Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ARRB1 Sequence: fasta or formatted (410aa) NCBI GI: 10880134
Description:

arrestin beta 1 isoform B

Referenced in:

Catecholamines

Other entries for this name:
alt prot [418aa] arrestin beta 1 isoform A
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         22           1
 C cysteine            1.7          7           1
 D aspartate           7.3         30           3
 E glutamate           8.5         35           4
 F phenylalanine       3.9         16           1
 G glycine             5.4         22           2
 H histidine           2.2          9           1
 I isoleucine          3.7         15           2
 K lysine              8.5         35           2
 L leucine             9.5         39           2
 M methionine          1.2          5           1
 N asparagine          4.6         19           2
 P proline             7.3         30           2
 Q glutamine           2.4         10           1
 R arginine            5.9         24           2
 S serine              3.7         15           2
 T threonine           6.6         27           2
 V valine              9.0         37           2
 W tryptophan          0.0          0           0
 Y tyrosine            3.2         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   arrestin beta 1 isoform B 
ARRB1                 0.991   arrestin beta 1 isoform A 
ARRB2                 0.781   arrestin, beta 2 isoform 1 
ARRB2                 0.736   arrestin, beta 2 isoform 2 
ARR3                  0.523   arrestin 3, retinal (X-arrestin) 
SAG                   0.514   S-arrestin 
ARRDC5                0.015   arrestin domain containing 5 
ARRDC1                0.014   arrestin domain containing 1 
ARRDC2                0.009   arrestin domain containing 2 isoform 2 
ARRDC2                0.009   arrestin domain containing 2 isoform 1 
PRPF40B               0.009   Huntingtin interacting protein C isoform 2 
PRPF40B               0.009   Huntingtin interacting protein C isoform 1 
HNRNPC                0.007   heterogeneous nuclear ribonucleoprotein C isoform b...
HNRNPC                0.007   heterogeneous nuclear ribonucleoprotein C isoform a...
HNRNPC                0.007   heterogeneous nuclear ribonucleoprotein C isoform b...
HNRNPC                0.007   heterogeneous nuclear ribonucleoprotein C isoform a...
LRRC68                0.007   PREDICTED: leucine rich repeat containing 68 
LRRC68                0.007   PREDICTED: leucine rich repeat containing 68 
LRRC68                0.007   PREDICTED: leucine rich repeat containing 68 
MYBBP1A               0.007   MYB binding protein 1a isoform 1 
MYBBP1A               0.007   MYB binding protein 1a isoform 2 
DST                   0.007   dystonin isoform 4 
DST                   0.007   dystonin isoform 3 
DST                   0.007   dystonin isoform 2 
DST                   0.007   dystonin isoform 1 
DST                   0.007   dystonin isoform 1eA precursor 
ARRDC4                0.007   arrestin domain containing 4 
GNAQ                  0.006   guanine nucleotide binding protein (G protein), q po...
HNRNPCL1              0.006   heterogeneous nuclear ribonucleoprotein C-like 1 [Ho...
APC                   0.006   adenomatous polyposis coli 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press