Guide to the Human Genome
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Name: ARR3 Sequence: fasta or formatted (388aa) NCBI GI: 156071467
Description:

arrestin 3, retinal (X-arrestin)

Referenced in:

Photoreceptors and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         22           2
 C cysteine            2.1          8           1
 D aspartate           5.9         23           2
 E glutamate           7.2         28           3
 F phenylalanine       3.9         15           1
 G glycine             6.2         24           2
 H histidine           1.8          7           1
 I isoleucine          5.2         20           2
 K lysine              7.0         27           2
 L leucine            10.1         39           2
 M methionine          1.5          6           1
 N asparagine          2.8         11           2
 P proline             5.7         22           2
 Q glutamine           4.1         16           1
 R arginine            4.1         16           2
 S serine              8.0         31           3
 T threonine           5.7         22           1
 V valine             10.3         40           2
 W tryptophan          0.3          1           1
 Y tyrosine            2.6         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   arrestin 3, retinal (X-arrestin) 
ARRB1                 0.591   arrestin beta 1 isoform A 
ARRB1                 0.568   arrestin beta 1 isoform B 
ARRB2                 0.528   arrestin, beta 2 isoform 1 
SAG                   0.483   S-arrestin 
ARRB2                 0.480   arrestin, beta 2 isoform 2 
NCAN                  0.008   chondroitin sulfate proteoglycan 3 
AHNAK                 0.008   AHNAK nucleoprotein isoform 1 
ANKRD43               0.008   ankyrin repeat domain 43 
ZFP161                0.007   zinc finger protein 161 homolog 
ZFP161                0.007   zinc finger protein 161 homolog 
LOC100130128          0.005   PREDICTED: hypothetical protein 
LOC100130128          0.005   PREDICTED: hypothetical protein 
LOC100130128          0.005   PREDICTED: hypothetical protein 
ZBTB5                 0.005   zinc finger and BTB domain containing 5 
ARRDC4                0.005   arrestin domain containing 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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