Guide to the Human Genome
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Name: KRBA2 Sequence: fasta or formatted (492aa) NCBI GI: 47106061
Description:

KRAB-A domain containing 2

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         21           2
 C cysteine            1.2          6           1
 D aspartate           5.5         27           3
 E glutamate           8.3         41           3
 F phenylalanine       4.1         20           1
 G glycine             5.5         27           2
 H histidine           2.4         12           1
 I isoleucine          4.3         21           2
 K lysine              7.3         36           2
 L leucine             9.3         46           2
 M methionine          4.1         20           2
 N asparagine          3.3         16           1
 P proline             4.7         23           2
 Q glutamine           5.7         28           2
 R arginine            4.3         21           2
 S serine              9.6         47           2
 T threonine           5.5         27           1
 V valine              5.9         29           2
 W tryptophan          1.6          8           1
 Y tyrosine            3.3         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   KRAB-A domain containing 2 
SCAND3                0.427   SCAN domain containing 3 
GIN1                  0.028   zinc finger, H2C2 domain containing 
ZNF655                0.019   zinc finger protein 655 isoform b 
ZNF655                0.019   zinc finger protein 655 isoform b 
ZNF273                0.016   zinc finger protein 273 
ZFP82                 0.016   zinc finger protein 82 homolog 
LOC729806             0.015   PREDICTED: similar to hCG1725380 
LOC729806             0.015   PREDICTED: similar to hCG1725380 
LOC729806             0.015   PREDICTED: similar to hCG1725380 
ZNF789                0.015   zinc finger protein 789 isoform 1 
ZNF20                 0.014   zinc finger protein 20 
ZNF665                0.014   zinc finger protein 665 
ZNF778                0.014   zinc finger protein 778 
ZNF649                0.014   zinc finger protein 649 
ZNF615                0.014   zinc finger protein 615 
ZNF420                0.014   zinc finger protein 420 
ZNF554                0.014   zinc finger protein 554 
ZNF566                0.013   zinc finger protein 566 isoform 1 
ZNF566                0.013   zinc finger protein 566 isoform 1 
ZNF566                0.013   zinc finger protein 566 isoform 1 
ZNF33A                0.013   zinc finger protein 33A isoform b 
ZNF404                0.013   zinc finger protein 404 
ZNF33A                0.013   zinc finger protein 33A isoform a 
ZNF66                 0.013   PREDICTED: zinc finger protein 66 
ZNF66                 0.013   PREDICTED: zinc finger protein 66 
ZNF66                 0.013   PREDICTED: zinc finger protein 66 
ZNF33B                0.013   zinc finger protein 33B 
ZNF613                0.013   zinc finger protein 613 isoform 1 
ZNF181                0.012   zinc finger protein 181 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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