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Search of human proteins with 4758896
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4758896 peroxisomal biogenesis factor 14 [Homo sapiens]
(377 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4758896 peroxisomal biogenesis factor 14 [Homo sapiens] 743 0.0
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 48 1e-05
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 46 6e-05
gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens] 46 6e-05
gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens] 46 6e-05
gi|63252870 osteosarcoma amplified 9 isoform 4 precursor [Homo s... 45 1e-04
gi|63252868 osteosarcoma amplified 9 isoform 3 precursor [Homo s... 45 1e-04
gi|210032580 SET domain containing 1B [Homo sapiens] 45 1e-04
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex... 42 7e-04
gi|239757043 PREDICTED: functional smad suppressing element 18 [... 42 0.001
gi|239751555 PREDICTED: functional smad suppressing element 18 [... 41 0.002
gi|239746067 PREDICTED: functional smad suppressing element 18 [... 41 0.002
gi|55741677 SET domain containing 1A [Homo sapiens] 41 0.002
gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 41 0.002
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] 41 0.002
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens] 41 0.002
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens] 41 0.002
gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens] 41 0.002
gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens] 41 0.002
gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens] 41 0.002
gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 41 0.002
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 40 0.003
gi|82830428 gon-4-like isoform b [Homo sapiens] 40 0.003
gi|116235474 LKB1 interacting protein [Homo sapiens] 40 0.003
gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo ... 40 0.003
gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo ... 40 0.003
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 40 0.003
gi|63252866 osteosarcoma amplified 9 isoform 2 precursor [Homo s... 40 0.004
gi|5803109 osteosarcoma amplified 9 isoform 1 precursor [Homo sa... 40 0.004
gi|4504425 high-mobility group box 1 [Homo sapiens] 39 0.006
>gi|4758896 peroxisomal biogenesis factor 14 [Homo sapiens]
Length = 377
Score = 743 bits (1917), Expect = 0.0
Identities = 377/377 (100%), Positives = 377/377 (100%)
Query: 1 MASSEQAEQPSQPSSTPGSENVLPREPLIATAVKFLQNSRVRQSPLATRRAFLKKKGLTD 60
MASSEQAEQPSQPSSTPGSENVLPREPLIATAVKFLQNSRVRQSPLATRRAFLKKKGLTD
Sbjct: 1 MASSEQAEQPSQPSSTPGSENVLPREPLIATAVKFLQNSRVRQSPLATRRAFLKKKGLTD 60
Query: 61 EEIDMAFQQSGTAADEPSSLGPATQVVPVQPPHLISQPYSPAGSRWRDYGALAIIMAGIA 120
EEIDMAFQQSGTAADEPSSLGPATQVVPVQPPHLISQPYSPAGSRWRDYGALAIIMAGIA
Sbjct: 61 EEIDMAFQQSGTAADEPSSLGPATQVVPVQPPHLISQPYSPAGSRWRDYGALAIIMAGIA 120
Query: 121 FGFHQLYKKYLLPLILGGREDRKQLERMEAGLSELSGSVAQTVTQLQTTLASVQELLIQQ 180
FGFHQLYKKYLLPLILGGREDRKQLERMEAGLSELSGSVAQTVTQLQTTLASVQELLIQQ
Sbjct: 121 FGFHQLYKKYLLPLILGGREDRKQLERMEAGLSELSGSVAQTVTQLQTTLASVQELLIQQ 180
Query: 181 QQKIQELAHELAAAKATTSTNWILESQNINELKSEINSLKGLLLNRRQFPPSPSAPKIPS 240
QQKIQELAHELAAAKATTSTNWILESQNINELKSEINSLKGLLLNRRQFPPSPSAPKIPS
Sbjct: 181 QQKIQELAHELAAAKATTSTNWILESQNINELKSEINSLKGLLLNRRQFPPSPSAPKIPS 240
Query: 241 WQIPVKSPSPSSPAAVNHHSSSDISPVSNESTSSSPGKEGHSPEGSTVTYHLLGPQEEGE 300
WQIPVKSPSPSSPAAVNHHSSSDISPVSNESTSSSPGKEGHSPEGSTVTYHLLGPQEEGE
Sbjct: 241 WQIPVKSPSPSSPAAVNHHSSSDISPVSNESTSSSPGKEGHSPEGSTVTYHLLGPQEEGE 300
Query: 301 GVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVDEEDCLGVQREDRRGGDGQINEQ 360
GVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVDEEDCLGVQREDRRGGDGQINEQ
Sbjct: 301 GVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVDEEDCLGVQREDRRGGDGQINEQ 360
Query: 361 VEKLRRPEGASNESERD 377
VEKLRRPEGASNESERD
Sbjct: 361 VEKLRRPEGASNESERD 377
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 48.1 bits (113), Expect = 1e-05
Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 6/150 (4%)
Query: 230 PPSPSAPKIPSWQIPVKSPSPSSPAAVNHHSSSDISPVSNESTSSSPGKEGHSPEGSTVT 289
P +P+ P S +P K PAA P + P + PEG+
Sbjct: 810 PIAPTGPPTASPPVPAKEEPEELPAAPGPLPPPPPPPPPVPGPVTLPPPQ-LVPEGTPGG 868
Query: 290 YHLLGPQ--EEGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVDEEDCLGVQR 347
GP EE V+++ E + EEE+ E++E+EE+EED + DEE+ +
Sbjct: 869 G---GPPALEEDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEE 925
Query: 348 EDRRGGDGQINEQVEKLRRPEGASNESERD 377
E+ + + E+ +L E +E E +
Sbjct: 926 EEEEEFEEEFEEEEGELEEEEEEEDEEEEE 955
Score = 37.0 bits (84), Expect = 0.029
Identities = 36/149 (24%), Positives = 58/149 (38%), Gaps = 28/149 (18%)
Query: 230 PPSPSAPKIPSWQIPVKSPSPSSPAAVNHHSSSDISPVSNESTSSSPGKEGHSPEGSTVT 289
PP P P +P PV P P + E T G + + +
Sbjct: 841 PPPPPPPPVPG---PVTLPPPQ---------------LVPEGTPGGGGPPALEEDLTVIN 882
Query: 290 YHLLGPQEEGEGVVDVKGQVRMEVQGEEEKREDKED-EEDEEDDDVSHVDEEDCLGVQRE 348
+ +EE E E + EEE+ E++ED EE+EED++ +EE+ E
Sbjct: 883 INSSDEEEEEE---------EEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEE 933
Query: 349 DRRGGDGQINEQVEKLRRPEGASNESERD 377
+ +G++ E+ E+ E E D
Sbjct: 934 EFEEEEGELEEEEEEEDEEEEEELEEVED 962
Score = 34.3 bits (77), Expect = 0.19
Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 20/136 (14%)
Query: 230 PPSPSAPKIPSWQ-IPVKSPSPSSPAAVNHHSSSDISPVSNESTSSSPGKEGHSPEGSTV 288
PP P +P Q +P +P P A+ D++ ++ S+ +E
Sbjct: 847 PPVPGPVTLPPPQLVPEGTPGGGGPPALEE----DLTVININSSDEEEEEE--------- 893
Query: 289 TYHLLGPQEEGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVDEEDCLGVQRE 348
+EE E + + + E + E+E+ +E+EE+EE+ + +EE L + E
Sbjct: 894 ------EEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEE 947
Query: 349 DRRGGDGQINEQVEKL 364
+ + + E+VE L
Sbjct: 948 EEDEEEEEELEEVEDL 963
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 45.8 bits (107), Expect = 6e-05
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 260 SSSDISPVSNESTSSSPGKEGHSPEGSTVTYHLLGPQEEGEG-VVDVKGQVRMEVQGEEE 318
+S + P+++ T SS GK+ + EG QE G+G K + E EEE
Sbjct: 416 TSVPLGPLASSPTKSSEGKDSGAAEGEK--------QEVGDGDCFSEKVEPAEEEAEEEE 467
Query: 319 KREDKEDEEDEEDDDVSHVDEEDCLGV 345
+ E+ E+EE+EE+++ ++E C G+
Sbjct: 468 EEEEAEEEEEEEEEEEEEEEDEGCKGL 494
>gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens]
Length = 1812
Score = 45.8 bits (107), Expect = 6e-05
Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 29/157 (18%)
Query: 231 PSPSAPKIPSWQIPVKSPSPSSPAAVNHHSSSDISPVSNESTSSSPGKEGH----SPEGS 286
P P P+ P P P + PVS + +P +E + SP+ +
Sbjct: 177 PQPRGPRTP----------PGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRN 226
Query: 287 TVTYHLLGPQEEGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDD------VSHVDEE 340
+V PQE G +G+V E Q E E+ ED D E+EED+D V + EE
Sbjct: 227 SV------PQE---GQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEE 277
Query: 341 DCLGVQREDRRGGDGQINEQVEKLRRPEGASNESERD 377
+ + E +G+ ++ E++ E + ER+
Sbjct: 278 EEEDEEEEGEEDEEGEGDDGYEQISSDEDGIADLERE 314
>gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens]
Length = 1147
Score = 45.8 bits (107), Expect = 6e-05
Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 29/157 (18%)
Query: 231 PSPSAPKIPSWQIPVKSPSPSSPAAVNHHSSSDISPVSNESTSSSPGKEGH----SPEGS 286
P P P+ P P P + PVS + +P +E + SP+ +
Sbjct: 177 PQPRGPRTP----------PGPPPPDDDEDDPVPLPVSGDKEEDAPHREDYFEPISPDRN 226
Query: 287 TVTYHLLGPQEEGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDD------VSHVDEE 340
+V PQE G +G+V E Q E E+ ED D E+EED+D V + EE
Sbjct: 227 SV------PQE---GQYSDEGEVEEEQQEEGEEDEDDVDVEEEEDEDEDDRRTVDSIPEE 277
Query: 341 DCLGVQREDRRGGDGQINEQVEKLRRPEGASNESERD 377
+ + E +G+ ++ E++ E + ER+
Sbjct: 278 EEEDEEEEGEEDEEGEGDDGYEQISSDEDGIADLERE 314
>gi|63252870 osteosarcoma amplified 9 isoform 4 precursor [Homo
sapiens]
Length = 652
Score = 45.1 bits (105), Expect = 1e-04
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 293 LGPQEEGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVDEEDCLGVQREDRRG 352
+G ++ + +V + + +G+ E++ + E+EEDE++D+ DE LG ++ G
Sbjct: 383 IGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEG 442
Query: 353 -----GDGQINEQVEKLRRPEGASNESERD 377
++ + EK P+G ESERD
Sbjct: 443 ILLPSDRDRLRSETEKELDPDGLKKESERD 472
>gi|63252868 osteosarcoma amplified 9 isoform 3 precursor [Homo
sapiens]
Length = 597
Score = 45.1 bits (105), Expect = 1e-04
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 293 LGPQEEGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVDEEDCLGVQREDRRG 352
+G ++ + +V + + +G+ E++ + E+EEDE++D+ DE LG ++ G
Sbjct: 383 IGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEG 442
Query: 353 -----GDGQINEQVEKLRRPEGASNESERD 377
++ + EK P+G ESERD
Sbjct: 443 ILLPSDRDRLRSETEKELDPDGLKKESERD 472
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 45.1 bits (105), Expect = 1e-04
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 294 GPQEEGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVDEEDCLGVQREDRRGG 353
G ++E E + + + E + EEE+ E+ +D++D +D D S D+ED + ++ G
Sbjct: 1033 GEEDEKESLSEEQESTEEEEEAEEEEEEEDDDDDDSDDRDESENDDEDTALSEASEKDEG 1092
Query: 354 DGQINEQVEKLRRPEGASNESE 375
D E V + A++ SE
Sbjct: 1093 DSDEEETVSIVTSKAEATSSSE 1114
Score = 39.7 bits (91), Expect = 0.004
Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 20/152 (13%)
Query: 235 APKIPSWQIPVKSPSPSSPAAVNHHSSSDISPVSNESTSSSPGKEG-----------HSP 283
A ++PS+++ K P P + ++ + + V E S ++ P
Sbjct: 956 AIRLPSFKVKRKEP-PDTTSSGDQKRLRPSTSVDEEDEESERERDRDMADTPCELAKRDP 1014
Query: 284 EGSTVTYHLLGPQEEGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVDEEDCL 343
+G V P E G + + + E Q E+ E+ E+EE+EEDDD D+ D
Sbjct: 1015 KGVGVRRRPARPLELDSGGEEDEKESLSEEQESTEEEEEAEEEEEEEDDDDDDSDDRD-- 1072
Query: 344 GVQREDRRGGDGQINEQVEKLRRPEGASNESE 375
+ D ++E EK EG S+E E
Sbjct: 1073 ---ESENDDEDTALSEASEK---DEGDSDEEE 1098
>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
exchanger), member 1 [Homo sapiens]
Length = 1099
Score = 42.4 bits (98), Expect = 7e-04
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 30/159 (18%)
Query: 231 PSPSAPKIPSWQIPVKSPSPS-SPAAV---------NHHSSSDISPVSNESTSSSPGKEG 280
P A P + P K P+ + +PA V N D++ EST PG+EG
Sbjct: 704 PQAKAESKPEEEEPAKLPAVTVTPAPVPDIKGDQKENPGGQEDVAEA--ESTGEMPGEEG 761
Query: 281 HSP-EGSTVTYHLLGPQEEGEGVVDVKGQVRMEVQGEEEKREDKEDEE---DEEDDDVSH 336
+ EG T +E+ G +G+ E QG+ E+ ED+ + E D E +D
Sbjct: 762 ETAGEGET--------EEKSGGETQPEGEGETETQGKGEECEDENEAEGKGDNEGEDEGE 813
Query: 337 VDEEDCLGVQREDRRGGDGQINEQVEKLRRPEGASNESE 375
+ ED + +G +G+ Q A N+ +
Sbjct: 814 IHAED------GEMKGNEGETESQELSAENHGEAKNDEK 846
Score = 34.7 bits (78), Expect = 0.14
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 277 GKEGHSPEGSTVTYHLLGPQEEGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSH 336
G EG + + + + +GV D G + + EEE+ E++E+EE+EE+ +
Sbjct: 823 GNEGETESQELSAENHGEAKNDEKGVEDGGGSDGGDSEEEEEEEEEQEEEEEEEEQEEEE 882
Query: 337 VDEEDCLGVQREDRRGGDGQINEQVEKLRRPE 368
+EE+ E+ +G NE+ L PE
Sbjct: 883 EEEEE------EEEKG-----NEEPLSLDWPE 903
Score = 30.0 bits (66), Expect = 3.6
Identities = 13/48 (27%), Positives = 28/48 (58%)
Query: 304 DVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVDEEDCLGVQREDRR 351
D + + E + EEE+ E++++EE+EE+++ E+ L + + R
Sbjct: 858 DSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSLDWPETR 905
>gi|239757043 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 996
Score = 42.0 bits (97), Expect = 0.001
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 14/113 (12%)
Query: 230 PPSPSAPKIPSWQIPVKSPSPSSPAAVNHHSSSDISPVSNEST--SSSPGKEGH-SPEGS 286
PP P +P + + P P P + HH + P + P G SP G+
Sbjct: 669 PPQPPSPLL------LLPPQPDEPGSERHHPAPPPPPPPPPPPPLAQHPHHRGLLSPGGT 722
Query: 287 TVTYHLLGPQE-----EGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDV 334
+ +Y E E E VDV+G E + EEE R+ +DEE++E+ +V
Sbjct: 723 SCSYPSEDSSEDEDDEEEEQEVDVEGHKPPEGEEEEEGRDPDDDEEEDEETEV 775
>gi|239751555 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 41.2 bits (95), Expect = 0.002
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 14/113 (12%)
Query: 230 PPSPSAPKIPSWQIPVKSPSPSSPAAVNHHSSSDISPVSNEST--SSSPGKEGH-SPEGS 286
PP P +P + + P P P + HH + P + P G SP G+
Sbjct: 669 PPQPPSPLL------LLPPQPDEPGSERHHPAPPPPPPPPPPPPLAQHPHHRGLLSPGGT 722
Query: 287 TVTYHLLGPQE-----EGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDV 334
+ Y E E E VDV+G E + EEE R+ +DEE++E+ +V
Sbjct: 723 SCCYPSEDSSEDEDDEEEEQEVDVEGHKPPEGEEEEEGRDPDDDEEEDEETEV 775
>gi|239746067 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 41.2 bits (95), Expect = 0.002
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 14/113 (12%)
Query: 230 PPSPSAPKIPSWQIPVKSPSPSSPAAVNHHSSSDISPVSNEST--SSSPGKEGH-SPEGS 286
PP P +P + + P P P + HH + P + P G SP G+
Sbjct: 669 PPQPPSPLL------LLPPQPDEPGSERHHPAPPPPPPPPPPPPLAQHPHHRGLLSPGGT 722
Query: 287 TVTYHLLGPQE-----EGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDV 334
+ Y E E E VDV+G E + EEE R+ +DEE++E+ +V
Sbjct: 723 SCCYPSEDSSEDEDDEEEEQEVDVEGHKPPEGEEEEEGRDPDDDEEEDEETEV 775
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 41.2 bits (95), Expect = 0.002
Identities = 31/150 (20%), Positives = 62/150 (41%), Gaps = 15/150 (10%)
Query: 235 APKIPSWQIPVKSPSPSSPAAVNHH------SSSDISPVSNESTSSSPGKEGHSPEGSTV 288
A ++PS+++ K PS S A+ + D E + PG+ G P
Sbjct: 887 ALRLPSFKVKRKEPSEISEASEEKRPRPSTPAEEDEDDPEQEKEAGEPGRPGTKPPKRD- 945
Query: 289 TYHLLGPQEEGEGVVDVKGQVRMEVQGEEEKREDK-EDEEDEEDDDVSHVDEEDCLGVQR 347
+E G+ + ++ +GEE +E E +E+++++D D E+ + +
Sbjct: 946 -------EERGKTQGKHRKSFALDSEGEEASQESSSEKDEEDDEEDEEDEDREEAVDTTK 998
Query: 348 EDRRGGDGQINEQVEKLRRPEGASNESERD 377
++ DG+ E + A ++ E D
Sbjct: 999 KETEVSDGEDEESDSSSKCSLYADSDGEND 1028
Score = 30.4 bits (67), Expect = 2.7
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 314 QGEEEKREDKEDEEDEEDDDVSHVDEEDCL 343
+GEEE E+ E+EE+E D S D E L
Sbjct: 1360 EGEEEGEEEGEEEEEESSDSSSSSDGEGAL 1389
>gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member A [Homo sapiens]
Length = 249
Score = 40.8 bits (94), Expect = 0.002
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 295 PQEEGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHV-DEEDCLGVQREDRRG- 352
P + EG V+ E + EEE ED + EDEED+D +EED G + ED G
Sbjct: 156 PDSDAEGYVEGLDDEE-EDEDEEEYDEDAQVVEDEEDEDEEEEGEEEDVSGEEEEDEEGY 214
Query: 353 GDGQINEQVEK 363
DG+++++ ++
Sbjct: 215 NDGEVDDEEDE 225
Score = 30.8 bits (68), Expect = 2.1
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 296 QEEGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVDEEDCLGVQREDRRGGDG 355
++E E D QV E+E+ ED+E+E +EED ++E+ D +
Sbjct: 172 EDEDEEEYDEDAQVV-----EDEEDEDEEEEGEEEDVSGEEEEDEEGYNDGEVDDEEDEE 226
Query: 356 QINEQVEKLRRPEGASNESERD 377
++ E+ +R +E E D
Sbjct: 227 ELGEEERGQKRKREPEDEGEDD 248
>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
Length = 983
Score = 40.8 bits (94), Expect = 0.002
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 139 REDRKQLERMEAGLSELSGSVAQTVTQ---LQTTLASVQELLIQQQQKIQELAHELAAAK 195
+E K+ E++ + + ++ V+Q + +QT L S ++ + + QK Q+ ELA K
Sbjct: 811 KESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQEVNELLQKFQQAQEELAEMK 870
Query: 196 ATTSTNWILES---QNINELKSEINSLKGLLLNRRQFPPSPSAPKIPSWQI 243
++ LE + INE+ E+ LK L + Q S S+ K S Q+
Sbjct: 871 RYAESSSKLEEDKDKKINEMSKEVTKLKEALNSLSQLSYSTSSSKRQSQQL 921
>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
Length = 972
Score = 40.8 bits (94), Expect = 0.002
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 139 REDRKQLERMEAGLSELSGSVAQTVTQ---LQTTLASVQELLIQQQQKIQELAHELAAAK 195
+E K+ E++ + + ++ V+Q + +QT L S ++ + + QK Q+ ELA K
Sbjct: 800 KESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQEVNELLQKFQQAQEELAEMK 859
Query: 196 ATTSTNWILES---QNINELKSEINSLKGLLLNRRQFPPSPSAPKIPSWQI 243
++ LE + INE+ E+ LK L + Q S S+ K S Q+
Sbjct: 860 RYAESSSKLEEDKDKKINEMSKEVTKLKEALNSLSQLSYSTSSSKRQSQQL 910
>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
Length = 951
Score = 40.8 bits (94), Expect = 0.002
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 139 REDRKQLERMEAGLSELSGSVAQTVTQ---LQTTLASVQELLIQQQQKIQELAHELAAAK 195
+E K+ E++ + + ++ V+Q + +QT L S ++ + + QK Q+ ELA K
Sbjct: 779 KESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQEVNELLQKFQQAQEELAEMK 838
Query: 196 ATTSTNWILES---QNINELKSEINSLKGLLLNRRQFPPSPSAPKIPSWQI 243
++ LE + INE+ E+ LK L + Q S S+ K S Q+
Sbjct: 839 RYAESSSKLEEDKDKKINEMSKEVTKLKEALNSLSQLSYSTSSSKRQSQQL 889
>gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 40.8 bits (94), Expect = 0.002
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 139 REDRKQLERMEAGLSELSGSVAQTVTQ---LQTTLASVQELLIQQQQKIQELAHELAAAK 195
+E K+ E++ + + ++ V+Q + +QT L S ++ + + QK Q+ ELA K
Sbjct: 808 KESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQEVNELLQKFQQAQEELAEMK 867
Query: 196 ATTSTNWILES---QNINELKSEINSLKGLLLNRRQFPPSPSAPKIPSWQI 243
++ LE + INE+ E+ LK L + Q S S+ K S Q+
Sbjct: 868 RYAESSSKLEEDKDKKINEMSKEVTKLKEALNSLSQLSYSTSSSKRQSQQL 918
>gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 40.8 bits (94), Expect = 0.002
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 139 REDRKQLERMEAGLSELSGSVAQTVTQ---LQTTLASVQELLIQQQQKIQELAHELAAAK 195
+E K+ E++ + + ++ V+Q + +QT L S ++ + + QK Q+ ELA K
Sbjct: 808 KESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQEVNELLQKFQQAQEELAEMK 867
Query: 196 ATTSTNWILES---QNINELKSEINSLKGLLLNRRQFPPSPSAPKIPSWQI 243
++ LE + INE+ E+ LK L + Q S S+ K S Q+
Sbjct: 868 RYAESSSKLEEDKDKKINEMSKEVTKLKEALNSLSQLSYSTSSSKRQSQQL 918
>gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 40.8 bits (94), Expect = 0.002
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 139 REDRKQLERMEAGLSELSGSVAQTVTQ---LQTTLASVQELLIQQQQKIQELAHELAAAK 195
+E K+ E++ + + ++ V+Q + +QT L S ++ + + QK Q+ ELA K
Sbjct: 808 KESVKEKEKVHSEVVQIRSEVSQVKREKENIQTLLKSKEQEVNELLQKFQQAQEELAEMK 867
Query: 196 ATTSTNWILES---QNINELKSEINSLKGLLLNRRQFPPSPSAPKIPSWQI 243
++ LE + INE+ E+ LK L + Q S S+ K S Q+
Sbjct: 868 RYAESSSKLEEDKDKKINEMSKEVTKLKEALNSLSQLSYSTSSSKRQSQQL 918
>gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member B [Homo sapiens]
Length = 251
Score = 40.8 bits (94), Expect = 0.002
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 297 EEGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVDEEDCLGVQREDRRGGDGQ 356
EEGE D + E + +EE ED++ E DE+DD+VS +EE+ G+ ED + +
Sbjct: 172 EEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVS--EEEEEFGLDEEDEDEDEDE 229
Query: 357 INEQVEK-LRRPEGASNESERD 377
E+ K +R +E E D
Sbjct: 230 EEEEGGKGEKRKRETDDEGEDD 251
Score = 39.7 bits (91), Expect = 0.004
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 298 EGEGVVDVKGQVRMEVQGEEEKREDKE-------DEEDEEDDDVSHVDEEDCLGVQREDR 350
+ + VD + + +GE+E+ ED E DEED+ED+DV DE+D + E+
Sbjct: 157 DSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEG-DEDDDEVSEEEEE 215
Query: 351 RGGDGQINEQVEKLRRPEGASNESER 376
G D + ++ E EG E +
Sbjct: 216 FGLDEEDEDEDEDEEEEEGGKGEKRK 241
Score = 29.3 bits (64), Expect = 6.1
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 294 GPQEEGEGVVDVKGQVRMEVQGEEEKRE-DKEDEEDEEDDDVSHVDEED-CLGVQREDRR 351
G EE E D + + E E+E E D++D+E E+++ +DEED E+
Sbjct: 174 GEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEE 233
Query: 352 GGDGQ 356
GG G+
Sbjct: 234 GGKGE 238
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 40.4 bits (93), Expect = 0.003
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 298 EGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVDEEDCLGVQREDRRGGDGQI 357
EGEG + +G+V EV+GEE + E +E+E +EE +E + G E+RR +
Sbjct: 1010 EGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEG------EEREKEGEGEENRRNRE--- 1060
Query: 358 NEQVEKLRRPEGASNESER 376
E+ E+ + E E+ER
Sbjct: 1061 EEEEEEGKYQETGEEENER 1079
Score = 39.7 bits (91), Expect = 0.004
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 19/126 (15%)
Query: 270 ESTSSSPGKEGHSPEGSTVTYHLLGPQEEGEGVVDVKGQVRMEV---QGEEEKREDK-ED 325
E G++G EG G +EEGEG + +G+ E +GEEE+ E + E+
Sbjct: 934 EEEGEGEGEDGEG-EGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEE 992
Query: 326 EEDEEDDDVSHVDEEDCLGVQREDRRG--------------GDGQINEQVEKLRRPEGAS 371
EE EE+ + EE+ G E+ G G+ + E+ + R EG
Sbjct: 993 EEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEG 1052
Query: 372 NESERD 377
E+ R+
Sbjct: 1053 EENRRN 1058
Score = 38.9 bits (89), Expect = 0.008
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 18/95 (18%)
Query: 296 QEEGEGVVDVKGQVRMEVQGEEEKREDK--------EDEEDEEDDDVSHVDEEDCLGVQR 347
++EGEG + +G+ EV+GE EK E + ++E+ EE+ D +EE+ G
Sbjct: 750 EKEGEGKEEGEGE---EVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGE 806
Query: 348 EDRRGGD---GQI----NEQVEKLRRPEGASNESE 375
E GG+ G++ E+ E+ EG E E
Sbjct: 807 EKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGE 841
Score = 38.1 bits (87), Expect = 0.013
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Query: 296 QEEGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVDEEDCLGVQREDRRGGDG 355
+EEGEG + E +GEEE+ E K +EE EE + +E + G + E G+G
Sbjct: 830 EEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEE----GEG 885
Query: 356 QINEQVEKLRRPEGASNESERD 377
+ E+ E E E E +
Sbjct: 886 EGEEEGEGEGEEEEGEGEGEEE 907
Score = 38.1 bits (87), Expect = 0.013
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 279 EGHSPEGSTVTYHLLGPQEEGEGVVDVKGQVRMEVQGEEE------KREDKEDEEDEEDD 332
EG EG G +EEGEG + +G+ E +GEEE + E++E E + E++
Sbjct: 834 EGEEEEGEGEEEEGEGEEEEGEGKGEEEGE---EGEGEEEGEEGEGEGEEEEGEGEGEEE 890
Query: 333 DVSHVDEEDCLGVQREDRRGGDGQINEQVEKLRRPEGASNESE 375
+EE+ G + E+ G+G+ E+ E EG E E
Sbjct: 891 GEGEGEEEEGEG-EGEEEGEGEGE-EEEGEGKGEEEGEEGEGE 931
Score = 37.7 bits (86), Expect = 0.017
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 17/100 (17%)
Query: 278 KEGHSPEGSTVTYHLLGPQEEGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHV 337
+EG EG G +EEGEG +G+ E +GEEE+ E + +EE E +
Sbjct: 869 EEGEEGEGE-------GEEEEGEG----EGEEEGEGEGEEEEGEGEGEEEGEGEG----- 912
Query: 338 DEEDCLGVQREDRRGGDGQINEQVEKLRRPEGASNESERD 377
+EE+ G E+ G+G+ E+ E E E E +
Sbjct: 913 EEEEGEGKGEEEGEEGEGE-GEEEEGEGEGEDGEGEGEEE 951
Score = 36.2 bits (82), Expect = 0.050
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Query: 279 EGHSPEGSTVTYHLLGPQEEGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVD 338
E EG G +E+GE D + +GEEE+ E + EE EE +V +
Sbjct: 767 EREKEEGERKKEERAGKEEKGEEEGD-------QGEGEEEETEGR-GEEKEEGGEVEGGE 818
Query: 339 EEDCLGVQREDRRGGDGQINEQVEKLRRPEGASNESE 375
E+ G + E+ G+G+ E + EG E E
Sbjct: 819 VEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGE 855
Score = 36.2 bits (82), Expect = 0.050
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 294 GPQEEGEGVVDVKGQVRMEVQGEEEKREDKEDE---EDEEDDDVSHVDEEDCLGVQREDR 350
G +EEGEG + +G+ E +GEEE+ E + ++ E EE++ +EE+ G + E+
Sbjct: 912 GEEEEGEGKGEEEGE-EGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEG-EGEEE 969
Query: 351 RGGDGQINEQVEKLRRPEGASNESE 375
G+G+ E + EG E E
Sbjct: 970 GEGEGEEGEGEGEEEEGEGEGEEEE 994
Score = 35.4 bits (80), Expect = 0.085
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 11/102 (10%)
Query: 278 KEGHSPEGSTVTYHLLGPQEEGEGV-VDVKGQVRMEV---QGEEEKREDKEDEEDEEDDD 333
+EG EG G +EEGEG D +G+ E +GEEE+ E + +EE E + +
Sbjct: 923 EEGEEGEGE-------GEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGE 975
Query: 334 VSHVDEEDCLGVQREDRRGGDGQINEQVEKLRRPEGASNESE 375
+ E+ G + G+ + E+ E EG E E
Sbjct: 976 EGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEE 1017
Score = 35.0 bits (79), Expect = 0.11
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 9/107 (8%)
Query: 270 ESTSSSPGKEGHSPEGSTVTYHLLGPQEEGEGVVDVKGQVRMEVQGE-EEKREDKEDEED 328
E G +G E T G EE E +V+G E +GE EE+ E+ E EE+
Sbjct: 784 EEKGEEEGDQGEGEEEETE-----GRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEE 838
Query: 329 EEDDDVSHVDEEDCLGVQREDRRGGDGQINEQVEKLRRPEGASNESE 375
E + + + E+ G + + G +G+ E+ E+ EG E E
Sbjct: 839 EGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEE---GEGEGEEEE 882
Score = 34.3 bits (77), Expect = 0.19
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 270 ESTSSSPGKEGHSPEGSTVTYHLLGPQE-EGEGVVDVKGQVRMEVQGEEEKREDKEDEED 328
E G+E EG G +E EGEG + +G+ + E +GEE + E +E+E +
Sbjct: 880 EEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEE-EGEGKGEEEGEEGEGEGEEEEGE 938
Query: 329 EEDDDVSHVDEEDCLGVQREDRRGGDGQINEQVEKLRRPEGASNESE 375
E +D EE+ G + G+G+ E+ E EG E E
Sbjct: 939 GEGEDGEGEGEEE-EGEWEGEEEEGEGEGEEEGE----GEGEEGEGE 980
Score = 33.1 bits (74), Expect = 0.42
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Query: 279 EGHSPEGSTVTYHLLGPQEEGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVD 338
EG E V + G + EGEG E +GEEE E +++ E EE+ +
Sbjct: 1012 EGEEEEEGEVEGEVEGEEGEGEGE---------EEEGEEEGEEREKEGEGEENRRNREEE 1062
Query: 339 EEDCLGVQREDRRGGDGQINEQVEKLRRPEGA 370
EE+ Q + Q E+ +K+ + +G+
Sbjct: 1063 EEEEGKYQETGEEENERQDGEEYKKVSKIKGS 1094
Score = 31.6 bits (70), Expect = 1.2
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 13/110 (11%)
Query: 279 EGHSPEGSTVTYHLL------GPQEEGEGVVDVKGQVRMEVQGEEE-KREDKEDEEDEED 331
+G EGS+ H G +++G G ++ G+ E+ +EE K+ D E++E +E
Sbjct: 656 DGTCEEGSSGAEHWQDEEREKGEKDKGRGEMERPGEGEKELAEKEEWKKRDGEEQEQKER 715
Query: 332 DDVSHVDEEDCLGVQREDRRG------GDGQINEQVEKLRRPEGASNESE 375
+ + + E+ G GD + E+ E + EG E E
Sbjct: 716 EQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVE 765
Score = 30.4 bits (67), Expect = 2.7
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 14/84 (16%)
Query: 294 GPQEEGEGVVDVKGQVRMEVQGEEEKREDKEDE--EDEEDDDVSHVDEEDCLGVQREDRR 351
G +E GEG E +G+ E+ E+KE E E+ E ++V E++ G ++++ R
Sbjct: 731 GEEEHGEGE---------EEEGDREEEEEKEGEGKEEGEGEEVEGEREKE-EGERKKEER 780
Query: 352 GGDGQINEQVEKLRRPEGASNESE 375
G + E E+ + EG E+E
Sbjct: 781 AGKEEKGE--EEGDQGEGEEEETE 802
Score = 29.3 bits (64), Expect = 6.1
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 14/82 (17%)
Query: 296 QEEGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVDEEDCLGVQREDRRGGDG 355
Q+E E + ME GEEE E +E+E D E+ EE+ G +E+ G
Sbjct: 712 QKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREE-------EEEKEGEGKEEGEG--- 761
Query: 356 QINEQVEKLR-RPEGASNESER 376
E+VE R + EG + ER
Sbjct: 762 ---EEVEGEREKEEGERKKEER 780
>gi|82830428 gon-4-like isoform b [Homo sapiens]
Length = 1529
Score = 40.4 bits (93), Expect = 0.003
Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 6/114 (5%)
Query: 244 PVKSPSPSSPAAVNHHSSSDISPVSNESTSSSPGKEGH--SPEGSTVTYHLLGPQEEGEG 301
P K+PS S S +D++ S+++ SS E SP G + Q G
Sbjct: 1386 PTKTPSSSQEPPDEGTSGTDVNKGSSKNALSSMDPEVRLSSPPGKPEDSSSVDGQSVGTP 1445
Query: 302 VVDVKGQVRMEVQG-EEEKREDKEDEEDEEDDDVSHVDEEDCLGVQREDRRGGD 354
V G E G EEE+ ED +D +E+D++S EE L V R G+
Sbjct: 1446 VGPETGG---EKNGPEEEEEEDFDDLTQDEEDEMSSASEESVLSVPELQVRAGE 1496
>gi|116235474 LKB1 interacting protein [Homo sapiens]
Length = 1099
Score = 40.4 bits (93), Expect = 0.003
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 19/103 (18%)
Query: 259 HSSSDISPVSNESTSSSPGKEGHSPEGSTVTYHLLGPQEEGEGVVD----VKGQVRMEVQ 314
H +P+ T+S+P S +G PQEE G + + +VR E Q
Sbjct: 447 HLEPSGNPLPATPTTSAPSAPPASSQGPDTAPRPSPPQEEARGPQESPQKMSEEVRAEPQ 506
Query: 315 GEEEKREDKED---------------EEDEEDDDVSHVDEEDC 342
EEE++E KE+ EE+EE+ D V+ E C
Sbjct: 507 EEEEEKEGKEEKEEGEMVEQGEEEAGEEEEEEQDQKEVEAELC 549
>gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo
sapiens]
Length = 5033
Score = 40.0 bits (92), Expect = 0.003
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 300 EGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVDEEDCL----GVQREDRRGGDG 355
E V + + EV EEE+ ED+E+E +EED++ DEE+ ++E+ +G
Sbjct: 1857 EDVKQILKMIEPEVFTEEEEEEDEEEEGEEEDEEEKEEDEEETAQEKEDEEKEEEEAAEG 1916
Query: 356 QINEQVEK 363
+ E +E+
Sbjct: 1917 EKEEGLEE 1924
>gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo
sapiens]
Length = 5038
Score = 40.0 bits (92), Expect = 0.003
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 300 EGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVDEEDCL----GVQREDRRGGDG 355
E V + + EV EEE+ ED+E+E +EED++ DEE+ ++E+ +G
Sbjct: 1857 EDVKQILKMIEPEVFTEEEEEEDEEEEGEEEDEEEKEEDEEETAQEKEDEEKEEEEAAEG 1916
Query: 356 QINEQVEK 363
+ E +E+
Sbjct: 1917 EKEEGLEE 1924
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 40.0 bits (92), Expect = 0.003
Identities = 52/237 (21%), Positives = 99/237 (41%), Gaps = 11/237 (4%)
Query: 143 KQLERMEAGLSELSGSVAQTVTQLQTTLASVQELLIQQQQKIQELAHELAAAKATTSTNW 202
K+LE +EA E + Q + + ++ ++++ K+ + A A+A +
Sbjct: 367 KRLEELEAKRKE-EERLEQEKRERKKQKEKERKERLKKEGKLLTKSQREARARAEATLK- 424
Query: 203 ILESQNINELKSEINSLKGLLLNRRQFPPSPSAPKIPSWQIPVKSPSPSSPAAVNHHSSS 262
+L++Q + E+ S K L +R KIP Q+ K S S
Sbjct: 425 LLQAQGV-----EVPS-KDSLPKKRPIYEDKKRKKIPQ-QLESKEVSESMELCAAVEVME 477
Query: 263 DISPVSNESTSS-SPGKEGHSPEGSTVTYHLLGPQEEGEGVVDVKGQVRMEVQGEEEKRE 321
P E+ P +E + + + + EE E V K + ++ EEE+ E
Sbjct: 478 QGVPEKEETPPPVEPEEEEDTEDAGLDDWEAMASDEETEKVEGNKVHIEVKENPEEEEEE 537
Query: 322 DKEDEEDEEDDDVSHVD-EEDCLGVQREDRRGGDGQINEQVEKLRRPEGASNESERD 377
++E+EEDEE ++ + E + ED + D + + + + + S++SE D
Sbjct: 538 EEEEEEDEESEEEEEEEGESEGSEGDEEDEKVSDEKDSGKTLDKKPSKEMSSDSEYD 594
>gi|63252866 osteosarcoma amplified 9 isoform 2 precursor [Homo
sapiens]
Length = 612
Score = 39.7 bits (91), Expect = 0.004
Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 20/105 (19%)
Query: 293 LGPQEEGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVDEEDCLG-------- 344
+G ++ + +V + + +G+ E++ + E+EEDE++D+ DE LG
Sbjct: 383 IGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEG 442
Query: 345 ---------VQREDRRGGDGQIN---EQVEKLRRPEGASNESERD 377
++ E + G + ++ ++ EK P+G ESERD
Sbjct: 443 ILLPSDRDRLRSEVKAGMERELENIIQETEKELDPDGLKKESERD 487
>gi|5803109 osteosarcoma amplified 9 isoform 1 precursor [Homo
sapiens]
Length = 667
Score = 39.7 bits (91), Expect = 0.004
Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 20/105 (19%)
Query: 293 LGPQEEGEGVVDVKGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVDEEDCLG-------- 344
+G ++ + +V + + +G+ E++ + E+EEDE++D+ DE LG
Sbjct: 383 IGQEQPVDDAAEVPQREPEKERGDPERQREMEEEEDEDEDEDEDEDERQLLGEFEKELEG 442
Query: 345 ---------VQREDRRGGDGQIN---EQVEKLRRPEGASNESERD 377
++ E + G + ++ ++ EK P+G ESERD
Sbjct: 443 ILLPSDRDRLRSEVKAGMERELENIIQETEKELDPDGLKKESERD 487
>gi|4504425 high-mobility group box 1 [Homo sapiens]
Length = 215
Score = 39.3 bits (90), Expect = 0.006
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 295 PQEEGEGVVDV-KGQVRMEVQGEEEKREDKEDEEDEEDDDVSHVDEED 341
P +GVV K + + E + +EE ED+E+EEDEED+D D+++
Sbjct: 168 PDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 215
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.307 0.126 0.348
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,297,371
Number of Sequences: 37866
Number of extensions: 900767
Number of successful extensions: 16495
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 345
Number of HSP's successfully gapped in prelim test: 502
Number of HSP's that attempted gapping in prelim test: 8794
Number of HSP's gapped (non-prelim): 3995
length of query: 377
length of database: 18,247,518
effective HSP length: 104
effective length of query: 273
effective length of database: 14,309,454
effective search space: 3906480942
effective search space used: 3906480942
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.