Guide to the Human Genome
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Search of human proteins with 46877066

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|46877066 plasticity related gene 3 [Homo sapiens]
         (325 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|46877066 plasticity related gene 3 [Homo sapiens]                  659   0.0  
gi|46877064 plasticity related gene 3 [Homo sapiens]                  659   0.0  
gi|82659094 phosphatidic acid phosphatase type 2d isoform 1 [Hom...   379   e-105
gi|61102719 phosphatidic acid phosphatase type 2d isoform 2 [Hom...   375   e-104
gi|12232395 lipid phosphate phosphatase-related protein type 2 [...   294   8e-80
gi|33636722 plasticity related gene 1 [Homo sapiens]                  206   2e-53
gi|13376339 plasticity-related protein 2 [Homo sapiens]               175   4e-44
gi|29171740 phosphatidic acid phosphatase type 2B [Homo sapiens]      132   3e-31
gi|29171742 phosphatidic acid phosphatase type 2B [Homo sapiens]      132   3e-31
gi|29171738 phosphatidic acid phosphatase type 2A isoform 2 [Hom...   117   2e-26
gi|29171736 phosphatidic acid phosphatase type 2A isoform 1 [Hom...   107   2e-23
gi|4505977 phosphatidic acid phosphatase type 2C isoform 1 [Homo...    92   6e-19
gi|29171747 phosphatidic acid phosphatase type 2C isoform 3 [Hom...    92   6e-19
gi|29171745 phosphatidic acid phosphatase type 2C isoform 2 [Hom...    89   7e-18
gi|156523237 phosphatidic acid phosphatase type 2 domain contain...    59   4e-09
gi|73611920 phosphatidic acid phosphatase type 2 domain containi...    53   4e-07
gi|156523235 phosphatidic acid phosphatase type 2 domain contain...    50   4e-06
gi|156523239 phosphatidic acid phosphatase type 2 domain contain...    40   0.003
gi|223029457 phosphatidic acid phosphatase type 2 domain contain...    33   0.26 
gi|171184408 solute carrier family 6 (neurotransmitter transport...    33   0.35 
gi|171184406 solute carrier family 6 (neurotransmitter transport...    33   0.35 
gi|171184404 solute carrier family 6 (neurotransmitter transport...    33   0.35 
gi|66773040 phosphatidic acid phosphatase type 2 domain containi...    31   1.3  
gi|21361581 solute carrier family 6 (neurotransmitter transporte...    31   1.7  
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo...    31   1.7  
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo...    31   1.7  
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo...    31   1.7  
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [...    31   1.7  
gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo ...    31   1.7  
gi|239754660 PREDICTED: hypothetical protein [Homo sapiens]            30   3.8  

>gi|46877066 plasticity related gene 3 [Homo sapiens]
          Length = 325

 Score =  659 bits (1701), Expect = 0.0
 Identities = 325/325 (100%), Positives = 325/325 (100%)

Query: 1   MAVGNNTQRSYSIIPCFIFVELVIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPYP 60
           MAVGNNTQRSYSIIPCFIFVELVIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPYP
Sbjct: 1   MAVGNNTQRSYSIIPCFIFVELVIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPYP 60

Query: 61  GTEEESFITPLVLYCVLAATPTAIIFIGEISMYFIKSTRESLIAQEKTILTGECCYLNPL 120
           GTEEESFITPLVLYCVLAATPTAIIFIGEISMYFIKSTRESLIAQEKTILTGECCYLNPL
Sbjct: 61  GTEEESFITPLVLYCVLAATPTAIIFIGEISMYFIKSTRESLIAQEKTILTGECCYLNPL 120

Query: 121 LRRIIRFTGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINNGN 180
           LRRIIRFTGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINNGN
Sbjct: 121 LRRIIRFTGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINNGN 180

Query: 181 ICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCTAF 240
           ICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCTAF
Sbjct: 181 ICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCTAF 240

Query: 241 LTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVPLM 300
           LTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVPLM
Sbjct: 241 LTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVPLM 300

Query: 301 AFPRIESPLETLSAQNHSASMTEVT 325
           AFPRIESPLETLSAQNHSASMTEVT
Sbjct: 301 AFPRIESPLETLSAQNHSASMTEVT 325


>gi|46877064 plasticity related gene 3 [Homo sapiens]
          Length = 325

 Score =  659 bits (1701), Expect = 0.0
 Identities = 325/325 (100%), Positives = 325/325 (100%)

Query: 1   MAVGNNTQRSYSIIPCFIFVELVIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPYP 60
           MAVGNNTQRSYSIIPCFIFVELVIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPYP
Sbjct: 1   MAVGNNTQRSYSIIPCFIFVELVIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPYP 60

Query: 61  GTEEESFITPLVLYCVLAATPTAIIFIGEISMYFIKSTRESLIAQEKTILTGECCYLNPL 120
           GTEEESFITPLVLYCVLAATPTAIIFIGEISMYFIKSTRESLIAQEKTILTGECCYLNPL
Sbjct: 61  GTEEESFITPLVLYCVLAATPTAIIFIGEISMYFIKSTRESLIAQEKTILTGECCYLNPL 120

Query: 121 LRRIIRFTGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINNGN 180
           LRRIIRFTGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINNGN
Sbjct: 121 LRRIIRFTGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINNGN 180

Query: 181 ICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCTAF 240
           ICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCTAF
Sbjct: 181 ICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCTAF 240

Query: 241 LTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVPLM 300
           LTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVPLM
Sbjct: 241 LTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVPLM 300

Query: 301 AFPRIESPLETLSAQNHSASMTEVT 325
           AFPRIESPLETLSAQNHSASMTEVT
Sbjct: 301 AFPRIESPLETLSAQNHSASMTEVT 325


>gi|82659094 phosphatidic acid phosphatase type 2d isoform 1 [Homo
           sapiens]
          Length = 321

 Score =  379 bits (973), Expect = e-105
 Identities = 176/309 (56%), Positives = 236/309 (76%), Gaps = 1/309 (0%)

Query: 18  IFVELVIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPYPGTEEESFITPLVLYCVL 77
           ++ ++VIMAGTV+LAYYFE TDTF V++QGFFC D    KPYPG E+ S + P++LY + 
Sbjct: 13  LYFQMVIMAGTVMLAYYFEYTDTFTVNVQGFFCHDSAYRKPYPGPEDSSAVPPVLLYSLA 72

Query: 78  AATPTAIIFIGEISMYFIKSTRESLIAQEKTILTGECCYLNPLLRRIIRFTGVFAFGLFA 137
           A  P  +I +GE +++ ++        QEKTILTG+CCY+NPL+RR +RF G++ FGLFA
Sbjct: 73  AGVPVLVIIVGETAVFCLQLATRDFENQEKTILTGDCCYINPLVRRTVRFLGIYTFGLFA 132

Query: 138 TDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINNGNICTGDLEVIEKARRSFP 197
           TDIFVNAGQVVTG+L P+FL +CKPNYT+  CQ + QFI+    CTG+ ++I +AR++FP
Sbjct: 133 TDIFVNAGQVVTGNLAPHFLALCKPNYTALGCQQYTQFISGEEACTGNPDLIMRARKTFP 192

Query: 198 SKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDV 257
           SK AALS+Y+A+Y TMYIT+TIK K +RLAKPVLCLG +C AFLTGLNRV+EYRNH SDV
Sbjct: 193 SKEAALSVYAAMYLTMYITNTIKAKGTRLAKPVLCLGLMCLAFLTGLNRVAEYRNHWSDV 252

Query: 258 IAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVPLMAFPRIESPLETL-SAQN 316
           IAGF++G ++A+FL +CVV+NFKG Q        ++   +P+++ PR+ESPLE + S QN
Sbjct: 253 IAGFLVGISIAVFLVVCVVNNFKGRQAENEHIHMDNLAQMPMISIPRVESPLEKVTSVQN 312

Query: 317 HSASMTEVT 325
           H  +  EVT
Sbjct: 313 HITAFAEVT 321


>gi|61102719 phosphatidic acid phosphatase type 2d isoform 2 [Homo
           sapiens]
          Length = 316

 Score =  375 bits (962), Expect = e-104
 Identities = 174/308 (56%), Positives = 234/308 (75%), Gaps = 4/308 (1%)

Query: 18  IFVELVIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPYPGTEEESFITPLVLYCVL 77
           ++ ++VIMAGTV+LAYYFE TDTF V++QGFFC D    KPYPG E+ S + P++LY + 
Sbjct: 13  LYFQMVIMAGTVMLAYYFEYTDTFTVNVQGFFCHDSAYRKPYPGPEDSSAVPPVLLYSLA 72

Query: 78  AATPTAIIFIGEISMYFIKSTRESLIAQEKTILTGECCYLNPLLRRIIRFTGVFAFGLFA 137
           A  P  +I +GE +++ ++        QEKTILTG+CCY+NPL+RR +RF G++ FGLFA
Sbjct: 73  AGVPVLVIIVGETAVFCLQLATRDFENQEKTILTGDCCYINPLVRRTVRFLGIYTFGLFA 132

Query: 138 TDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINNGNICTGDLEVIEKARRSFP 197
           TDIFVNAGQVVTG+L P+FL +CKPNYT+  CQ + QFI+    CTG+ ++I +AR++FP
Sbjct: 133 TDIFVNAGQVVTGNLAPHFLALCKPNYTALGCQQYTQFISGEEACTGNPDLIMRARKTFP 192

Query: 198 SKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDV 257
           SK AALS+Y+A+Y TMYIT+TIK K +RLAKPVLCLG +C AFLTGLNRV+EYRNH SDV
Sbjct: 193 SKEAALSVYAAMYLTMYITNTIKAKGTRLAKPVLCLGLMCLAFLTGLNRVAEYRNHWSDV 252

Query: 258 IAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVPLMAFPRIESPLETLSAQNH 317
           IAGF++G ++A+FL +CVV+NFKG Q        ++   +P+++ PR+ESPLE    +NH
Sbjct: 253 IAGFLVGISIAVFLVVCVVNNFKGRQAENEHIHMDNLAQMPMISIPRVESPLE----KNH 308

Query: 318 SASMTEVT 325
             +  EVT
Sbjct: 309 ITAFAEVT 316


>gi|12232395 lipid phosphate phosphatase-related protein type 2
           [Homo sapiens]
          Length = 343

 Score =  294 bits (752), Expect = 8e-80
 Identities = 147/311 (47%), Positives = 197/311 (63%), Gaps = 12/311 (3%)

Query: 8   QRSYSIIPCFIFVELVIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPYPGTEEESF 67
           +RS+SIIPCF+FVE V++   +LLAY  E TDT  VH QGFFC D    KPYPG E  S 
Sbjct: 9   KRSFSIIPCFVFVESVLLGIVILLAYRLEFTDTLPVHTQGFFCYDSTYAKPYPGPEAASR 68

Query: 68  ITPLVLYCVLAATPTAIIFIGEISMYFIKSTRESL-IAQEKTILTGECCYLNPLLRRIIR 126
           + P ++Y ++ A PT  I +GE++  F  +   ++ +  E TI++G CC  +P +RR++R
Sbjct: 69  VPPALVYALVTAGPTLTILLGELARAFFPAPPSAVPVIGESTIVSGACCRFSPPVRRLVR 128

Query: 127 FTGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADC-------QAHHQFINNG 179
           F GV++FGLF T IF NAGQVVTG+ TP+FL+VC+PNYT+  C           +F+ + 
Sbjct: 129 FLGVYSFGLFTTTIFANAGQVVTGNPTPHFLSVCRPNYTALGCLPPSPDRPGPDRFVTDQ 188

Query: 180 NICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCTA 239
             C G   ++  ARR+FP K AAL  Y+  Y  MY+T   + K SRL KP LCL  LC A
Sbjct: 189 GACAGSPSLVAAARRAFPCKDAALCAYAVTYTAMYVTLVFRVKGSRLVKPSLCLALLCPA 248

Query: 240 FLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVPL 299
           FL G+ RV+EYRNH SDV+AGF+ G A+A FL  CVVHNF+    S  +  P +  G   
Sbjct: 249 FLVGVVRVAEYRNHWSDVLAGFLTGAAIATFLVTCVVHNFQSRPPSGRRLSPWEDLG--- 305

Query: 300 MAFPRIESPLE 310
              P ++SPLE
Sbjct: 306 -QAPTMDSPLE 315


>gi|33636722 plasticity related gene 1 [Homo sapiens]
          Length = 763

 Score =  206 bits (524), Expect = 2e-53
 Identities = 124/318 (38%), Positives = 175/318 (55%), Gaps = 9/318 (2%)

Query: 4   GNNTQRSYSIIPCFIFVELVIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPYPGTE 63
           G   + S +++PCF FVEL I+A +V+  Y+ E TD F+    GF C D  L  PY    
Sbjct: 57  GKVIKDSVTLLPCFYFVELPILASSVVSLYFLELTDVFKPVHSGFSCYDRSLSMPYIEPT 116

Query: 64  EESFITPLVLYCVLAATPTAIIFIGEISMYFIKSTRESLIAQEKTILTGECCYLNPLLRR 123
           +E+ I  L+L  +  A P   I +GE  +Y   S R + +  E  I  G C + N  LRR
Sbjct: 117 QEA-IPFLMLLSLAFAGPAITIMVGEGILYCCLSKRRNGVGLEPNINAGGCNF-NSFLRR 174

Query: 124 IIRFTGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINNGNICT 183
            +RF GV  FGL +T +  +  Q+ TG+  PYFLTVCKPNYTS +           +IC+
Sbjct: 175 AVRFVGVHVFGLCSTALITDIIQLSTGYQAPYFLTVCKPNYTSLNVSCKENSYIVEDICS 234

Query: 184 G-DLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCTAFLT 242
           G DL VI   R+SFPS+HA L+ ++A+Y +MY  ST+ T SS+L KP+L    +    + 
Sbjct: 235 GSDLTVINSGRKSFPSQHATLAAFAAVYVSMYFNSTL-TDSSKLLKPLLVFTFIICGIIC 293

Query: 243 GLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVPLMAF 302
           GL R+++Y+NH  DV  GF++G  +AL+LG+  V NF      PS       R       
Sbjct: 294 GLTRITQYKNHPVDVYCGFLIGGGIALYLGLYAVGNF-----LPSDESMFQHRDALRSLT 348

Query: 303 PRIESPLETLSAQNHSAS 320
              + P   LSA+N S+S
Sbjct: 349 DLNQDPNRLLSAKNGSSS 366


>gi|13376339 plasticity-related protein 2 [Homo sapiens]
          Length = 746

 Score =  175 bits (444), Expect = 4e-44
 Identities = 117/348 (33%), Positives = 173/348 (49%), Gaps = 40/348 (11%)

Query: 10  SYSIIPCFIFVELVIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPYPGTEEESFIT 69
           S +++PCF FVEL I+A +++  Y+ E TD F+    GF C D  L  PY  T EE  + 
Sbjct: 14  SMTLLPCFYFVELPIVASSIVSLYFLELTDLFKPAKVGFQCYDRTLSMPYVETNEE--LI 71

Query: 70  PLVLYCVLA-ATPTAIIFIGEISMYFIKST---RESLIAQEKTILTGECCYLNPLLRRII 125
           PL++   LA A P A I + E  +Y ++S    R    A  +  +    C  N  LRR +
Sbjct: 72  PLLMLLSLAFAAPAASIMVAEGMLYCLQSRLWGRAGGPAGAEGSINAGGCNFNSFLRRTV 131

Query: 126 RFTGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINNGNICTG- 184
           RF GV  FGL AT +  +  Q+ TG+ TP+FLTVCKPNYT              +IC+G 
Sbjct: 132 RFVGVHVFGLCATALVTDVIQLATGYHTPFFLTVCKPNYTLLGTSCEVNPYITQDICSGH 191

Query: 185 DLEVIEKARRSFPSKHAALSIYSALYAT----------------------------MYIT 216
           D+  I  AR++FPS+HA LS ++A+Y +                            MY  
Sbjct: 192 DIHAILSARKTFPSQHATLSAFAAVYVSVSPAPHCPSQALLLTRGEPSLTPTPMPQMYFN 251

Query: 217 STIKTKSSRLAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVV 276
           S I + +++L KP+L       A + GL ++++YR+H  DV AGF++G  +A +L    V
Sbjct: 252 SVI-SDTTKLLKPILVFAFAIAAGVCGLTQITQYRSHPVDVYAGFLIGAGIAAYLACHAV 310

Query: 277 HNFKGTQGSPSKPKPEDPRGVPLMAFPRIESPLETLSAQNHSASMTEV 324
            NF+    +P   KP  P           +   +++  QN S S  E+
Sbjct: 311 GNFQ----APPAEKPAAPAPAKDALRALTQRGHDSVYQQNKSVSTDEL 354


>gi|29171740 phosphatidic acid phosphatase type 2B [Homo sapiens]
          Length = 311

 Score =  132 bits (333), Expect = 3e-31
 Identities = 99/323 (30%), Positives = 157/323 (48%), Gaps = 35/323 (10%)

Query: 2   AVGNNTQRSYSIIPCFIFVEL--VIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPY 59
           A+ NN +RS S     I ++L  + MAG   L +    T T + + +GF+C D  +  P 
Sbjct: 21  ALNNNPRRSGSKRVLLICLDLFCLFMAG---LPFLIIETSTIKPYHRGFYCNDESIKYPL 77

Query: 60  PGTEEESFITPLVLYCVLAATPTAIIFIGEI-SMYFIKSTRESLIAQEKTILTGECCYLN 118
              E    I   VL  V        I  GE   +Y++K +R ++               N
Sbjct: 78  KTGET---INDAVLCAVGIVIAILAIITGEFYRIYYLKKSRSTI--------------QN 120

Query: 119 PLLRRIIRFTGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINN 178
           P +  + +  G F FG   +  F +  +V  G L P+FL+VC P+++  +C     +I N
Sbjct: 121 PYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCS--EGYIQN 178

Query: 179 GNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCT 238
              C GD   +++AR+SF S HA+ S+Y+ LY  +Y+ +    + +RL +P+L    +  
Sbjct: 179 YR-CRGDDSKVQEARKSFFSGHASFSMYTMLYLVLYLQARFTWRGARLLRPLLQFTLIMM 237

Query: 239 AFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVP 298
           AF TGL+RVS++++H SDV+AGF  G  VA  +   V   FK T+ + S P P   +   
Sbjct: 238 AFYTGLSRVSDHKHHPSDVLAGFAQGALVACCIVFFVSDLFK-TKTTLSLPAPAIRK--- 293

Query: 299 LMAFPRIESPLETLSAQNHSASM 321
                 I SP++ +   NH   M
Sbjct: 294 -----EILSPVDIIDRNNHHNMM 311


>gi|29171742 phosphatidic acid phosphatase type 2B [Homo sapiens]
          Length = 311

 Score =  132 bits (333), Expect = 3e-31
 Identities = 99/323 (30%), Positives = 157/323 (48%), Gaps = 35/323 (10%)

Query: 2   AVGNNTQRSYSIIPCFIFVEL--VIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPY 59
           A+ NN +RS S     I ++L  + MAG   L +    T T + + +GF+C D  +  P 
Sbjct: 21  ALNNNPRRSGSKRVLLICLDLFCLFMAG---LPFLIIETSTIKPYHRGFYCNDESIKYPL 77

Query: 60  PGTEEESFITPLVLYCVLAATPTAIIFIGEI-SMYFIKSTRESLIAQEKTILTGECCYLN 118
              E    I   VL  V        I  GE   +Y++K +R ++               N
Sbjct: 78  KTGET---INDAVLCAVGIVIAILAIITGEFYRIYYLKKSRSTI--------------QN 120

Query: 119 PLLRRIIRFTGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINN 178
           P +  + +  G F FG   +  F +  +V  G L P+FL+VC P+++  +C     +I N
Sbjct: 121 PYVAALYKQVGCFLFGCAISQSFTDIAKVSIGRLRPHFLSVCNPDFSQINCS--EGYIQN 178

Query: 179 GNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCT 238
              C GD   +++AR+SF S HA+ S+Y+ LY  +Y+ +    + +RL +P+L    +  
Sbjct: 179 YR-CRGDDSKVQEARKSFFSGHASFSMYTMLYLVLYLQARFTWRGARLLRPLLQFTLIMM 237

Query: 239 AFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFKGTQGSPSKPKPEDPRGVP 298
           AF TGL+RVS++++H SDV+AGF  G  VA  +   V   FK T+ + S P P   +   
Sbjct: 238 AFYTGLSRVSDHKHHPSDVLAGFAQGALVACCIVFFVSDLFK-TKTTLSLPAPAIRK--- 293

Query: 299 LMAFPRIESPLETLSAQNHSASM 321
                 I SP++ +   NH   M
Sbjct: 294 -----EILSPVDIIDRNNHHNMM 311


>gi|29171738 phosphatidic acid phosphatase type 2A isoform 2 [Homo
           sapiens]
          Length = 285

 Score =  117 bits (292), Expect = 2e-26
 Identities = 72/236 (30%), Positives = 117/236 (49%), Gaps = 21/236 (8%)

Query: 46  QGFFCQDGDLMKPYPGTEEESFITPLVLYCVLAATPTAIIFIGE-ISMYFIKSTRESLIA 104
           +GFFC+D  +  PY     +S +T  VL  V    P + I +GE +S+Y           
Sbjct: 37  RGFFCKDNSINYPY----HDSTVTSTVLILVGVGLPISSIILGETLSVYC---------- 82

Query: 105 QEKTILTGECCYLNPLLRRIIRFTGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNY 164
               +L       N  +  I +  G F FG  A+    +  +   G L P+FL VC P++
Sbjct: 83  ---NLLHSNSFIRNNYIATIYKAIGTFLFGAAASQSLTDIAKYSIGRLRPHFLDVCDPDW 139

Query: 165 TSADCQAHHQFINNGNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSS 224
           +  +C   +       IC G+ E +++ R SF S H++ S+Y  L+  +Y+ + +K   +
Sbjct: 140 SKINCSDGYI---EYYICRGNAERVKEGRLSFYSGHSSFSMYCMLFVALYLQARMKGDWA 196

Query: 225 RLAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFK 280
           RL +P L  G +  +   GL+RVS+Y++H SDV+ G I G  VA+ + + V   FK
Sbjct: 197 RLLRPTLQFGLVAVSIYVGLSRVSDYKHHWSDVLTGLIQGALVAILVAVYVSDFFK 252


>gi|29171736 phosphatidic acid phosphatase type 2A isoform 1 [Homo
           sapiens]
          Length = 284

 Score =  107 bits (266), Expect = 2e-23
 Identities = 68/236 (28%), Positives = 114/236 (48%), Gaps = 21/236 (8%)

Query: 46  QGFFCQDGDLMKPYPGTEEESFITPLVLYCVLAATPTAIIFIGE-ISMYFIKSTRESLIA 104
           +G FC D  +  PY    +E  I   +L  ++      +I +GE +S+Y           
Sbjct: 36  RGVFCNDESIKYPY----KEDTIPYALLGGIIIPFSIIVIILGETLSVYC---------- 81

Query: 105 QEKTILTGECCYLNPLLRRIIRFTGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNY 164
               +L       N  +  I +  G F FG  A+    +  +   G L P+FL VC P++
Sbjct: 82  ---NLLHSNSFIRNNYIATIYKAIGTFLFGAAASQSLTDIAKYSIGRLRPHFLDVCDPDW 138

Query: 165 TSADCQAHHQFINNGNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSS 224
           +  +C   +       IC G+ E +++ R SF S H++ S+Y  L+  +Y+ + +K   +
Sbjct: 139 SKINCSDGYI---EYYICRGNAERVKEGRLSFYSGHSSFSMYCMLFVALYLQARMKGDWA 195

Query: 225 RLAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFK 280
           RL +P L  G +  +   GL+RVS+Y++H SDV+ G I G  VA+ + + V   FK
Sbjct: 196 RLLRPTLQFGLVAVSIYVGLSRVSDYKHHWSDVLTGLIQGALVAILVAVYVSDFFK 251


>gi|4505977 phosphatidic acid phosphatase type 2C isoform 1 [Homo
           sapiens]
          Length = 288

 Score = 92.0 bits (227), Expect = 6e-19
 Identities = 59/234 (25%), Positives = 109/234 (46%), Gaps = 21/234 (8%)

Query: 46  QGFFCQDGDLMKPYPGTEEESFITPLVLYCVLAATPTAIIFIGEISMYFIKSTRESLIAQ 105
           +GF+C D  +  PY     ++    L+    + AT   +I +     Y + + R  L ++
Sbjct: 34  RGFYCGDDSIRYPY---RPDTITHGLMAGVTITAT---VILVSAGEAYLVYTDR--LYSR 85

Query: 106 EKTILTGECCYLNPLLRRIIRFTGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYT 165
                       N  +  + +  G F FG   +    +  + + G L P FL VC P+++
Sbjct: 86  SD---------FNNYVAAVYKVLGTFLFGAAVSQSLTDLAKYMIGRLRPNFLAVCDPDWS 136

Query: 166 SADCQAHHQFINNGNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSR 225
             +C  + Q      +C G+   + +AR SF S H++  +Y  ++  +Y+ + +  K +R
Sbjct: 137 RVNCSVYVQL---EKVCRGNPADVTEARLSFYSGHSSFGMYCMVFLALYVQARLCWKWAR 193

Query: 226 LAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNF 279
           L +P +    +  A   G  RVS+Y++H SDV+ G + G  VA  L +C + +F
Sbjct: 194 LLRPTVQFFLVAFALYVGYTRVSDYKHHWSDVLVGLLQGALVAA-LTVCYISDF 246


>gi|29171747 phosphatidic acid phosphatase type 2C isoform 3 [Homo
           sapiens]
          Length = 309

 Score = 92.0 bits (227), Expect = 6e-19
 Identities = 59/234 (25%), Positives = 109/234 (46%), Gaps = 21/234 (8%)

Query: 46  QGFFCQDGDLMKPYPGTEEESFITPLVLYCVLAATPTAIIFIGEISMYFIKSTRESLIAQ 105
           +GF+C D  +  PY     ++    L+    + AT   +I +     Y + + R  L ++
Sbjct: 55  RGFYCGDDSIRYPY---RPDTITHGLMAGVTITAT---VILVSAGEAYLVYTDR--LYSR 106

Query: 106 EKTILTGECCYLNPLLRRIIRFTGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYT 165
                       N  +  + +  G F FG   +    +  + + G L P FL VC P+++
Sbjct: 107 SD---------FNNYVAAVYKVLGTFLFGAAVSQSLTDLAKYMIGRLRPNFLAVCDPDWS 157

Query: 166 SADCQAHHQFINNGNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSR 225
             +C  + Q      +C G+   + +AR SF S H++  +Y  ++  +Y+ + +  K +R
Sbjct: 158 RVNCSVYVQL---EKVCRGNPADVTEARLSFYSGHSSFGMYCMVFLALYVQARLCWKWAR 214

Query: 226 LAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNF 279
           L +P +    +  A   G  RVS+Y++H SDV+ G + G  VA  L +C + +F
Sbjct: 215 LLRPTVQFFLVAFALYVGYTRVSDYKHHWSDVLVGLLQGALVAA-LTVCYISDF 267


>gi|29171745 phosphatidic acid phosphatase type 2C isoform 2 [Homo
           sapiens]
          Length = 232

 Score = 88.6 bits (218), Expect = 7e-18
 Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 4/162 (2%)

Query: 118 NPLLRRIIRFTGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFIN 177
           N  +  + +  G F FG   +    +  + + G L P FL VC P+++  +C  + Q   
Sbjct: 33  NNYVAAVYKVLGTFLFGAAVSQSLTDLAKYMIGRLRPNFLAVCDPDWSRVNCSVYVQL-- 90

Query: 178 NGNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLC 237
              +C G+   + +AR SF S H++  +Y  ++  +Y+ + +  K +RL +P +    + 
Sbjct: 91  -EKVCRGNPADVTEARLSFYSGHSSFGMYCMVFLALYVQARLCWKWARLLRPTVQFFLVA 149

Query: 238 TAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNF 279
            A   G  RVS+Y++H SDV+ G + G  VA  L +C + +F
Sbjct: 150 FALYVGYTRVSDYKHHWSDVLVGLLQGALVAA-LTVCYISDF 190


>gi|156523237 phosphatidic acid phosphatase type 2 domain containing
           1B isoform 1 [Homo sapiens]
          Length = 264

 Score = 59.3 bits (142), Expect = 4e-09
 Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 14/141 (9%)

Query: 132 AFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINNGNICTGDLEVIEK 191
           +  L    +F N  +++ G   P F   C P     D  AH   +     CTGD +V+ +
Sbjct: 94  SLALALNGVFTNTIKLIVGRPRPDFFYRCFP-----DGLAHSDLM-----CTGDKDVVNE 143

Query: 192 ARRSFPSKHAALSIYSALYATMYITSTIK--TKSSRLAKPVLC--LGTLCTAFLTGLNRV 247
            R+SFPS H++ +     +A+ Y+   +   T   R      C  L  L  A +  L+R 
Sbjct: 144 GRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPQGRGKSWRFCAFLSPLLFAAVIALSRT 203

Query: 248 SEYRNHCSDVIAGFILGTAVA 268
            +Y++H  DV+ G ++G   A
Sbjct: 204 CDYKHHWQDVLVGSMIGMTFA 224


>gi|73611920 phosphatidic acid phosphatase type 2 domain containing
           1A [Homo sapiens]
          Length = 271

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 20/144 (13%)

Query: 132 AFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINNGNICTGDLEVIEK 191
           +  L    +  N  +++ G   P F   C P+            +N+   CTGD +++ +
Sbjct: 88  SLALALNGVCTNTIKLIVGRPRPDFFYRCFPDGV----------MNSEMHCTGDPDLVSE 137

Query: 192 ARRSFPSKHAALSIYSALYATMYI-------TSTIKTKSSRLAKPVLCLGTLCTAFLTGL 244
            R+SFPS H++ +     + T Y+       T + + KS RL   +L    L  A +  L
Sbjct: 138 GRKSFPSIHSSFAFSGLGFTTFYLAGKLHCFTESGRGKSWRLCAAIL---PLYCAMMIAL 194

Query: 245 NRVSEYRNHCSDVIAGFILGTAVA 268
           +R+ +Y++H  D   G ++G   A
Sbjct: 195 SRMCDYKHHWQDSFVGGVIGLIFA 218


>gi|156523235 phosphatidic acid phosphatase type 2 domain containing
           1B isoform 2 [Homo sapiens]
          Length = 216

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 14/126 (11%)

Query: 132 AFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINNGNICTGDLEVIEK 191
           +  L    +F N  +++ G   P F   C P     D  AH   +     CTGD +V+ +
Sbjct: 94  SLALALNGVFTNTIKLIVGRPRPDFFYRCFP-----DGLAHSDLM-----CTGDKDVVNE 143

Query: 192 ARRSFPSKHAALSIYSALYATMYITSTIK--TKSSRLAKPVLC--LGTLCTAFLTGLNRV 247
            R+SFPS H++ +     +A+ Y+   +   T   R      C  L  L  A +  L+R 
Sbjct: 144 GRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPQGRGKSWRFCAFLSPLLFAAVIALSRT 203

Query: 248 SEYRNH 253
            +Y++H
Sbjct: 204 CDYKHH 209


>gi|156523239 phosphatidic acid phosphatase type 2 domain containing
           1B isoform 3 [Homo sapiens]
          Length = 176

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 12/86 (13%)

Query: 132 AFGLFATDIFVNAGQVVTGHLTPYFLTVCKPNYTSADCQAHHQFINNGNICTGDLEVIEK 191
           +  L    +F N  +++ G   P F   C P     D  AH   +     CTGD +V+ +
Sbjct: 94  SLALALNGVFTNTIKLIVGRPRPDFFYRCFP-----DGLAHSDLM-----CTGDKDVVNE 143

Query: 192 ARRSFPSKHAALS--IYSALYATMYI 215
            R+SFPS H++    I++  YA  +I
Sbjct: 144 GRKSFPSGHSSCMNIIWTLPYACFHI 169


>gi|223029457 phosphatidic acid phosphatase type 2 domain containing
           3 [Homo sapiens]
          Length = 271

 Score = 33.5 bits (75), Expect = 0.26
 Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 10/70 (14%)

Query: 195 SFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCTAFLTGLNRVSEYRNHC 254
           +FP+ HA+ +   A+ +  +++  +     R+   +L L  LC     GL+RV   R+H 
Sbjct: 188 AFPAGHASRA---AMVSKFFLSHLVLAVPLRV---LLVLWALCV----GLSRVMIGRHHV 237

Query: 255 SDVIAGFILG 264
           +DV++GF++G
Sbjct: 238 TDVLSGFVIG 247


>gi|171184408 solute carrier family 6 (neurotransmitter transporter,
           betaine/GABA), member 12 [Homo sapiens]
          Length = 614

 Score = 33.1 bits (74), Expect = 0.35
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)

Query: 236 LCTAFLTGLNRVSEYRNHC-SDVIAGFILGTA---VALFLGMCVVHNFKGTQGSPSKPKP 291
           +C   LT L   ++Y N+C  D IA   L +A   VA F+   ++      QG P     
Sbjct: 297 ICQGCLTALGSYNKYHNNCYKDCIALCFLNSATSFVAGFVVFSILGFMSQEQGVPISEVA 356

Query: 292 EDPRGVPLMAFPR 304
           E   G+  +AFP+
Sbjct: 357 ESGPGLAFIAFPK 369


>gi|171184406 solute carrier family 6 (neurotransmitter transporter,
           betaine/GABA), member 12 [Homo sapiens]
          Length = 614

 Score = 33.1 bits (74), Expect = 0.35
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)

Query: 236 LCTAFLTGLNRVSEYRNHC-SDVIAGFILGTA---VALFLGMCVVHNFKGTQGSPSKPKP 291
           +C   LT L   ++Y N+C  D IA   L +A   VA F+   ++      QG P     
Sbjct: 297 ICQGCLTALGSYNKYHNNCYKDCIALCFLNSATSFVAGFVVFSILGFMSQEQGVPISEVA 356

Query: 292 EDPRGVPLMAFPR 304
           E   G+  +AFP+
Sbjct: 357 ESGPGLAFIAFPK 369


>gi|171184404 solute carrier family 6 (neurotransmitter transporter,
           betaine/GABA), member 12 [Homo sapiens]
          Length = 614

 Score = 33.1 bits (74), Expect = 0.35
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 4/73 (5%)

Query: 236 LCTAFLTGLNRVSEYRNHC-SDVIAGFILGTA---VALFLGMCVVHNFKGTQGSPSKPKP 291
           +C   LT L   ++Y N+C  D IA   L +A   VA F+   ++      QG P     
Sbjct: 297 ICQGCLTALGSYNKYHNNCYKDCIALCFLNSATSFVAGFVVFSILGFMSQEQGVPISEVA 356

Query: 292 EDPRGVPLMAFPR 304
           E   G+  +AFP+
Sbjct: 357 ESGPGLAFIAFPK 369


>gi|66773040 phosphatidic acid phosphatase type 2 domain containing
           2 [Homo sapiens]
          Length = 295

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 10/70 (14%)

Query: 195 SFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCTAFLTGLNRVSEYRNHC 254
           SFPS HA  +   + +   ++          LA P+  L  L  AF+ GL+RV   R++ 
Sbjct: 209 SFPSGHATRAALMSRFILNHLV---------LAIPLRVLVVLW-AFVLGLSRVMLGRHNV 258

Query: 255 SDVIAGFILG 264
           +DV  GF LG
Sbjct: 259 TDVAFGFFLG 268


>gi|21361581 solute carrier family 6 (neurotransmitter transporter,
           GABA), member 13 [Homo sapiens]
          Length = 602

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 14/78 (17%)

Query: 236 LCTAFLTGLNRVSEYRNHC-SDVIA--------GFILGTAVALFLGMCVVHNFKGTQGSP 286
           +C   LT L   ++Y N+C  D IA         F+ G A+   LG          QG P
Sbjct: 292 ICLGCLTALGSYNKYHNNCYRDCIALCFLNSGTSFVAGFAIFSILGF-----MSQEQGVP 346

Query: 287 SKPKPEDPRGVPLMAFPR 304
                E   G+  +A+PR
Sbjct: 347 ISEVAESGPGLAFIAYPR 364


>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
           sapiens]
          Length = 1939

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 15/46 (32%), Positives = 22/46 (47%)

Query: 154 PYFLTVCKPNYTSADCQAHHQFINNGNICTGDLEVIEKARRSFPSK 199
           P+F+    PN T       H+ + +   C G LE I   R+ FPS+
Sbjct: 671 PHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICRKGFPSR 716


>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
           sapiens]
          Length = 1941

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 15/46 (32%), Positives = 22/46 (47%)

Query: 154 PYFLTVCKPNYTSADCQAHHQFINNGNICTGDLEVIEKARRSFPSK 199
           P+F+    PN T       H+ + +   C G LE I   R+ FPS+
Sbjct: 673 PHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICRKGFPSR 718


>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
           sapiens]
          Length = 1941

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 15/46 (32%), Positives = 22/46 (47%)

Query: 154 PYFLTVCKPNYTSADCQAHHQFINNGNICTGDLEVIEKARRSFPSK 199
           P+F+    PN T       H+ + +   C G LE I   R+ FPS+
Sbjct: 673 PHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICRKGFPSR 718


>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal
           [Homo sapiens]
          Length = 1937

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 15/46 (32%), Positives = 22/46 (47%)

Query: 154 PYFLTVCKPNYTSADCQAHHQFINNGNICTGDLEVIEKARRSFPSK 199
           P+F+    PN T       H+ + +   C G LE I   R+ FPS+
Sbjct: 670 PHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICRKGFPSR 715


>gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo
           sapiens]
          Length = 1939

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 15/46 (32%), Positives = 22/46 (47%)

Query: 154 PYFLTVCKPNYTSADCQAHHQFINNGNICTGDLEVIEKARRSFPSK 199
           P+F+    PN T       H+ + +   C G LE I   R+ FPS+
Sbjct: 671 PHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICRKGFPSR 716


>gi|239754660 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 221

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 24/119 (20%), Positives = 51/119 (42%), Gaps = 4/119 (3%)

Query: 10  SYSIIPCFIFVELVIMAGTVLLAYYFECT--DTFQVHIQGFF--CQDGDLMKPYPGTEEE 65
           S++I+P    +  +I+    +  ++   T  ++ +V   G F  C +    KP P +   
Sbjct: 13  SWAIVPALTSLGYLIILVVSIFPFWVRLTNEESHEVFFSGLFENCFNAKCWKPRPLSIYI 72

Query: 66  SFITPLVLYCVLAATPTAIIFIGEISMYFIKSTRESLIAQEKTILTGECCYLNPLLRRI 124
                 +L  V  A  T  I +   S +F ++ +++ +    +  TG C +L  +L  +
Sbjct: 73  ILGRVFLLSAVFLAFVTTFIMMPFASEFFPRTWKQNFVLACISFFTGACAFLALVLHAL 131


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.138    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,051,097
Number of Sequences: 37866
Number of extensions: 524021
Number of successful extensions: 2592
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 2526
Number of HSP's gapped (non-prelim): 52
length of query: 325
length of database: 18,247,518
effective HSP length: 102
effective length of query: 223
effective length of database: 14,385,186
effective search space: 3207896478
effective search space used: 3207896478
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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