Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ARRB2 Sequence: fasta or formatted (409aa) NCBI GI: 4757780
Description:

arrestin, beta 2 isoform 1

Referenced in:

Hedgehog and Related Pathways
MAP Kinase Pathways

Other entries for this name:
alt prot [394aa] arrestin, beta 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         20           2
 C cysteine            2.2          9           1
 D aspartate           8.8         36           3
 E glutamate           4.9         20           2
 F phenylalanine       4.9         20           3
 G glycine             4.6         19           2
 H histidine           2.9         12           1
 I isoleucine          2.9         12           1
 K lysine              8.1         33           2
 L leucine            10.3         42           2
 M methionine          1.0          4           1
 N asparagine          3.2         13           2
 P proline             7.8         32           2
 Q glutamine           3.4         14           1
 R arginine            5.9         24           1
 S serine              5.9         24           2
 T threonine           5.9         24           2
 V valine              9.5         39           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.9         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   arrestin, beta 2 isoform 1 
ARRB2                 0.949   arrestin, beta 2 isoform 2 
ARRB1                 0.778   arrestin beta 1 isoform B 
ARRB1                 0.768   arrestin beta 1 isoform A 
ARR3                  0.484   arrestin 3, retinal (X-arrestin) 
SAG                   0.480   S-arrestin 
ARRDC1                0.017   arrestin domain containing 1 
FAM185A               0.007   hypothetical protein LOC222234 isoform 2 
RNF112                0.007   ring finger protein 112 
TRIP6                 0.006   thyroid receptor-interacting protein 6 
ARRDC5                0.006   arrestin domain containing 5 
PEAR1                 0.006   platelet endothelial aggregation receptor 1 
CRTC1                 0.005   mucoepidermoid carcinoma translocated 1 isoform 3 [...
CRTC1                 0.005   mucoepidermoid carcinoma translocated 1 isoform 1 [...
LRRC68                0.005   PREDICTED: leucine rich repeat containing 68 
LRRC68                0.005   PREDICTED: leucine rich repeat containing 68 
LRRC68                0.005   PREDICTED: leucine rich repeat containing 68 
FOXD1                 0.005   forkhead box D1 
RICH2                 0.005   Rho GTPase-activating protein RICH2 
ZYX                   0.005   zyxin 
ZYX                   0.005   zyxin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press