELEKEQEKQREM-EKERKQEKEKELERQKEKEKELQKMKEQEK-------- 585
Query: 64 IPDCQRRLEAAYLDLQRILENEKDLEEAEEYKEA 97
+C+ E L+ ++I E +LE E +E+
Sbjct: 586 --ECELEKEREKLE-EKIEPREPNLEPMVEKQES 616
>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
protein 6 [Homo sapiens]
Length = 724
Score = 35.8 bits (81), Expect = 0.008
Identities = 22/103 (21%), Positives = 52/103 (50%), Gaps = 3/103 (2%)
Query: 7 RQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPD 66
++ KI+ K +EK+ ++E +Q+EEKI + + + +Q E ++E I +
Sbjct: 436 KEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIRE 495
Query: 67 CQRRL---EAAYLDLQRILENEKDLEEAEEYKEARLVLDSVKL 106
+ ++ E + ++I E EK E+ E +++ + + ++
Sbjct: 496 QEEKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEI 538
Score = 34.3 bits (77), Expect = 0.022
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 5 RVRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMI 64
R ++ KI+ K +E++M+EKE K + + E+M E E +++Q E++ E I
Sbjct: 385 REQEEKIREQEEKMRRQEEMMWEKEEKMRRQ--EEMMWEKEEK--MRRQEEMMWEKEEKI 440
Query: 65 PDCQRRLEAAYLDLQRILENEKDLEEAEEYKE 96
R LE + ++I E E+ +E E+ +E
Sbjct: 441 ----RELEEKMHEQEKIREQEEKRQEEEKIRE 468
Score = 33.1 bits (74), Expect = 0.049
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 21 KEKVMYEKEAKQQEEKIEKMRAED----GENYDIKKQAEILQESRMMIPDCQRRLEAAYL 76
+E+ M E+E K QE++ EKMR ++ + I++Q E ++E M+ Q + E +
Sbjct: 618 QEEKMCEQEEKMQEQE-EKMRRQEEKIREQEKKIREQEEKIREQEEMM---QEQEEKMWE 673
Query: 77 DLQRILENEKDLEEAEE 93
+++ E E+ ++E EE
Sbjct: 674 QEEKMCEQEEKMQEQEE 690
Score = 27.3 bits (59), Expect = 2.7
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 21 KEKVMYEKEA-KQQEEKIEKMRAEDGENYDIKKQAEIL---QESRMMIPD--CQRRLEAA 74
+EKV ++E ++QEEKI + + E ++ ++ E QE +M + Q + E
Sbjct: 577 EEKVWRQEEKIREQEEKIREQEEKIREQEEMTQEQEEKMGEQEEKMCEQEEKMQEQEEKM 636
Query: 75 YLDLQRILENEKDLEEAEE 93
++I E EK + E EE
Sbjct: 637 RRQEEKIREQEKKIREQEE 655
Score = 27.3 bits (59), Expect = 2.7
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 21 KEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPD--CQRRLEAAYLDL 78
+EK + E+E K +E+ E+M E E +++ QE +M + +R+ E +
Sbjct: 646 QEKKIREQEEKIREQ--EEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKMRRQEEKMWEQE 703
Query: 79 QRILENEKDLEEAEEYKEARL 99
R+ + E+ ++E +E+ EA +
Sbjct: 704 VRLRQQEEKMQEHQEHLEAAI 724
Score = 26.6 bits (57), Expect = 4.6
Identities = 19/92 (20%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 5 RVRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMI 64
R ++ KI+ K +E+ ++E+E ++EEK ++ + I++Q EI ++ +
Sbjct: 487 REQEEKIREQEEKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEIWRQKEKIH 546
Query: 65 PD---CQRRLEAAYLDLQRILENEKDLEEAEE 93
+++ E + +++ + E+ + E EE
Sbjct: 547 EQEEKIRKQEEKMWRQEEKMHDQEEKIREQEE 578
Score = 25.8 bits (55), Expect = 7.9
Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 8 QIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDC 67
Q KI+ ++ +E E++ ++QEE + + I+KQ E + + D
Sbjct: 510 QEKIREEEKRQEQEEMWRQEEKIREQEEIWRQKEKIHEQEEKIRKQEEKMWRQEEKMHDQ 569
Query: 68 QRRL----EAAYLDLQRILENEKDLEEAEE 93
+ ++ E + ++I E E+ + E EE
Sbjct: 570 EEKIREQEEKVWRQEEKIREQEEKIREQEE 599
>gi|154354979 myosin X [Homo sapiens]
Length = 2058
Score = 35.8 bits (81), Expect = 0.008
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 13/102 (12%)
Query: 10 KIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEIL----QESRMMIP 65
+I V ++L+ EK E++ KQ+EE+ +K E+ E +++AE+ +E+R
Sbjct: 802 QIARRVYRQLLAEKREQEEKKKQEEEEKKKREEEERERERERREAELRAQQEEETRK--- 858
Query: 66 DCQRRLEAAYLDLQRILENEKDLEEAEEYKEARLVLDSVKLE 107
Q+ LEA LQ+ + + E E+ KE + V + ++LE
Sbjct: 859 --QQELEA----LQKSQKEAELTRELEKQKENKQVEEILRLE 894
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 35.8 bits (81), Expect = 0.008
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Query: 10 KIKTGVVKRLVKEKVMY---EKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPD 66
KI+T ++++ K ++ E +AK+ +E+I++++ E E +K EI +ESR
Sbjct: 1424 KIQTEIIEQEDLIKALHTQLEMQAKEHDERIKQLQVELCEMK--QKPEEIGEESRAK-QQ 1480
Query: 67 CQRRLEAAYLDLQRILENEKDLEE 90
QR+L+AA + + L+ K L+E
Sbjct: 1481 IQRKLQAALISRKEALKENKSLQE 1504
Score = 34.3 bits (77), Expect = 0.022
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 12/89 (13%)
Query: 17 KRLVKEKVMYEKEAKQQE-EKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQR---RLE 72
++LVKEK E E +++ EKI+ + E G K+ E+L+E + + Q+ R +
Sbjct: 1973 QQLVKEKTKVESEIRKEYLEKIQGAQKEPGNKSHAKELQELLKEKQQEVKQLQKDCIRYQ 2032
Query: 73 AAYLDLQRIL--------ENEKDLEEAEE 93
L+R + E++KDLE +E
Sbjct: 2033 EKISALERTVKALEFVQTESQKDLEITKE 2061
>gi|110349797 homer 2 isoform 4 [Homo sapiens]
Length = 299
Score = 35.4 bits (80), Expect = 0.010
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 20 VKEKVMYEKEAKQQ-EEKIEKMRAE----DGENYDIKKQAEILQESRMMIPDCQRRLEAA 74
VK ++ EKE Q + +IE++ AE + E D++KQ+EI+ + +LEAA
Sbjct: 180 VKNEINREKEKNTQLKRRIEELEAELREKETELKDLRKQSEIIPQLMSECEYVSEKLEAA 239
Query: 75 YLDLQRILENEKDLE---EAEEYKEARLVLD 102
D Q + + + L+ E +Y++ L ++
Sbjct: 240 ERDNQNLEDKVRSLKTDIEESKYRQRHLKVE 270
>gi|110349794 homer 2 isoform 3 [Homo sapiens]
Length = 288
Score = 35.4 bits (80), Expect = 0.010
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 20 VKEKVMYEKEAKQQ-EEKIEKMRAE----DGENYDIKKQAEILQESRMMIPDCQRRLEAA 74
VK ++ EKE Q + +IE++ AE + E D++KQ+EI+ + +LEAA
Sbjct: 169 VKNEINREKEKNTQLKRRIEELEAELREKETELKDLRKQSEIIPQLMSECEYVSEKLEAA 228
Query: 75 YLDLQRILENEKDLE---EAEEYKEARLVLD 102
D Q + + + L+ E +Y++ L ++
Sbjct: 229 ERDNQNLEDKVRSLKTDIEESKYRQRHLKVE 259
>gi|120431745 huntingtin-associated protein 1 isoform 4 [Homo
sapiens]
Length = 594
Score = 34.7 bits (78), Expect = 0.017
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 17 KRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEIL----QESRMMIPDCQRRLE 72
K + +E ++++ Q E EK+R + EN+ ++++A L E +M+I +C +
Sbjct: 298 KLISQEALLHQHHCPQLEALQEKLRLLEEENHQLREEASQLDTLEDEEQMLILECVEQFS 357
Query: 73 AA---YLDLQRILENEKDLEEAEEYKEARLVLDSVKLE 107
A +L +L + E ++ + ARL +KL+
Sbjct: 358 EASQQMAELSEVLVLRLENYERQQQEVARLQAQVLKLQ 395
>gi|120431743 huntingtin-associated protein 1 isoform 3 [Homo
sapiens]
Length = 602
Score = 34.7 bits (78), Expect = 0.017
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 17 KRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEIL----QESRMMIPDCQRRLE 72
K + +E ++++ Q E EK+R + EN+ ++++A L E +M+I +C +
Sbjct: 306 KLISQEALLHQHHCPQLEALQEKLRLLEEENHQLREEASQLDTLEDEEQMLILECVEQFS 365
Query: 73 AA---YLDLQRILENEKDLEEAEEYKEARLVLDSVKLE 107
A +L +L + E ++ + ARL +KL+
Sbjct: 366 EASQQMAELSEVLVLRLENYERQQQEVARLQAQVLKLQ 403
>gi|120431738 huntingtin-associated protein 1 isoform 2 [Homo
sapiens]
Length = 619
Score = 34.7 bits (78), Expect = 0.017
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 17 KRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEIL----QESRMMIPDCQRRLE 72
K + +E ++++ Q E EK+R + EN+ ++++A L E +M+I +C +
Sbjct: 298 KLISQEALLHQHHCPQLEALQEKLRLLEEENHQLREEASQLDTLEDEEQMLILECVEQFS 357
Query: 73 AA---YLDLQRILENEKDLEEAEEYKEARLVLDSVKLE 107
A +L +L + E ++ + ARL +KL+
Sbjct: 358 EASQQMAELSEVLVLRLENYERQQQEVARLQAQVLKLQ 395
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 33.9 bits (76), Expect = 0.029
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 21 KEKVMYEKEAKQQEEKIEKMRAED----GENYDIKKQAEILQESRMMIPDCQRRLEAAYL 76
+E M E+EAK QE++ EKMR ++ + I++Q E ++E M+ Q + E +
Sbjct: 472 QEGKMCEQEAKMQEQE-EKMRRQEEKIREQEKKIREQEEKIREQEEMM---QEQEEKMWE 527
Query: 77 DLQRILENEKDLEEAEE 93
+++ E E+ ++E EE
Sbjct: 528 QEEKMCEQEEKMQEQEE 544
Score = 33.5 bits (75), Expect = 0.038
Identities = 22/91 (24%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 7 RQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPD 66
++ KI+ K +EK+ ++E +Q+EEKI + + + +Q E ++E I +
Sbjct: 342 KEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIRE 401
Query: 67 ----CQRRLEAAYLDLQRILENEKDLEEAEE 93
Q + E +++ E E++++E EE
Sbjct: 402 QEEMMQEQEEKMGEQEEKMWEQEEEMQEQEE 432
Score = 30.0 bits (66), Expect = 0.42
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 21 KEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLEAA--YLDL 78
+E++M+EK EEKI ++ + E I++Q E QE + +R+ + A +
Sbjct: 335 QEEMMWEK-----EEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQE 389
Query: 79 QRILENEKDLEEAEE 93
++I E E+ + E EE
Sbjct: 390 EKIREQEEKIREQEE 404
Score = 29.3 bits (64), Expect = 0.71
Identities = 20/77 (25%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 21 KEKVMYEKEAKQQEEKIEKMRAED----GENYDIKKQAEILQESRMMIPDCQRRLEAAYL 76
+E+ M+E+E + QE++ EKMR ++ + I++Q E ++E M+ + + ++
Sbjct: 416 QEEKMWEQEEEMQEQE-EKMRRQEEKIREQEKKIREQEEKIREQEEMMQEQEEKMGE--- 471
Query: 77 DLQRILENEKDLEEAEE 93
++ E E ++E EE
Sbjct: 472 QEGKMCEQEAKMQEQEE 488
Score = 29.3 bits (64), Expect = 0.71
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 21 KEKVMYEKEAK--QQEEKIEKMRAEDGENYD-IKKQAEILQESRMMIPD----------- 66
+E+ M E+E K +QEEKI + + E + I++Q E++QE + +
Sbjct: 423 QEEEMQEQEEKMRRQEEKIREQEKKIREQEEKIREQEEMMQEQEEKMGEQEGKMCEQEAK 482
Query: 67 CQRRLEAAYLDLQRILENEKDLEEAEE 93
Q + E ++I E EK + E EE
Sbjct: 483 MQEQEEKMRRQEEKIREQEKKIREQEE 509
>gi|24308223 hypothetical protein LOC57577 [Homo sapiens]
Length = 936
Score = 33.9 bits (76), Expect = 0.029
Identities = 22/92 (23%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 16 VKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLEAAY 75
++R +++ EK+ KQ+EEK+ +++A++ E K++AE + + +R +
Sbjct: 666 IQRAECRRILAEKKKKQEEEKLAQLKAQEEERQ--KREAEEKEAQLERKREEKRLKKMKE 723
Query: 76 LDLQRILENEKDLEEAEEYKEARLVLDSVKLE 107
L+ Q+ ++ + LE + R++L LE
Sbjct: 724 LEKQKRIKRNQQLEAIAKEHYERVLLRKKGLE 755
>gi|24234699 keratin 19 [Homo sapiens]
Length = 400
Score = 33.5 bits (75), Expect = 0.038
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 13 TGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGE--NYDIKKQAEILQESRMMIPDCQRR 70
T + K L + YE A+Q + E E N ++ E LQ SR + D +R
Sbjct: 243 TDLAKILSDMRSQYEVMAEQNRKDAEAWFTSRTEELNREVAGHTEQLQMSRSEVTDLRRT 302
Query: 71 LEAAYLDLQRILENEKDLEEAEEYKEARLVLDSVKLEA 108
L+ ++LQ L + LE+ EAR ++A
Sbjct: 303 LQGLEIELQSQLSMKAALEDTLAETEARFGAQLAHIQA 340
>gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens]
Length = 495
Score = 33.5 bits (75), Expect = 0.038
Identities = 24/104 (23%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 8 QIKIKTGVVKRLVKEKVM--------YEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQE 59
Q K K ++L+KEK+M YE++ ++++K+EKM A + +K+ + ++
Sbjct: 198 QEKKKQEAYEQLLKEKLMIDEIVRKIYEEDQLEKQQKLEKMNAMRRYIEEFQKEQALWRK 257
Query: 60 SRMMIPDCQRRLEAAYLDLQRILENEKDLEEAEEYKEARLVLDS 103
+ + + R + ++Q+ E ++ + + +E +E RL L +
Sbjct: 258 KKREEMEEENRKIIEFANMQQQREEDR-MAKVQENEEKRLQLQN 300
Score = 26.2 bits (56), Expect = 6.0
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 5 RVRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAE-------DGENYDIKKQA--E 55
+ Q+K + K +++E KE E+K K +A+ E + KKQ E
Sbjct: 148 KYEQMKRDAEIAKTMMEEHKRIIKEENAAEDKRNKAKAQYYLDLEKQLEEQEKKKQEAYE 207
Query: 56 ILQESRMMIPDCQRRL-EAAYLDLQRILENEKDLEE-AEEYKEARLVLDSVKLE 107
L + ++MI + R++ E L+ Q+ LE + EE+++ + + K E
Sbjct: 208 QLLKEKLMIDEIVRKIYEEDQLEKQQKLEKMNAMRRYIEEFQKEQALWRKKKRE 261
>gi|238908495 similar to pleckstrin homology domain protein (5V327)
[Homo sapiens]
Length = 506
Score = 33.1 bits (74), Expect = 0.049
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 6 VRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQA--EILQESRMM 63
+RQI+ K +++L++EK++ EK K+ EE+ + E+ E Y + QA LQE
Sbjct: 288 LRQIEEK---MQQLLEEKLLAEKRMKENEERSRALE-EEREFYSSQSQALQNSLQELTAE 343
Query: 64 IPDCQRRLEAAYLDLQRILENEKDLEEAE 92
+R L+A +++ ++ E+ L EAE
Sbjct: 344 KQQAERELKA---EVKVRMDLERRLREAE 369
Score = 28.1 bits (61), Expect = 1.6
Identities = 15/72 (20%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 22 EKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLEAAYLDLQRI 81
E++ ++E +++ E++ ++ + + ++ E++QE RM +R LE L+ +
Sbjct: 175 EELCLQREQREELERLNQVLEAEKQQFE-----EVVQELRMEQEQIKRELELTARCLKGV 229
Query: 82 LENEKDLEEAEE 93
+ +K+L E
Sbjct: 230 EQEKKELRHLTE 241
>gi|14589862 aspartate beta-hydroxylase isoform d [Homo sapiens]
Length = 210
Score = 33.1 bits (74), Expect = 0.049
Identities = 19/83 (22%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 16 VKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQE--SRMMIPDCQRRLEA 73
VK L KE++ EKE + ++ + + G+ D++K +I SR P ++ E
Sbjct: 93 VKELTKEELKKEKEKPESRKESKNEERKKGKKEDVRKDKKIADADLSRKESPKGKKDREK 152
Query: 74 AYLDLQRILENEKDLEEAEEYKE 96
+DL++ + +++ +++ K+
Sbjct: 153 EKVDLEKSAKTKENRKKSTNMKD 175
Score = 31.6 bits (70), Expect = 0.14
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 13 TGVVKRLVKEKV--MYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRR 70
+GV KR K KV + ++E K+++EK E + E K+ ++ ++ ++ D R+
Sbjct: 82 SGVAKRKTKAKVKELTKEELKKEKEKPESRKESKNEERKKGKKEDVRKDKKIADADLSRK 141
Query: 71 LEAAYLDLQRILENEK-DLEEAEEYKEAR 98
++ E EK DLE++ + KE R
Sbjct: 142 ESPKG---KKDREKEKVDLEKSAKTKENR 167
>gi|9910364 aspartate beta-hydroxylase isoform e [Homo sapiens]
Length = 225
Score = 33.1 bits (74), Expect = 0.049
Identities = 19/83 (22%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 16 VKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQE--SRMMIPDCQRRLEA 73
VK L KE++ EKE + ++ + + G+ D++K +I SR P ++ E
Sbjct: 108 VKELTKEELKKEKEKPESRKESKNEERKKGKKEDVRKDKKIADADLSRKESPKGKKDREK 167
Query: 74 AYLDLQRILENEKDLEEAEEYKE 96
+DL++ + +++ +++ K+
Sbjct: 168 EKVDLEKSAKTKENRKKSTNMKD 190
Score = 31.6 bits (70), Expect = 0.14
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 13 TGVVKRLVKEKV--MYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRR 70
+GV KR K KV + ++E K+++EK E + E K+ ++ ++ ++ D R+
Sbjct: 97 SGVAKRKTKAKVKELTKEELKKEKEKPESRKESKNEERKKGKKEDVRKDKKIADADLSRK 156
Query: 71 LEAAYLDLQRILENEK-DLEEAEEYKEAR 98
++ E EK DLE++ + KE R
Sbjct: 157 ESPKG---KKDREKEKVDLEKSAKTKENR 182
>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 899
Score = 33.1 bits (74), Expect = 0.049
Identities = 18/90 (20%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 8 QIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDC 67
+++ + G ++ ++ EK ++QE+++ + E E ++++Q E +QE + +
Sbjct: 301 RLREQEGKMREQEEKMWRQEKRLREQEKELREQEKELREQKELREQEEQMQEQEEKMWEQ 360
Query: 68 QRRL----EAAYLDLQRILENEKDLEEAEE 93
+ ++ E + +R+ E EK + E E+
Sbjct: 361 EEKMREQEEKMWRQEERLWEQEKQMREQEQ 390
Score = 30.4 bits (67), Expect = 0.32
Identities = 24/97 (24%), Positives = 55/97 (56%), Gaps = 7/97 (7%)
Query: 3 DPRVRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRM 62
+ + ++ + KT +++ +E+ M E+E K +EE+ E MR ++ + +++Q E +QE
Sbjct: 693 EKKTQEQEKKTWDQEKMREEESMREREKKMREEE-EMMREQEEK---MQEQEEKMQEQEE 748
Query: 63 MIPDCQRRL---EAAYLDLQRILENEKDLEEAEEYKE 96
+ + + ++ E + QR+ E ++ L E E+ +E
Sbjct: 749 EMWEQEEKMWEQEEKMWEQQRLPEQKEKLWEHEKMQE 785
Score = 28.9 bits (63), Expect = 0.93
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 3 DPRVRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRM 62
+ R+R+ + V+++ +EK M E+E K ++++ EKM+ E+ KK E + R
Sbjct: 410 EERMREQEKMWEQVEKMREEKKMQEQEKKTRDQE-EKMQEEERIREREKKMREEEETMRE 468
Query: 63 MIPDCQRRLEAAY------LDLQRILENEKDLEEAEEYKE 96
Q++ E + QR+ E ++ L E E+ +E
Sbjct: 469 QEEKMQKQEENMWEQEEKEWQQQRLPEQKEKLWEQEKMQE 508
Score = 28.9 bits (63), Expect = 0.93
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 27 EKEAKQQEEKI----EKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLEAAYLDLQRIL 82
EK+ ++QE+K EKMR E+ KK E + R Q + E +++
Sbjct: 568 EKKTQEQEKKTWDQEEKMREEERMREREKKMREEEEMMREQEEKMQEQEEKMQEQEEKMW 627
Query: 83 ENEKDLEEAEE 93
E E+ ++E EE
Sbjct: 628 EQEEKMQEQEE 638
Score = 28.1 bits (61), Expect = 1.6
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 15/74 (20%)
Query: 20 VKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLEAAYLDLQ 79
++EK +E ++ E++EKMR E KK + QE +M + +
Sbjct: 406 LREKEERMREQEKMWEQVEKMREEKKMQEQEKKTRD--QEEKMQ-------------EEE 450
Query: 80 RILENEKDLEEAEE 93
RI E EK + E EE
Sbjct: 451 RIREREKKMREEEE 464
Score = 27.3 bits (59), Expect = 2.7
Identities = 23/92 (25%), Positives = 52/92 (56%), Gaps = 9/92 (9%)
Query: 17 KRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLEAAYL 76
+++ +E+ M E+E K +EE+ E MR ++ + +++Q E +QE + + + +++
Sbjct: 583 EKMREEERMREREKKMREEE-EMMREQEEK---MQEQEEKMQEQEEKMWEQEEKMQE--- 635
Query: 77 DLQRILENEKDLEEAEE--YKEARLVLDSVKL 106
+++ E E+ + E EE +++ RL KL
Sbjct: 636 QEEKMWEQEEKMWEQEEKMWEQQRLPEQKEKL 667
Score = 26.9 bits (58), Expect = 3.5
Identities = 19/80 (23%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 21 KEKVMYEKEAKQQEEKI---EKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLEAAYLD 77
+EK+ ++E QE+K+ EKMR ++ + ++ Q E +++ + D + R+E +
Sbjct: 517 EEKIRDQEEMWGQEKKMWRQEKMREQEDQMWE---QEEKMRDQEQKMWDQEERMEKKTQE 573
Query: 78 LQ-RILENEKDLEEAEEYKE 96
+ + + E+ + E E +E
Sbjct: 574 QEKKTWDQEEKMREEERMRE 593
Score = 26.2 bits (56), Expect = 6.0
Identities = 25/103 (24%), Positives = 53/103 (51%), Gaps = 15/103 (14%)
Query: 5 RVRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMI 64
R ++ K++ K +E+ M+E+E K QE++ EKM ++ + ++ QE +M
Sbjct: 606 REQEEKMQEQEEKMQEQEEKMWEQEEKMQEQE-EKMWEQEEKMWE--------QEEKMWE 656
Query: 65 PDCQRRLEAAYLDLQRILENEKDLEEAEEYKEARLVLDSVKLE 107
Q+RL +++ E+EK E+ + ++ + + K+E
Sbjct: 657 ---QQRLPE---QKEKLWEHEKMQEQEKMQEQEEKIWEQEKME 693
>gi|47717125 intersectin 1 isoform ITSN-s [Homo sapiens]
Length = 1220
Score = 33.1 bits (74), Expect = 0.049
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 13 TGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLE 72
T V +RL +E V+ +++ QQ EK + ED + + ++ L++ R + + QR+ +
Sbjct: 323 TSVDQRLPEEPVLEDEQ--QQLEKKLPVTFEDKKRENFERGNLELEKRRQALLEQQRKEQ 380
Query: 73 AAYLDLQRILENEKDLEEAEEYKEARLVLD 102
L+R + K+ E E+ ++ +L L+
Sbjct: 381 ERLAQLERAEQERKERERQEQERKRQLELE 410
>gi|47717123 intersectin 1 isoform ITSN-l [Homo sapiens]
Length = 1721
Score = 33.1 bits (74), Expect = 0.049
Identities = 23/90 (25%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 13 TGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLE 72
T V +RL +E V+ +++ QQ EK + ED + + ++ L++ R + + QR+ +
Sbjct: 323 TSVDQRLPEEPVLEDEQ--QQLEKKLPVTFEDKKRENFERGNLELEKRRQALLEQQRKEQ 380
Query: 73 AAYLDLQRILENEKDLEEAEEYKEARLVLD 102
L+R + K+ E E+ ++ +L L+
Sbjct: 381 ERLAQLERAEQERKERERQEQERKRQLELE 410
>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
sapiens]
Length = 1843
Score = 33.1 bits (74), Expect = 0.049
Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 16/120 (13%)
Query: 2 ADPRVRQIKIKTGVVKRLVKE------KVMYEK-----EAKQQEEKIEKMRAEDGENYDI 50
A+ RV+ I+ + ++ +KE K+ +EK E + +EK E+ + E + +
Sbjct: 578 AEARVKDIEKENKILHESIKETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHL 637
Query: 51 KKQAEILQESRMMIP-DCQR--RLEAAYLDLQRILENEKDLEEAEEYKEARLVLDSVKLE 107
+K+ E+LQ+ + C++ LE +L+R EN K + + +K L+S++ E
Sbjct: 638 EKENELLQKKITNLKITCEKIEALEQENSELER--ENRKLKKTLDSFKNLTFQLESLEKE 695
Score = 28.5 bits (62), Expect = 1.2
Identities = 22/92 (23%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 6 VRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEI----LQESR 61
+ ++KI + +++L KE E+E Q E+ +++ + EN +++QAEI L+E+
Sbjct: 800 LEELKISSKRLEQLEKENKSLEQETSQLEKDKKQL---EKENKRLRQQAEIKDTTLEENN 856
Query: 62 MMIPDCQRRLEAAYLDLQRILENEKDLEEAEE 93
+ I + ++ + ++ E+ L+E E+
Sbjct: 857 VKIGNLEKENKTLSKEIGIYKESCVRLKELEK 888
Score = 28.1 bits (61), Expect = 1.6
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 50 IKKQAEILQESRMMIPDCQRRLEAAYLDLQRI-LENEKDLEEAEEYKEARLVLDSVKLEA 108
I++ + L+E + DC++ LE ++L+R+ EN L +A + R LD+++ +A
Sbjct: 260 IRRLRQELEEKTEQLLDCKQELEQMEIELKRLQQENMNLLSDARSARMYRDELDALREKA 319
Score = 26.2 bits (56), Expect = 6.0
Identities = 17/97 (17%), Positives = 45/97 (46%)
Query: 5 RVRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMI 64
++ +KI ++ L +E E+E ++ ++ ++ + + ++K+ L E + +
Sbjct: 647 KITNLKITCEKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQLDEENLEL 706
Query: 65 PDCQRRLEAAYLDLQRILENEKDLEEAEEYKEARLVL 101
L+ A + + ++ K+LE +E + L L
Sbjct: 707 RRNVESLKCASMKMAQLQLENKELESEKEQLKKGLEL 743
>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
sapiens]
Length = 1870
Score = 33.1 bits (74), Expect = 0.049
Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 16/120 (13%)
Query: 2 ADPRVRQIKIKTGVVKRLVKE------KVMYEK-----EAKQQEEKIEKMRAEDGENYDI 50
A+ RV+ I+ + ++ +KE K+ +EK E + +EK E+ + E + +
Sbjct: 578 AEARVKDIEKENKILHESIKETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHL 637
Query: 51 KKQAEILQESRMMIP-DCQR--RLEAAYLDLQRILENEKDLEEAEEYKEARLVLDSVKLE 107
+K+ E+LQ+ + C++ LE +L+R EN K + + +K L+S++ E
Sbjct: 638 EKENELLQKKITNLKITCEKIEALEQENSELER--ENRKLKKTLDSFKNLTFQLESLEKE 695
Score = 28.5 bits (62), Expect = 1.2
Identities = 22/92 (23%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 6 VRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEI----LQESR 61
+ ++KI + +++L KE E+E Q E+ +++ + EN +++QAEI L+E+
Sbjct: 800 LEELKISSKRLEQLEKENKSLEQETSQLEKDKKQL---EKENKRLRQQAEIKDTTLEENN 856
Query: 62 MMIPDCQRRLEAAYLDLQRILENEKDLEEAEE 93
+ I + ++ + ++ E+ L+E E+
Sbjct: 857 VKIGNLEKENKTLSKEIGIYKESCVRLKELEK 888
Score = 28.1 bits (61), Expect = 1.6
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 50 IKKQAEILQESRMMIPDCQRRLEAAYLDLQRI-LENEKDLEEAEEYKEARLVLDSVKLEA 108
I++ + L+E + DC++ LE ++L+R+ EN L +A + R LD+++ +A
Sbjct: 260 IRRLRQELEEKTEQLLDCKQELEQMEIELKRLQQENMNLLSDARSARMYRDELDALREKA 319
Score = 26.2 bits (56), Expect = 6.0
Identities = 17/97 (17%), Positives = 45/97 (46%)
Query: 5 RVRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMI 64
++ +KI ++ L +E E+E ++ ++ ++ + + ++K+ L E + +
Sbjct: 647 KITNLKITCEKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQLDEENLEL 706
Query: 65 PDCQRRLEAAYLDLQRILENEKDLEEAEEYKEARLVL 101
L+ A + + ++ K+LE +E + L L
Sbjct: 707 RRNVESLKCASMKMAQLQLENKELESEKEQLKKGLEL 743
>gi|41152097 DNA segment on chromosome X and Y (unique) 155
expressed sequence isoform 1 [Homo sapiens]
Length = 695
Score = 33.1 bits (74), Expect = 0.049
Identities = 24/95 (25%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 15 VVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLEAA 74
+ KR ++ + + E E +++E+K + AE+ + + +KQ E+ + R + + R
Sbjct: 268 IKKRQLERQKLQELEQQREEQKRREKEAEERQRAEERKQKELEELERERKREEKLRKREQ 327
Query: 75 YLDLQRILENEKDLE--EAEEYKEARLVLDSVKLE 107
+ + N+K LE +AEE K+ + + +KLE
Sbjct: 328 KQRDRELRRNQKKLEKLQAEEQKQLQ---EKIKLE 359
>gi|22758136 MAP7 domain containing 2 [Homo sapiens]
Length = 732
Score = 33.1 bits (74), Expect = 0.049
Identities = 18/80 (22%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Query: 15 VVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLEAA 74
++++ + ++ YEK+ +++ K+E+ R + + K+A + ++ + + + + RLEA
Sbjct: 76 ILEKQKRARLQYEKQMEERWRKLEEQRQREDQ-----KRAAVEEKRKQKLREEEERLEAM 130
Query: 75 YLDLQRILENEKDLEEAEEY 94
++R LE + LE ++Y
Sbjct: 131 ---MRRSLERTQQLELKKKY 147
Score = 32.0 bits (71), Expect = 0.11
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 18 RLVKEKVMYEKEAKQQEEKIEKMRAED----GENYDIKKQAEILQESRMMIPDCQRRLEA 73
RL +E E+E K+QEE+ +K E+ GE K + E+L + + Q + E
Sbjct: 446 RLEEEARKQEEERKRQEEEKKKQEGEEKRKAGEEAKRKAEEELLLKEKQE----QEKQEK 501
Query: 74 AYLDLQRILENEKDLEEAEEYKEAR 98
A ++ Q+ K E AE+ + R
Sbjct: 502 AMIEKQKEAAETKAREVAEQMRLER 526
Score = 26.2 bits (56), Expect = 6.0
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 17 KRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLEAAYL 76
KR +E+++ ++ KQ++EK EK E + K E+ ++ R+ ++E
Sbjct: 481 KRKAEEELLLKE--KQEQEKQEKAMIEKQKEAAETKAREVAEQMRLEREQIMLQIE---- 534
Query: 77 DLQRILENEKDLEEAEEYKEARLVLDSVKLE 107
Q LE +K ++E + V VK E
Sbjct: 535 --QERLERKKRIDEIMKRTRKSDVPPQVKKE 563
>gi|237858799 adenylate kinase domain containing 1 isoform 1 [Homo
sapiens]
Length = 1911
Score = 32.7 bits (73), Expect = 0.065
Identities = 24/91 (26%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 17 KRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLEAAYL 76
K+L ++K++ + +AK + + I K RAE D K++ ++++ + + LE
Sbjct: 1174 KKLERKKLIKDMKAKIRVDTIAKRRAELILERDKKRRENVVRDDEEI---SEEELEEDND 1230
Query: 77 DLQRILENE--KDLEEAEEYKEARLVLDSVK 105
D++ ILE+E KD EE ++ D+++
Sbjct: 1231 DIENILEDEFPKDEEEMSGEEDEEQETDAIE 1261
Score = 26.6 bits (57), Expect = 4.6
Identities = 14/48 (29%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 21 KEKVMYEKEAKQQEEKIEKMRAEDGENYDI-KKQAEILQE--SRMMIP 65
+E++ E++ +Q+ + IE++R E GE ++ +I+Q+ R +IP
Sbjct: 1244 EEEMSGEEDEEQETDAIERLRGELGEKFEADTHNLQIIQDELERYLIP 1291
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 32.7 bits (73), Expect = 0.065
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 3 DPRVRQIKIKTGVVKRL--VKEKVMYEKEAKQQEEKI----EKMRAEDGENYDIKKQAEI 56
D R+R+ + + K++ +EK+ EK+ ++QE+K EKMR E+ KK E
Sbjct: 513 DERLREKEERMREQKKMWQQEEKMREEKKTQEQEKKTWDQEEKMREEERMREREKKMREE 572
Query: 57 LQESRMMIPDCQRRLEAAYLDLQRILENEKDLEEAEE 93
+ R Q + E +++ E E+ ++E EE
Sbjct: 573 EEMMREQEEKMQEQEEKMREQEEKMWEQEEKMQEQEE 609
Score = 32.3 bits (72), Expect = 0.084
Identities = 22/92 (23%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 5 RVRQIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMI 64
R ++ K++ K +E+ M+E+E K QE++ EKM ++ + ++ +++ ++ ++ MM
Sbjct: 577 REQEEKMQEQEEKMREQEEKMWEQEEKMQEQE-EKMWEQEEKMWEQEEEDKMQEQEEMMW 635
Query: 65 PD---CQRRLEAAYLDLQRILENEKDLEEAEE 93
Q + E + +++ E E+ + E EE
Sbjct: 636 EQEEKMQEQEEKMWEQEEKMREQEEKMREQEE 667
Score = 32.0 bits (71), Expect = 0.11
Identities = 18/90 (20%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 8 QIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDC 67
+++ + G ++ ++ EK ++QE+++ + E E +++Q E +QE + +
Sbjct: 263 RLREQEGKMREQEEKMRRQEKRLREQEKELREQEKELREQKKLREQEEQMQEQEEKMWEQ 322
Query: 68 QRRL----EAAYLDLQRILENEKDLEEAEE 93
+ ++ E + +R+ E EK + E E+
Sbjct: 323 EEKMREQEEKMWRQEERLWEQEKQMREQEQ 352
Score = 26.9 bits (58), Expect = 3.5
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 18/95 (18%)
Query: 17 KRLVKEKVMYEKEAKQQE-----EKIEKMRAED----GENYDIKKQAEILQE------SR 61
+R+ +++ M+E+E K QE E+ +KMR E+ + ++KQ E + E +
Sbjct: 373 ERMREQEKMWEQEEKMQEEERIREREKKMREEEETMREQEEKMQKQEENMWEQEEKEWQQ 432
Query: 62 MMIPDCQRRL---EAAYLDLQRILENEKDLEEAEE 93
+P+ + +L E ++I E E+ + + EE
Sbjct: 433 QRLPEQKEKLWEQEKMQEQEEKIWEQEEKIRDQEE 467
Score = 26.6 bits (57), Expect = 4.6
Identities = 19/79 (24%), Positives = 43/79 (54%), Gaps = 12/79 (15%)
Query: 21 KEKVMYEKEAKQQE------EKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLEAA 74
+E++M+E+E K QE E+ EKMR ++ + +++Q E +Q + + + +++
Sbjct: 630 QEEMMWEQEEKMQEQEEKMWEQEEKMREQEEK---MREQEEKMQGQEEKMREQEEKMQG- 685
Query: 75 YLDLQRILENEKDLEEAEE 93
+++ E E+ + EE
Sbjct: 686 --QEEKMREQEEKMRGQEE 702
>gi|44890052 stathmin 1 isoform a [Homo sapiens]
Length = 149
Score = 32.3 bits (72), Expect = 0.084
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 8 QIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDC 67
Q K++ +R E + ++ A+++E + E ++ EN + K AE +M
Sbjct: 51 QKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKE 110
Query: 68 QRRLEAAYLDLQRILENEKDLEEAEEYKEARLVLDSVKLE 107
R + A L+R+ E +K +EE + KE++ D + +
Sbjct: 111 NREAQMA-AKLERLREKDKHIEEVRKNKESKDPADETEAD 149
>gi|44890050 stathmin 1 isoform a [Homo sapiens]
Length = 149
Score = 32.3 bits (72), Expect = 0.084
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Query: 8 QIKIKTGVVKRLVKEKVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDC 67
Q K++ +R E + ++ A+++E + E ++ EN + K AE +M
Sbjct: 51 QKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKE 110
Query: 68 QRRLEAAYLDLQRILENEKDLEEAEEYKEARLVLDSVKLE 107
R + A L+R+ E +K +EE + KE++ D + +
Sbjct: 111 NREAQMA-AKLERLREKDKHIEEVRKNKESKDPADETEAD 149
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.130 0.331
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,450,569
Number of Sequences: 37866
Number of extensions: 139323
Number of successful extensions: 2078
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 263
Number of HSP's that attempted gapping in prelim test: 1448
Number of HSP's gapped (non-prelim): 834
length of query: 108
length of database: 18,247,518
effective HSP length: 78
effective length of query: 30
effective length of database: 15,293,970
effective search space: 458819100
effective search space used: 458819100
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.