Guide to the Human Genome
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Name: LOC100289060 Sequence: fasta or formatted (68aa) NCBI GI: 239745202
Description:

PREDICTED: hypothetical protein XP_002343408

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            16.2         11           3
 C cysteine            5.9          4           1
 D aspartate           1.5          1           1
 E glutamate           7.4          5           1
 F phenylalanine       1.5          1           1
 G glycine             5.9          4           1
 H histidine           0.0          0           0
 I isoleucine          1.5          1           1
 K lysine              2.9          2           1
 L leucine            14.7         10           2
 M methionine          2.9          2           1
 N asparagine          4.4          3           1
 P proline             2.9          2           1
 Q glutamine           8.8          6           2
 R arginine            2.9          2           1
 S serine             10.3          7           2
 T threonine           0.0          0           0
 V valine              7.4          5           1
 W tryptophan          1.5          1           1
 Y tyrosine            1.5          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein XP_002343408 
LOC100291110          1.000   PREDICTED: hypothetical protein XP_002347578 
GNG10                 0.865   guanine nucleotide binding protein (G protein), gamm...
DNAJC25-GNG10         0.514   DNAJC25-GNG10 protein 
GNG5                  0.432   guanine nucleotide binding protein (G protein), gamma...
GNG7                  0.396   guanine nucleotide binding protein (G protein), gamm...
GNG12                 0.315   G-protein gamma-12 subunit 
GNG2                  0.315   guanine nucleotide binding protein (G protein), gamm...
GNG3                  0.288   guanine nucleotide binding protein (G protein), gamma...
GNG4                  0.261   guanine nucleotide binding protein (G protein), gam...
GNG4                  0.261   guanine nucleotide binding protein (G protein), gam...
GNG4                  0.261   guanine nucleotide binding protein (G protein), gamma...
GNG8                  0.243   guanine nucleotide binding protein (G protein), gamm...
LOC648044             0.180   PREDICTED: similar to hCG1650801 
LOC648044             0.180   PREDICTED: similar to hCG1650801 
LOC648044             0.180   PREDICTED: similar to hCG1650801 
GNG11                 0.144   guanine nucleotide binding protein gamma 11 precursor...
GNGT1                 0.108   guanine nucleotide binding protein (G protein), gamm...
GNG13                 0.027   guanine nucleotide binding protein (G protein), gamma...
MCTP2                 0.018   multiple C2 domains, transmembrane 2 isoform 2 [Hom...
MCTP2                 0.018   multiple C2 domains, transmembrane 2 isoform 1 [Hom...
MCTP2                 0.018   multiple C2 domains, transmembrane 2 isoform 3 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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