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Search of human proteins with 47106061
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|47106061 KRAB-A domain containing 2 [Homo sapiens]
(492 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|47106061 KRAB-A domain containing 2 [Homo sapiens] 995 0.0
gi|46195755 SCAN domain containing 3 [Homo sapiens] 439 e-123
gi|116812606 zinc finger, H2C2 domain containing [Homo sapiens] 52 9e-07
gi|145701019 zinc finger protein 655 isoform b [Homo sapiens] 43 6e-04
gi|13129036 zinc finger protein 655 isoform b [Homo sapiens] 43 6e-04
gi|110349778 zinc finger protein 273 [Homo sapiens] 41 0.002
gi|28274686 zinc finger protein 82 homolog [Homo sapiens] 41 0.003
gi|239753095 PREDICTED: similar to hCG1725380 [Homo sapiens] 40 0.004
gi|239747658 PREDICTED: similar to hCG1725380 [Homo sapiens] 40 0.004
gi|239741529 PREDICTED: similar to hCG1725380 [Homo sapiens] 40 0.004
gi|61676102 zinc finger protein 789 isoform 1 [Homo sapiens] 40 0.006
gi|116875829 zinc finger protein 20 [Homo sapiens] 39 0.008
gi|134254457 zinc finger protein 665 [Homo sapiens] 39 0.008
gi|153792259 zinc finger protein 778 [Homo sapiens] 39 0.008
gi|21362078 zinc finger protein 649 [Homo sapiens] 39 0.011
gi|47271376 zinc finger protein 615 [Homo sapiens] 39 0.011
gi|22095393 zinc finger protein 420 [Homo sapiens] 39 0.014
gi|156627557 zinc finger protein 554 [Homo sapiens] 39 0.014
gi|223890215 zinc finger protein 566 isoform 1 [Homo sapiens] 38 0.018
gi|14523054 zinc finger protein 566 isoform 1 [Homo sapiens] 38 0.018
gi|223890212 zinc finger protein 566 isoform 1 [Homo sapiens] 38 0.018
gi|28274682 zinc finger protein 33A isoform b [Homo sapiens] 38 0.018
gi|154759253 zinc finger protein 404 [Homo sapiens] 38 0.018
gi|110347446 zinc finger protein 33A isoform a [Homo sapiens] 38 0.018
gi|239757205 PREDICTED: zinc finger protein 66 [Homo sapiens] 38 0.024
gi|239751712 PREDICTED: zinc finger protein 66 [Homo sapiens] 38 0.024
gi|239746217 PREDICTED: zinc finger protein 66 [Homo sapiens] 38 0.024
gi|24307875 zinc finger protein 33B [Homo sapiens] 38 0.024
gi|72534736 zinc finger protein 613 isoform 1 [Homo sapiens] 38 0.024
gi|224586807 zinc finger protein 181 isoform 2 [Homo sapiens] 37 0.031
>gi|47106061 KRAB-A domain containing 2 [Homo sapiens]
Length = 492
Score = 995 bits (2572), Expect = 0.0
Identities = 492/492 (100%), Positives = 492/492 (100%)
Query: 1 MPSFLVPSLVSSPVLLKLLFSPGPKTIWSLWQQPMLFQEATAFENMTKDWNYLEGSQKDC 60
MPSFLVPSLVSSPVLLKLLFSPGPKTIWSLWQQPMLFQEATAFENMTKDWNYLEGSQKDC
Sbjct: 1 MPSFLVPSLVSSPVLLKLLFSPGPKTIWSLWQQPMLFQEATAFENMTKDWNYLEGSQKDC 60
Query: 61 YRDTMLDSYENTVPQGSFLQLSMMPQRAGNDPPGVSNASEMEMEISNMREKFLMSVTKLV 120
YRDTMLDSYENTVPQGSFLQLSMMPQRAGNDPPGVSNASEMEMEISNMREKFLMSVTKLV
Sbjct: 61 YRDTMLDSYENTVPQGSFLQLSMMPQRAGNDPPGVSNASEMEMEISNMREKFLMSVTKLV 120
Query: 121 ESKSYNSKVFSKEKYFQTIKEVKEAKEKGKKSSRDYRRAAKYDVISVQGTEKLIEATHGE 180
ESKSYNSKVFSKEKYFQTIKEVKEAKEKGKKSSRDYRRAAKYDVISVQGTEKLIEATHGE
Sbjct: 121 ESKSYNSKVFSKEKYFQTIKEVKEAKEKGKKSSRDYRRAAKYDVISVQGTEKLIEATHGE 180
Query: 181 RDRIRYYVHKEELFDILHDTHLSIGHGGRTRMLKELQGKYGNVTKEVIVLYLTLCKQCHQ 240
RDRIRYYVHKEELFDILHDTHLSIGHGGRTRMLKELQGKYGNVTKEVIVLYLTLCKQCHQ
Sbjct: 181 RDRIRYYVHKEELFDILHDTHLSIGHGGRTRMLKELQGKYGNVTKEVIVLYLTLCKQCHQ 240
Query: 241 KNPVPKRGLAPKPMTFKDIDSTCQVEILDMQSSADGEFKFILYYQDHSTKFIILRPLRTK 300
KNPVPKRGLAPKPMTFKDIDSTCQVEILDMQSSADGEFKFILYYQDHSTKFIILRPLRTK
Sbjct: 241 KNPVPKRGLAPKPMTFKDIDSTCQVEILDMQSSADGEFKFILYYQDHSTKFIILRPLRTK 300
Query: 301 QAHEVVSVLLDIFTILGTPSVLDSDSGVEFTNQVVHELNELWPDLKIVSGKYHPGQSQGS 360
QAHEVVSVLLDIFTILGTPSVLDSDSGVEFTNQVVHELNELWPDLKIVSGKYHPGQSQGS
Sbjct: 301 QAHEVVSVLLDIFTILGTPSVLDSDSGVEFTNQVVHELNELWPDLKIVSGKYHPGQSQGS 360
Query: 361 LEGASRDVKNMISTWMQSNHSCHWAKGLRFMQMVRNQAFDVSLQQSPFEAMFGYKAKFGL 420
LEGASRDVKNMISTWMQSNHSCHWAKGLRFMQMVRNQAFDVSLQQSPFEAMFGYKAKFGL
Sbjct: 361 LEGASRDVKNMISTWMQSNHSCHWAKGLRFMQMVRNQAFDVSLQQSPFEAMFGYKAKFGL 420
Query: 421 YSSNLPRETVATLQTEEELEIAEEQLENSLWIRQEERAEIGADRSDMDDDMDPTPEASEP 480
YSSNLPRETVATLQTEEELEIAEEQLENSLWIRQEERAEIGADRSDMDDDMDPTPEASEP
Sbjct: 421 YSSNLPRETVATLQTEEELEIAEEQLENSLWIRQEERAEIGADRSDMDDDMDPTPEASEP 480
Query: 481 STSQGTSGLLCW 492
STSQGTSGLLCW
Sbjct: 481 STSQGTSGLLCW 492
>gi|46195755 SCAN domain containing 3 [Homo sapiens]
Length = 1325
Score = 439 bits (1129), Expect = e-123
Identities = 226/406 (55%), Positives = 293/406 (72%), Gaps = 3/406 (0%)
Query: 76 GSFLQLSMMPQRAGNDPPGVSNASEMEMEISNMREKFLMSVTKLVESKSYNSKVFSKEKY 135
GSFL SMM Q G D + +E E+E NMREKF S+ +L+E+KS N+K+FSK KY
Sbjct: 190 GSFLWFSMMSQSMGGDNLSSLDTNEAEIEPENMREKFFRSLARLLENKSNNTKIFSKAKY 249
Query: 136 FQTIKEVKEAKEKGKKSSRDYRRAAKYDVISVQGTEKLIEATHGERDRIRYYVHKEELFD 195
Q IKEVKEAK K KK S DYRR A++DVI VQG EKLIEA +GE D+IRYY+H E+LFD
Sbjct: 250 CQLIKEVKEAKAKAKKESVDYRRLARFDVILVQGNEKLIEAVNGETDKIRYYLHSEDLFD 309
Query: 196 ILHDTHLSIGHGGRTRMLKELQGKYGNVTKEVIVLYLTLCKQCHQKNPVPKRGLAPKPMT 255
ILH+THLSIGHGGRTRM KELQ KY N+TKEVI+LYLTLCK C QKN K+ L K +
Sbjct: 310 ILHNTHLSIGHGGRTRMEKELQAKYKNITKEVIMLYLTLCKPCQQKNSKLKKVLTSK--S 367
Query: 256 FKDIDSTCQVEILDMQSSADGEFKFILYYQDHSTKFIILRPLRTKQAHEVVSVLLDIFTI 315
K++ S CQV+++DMQ + DGE++FIL+YQD TK LR L++K+ EV LLDIFTI
Sbjct: 368 IKEVSSRCQVDLIDMQLNPDGEYRFILHYQDLCTKLTFLRSLKSKRPTEVAHALLDIFTI 427
Query: 316 LGTPSVLDSDSGVEFTNQVVHELNELWPDLKIVSGKYHPGQSQGSLEGASRDVKNMISTW 375
+G PSVL SD+G EF++QVV EL+ +WP+LKIV GK QSQ S E + D++ I +W
Sbjct: 428 IGAPSVLQSDNGREFSSQVVSELSNIWPELKIVHGKSQTCQSQSSAE-QTEDIRKRIFSW 486
Query: 376 MQSNHSCHWAKGLRFMQMVRNQAFDVSLQQSPFEAMFGYKAKFGLYSSNLPRETVATLQT 435
MQ+N+S HW + L F+QM +NQ + S+QQ+P E+ F +AK GL S L E VA+L T
Sbjct: 487 MQTNNSSHWTEFLWFIQMSQNQPYHRSMQQTPCESAFSSEAKLGLSHSQLTEELVASLHT 546
Query: 436 EEELEIAEEQLENSLWIRQEERAEIGADRSDMDDDMDPTPEASEPS 481
E EL+ A+++LEN+L + EE E G D SD+++++ TP+ +E S
Sbjct: 547 ENELDQADKELENTLRAQYEENIETGTDSSDIEENLSVTPKVAEKS 592
>gi|116812606 zinc finger, H2C2 domain containing [Homo sapiens]
Length = 522
Score = 52.4 bits (124), Expect = 9e-07
Identities = 66/263 (25%), Positives = 110/263 (41%), Gaps = 17/263 (6%)
Query: 157 RRAAKYDVISVQGTEKLIEATHGERDRIRYYVHKEELFDILHDTHL--SIGHGGRTRMLK 214
RRAAK V +KL + V +EE +L + H S H G +R L
Sbjct: 37 RRAAKKFVFK---EKKLFYVGKDRKQNRLVIVSEEEKKKVLRECHENDSGAHHGISRTLT 93
Query: 215 ELQGKY--GNVTKEVIVLYLTLCKQCH-QKNPVPKRGLAPKPMTFKDID--STCQVEILD 269
++ Y +VT +V ++ C+ C KN V +APK K + S V+++
Sbjct: 94 LVESNYYWTSVTNDV-KQWVYACQHCQVAKNTVI---VAPKQHLLKVENPWSLVTVDLMG 149
Query: 270 MQSSADGEFKFILYYQDHSTKFIILRPLRTKQAHEVVSVLLDIFTILGTPSVLDSDSGVE 329
+++ + + D TK+I++ PL A EV +++IF + G P + D E
Sbjct: 150 PFHTSNRSHVYAIIMTDLFTKWIVILPLCDVSASEVSKAIINIFFLYGPPQKIIMDQRDE 209
Query: 330 FTNQVVHELNELWPDLKIVSGKYHPGQSQGSLEGASRDVKNMISTWMQSNHSCHWAKGLR 389
F Q+ EL L+ +IV H + E +K +S ++H +W L
Sbjct: 210 FIQQINIELYRLFGIKQIVIS--HTSGTVNPTESTPNTIKAFLSKHC-ADHPNNWDDHLS 266
Query: 390 FMQMVRNQAFDVSLQQSPFEAMF 412
+ N + +P+ MF
Sbjct: 267 AVSFAFNVTHLEPTKNTPYFQMF 289
>gi|145701019 zinc finger protein 655 isoform b [Homo sapiens]
Length = 181
Score = 43.1 bits (100), Expect = 6e-04
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 37 FQEATAFENMT-----KDWNYLEGSQKDCYRDTMLDSYENTVPQGSFLQLSMMPQRAGND 91
+QE FE++ ++W YL+ Q+D YR+ ML++Y N V G L+L + N
Sbjct: 73 YQEFVTFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSLGILLRLPTTRIHSVNS 132
Query: 92 PPGVSN 97
P +S+
Sbjct: 133 CPALSH 138
>gi|13129036 zinc finger protein 655 isoform b [Homo sapiens]
Length = 181
Score = 43.1 bits (100), Expect = 6e-04
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 37 FQEATAFENMT-----KDWNYLEGSQKDCYRDTMLDSYENTVPQGSFLQLSMMPQRAGND 91
+QE FE++ ++W YL+ Q+D YR+ ML++Y N V G L+L + N
Sbjct: 73 YQEFVTFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSLGILLRLPTTRIHSVNS 132
Query: 92 PPGVSN 97
P +S+
Sbjct: 133 CPALSH 138
>gi|110349778 zinc finger protein 273 [Homo sapiens]
Length = 569
Score = 41.2 bits (95), Expect = 0.002
Identities = 60/257 (23%), Positives = 98/257 (38%), Gaps = 50/257 (19%)
Query: 7 PSLVSSPVLLKLLFSPGPKTIWSLWQQPMLFQEATAFENMTKDWNYLEGSQKDCYRDTML 66
PS+ P + + P SL P+ F++ A E ++W L+ SQ++ YR+ ML
Sbjct: 9 PSVAPLPAGIGRSTAKTPGLPGSLEMGPLTFRDV-AIEFSLEEWQCLDTSQQNLYRNVML 67
Query: 67 DSYENTVPQGSFLQLSMMPQRAGNDPPGVSNASEMEMEISNMREKFLMSVTKLVESKSYN 126
D+Y N V FL +++ P + E E NM+ +++ +V S +
Sbjct: 68 DNYRNLV----FLGIAV-------SKPDLITCLEQGKEPCNMKRHAMVAKPPVVCS-HFA 115
Query: 127 SKVFSKEKYFQTIKEVKEAKEKGKKSSRDYRRAAKYDVISVQGTEKLIEATHGERDRIRY 186
++ K+ + ++V RR KY G E L + G + +
Sbjct: 116 QDLWPKQGLKDSFQKV------------ILRRYGKY------GHENL-QLRKGCKSADEH 156
Query: 187 YVHKEELFDILHDTHLSIGHGGRTRMLKELQGKYGNVTKEVIVLYLTLCKQCHQKNPVPK 246
VHK G+ G + L Q K K V VL+ H+K K
Sbjct: 157 KVHKR-------------GYNGLNQCLTTTQSKIFQCDKYVKVLHKFSNSNIHKKRQTGK 203
Query: 247 RGLAPKPMTFKDIDSTC 263
KP K+ +C
Sbjct: 204 -----KPFKCKECGKSC 215
>gi|28274686 zinc finger protein 82 homolog [Homo sapiens]
Length = 532
Score = 40.8 bits (94), Expect = 0.003
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 48 KDWNYLEGSQKDCYRDTMLDSYENTVPQGSFL 79
++W YL+ QKD YRD ML++Y N V G F+
Sbjct: 18 EEWEYLDLEQKDLYRDVMLENYSNLVSLGCFI 49
>gi|239753095 PREDICTED: similar to hCG1725380 [Homo sapiens]
Length = 583
Score = 40.4 bits (93), Expect = 0.004
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 31 WQQPMLFQEATAFENMTKDWNYLEGSQKDCYRDTMLDSYENTVPQG 76
+Q+ +L A E ++W+YL+ +Q++ YRD ML++Y N V G
Sbjct: 160 YQKGLLIFRDVAIEFSPEEWSYLDPAQQNLYRDVMLENYRNLVSLG 205
>gi|239747658 PREDICTED: similar to hCG1725380 [Homo sapiens]
Length = 583
Score = 40.4 bits (93), Expect = 0.004
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 31 WQQPMLFQEATAFENMTKDWNYLEGSQKDCYRDTMLDSYENTVPQG 76
+Q+ +L A E ++W+YL+ +Q++ YRD ML++Y N V G
Sbjct: 160 YQKGLLIFRDVAIEFSPEEWSYLDPAQQNLYRDVMLENYRNLVSLG 205
>gi|239741529 PREDICTED: similar to hCG1725380 [Homo sapiens]
Length = 583
Score = 40.4 bits (93), Expect = 0.004
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 31 WQQPMLFQEATAFENMTKDWNYLEGSQKDCYRDTMLDSYENTVPQG 76
+Q+ +L A E ++W+YL+ +Q++ YRD ML++Y N V G
Sbjct: 160 YQKGLLIFRDVAIEFSPEEWSYLDPAQQNLYRDVMLENYRNLVSLG 205
>gi|61676102 zinc finger protein 789 isoform 1 [Homo sapiens]
Length = 425
Score = 39.7 bits (91), Expect = 0.006
Identities = 37/150 (24%), Positives = 61/150 (40%), Gaps = 28/150 (18%)
Query: 34 PMLFQEATAFENMT-----KDWNYLEGSQKDCYRDTMLDSYENTVPQGSFLQLSMMPQRA 88
P +E +FE++ ++W +L QKD YRD ML++Y N V G P+
Sbjct: 4 PARGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLLG-----FQFPK-- 56
Query: 89 GNDPPGVSNASEMEMEISNMREKFLMSVTKLVESKSYNSKVFSKEKYFQTIKEVKEAKEK 148
EM ++ N E++++ + + K+ S E + K K+K
Sbjct: 57 ----------PEMICQLENWDEQWILDLPRTGNRKASGSACPGSEARHKMKK--LTPKQK 104
Query: 149 GKKSSRDYRRAAKYDVISVQGTEKLIEATH 178
+ Y K V+ + EKL E H
Sbjct: 105 FSEDLESY----KISVVMQESAEKLSEKLH 130
>gi|116875829 zinc finger protein 20 [Homo sapiens]
Length = 532
Score = 39.3 bits (90), Expect = 0.008
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 22/94 (23%)
Query: 35 MLFQEATAFENMT-----KDWNYLEGSQKDCYRDTMLDSYENTVPQGSFLQLSMMPQRAG 89
M+FQ++ AFE++ ++W L+ SQK+ YRD M ++++N G ++
Sbjct: 1 MMFQDSVAFEDVAVSFTQEEWALLDPSQKNLYRDVMQETFKNLTSVGKTWKV-------- 52
Query: 90 NDPPGVSNASEMEMEISNMREKFLMSVTKLVESK 123
+E E N R + KL ESK
Sbjct: 53 ---------QNIEDEYKNPRRNLSLMREKLCESK 77
>gi|134254457 zinc finger protein 665 [Homo sapiens]
Length = 678
Score = 39.3 bits (90), Expect = 0.008
Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 9/132 (6%)
Query: 33 QPMLFQEATAFENMTKDWNYLEGSQKDCYRDTMLDSYENTVPQGSFLQLSMMPQRAGNDP 92
Q L + A E ++W L+ +QK YRD ML++Y N V L +S P
Sbjct: 5 QGQLTFKDVAIEFSQEEWTCLDPAQKTLYRDVMLENYRNLVS----LDISCKCVNTDLPP 60
Query: 93 PGVSNASEMEMEISNMREKFLMSVTKLVESKSYNSKVF-----SKEKYFQTIKEVKEAKE 147
G +N E + R + +V + N+ F E ++T+ +++
Sbjct: 61 KGKNNMGEAFYTVKLERLESCDTVGLSFQEVQKNTYDFECQWKDDEGNYKTVLMLQKENL 120
Query: 148 KGKKSSRDYRRA 159
G+++ RD R A
Sbjct: 121 PGRRAQRDRRAA 132
>gi|153792259 zinc finger protein 778 [Homo sapiens]
Length = 729
Score = 39.3 bits (90), Expect = 0.008
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Query: 37 FQEATAFENMTKD-----WNYLEGSQKDCYRDTMLDSYEN 71
+Q+A F+++ D W L+ SQ+D YRD ML++YEN
Sbjct: 38 YQDAVTFDDVAVDFTQEEWTLLDPSQRDLYRDVMLENYEN 77
>gi|21362078 zinc finger protein 649 [Homo sapiens]
Length = 505
Score = 38.9 bits (89), Expect = 0.011
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 33 QPMLFQEATAFENMTKDWNYLEGSQKDCYRDTMLDSYENTVPQG 76
Q L E A + ++W +L +QKD YRD ML++Y N V G
Sbjct: 5 QESLTLEDVAVDFTWEEWQFLSPAQKDLYRDVMLENYSNLVSVG 48
>gi|47271376 zinc finger protein 615 [Homo sapiens]
Length = 731
Score = 38.9 bits (89), Expect = 0.011
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 33 QPMLFQEATAFENMTKDWNYLEGSQKDCYRDTMLDSYENTVPQG 76
Q L E A + ++W +L +QKD YRD ML++Y N V G
Sbjct: 5 QESLTLEDVAVDFTWEEWQFLSPAQKDLYRDVMLENYSNLVAVG 48
>gi|22095393 zinc finger protein 420 [Homo sapiens]
Length = 688
Score = 38.5 bits (88), Expect = 0.014
Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 22/128 (17%)
Query: 42 AFENMTKDWNYLEGSQKDCYRDTMLDSYENTVPQGSFLQLSMMPQRAGNDPPGVSNASEM 101
A + ++W L+ +Q+D YRD ML++Y N V L + + A D N E
Sbjct: 12 AIDFSQEEWECLDSAQRDLYRDVMLENYSNLV------SLDLPSRCASKDLSPEKNTYET 65
Query: 102 EMEISNMREKFLMSVTKLVESKSYNSKVFSKEKYFQTIKEVKEAKEKGKKSSRDYRRAAK 161
E+ M ++ + L ES S + E K EK +++ ++Y R
Sbjct: 66 ELSQWEMSDR--LENCDLEESNS------------RDYLEAKGKMEKQQENQKEYFRQGM 111
Query: 162 --YDVISV 167
YD +S+
Sbjct: 112 IIYDKMSI 119
>gi|156627557 zinc finger protein 554 [Homo sapiens]
Length = 538
Score = 38.5 bits (88), Expect = 0.014
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 31 WQQPMLFQEATAFENMTKDWNYLEGSQKDCYRDTMLDSYENTV 73
W Q ++ E + + ++W LE +QK+ YR+ ML++Y N V
Sbjct: 40 WSQELVTFEDVSMDFSQEEWELLEPAQKNLYREVMLENYRNVV 82
>gi|223890215 zinc finger protein 566 isoform 1 [Homo sapiens]
Length = 418
Score = 38.1 bits (87), Expect = 0.018
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 16/116 (13%)
Query: 38 QEATAFENMTKD-----WNYLEGSQKDCYRDTMLDSYENTVPQGSFLQLSMMPQRAGNDP 92
QE+ F +++ D W L Q+D YRD ML++Y N V G +
Sbjct: 3 QESVMFSDVSVDFSQEEWECLNDDQRDLYRDVMLENYSNLVSMGHSI-----------SK 51
Query: 93 PGVSNASEMEMEISNMREKFLMSVTKLVESKSYNSKVFSKEKYFQTIKEVKEAKEK 148
P V + E E + ++ES+ K+F K++ ++ E EK
Sbjct: 52 PNVISYLEQGKEPWLADRELTRGQWPVLESRCETKKLFLKKEIYEIESTQWEIMEK 107
>gi|14523054 zinc finger protein 566 isoform 1 [Homo sapiens]
Length = 418
Score = 38.1 bits (87), Expect = 0.018
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 16/116 (13%)
Query: 38 QEATAFENMTKD-----WNYLEGSQKDCYRDTMLDSYENTVPQGSFLQLSMMPQRAGNDP 92
QE+ F +++ D W L Q+D YRD ML++Y N V G +
Sbjct: 3 QESVMFSDVSVDFSQEEWECLNDDQRDLYRDVMLENYSNLVSMGHSI-----------SK 51
Query: 93 PGVSNASEMEMEISNMREKFLMSVTKLVESKSYNSKVFSKEKYFQTIKEVKEAKEK 148
P V + E E + ++ES+ K+F K++ ++ E EK
Sbjct: 52 PNVISYLEQGKEPWLADRELTRGQWPVLESRCETKKLFLKKEIYEIESTQWEIMEK 107
>gi|223890212 zinc finger protein 566 isoform 1 [Homo sapiens]
Length = 418
Score = 38.1 bits (87), Expect = 0.018
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 16/116 (13%)
Query: 38 QEATAFENMTKD-----WNYLEGSQKDCYRDTMLDSYENTVPQGSFLQLSMMPQRAGNDP 92
QE+ F +++ D W L Q+D YRD ML++Y N V G +
Sbjct: 3 QESVMFSDVSVDFSQEEWECLNDDQRDLYRDVMLENYSNLVSMGHSI-----------SK 51
Query: 93 PGVSNASEMEMEISNMREKFLMSVTKLVESKSYNSKVFSKEKYFQTIKEVKEAKEK 148
P V + E E + ++ES+ K+F K++ ++ E EK
Sbjct: 52 PNVISYLEQGKEPWLADRELTRGQWPVLESRCETKKLFLKKEIYEIESTQWEIMEK 107
>gi|28274682 zinc finger protein 33A isoform b [Homo sapiens]
Length = 810
Score = 38.1 bits (87), Expect = 0.018
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 5/44 (11%)
Query: 38 QEATAFENMT-----KDWNYLEGSQKDCYRDTMLDSYENTVPQG 76
QE+ +F+++T ++W +L+ SQ+ YRD ML++Y N V G
Sbjct: 9 QESVSFKDVTVGFTQEEWQHLDPSQRALYRDVMLENYSNLVSVG 52
>gi|154759253 zinc finger protein 404 [Homo sapiens]
Length = 552
Score = 38.1 bits (87), Expect = 0.018
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 34 PMLFQEATAFENMTKDWNYLEGSQKDCYRDTMLDSYENTV 73
P+ F + A + ++W YL Q+D YRD ML++Y N V
Sbjct: 5 PLTFSDV-AIDFSQEEWEYLNSDQRDLYRDVMLENYTNLV 43
>gi|110347446 zinc finger protein 33A isoform a [Homo sapiens]
Length = 811
Score = 38.1 bits (87), Expect = 0.018
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 5/44 (11%)
Query: 38 QEATAFENMT-----KDWNYLEGSQKDCYRDTMLDSYENTVPQG 76
QE+ +F+++T ++W +L+ SQ+ YRD ML++Y N V G
Sbjct: 9 QESVSFKDVTVGFTQEEWQHLDPSQRALYRDVMLENYSNLVSVG 52
>gi|239757205 PREDICTED: zinc finger protein 66 [Homo sapiens]
Length = 733
Score = 37.7 bits (86), Expect = 0.024
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 21 SPGPKTIWSLWQQPMLFQEATAFENMTKDWNYLEGSQKDCYRDTMLDSYENTV 73
+PGP SL P+ F++ A E ++W+ L+ +Q++ YRD ML++Y N V
Sbjct: 83 TPGPPG--SLEMGPLQFRDV-AIEFSLEEWHCLDMAQRNLYRDVMLENYRNLV 132
>gi|239751712 PREDICTED: zinc finger protein 66 [Homo sapiens]
Length = 920
Score = 37.7 bits (86), Expect = 0.024
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 21 SPGPKTIWSLWQQPMLFQEATAFENMTKDWNYLEGSQKDCYRDTMLDSYENTV 73
+PGP SL P+ F++ A E ++W+ L+ +Q++ YRD ML++Y N V
Sbjct: 83 TPGPPG--SLEMGPLQFRDV-AIEFSLEEWHCLDMAQRNLYRDVMLENYRNLV 132
>gi|239746217 PREDICTED: zinc finger protein 66 [Homo sapiens]
Length = 1114
Score = 37.7 bits (86), Expect = 0.024
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 21 SPGPKTIWSLWQQPMLFQEATAFENMTKDWNYLEGSQKDCYRDTMLDSYENTV 73
+PGP SL P+ F++ A E ++W+ L+ +Q++ YRD ML++Y N V
Sbjct: 83 TPGPPG--SLEMGPLQFRDV-AIEFSLEEWHCLDMAQRNLYRDVMLENYRNLV 132
>gi|24307875 zinc finger protein 33B [Homo sapiens]
Length = 778
Score = 37.7 bits (86), Expect = 0.024
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 5/45 (11%)
Query: 37 FQEATAFENMT-----KDWNYLEGSQKDCYRDTMLDSYENTVPQG 76
FQ + +F+++T ++W +L+ SQ+ YRD ML++Y N V G
Sbjct: 8 FQGSVSFKDVTVGFTQEEWQHLDPSQRALYRDVMLENYSNLVSVG 52
>gi|72534736 zinc finger protein 613 isoform 1 [Homo sapiens]
Length = 617
Score = 37.7 bits (86), Expect = 0.024
Identities = 19/44 (43%), Positives = 24/44 (54%)
Query: 33 QPMLFQEATAFENMTKDWNYLEGSQKDCYRDTMLDSYENTVPQG 76
Q L E A E ++W L +QKD YRD ML++Y N V G
Sbjct: 5 QESLTLEDVAVEFTWEEWQLLGPAQKDLYRDVMLENYSNLVSVG 48
>gi|224586807 zinc finger protein 181 isoform 2 [Homo sapiens]
Length = 570
Score = 37.4 bits (85), Expect = 0.031
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 16/148 (10%)
Query: 34 PMLFQEATAFENMTKDWNYLEGSQKDCYRDTMLDSYENTVPQGSFLQLSMMPQRAGNDPP 93
P + A + ++W +L +Q+D Y+D M+ +YEN V G LS+ P
Sbjct: 2 PQVTFNDVAIDFTHEEWGWLSSAQRDLYKDVMVQNYENLVSVG----LSV-------TKP 50
Query: 94 GVSNASEMEMEISNMREKFLMSVTKLVESKSYNSKVFSKEKYFQTIKEVKEAKEKGKKSS 153
V E E M +K + ES+ N ++ +K+ + EK K S
Sbjct: 51 YVITLLEDGKEPWMMEKKLSKGMIPDWESRWENKELSTKKDNYDEDSPQTVIIEKVVKQS 110
Query: 154 RDYRRAAKYDVISVQGTEKLIEATHGER 181
++ + K +++ EKL E HG +
Sbjct: 111 YEFSNSKK----NLEYIEKL-EGKHGSQ 133
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,056,870
Number of Sequences: 37866
Number of extensions: 866430
Number of successful extensions: 3640
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 269
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 3330
Number of HSP's gapped (non-prelim): 391
length of query: 492
length of database: 18,247,518
effective HSP length: 106
effective length of query: 386
effective length of database: 14,233,722
effective search space: 5494216692
effective search space used: 5494216692
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.