Search of human proteins with 4758448

Search of human proteins with 4758448

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4758448 guanine nucleotide binding protein gamma 11
precursor [Homo sapiens]
         (73 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4758448 guanine nucleotide binding protein gamma 11 precursor...   149   6e-37
gi|11386179 guanine nucleotide binding protein (G protein), gamm...   117   2e-27
gi|14589849 guanine nucleotide binding protein-gamma transducing...    95   1e-20
gi|51036603 G-protein gamma-12 subunit [Homo sapiens]                  60   5e-10
gi|32698769 guanine nucleotide binding protein (G protein), gamm...    57   3e-09
gi|54114974 guanine nucleotide binding protein (G protein), gamm...    48   1e-06
gi|6912394 guanine nucleotide binding protein (G protein), gamma...    47   3e-06
gi|63055067 guanine nucleotide binding protein (G protein), gamm...    47   3e-06
gi|15147246 guanine nucleotide binding protein (G protein), gamm...    46   5e-06
gi|148922937 guanine nucleotide binding protein (G protein), gam...    44   2e-05
gi|148922892 guanine nucleotide binding protein (G protein), gam...    44   2e-05
gi|4758450 guanine nucleotide binding protein (G protein), gamma...    44   2e-05
gi|7706567 guanine nucleotide binding protein (G protein), gamma...    44   3e-05
gi|4885287 guanine nucleotide binding protein (G protein), gamma...    44   4e-05
gi|239750840 PREDICTED: hypothetical protein XP_002347578 [Homo ...    41   2e-04
gi|239745202 PREDICTED: hypothetical protein XP_002343408 [Homo ...    41   2e-04
gi|21361097 DNAJC25-GNG10 protein [Homo sapiens]                       37   0.004
gi|19923830 pre-B-cell leukemia homeobox interacting protein 1 [...    35   0.010
gi|48762942 huntingtin interacting protein-1-related [Homo sapiens]    33   0.063
gi|239750456 PREDICTED: similar to KIAA0655 protein [Homo sapiens]     33   0.063
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li...    32   0.082
gi|34878904 synaptonemal complex protein 1 [Homo sapiens]              32   0.082
gi|118498362 kinectin 1 isoform b [Homo sapiens]                       32   0.11 
gi|118498356 kinectin 1 isoform a [Homo sapiens]                       32   0.11 
gi|118498368 kinectin 1 isoform c [Homo sapiens]                       32   0.11 
gi|33620775 kinectin 1 isoform a [Homo sapiens]                        32   0.11 
gi|169213736 PREDICTED: similar to hCG1650801 [Homo sapiens]           32   0.11 
gi|169214197 PREDICTED: similar to hCG1650801 [Homo sapiens]           32   0.11 
gi|169213540 PREDICTED: similar to hCG1650801 [Homo sapiens]           32   0.11 
gi|157042792 coiled-coil domain containing 64B [Homo sapiens]          32   0.11 

>gi|4758448 guanine nucleotide binding protein gamma 11 precursor
          [Homo sapiens]
          Length = 73

 Score =  149 bits (375), Expect = 6e-37
 Identities = 73/73 (100%), Positives = 73/73 (100%)

Query: 1  MPALHIEDLPEKEKLKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPED 60
          MPALHIEDLPEKEKLKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPED
Sbjct: 1  MPALHIEDLPEKEKLKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPED 60

Query: 61 KNPFKEKGSCVIS 73
          KNPFKEKGSCVIS
Sbjct: 61 KNPFKEKGSCVIS 73


>gi|11386179 guanine nucleotide binding protein (G protein), gamma
          transducing activity polypeptide 1 [Homo sapiens]
          Length = 74

 Score =  117 bits (293), Expect = 2e-27
 Identities = 56/74 (75%), Positives = 66/74 (89%), Gaps = 1/74 (1%)

Query: 1  MPALHIEDLPEKEKLKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPED 60
          MP ++IEDL EK+KLKMEV+QL+KEV L+R  VSKC EE+++Y+EERSGEDPLVKGIPED
Sbjct: 1  MPVINIEDLTEKDKLKMEVDQLKKEVTLERMLVSKCCEEVRDYVEERSGEDPLVKGIPED 60

Query: 61 KNPFKE-KGSCVIS 73
          KNPFKE KG CVIS
Sbjct: 61 KNPFKELKGGCVIS 74


>gi|14589849 guanine nucleotide binding protein-gamma transducing
          activity polypeptide 2 [Homo sapiens]
          Length = 69

 Score = 95.1 bits (235), Expect = 1e-20
 Identities = 44/67 (65%), Positives = 54/67 (80%)

Query: 7  EDLPEKEKLKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKE 66
          +DL EK+ LKMEVEQL+KEVK  R  +SK  +EIK Y+E ++G DP +KGIPEDKNPFKE
Sbjct: 3  QDLSEKDLLKMEVEQLKKEVKNTRIPISKAGKEIKEYVEAQAGNDPFLKGIPEDKNPFKE 62

Query: 67 KGSCVIS 73
          KG C+IS
Sbjct: 63 KGGCLIS 69


>gi|51036603 G-protein gamma-12 subunit [Homo sapiens]
          Length = 72

 Score = 59.7 bits (143), Expect = 5e-10
 Identities = 26/54 (48%), Positives = 39/54 (72%)

Query: 19 VEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKEKGSCVI 72
          V+QLR E  ++R +VSK S ++ +Y EE +  DPL+ GIP  +NPFK+K +C+I
Sbjct: 18 VQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLIGIPTSENPFKDKKTCII 71


>gi|32698769 guanine nucleotide binding protein (G protein), gamma
          7 [Homo sapiens]
          Length = 68

 Score = 57.0 bits (136), Expect = 3e-09
 Identities = 24/54 (44%), Positives = 38/54 (70%)

Query: 19 VEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKEKGSCVI 72
          VEQLR E  ++R +VSK + ++ +Y E+ +  DPL+ G+P  +NPFK+K  C+I
Sbjct: 14 VEQLRIEAGIERIKVSKAASDLMSYCEQHARNDPLLVGVPASENPFKDKKPCII 67


>gi|54114974 guanine nucleotide binding protein (G protein), gamma
          2 [Homo sapiens]
          Length = 71

 Score = 48.1 bits (113), Expect = 1e-06
 Identities = 21/49 (42%), Positives = 32/49 (65%)

Query: 19 VEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKEK 67
          VEQL+ E  + R +VSK + ++  Y E  + EDPL+  +P  +NPF+EK
Sbjct: 16 VEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPFREK 64


>gi|6912394 guanine nucleotide binding protein (G protein), gamma
          3 [Homo sapiens]
          Length = 75

 Score = 47.0 bits (110), Expect = 3e-06
 Identities = 21/49 (42%), Positives = 32/49 (65%)

Query: 19 VEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKEK 67
          VEQL+ E  L R +VSK + ++  Y +  + EDPL+  +P  +NPF+EK
Sbjct: 20 VEQLKIEASLCRIKVSKAAADLMTYCDAHACEDPLITPVPTSENPFREK 68


>gi|63055067 guanine nucleotide binding protein (G protein), gamma
          10 [Homo sapiens]
          Length = 68

 Score = 47.0 bits (110), Expect = 3e-06
 Identities = 21/58 (36%), Positives = 37/58 (63%)

Query: 15 LKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKEKGSCVI 72
          L+  VEQL+ E  ++R +VS+ + E++ Y  + + +D L+ G+P   NPF+E  SC +
Sbjct: 10 LQRLVEQLKLEAGVERIKVSQAAAELQQYCMQNACKDALLVGVPAGSNPFREPRSCAL 67


>gi|15147246 guanine nucleotide binding protein (G protein), gamma
          8 [Homo sapiens]
          Length = 70

 Score = 46.2 bits (108), Expect = 5e-06
 Identities = 20/49 (40%), Positives = 33/49 (67%)

Query: 19 VEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKEK 67
          VEQL+ EV + R +VS+ + E+  + E  + +DPLV  +P  +NPF++K
Sbjct: 15 VEQLKLEVNIDRMKVSQAAAELLAFCETHAKDDPLVTPVPAAENPFRDK 63


>gi|148922937 guanine nucleotide binding protein (G protein),
          gamma 4 [Homo sapiens]
          Length = 75

 Score = 44.3 bits (103), Expect = 2e-05
 Identities = 20/49 (40%), Positives = 31/49 (63%)

Query: 19 VEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKEK 67
          VEQL+ E  + R +VS+ + ++  Y E    EDPL+  +P  +NPF+EK
Sbjct: 20 VEQLKMEACMDRVKVSQAAADLLAYCEAHVREDPLIIPVPASENPFREK 68


>gi|148922892 guanine nucleotide binding protein (G protein),
          gamma 4 [Homo sapiens]
          Length = 75

 Score = 44.3 bits (103), Expect = 2e-05
 Identities = 20/49 (40%), Positives = 31/49 (63%)

Query: 19 VEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKEK 67
          VEQL+ E  + R +VS+ + ++  Y E    EDPL+  +P  +NPF+EK
Sbjct: 20 VEQLKMEACMDRVKVSQAAADLLAYCEAHVREDPLIIPVPASENPFREK 68


>gi|4758450 guanine nucleotide binding protein (G protein), gamma
          4 [Homo sapiens]
          Length = 75

 Score = 44.3 bits (103), Expect = 2e-05
 Identities = 20/49 (40%), Positives = 31/49 (63%)

Query: 19 VEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKEK 67
          VEQL+ E  + R +VS+ + ++  Y E    EDPL+  +P  +NPF+EK
Sbjct: 20 VEQLKMEACMDRVKVSQAAADLLAYCEAHVREDPLIIPVPASENPFREK 68


>gi|7706567 guanine nucleotide binding protein (G protein), gamma
          13 [Homo sapiens]
          Length = 67

 Score = 43.9 bits (102), Expect = 3e-05
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 3/65 (4%)

Query: 8  DLPEKEKLKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKEK 67
          D+P+   +K EVE L+ ++  QR+  SK   E+  +IE+   +DP +       NP+ EK
Sbjct: 5  DVPQ---MKKEVESLKYQLAFQREMASKTIPELLKWIEDGIPKDPFLNPDLMKNNPWVEK 61

Query: 68 GSCVI 72
          G C I
Sbjct: 62 GKCTI 66


>gi|4885287 guanine nucleotide binding protein (G protein), gamma
          5 [Homo sapiens]
          Length = 68

 Score = 43.5 bits (101), Expect = 4e-05
 Identities = 19/56 (33%), Positives = 33/56 (58%)

Query: 15 LKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKEKGSC 70
          +K  V+QLR E  L R +VS+ + ++K +  + +  DPL+ G+    NPF+ +  C
Sbjct: 10 MKKVVQQLRLEAGLNRVKVSQAAADLKQFCLQNAQHDPLLTGVSSSTNPFRPQKVC 65


>gi|239750840 PREDICTED: hypothetical protein XP_002347578 [Homo
          sapiens]
          Length = 68

 Score = 40.8 bits (94), Expect = 2e-04
 Identities = 20/58 (34%), Positives = 34/58 (58%)

Query: 15 LKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKEKGSCVI 72
          L+  VEQL+ E  ++R  VS+ + E++ Y  + + +D L+ G+    NPF E  SC +
Sbjct: 10 LQCLVEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFWEPRSCAL 67


>gi|239745202 PREDICTED: hypothetical protein XP_002343408 [Homo
          sapiens]
          Length = 68

 Score = 40.8 bits (94), Expect = 2e-04
 Identities = 20/58 (34%), Positives = 34/58 (58%)

Query: 15 LKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKEKGSCVI 72
          L+  VEQL+ E  ++R  VS+ + E++ Y  + + +D L+ G+    NPF E  SC +
Sbjct: 10 LQCLVEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVLAGSNPFWEPRSCAL 67


>gi|21361097 DNAJC25-GNG10 protein [Homo sapiens]
          Length = 153

 Score = 36.6 bits (83), Expect = 0.004
 Identities = 14/41 (34%), Positives = 26/41 (63%)

Query: 32  QVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKEKGSCVI 72
           +VS+ + E++ Y  + + +D L+ G+P   NPF+E  SC +
Sbjct: 112 KVSQAAAELQQYCMQNACKDALLVGVPAGSNPFREPRSCAL 152


>gi|19923830 pre-B-cell leukemia homeobox interacting protein 1
           [Homo sapiens]
          Length = 731

 Score = 35.4 bits (80), Expect = 0.010
 Identities = 15/51 (29%), Positives = 32/51 (62%)

Query: 9   LPEKEKLKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPE 59
           L +KE+L+ E + LR+E++ QR+ +    ++++  +++ S  DP   G+ E
Sbjct: 381 LKQKEQLEAEAQALRQELERQRRLLGSVQQDLERSLQDASRGDPAHAGLAE 431


>gi|48762942 huntingtin interacting protein-1-related [Homo sapiens]
          Length = 1068

 Score = 32.7 bits (73), Expect = 0.063
 Identities = 14/39 (35%), Positives = 28/39 (71%)

Query: 12  KEKLKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGE 50
           KE+L  +VEQ+++E +L+ ++ S   E++K  +E ++GE
Sbjct: 489 KEQLAFQVEQVKRESELKLEEKSDQLEKLKRELEAKAGE 527



 Score = 32.0 bits (71), Expect = 0.11
 Identities = 14/56 (25%), Positives = 32/56 (57%)

Query: 12  KEKLKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKEK 67
           K+   +++E L++EV++ R ++ K   E + YI +   +   ++G  E++   K+K
Sbjct: 349 KDDRDLQIESLKREVEMLRSELEKIKLEAQRYIAQLKSQVNALEGELEEQRKQKQK 404


>gi|239750456 PREDICTED: similar to KIAA0655 protein [Homo sapiens]
          Length = 1048

 Score = 32.7 bits (73), Expect = 0.063
 Identities = 14/39 (35%), Positives = 28/39 (71%)

Query: 12  KEKLKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGE 50
           KE+L  +VEQ+++E +L+ ++ S   E++K  +E ++GE
Sbjct: 469 KEQLAFQVEQVKRESELKLEEKSDQLEKLKRELEAKAGE 507



 Score = 32.0 bits (71), Expect = 0.11
 Identities = 14/56 (25%), Positives = 32/56 (57%)

Query: 12  KEKLKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKEK 67
           K+   +++E L++EV++ R ++ K   E + YI +   +   ++G  E++   K+K
Sbjct: 329 KDDRDLQIESLKREVEMLRSELEKIKLEAQRYIAQLKSQVNALEGELEEQRKQKQK 384


>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
           [Homo sapiens]
          Length = 899

 Score = 32.3 bits (72), Expect = 0.082
 Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 2/61 (3%)

Query: 7   EDLPEKEKLKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKE 66
           E + E+EK+  +VE++R+E K+Q Q+     +E K   EER  E    K + E++   +E
Sbjct: 411 ERMREQEKMWEQVEKMREEKKMQEQEKKTRDQEEKMQEEERIRERE--KKMREEEETMRE 468

Query: 67  K 67
           +
Sbjct: 469 Q 469



 Score = 27.7 bits (60), Expect = 2.0
 Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 7   EDLPEKEKLKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKE 66
           E + E+E+++   +++R+E +  R+Q  K  ++ +N  E+   E    + +PE K    E
Sbjct: 444 EKMQEEERIREREKKMREEEETMREQEEKMQKQEENMWEQEEKEWQQQR-LPEQKEKLWE 502

Query: 67  K 67
           +
Sbjct: 503 Q 503



 Score = 26.2 bits (56), Expect = 5.9
 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 11  EKEKLKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKEK 67
           + E+L+ + E++R++ K+  +QV K  EE K   +E+   D   K   E++   +EK
Sbjct: 402 QDERLREKEERMREQEKMW-EQVEKMREEKKMQEQEKKTRDQEEKMQEEERIREREK 457



 Score = 25.8 bits (55), Expect = 7.7
 Identities = 10/40 (25%), Positives = 25/40 (62%)

Query: 7   EDLPEKEKLKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEE 46
           E + E+E+++   +++R+E ++ R+Q  K  E+ +   E+
Sbjct: 583 EKMREEERMREREKKMREEEEMMREQEEKMQEQEEKMQEQ 622


>gi|34878904 synaptonemal complex protein 1 [Homo sapiens]
          Length = 976

 Score = 32.3 bits (72), Expect = 0.082
 Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 5/69 (7%)

Query: 6   IEDLPEKE-KLKMEVEQLRKEVKLQRQQV----SKCSEEIKNYIEERSGEDPLVKGIPED 60
           IE+L E E +L+ E+E +R+E+K +R +V     K  E   N  ++   ++  ++ + ++
Sbjct: 562 IENLQETETQLRNELEYVREELKQKRDEVKCKLDKSEENCNNLRKQVENKNKYIEELQQE 621

Query: 61  KNPFKEKGS 69
               K+KG+
Sbjct: 622 NKALKKKGT 630


>gi|118498362 kinectin 1 isoform b [Homo sapiens]
          Length = 1306

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 14/42 (33%), Positives = 26/42 (61%)

Query: 9   LPEKEKLKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGE 50
           L ++E  K   EQ   ++K+Q Q+  +  EE+++YI +R+ E
Sbjct: 469 LQQEEVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTAE 510


>gi|118498356 kinectin 1 isoform a [Homo sapiens]
          Length = 1357

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 14/42 (33%), Positives = 26/42 (61%)

Query: 9   LPEKEKLKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGE 50
           L ++E  K   EQ   ++K+Q Q+  +  EE+++YI +R+ E
Sbjct: 469 LQQEEVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTAE 510


>gi|118498368 kinectin 1 isoform c [Homo sapiens]
          Length = 1300

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 14/42 (33%), Positives = 26/42 (61%)

Query: 9   LPEKEKLKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGE 50
           L ++E  K   EQ   ++K+Q Q+  +  EE+++YI +R+ E
Sbjct: 469 LQQEEVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTAE 510


>gi|33620775 kinectin 1 isoform a [Homo sapiens]
          Length = 1357

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 14/42 (33%), Positives = 26/42 (61%)

Query: 9   LPEKEKLKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGE 50
           L ++E  K   EQ   ++K+Q Q+  +  EE+++YI +R+ E
Sbjct: 469 LQQEEVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTAE 510


>gi|169213736 PREDICTED: similar to hCG1650801 [Homo sapiens]
          Length = 69

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)

Query: 19 VEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKEK 67
          VEQL+ E  + +    K + ++  +  E++  DP + GIP   N FKEK
Sbjct: 18 VEQLQMEAGIDQV---KMAADLLKFCTEQAKNDPFLVGIPAATNSFKEK 63


>gi|169214197 PREDICTED: similar to hCG1650801 [Homo sapiens]
          Length = 69

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)

Query: 19 VEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKEK 67
          VEQL+ E  + +    K + ++  +  E++  DP + GIP   N FKEK
Sbjct: 18 VEQLQMEAGIDQV---KMAADLLKFCTEQAKNDPFLVGIPAATNSFKEK 63


>gi|169213540 PREDICTED: similar to hCG1650801 [Homo sapiens]
          Length = 69

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)

Query: 19 VEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDPLVKGIPEDKNPFKEK 67
          VEQL+ E  + +    K + ++  +  E++  DP + GIP   N FKEK
Sbjct: 18 VEQLQMEAGIDQV---KMAADLLKFCTEQAKNDPFLVGIPAATNSFKEK 63


>gi|157042792 coiled-coil domain containing 64B [Homo sapiens]
          Length = 508

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 3/46 (6%)

Query: 7   EDLPEKEKLKMEVEQLRKEVKLQRQQVSKCSEEIKNYIEERSGEDP 52
           E L EKE   +EV +L+ E+ LQ+ ++    EE++   E R+ EDP
Sbjct: 354 EILEEKE---VEVAKLQDEISLQQAELQSLREELQRQKELRAQEDP 396


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.308    0.131    0.357 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,148,360
Number of Sequences: 37866
Number of extensions: 124682
Number of successful extensions: 1609
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 1247
Number of HSP's gapped (non-prelim): 451
length of query: 73
length of database: 18,247,518
effective HSP length: 46
effective length of query: 27
effective length of database: 16,505,682
effective search space: 445653414
effective search space used: 445653414
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.