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Search of human proteins with 46560555
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46560555 transmembrane protein 132E [Homo sapiens]
(984 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46560555 transmembrane protein 132E [Homo sapiens] 1961 0.0
gi|171460922 transmembrane protein 132D [Homo sapiens] 571 e-162
gi|89111953 transmembrane protein 132B [Homo sapiens] 516 e-146
gi|209870052 transmembrane protein 132C [Homo sapiens] 492 e-139
gi|30089935 transmembrane protein 132A isoform a [Homo sapiens] 404 e-112
gi|30089937 transmembrane protein 132A isoform b [Homo sapiens] 403 e-112
gi|169205040 PREDICTED: similar to TMEM132B protein [Homo sapiens] 92 2e-18
gi|169205620 PREDICTED: similar to TMEM132B protein [Homo sapiens] 92 2e-18
gi|239744766 PREDICTED: hypothetical protein [Homo sapiens] 92 2e-18
gi|21389357 MAPK-interacting and spindle-stabilizing protein [Ho... 43 0.001
gi|9558729 golgi associated, gamma adaptin ear containing, ARF b... 42 0.002
gi|4507545 G protein-coupled receptor 137B [Homo sapiens] 40 0.008
gi|13994287 BTE-binding protein 4 [Homo sapiens] 40 0.014
gi|6631102 protocadherin 8 isoform 1 precursor [Homo sapiens] 40 0.014
gi|83367077 mucin 16 [Homo sapiens] 39 0.018
gi|123173757 RAVER1 [Homo sapiens] 39 0.018
gi|58761544 amine oxidase (flavin containing) domain 2 isoform a... 39 0.024
gi|58761546 amine oxidase (flavin containing) domain 2 isoform b... 39 0.024
gi|19924103 synapsin II isoform IIa [Homo sapiens] 38 0.041
gi|209969686 GRAM domain containing 1A isoform 2 [Homo sapiens] 38 0.041
gi|92110010 GRAM domain containing 1A isoform 1 [Homo sapiens] 38 0.041
gi|21237808 SWI/SNF-related matrix-associated actin-dependent re... 38 0.053
gi|62945417 dystrophia myotonica-containing WD repeat motif prot... 38 0.053
gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s... 37 0.070
gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa... 37 0.070
gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s... 37 0.070
gi|24308326 BR serine/threonine kinase 1 [Homo sapiens] 37 0.070
gi|239743776 PREDICTED: hypothetical protein XP_002344295 [Homo ... 37 0.091
gi|44890065 hypothetical protein LOC6936 [Homo sapiens] 37 0.12
gi|134142824 forkhead box D2 [Homo sapiens] 37 0.12
>gi|46560555 transmembrane protein 132E [Homo sapiens]
Length = 984
Score = 1961 bits (5080), Expect = 0.0
Identities = 984/984 (100%), Positives = 984/984 (100%)
Query: 1 MAPGMSGRGGAALLCLSALLAHASGRSHPASPSPPGPQASPVLPVSYRLSHTRLAFFLRE 60
MAPGMSGRGGAALLCLSALLAHASGRSHPASPSPPGPQASPVLPVSYRLSHTRLAFFLRE
Sbjct: 1 MAPGMSGRGGAALLCLSALLAHASGRSHPASPSPPGPQASPVLPVSYRLSHTRLAFFLRE 60
Query: 61 ARPPSPAVANSSLQRSEPFVVFQTKELPVLNVSLGPFSTSQVVARELLQPSSTLDIPERL 120
ARPPSPAVANSSLQRSEPFVVFQTKELPVLNVSLGPFSTSQVVARELLQPSSTLDIPERL
Sbjct: 61 ARPPSPAVANSSLQRSEPFVVFQTKELPVLNVSLGPFSTSQVVARELLQPSSTLDIPERL 120
Query: 121 TVNWKVRAFIVRSHVPASQPVVQVLFYVAGRDWDDFGVTERLPCVRLHAFRDAREHPLLR 180
TVNWKVRAFIVRSHVPASQPVVQVLFYVAGRDWDDFGVTERLPCVRLHAFRDAREHPLLR
Sbjct: 121 TVNWKVRAFIVRSHVPASQPVVQVLFYVAGRDWDDFGVTERLPCVRLHAFRDAREHPLLR 180
Query: 181 IGSISLFRPPPRRTLQEHRLDSNLMIRLPDRPLKPGEVLSILLYLAPNSSSPSSPSVEHF 240
IGSISLFRPPPRRTLQEHRLDSNLMIRLPDRPLKPGEVLSILLYLAPNSSSPSSPSVEHF
Sbjct: 181 IGSISLFRPPPRRTLQEHRLDSNLMIRLPDRPLKPGEVLSILLYLAPNSSSPSSPSVEHF 240
Query: 241 TLRVKAKKGVTLLGTKSRSGQWHVTSELLTGAKHSTATVDVAWAQSTPLPPREGQGPLEI 300
TLRVKAKKGVTLLGTKSRSGQWHVTSELLTGAKHSTATVDVAWAQSTPLPPREGQGPLEI
Sbjct: 241 TLRVKAKKGVTLLGTKSRSGQWHVTSELLTGAKHSTATVDVAWAQSTPLPPREGQGPLEI 300
Query: 301 LQLDFEMENFTSQSVKRRIMWHIDYRGHGALPDLERAVTELTVIQRDVQAILPLAMDTEI 360
LQLDFEMENFTSQSVKRRIMWHIDYRGHGALPDLERAVTELTVIQRDVQAILPLAMDTEI
Sbjct: 301 LQLDFEMENFTSQSVKRRIMWHIDYRGHGALPDLERAVTELTVIQRDVQAILPLAMDTEI 360
Query: 361 INTAILTGRTVAIPVKVIAIEVNGLVLDISALVECESDNEDIIKVSSSCDYVFVSGKESR 420
INTAILTGRTVAIPVKVIAIEVNGLVLDISALVECESDNEDIIKVSSSCDYVFVSGKESR
Sbjct: 361 INTAILTGRTVAIPVKVIAIEVNGLVLDISALVECESDNEDIIKVSSSCDYVFVSGKESR 420
Query: 421 GSMNARVTFRYDVLNAPLEMTVWVPKLPLHIELSDARLSQVKGWRVPILPDRRSVRESED 480
GSMNARVTFRYDVLNAPLEMTVWVPKLPLHIELSDARLSQVKGWRVPILPDRRSVRESED
Sbjct: 421 GSMNARVTFRYDVLNAPLEMTVWVPKLPLHIELSDARLSQVKGWRVPILPDRRSVRESED 480
Query: 481 EDEEEEERRQSASRGCTLQYQHATLQVFTQFHTTSSEGTDQVVTMLGPDWLVEVTDLVSD 540
EDEEEEERRQSASRGCTLQYQHATLQVFTQFHTTSSEGTDQVVTMLGPDWLVEVTDLVSD
Sbjct: 481 EDEEEEERRQSASRGCTLQYQHATLQVFTQFHTTSSEGTDQVVTMLGPDWLVEVTDLVSD 540
Query: 541 FMRVGDPRVAHMVDSSTLAGLEPGTTPFKVVSPLTEAVLGETLLTVTEEKVSITQLQAQV 600
FMRVGDPRVAHMVDSSTLAGLEPGTTPFKVVSPLTEAVLGETLLTVTEEKVSITQLQAQV
Sbjct: 541 FMRVGDPRVAHMVDSSTLAGLEPGTTPFKVVSPLTEAVLGETLLTVTEEKVSITQLQAQV 600
Query: 601 VASLALSLRPSPGSSHTILATTAAQQTLSFLKQEALLSLWLSYSDGTTAPLSLYSPRDYG 660
VASLALSLRPSPGSSHTILATTAAQQTLSFLKQEALLSLWLSYSDGTTAPLSLYSPRDYG
Sbjct: 601 VASLALSLRPSPGSSHTILATTAAQQTLSFLKQEALLSLWLSYSDGTTAPLSLYSPRDYG 660
Query: 661 LLVSSLDEHVATVTQDRAFPLVVAEAEGSGELLRAELTIAESCQKTKRKSVLATTPVGLR 720
LLVSSLDEHVATVTQDRAFPLVVAEAEGSGELLRAELTIAESCQKTKRKSVLATTPVGLR
Sbjct: 661 LLVSSLDEHVATVTQDRAFPLVVAEAEGSGELLRAELTIAESCQKTKRKSVLATTPVGLR 720
Query: 721 VHFGRDEEDPTYDYPGPSQPGPGGGEDEARGAGPPGSALPAPEAPGPGTASPVVPPTEDF 780
VHFGRDEEDPTYDYPGPSQPGPGGGEDEARGAGPPGSALPAPEAPGPGTASPVVPPTEDF
Sbjct: 721 VHFGRDEEDPTYDYPGPSQPGPGGGEDEARGAGPPGSALPAPEAPGPGTASPVVPPTEDF 780
Query: 781 LPLPTGFLQVPRGLTDLEIGMYALLGVFCLAILVFLINCIVFVLRYRHKRIPPEGQTSMD 840
LPLPTGFLQVPRGLTDLEIGMYALLGVFCLAILVFLINCIVFVLRYRHKRIPPEGQTSMD
Sbjct: 781 LPLPTGFLQVPRGLTDLEIGMYALLGVFCLAILVFLINCIVFVLRYRHKRIPPEGQTSMD 840
Query: 841 HSHHWVFLGNGQPLRVQGELSPPAGNPLETVPAFCHGDHHSSGSSQTSVQSQVHGRGDGS 900
HSHHWVFLGNGQPLRVQGELSPPAGNPLETVPAFCHGDHHSSGSSQTSVQSQVHGRGDGS
Sbjct: 841 HSHHWVFLGNGQPLRVQGELSPPAGNPLETVPAFCHGDHHSSGSSQTSVQSQVHGRGDGS 900
Query: 901 SGGSARDQAEDPASSPTSKRKRVKFTTFTTLPSEELAYDSVPAGEEDEEEEEDLGWGCPD 960
SGGSARDQAEDPASSPTSKRKRVKFTTFTTLPSEELAYDSVPAGEEDEEEEEDLGWGCPD
Sbjct: 901 SGGSARDQAEDPASSPTSKRKRVKFTTFTTLPSEELAYDSVPAGEEDEEEEEDLGWGCPD 960
Query: 961 VAGPTRPTAPPDLHNYMRRIKEIA 984
VAGPTRPTAPPDLHNYMRRIKEIA
Sbjct: 961 VAGPTRPTAPPDLHNYMRRIKEIA 984
>gi|171460922 transmembrane protein 132D [Homo sapiens]
Length = 1099
Score = 571 bits (1471), Expect = e-162
Identities = 344/872 (39%), Positives = 502/872 (57%), Gaps = 85/872 (9%)
Query: 168 HAFRDAREHPLLRIGSISLFRPPPRRTLQEHRLDSNLMIRLPDRPLKPGEVLSILLYLAP 227
H+ D PL RIGSI L++ + +L+E RLD+++ I + ++ G+VL+ + ++
Sbjct: 254 HSDIDESGPPLQRIGSIFLYQTHRKPSLRELRLDNSVAIHYIPKTVRKGDVLTFPVSISR 313
Query: 228 NSSSPSSPSVEHFTLRVKAKKGVTLLGTKSRSGQ-WHVTSELLTGAKHSTATVDVAWAQS 286
NS+ + FTLR K KKGV ++G ++ S W V K++ A + V ++
Sbjct: 314 NSTE------DRFTLRAKVKKGVNIIGVRASSPSIWDVKERTDYTGKYAPAVI-VCQKKA 366
Query: 287 TPLPPREGQGPLEILQLDFEMENFTSQSVKRRIMWHIDYRGHGALPDLERAVTELTVIQR 346
E++Q+D E+E + + W ++Y G DL V+++ V +
Sbjct: 367 AGSENSADGASYEVMQIDVEVEEPGDLPATQLVTWQVEYPGE-ITSDL--GVSKIYVSPK 423
Query: 347 DVQAILPLAMDTEIINTAILTGRTVAIPVKVIAIEVNGLVLDISALVECESDNEDIIKVS 406
D+ ++PLAM+ EI+NTAILTG+TVA+PVKV+++E +G V ++ VEC S +ED+IKVS
Sbjct: 424 DLIGVVPLAMEAEILNTAILTGKTVAVPVKVVSVEDDGTVTELLESVECRSSDEDVIKVS 483
Query: 407 SSCDYVFVSGKESRGSMNARVTFRYDVLNAPLEMTVWVPKLPLHIELSDARLSQVKGWRV 466
CDYVFV+GKE +G +N V F Y L++PLEMTVWVP+LPL IE+SD L+Q+KGWRV
Sbjct: 484 DRCDYVFVNGKEMKGKVNVVVNFTYQHLSSPLEMTVWVPRLPLQIEVSDTELNQIKGWRV 543
Query: 467 PILPDRRSVRESEDEDEEEEERRQSASRGCTLQYQHATLQVFTQFHTTSSEGTDQVVTML 526
PI+ RR +SE+E E++ERR RGCTLQYQHA ++V TQF ++ + +L
Sbjct: 544 PIVSSRRPAGDSEEE--EDDERR---GRGCTLQYQHAMVRVLTQFVAEAAGPGGHLAHLL 598
Query: 527 GPDWLVEVTDLVSDFMRVGDPRVAHMVDSSTLAGLEPGTTPFKVVSPLTEAVLGETLLTV 586
G DW V++T+L++DFM+V +PR+A + L G E G T +++SPL++ +L E +TV
Sbjct: 599 GSDWQVDITELINDFMQVEEPRIAKLQGGQILMGQELGMTTIQILSPLSDTILAEKTITV 658
Query: 587 TEEKVSITQLQAQVVASLALSLRPSPGSSHTILATTAAQQTLSFLKQEALLSLWLSYSDG 646
+EKV+IT L Q+V L+LSL+ SPGS+ I AT AQ+ L KQEA +S W+ +SDG
Sbjct: 659 LDEKVTITDLGVQLVTGLSLSLQLSPGSNRAIFATAVAQELLQRPKQEAAISCWVQFSDG 718
Query: 647 TTAPLSLYSPRDYGLLVSSLDEHVATVTQDRAF--PLVVAEAEGSGELLRAELTIAESCQ 704
+ PL +Y +D+ L+ +SLDE V ++ QD F P++ AE EG G L++ E+ I+ESCQ
Sbjct: 719 SVTPLDIYDGKDFSLMATSLDEKVVSIHQDPKFKWPIIAAETEGQGTLVKVEMVISESCQ 778
Query: 705 KTKRKSVLATTPVGLRVHFGRDEEDPTYD---YPG-------------PSQPGPGGGEDE 748
K+KRKSVLA ++V FG+++ +P + G P +P G E
Sbjct: 779 KSKRKSVLAVGTANIKVKFGQNDANPNTSDSRHTGAGVHMENNVSDRRPKKPSQEWGSQE 838
Query: 749 ARGAGPPGSALPAPEAPGPGTASPVVP-------------------------PTEDFLPL 783
+ G S++ E G T ++ P + LP
Sbjct: 839 GQYYG--SSSMGLMEGRGTTTDRSILQKKKGQESLLDDNSHLQTIPSDLTSFPAQVDLPR 896
Query: 784 PTG------FLQVPRGLTDLEIGMYALLGVFCLAILVFLINCIVFVLRYRHKRIPPEGQT 837
G +Q +GL+DLEIGMYALLGVFCLAILVFLINC+ F L+YRHK++P E Q
Sbjct: 897 SNGEMDGNDLMQASKGLSDLEIGMYALLGVFCLAILVFLINCVTFALKYRHKQVPFEEQE 956
Query: 838 SMDHSHHWVFLGNGQPLRVQGELSPPAGNPLETVPAFCHG------DHHSSGSSQTSVQS 891
M HSH WV L N L ++ ++ A + E + A G + S +SQ S+
Sbjct: 957 GMSHSHDWVGLSNRTEL-LENHIN-FASSQDEQITAIDRGMDFEESKYLLSTNSQKSING 1014
Query: 892 QVHGRGDGSSGGSARDQAEDPASSPTSKRKRVKFTTFTTLPSEELAYDSVPAGEE-DEEE 950
Q+ + G +DQ +P +SPTSKRKRVKFTTFT + S+ D P
Sbjct: 1015 QLF-KPLGPIIIDGKDQKSEPPTSPTSKRKRVKFTTFTAVSSD----DEYPTRNSIVMSS 1069
Query: 951 EEDLGWGCPDVAGPTRPTAPPDLHNYMRRIKE 982
E+D+ W C D+ P +LHNYM R+ E
Sbjct: 1070 EDDIKWVCQDL----DPGDCKELHNYMERLHE 1097
Score = 129 bits (325), Expect = 1e-29
Identities = 63/134 (47%), Positives = 94/134 (70%), Gaps = 3/134 (2%)
Query: 43 LPVSYRLSHTRLAFFLREARPPSPAVANSSLQ-RSEPFVVFQTKELPVLNVSLGPFSTSQ 101
LPV+Y +++ ++FFL+EA + NSSLQ R E F++++++ LPVLN S GPFS Q
Sbjct: 47 LPVTYHINNADVSFFLKEAN--QDIMRNSSLQSRVESFLIYKSRRLPVLNASYGPFSIEQ 104
Query: 102 VVARELLQPSSTLDIPERLTVNWKVRAFIVRSHVPASQPVVQVLFYVAGRDWDDFGVTER 161
VV ++L+ PS+ + ++NWK++A I+R V S+P VQVLF++ GRDWDD E+
Sbjct: 105 VVPQDLMLPSNPFGFTNKFSLNWKLKAHILRDKVYLSRPKVQVLFHIMGRDWDDRSAGEK 164
Query: 162 LPCVRLHAFRDARE 175
LPC+R+ AFR+ RE
Sbjct: 165 LPCLRVFAFRETRE 178
>gi|89111953 transmembrane protein 132B [Homo sapiens]
Length = 1078
Score = 516 bits (1330), Expect = e-146
Identities = 315/848 (37%), Positives = 482/848 (56%), Gaps = 74/848 (8%)
Query: 180 RIGSISLFRPPPRRTLQEHRLDSNLMIRLPDRPLKPGEVLSILLYLAPNSSSPSSPSVEH 239
RIGS+ ++ LD N++I +P ++ G+ + L+ L SS +
Sbjct: 258 RIGSVVVYPTQDDLKWSLVSLDENVVISVPLNLVREGDTATFLVSLT------SSSVADQ 311
Query: 240 FTLRVKAKKGVTLLGTK-SRSGQWHVTSELLTGAKHSTATVDVAWAQSTPLPPREGQGPL 298
FTLR+KA GV + + S QW V E+ G+ ++AT+ R
Sbjct: 312 FTLRIKAAAGVKITAVRVSSEDQWAVQEEIDNGSTQTSATL-TCMGHRPDTQSRVNGSFY 370
Query: 299 EILQLDFEMENFTSQSVKRRIMWHIDYRGHGALPDLERAVTELTVIQRDVQAILPLAMDT 358
EILQ+DF ++N + + ++I W ++Y ++ +L V+E+ V Q I+PLAMDT
Sbjct: 371 EILQVDFGIDNSSDLAGAQQITWQVEYPIEDSMSEL--VVSEIFVSQTTFVGIVPLAMDT 428
Query: 359 EIINTAILTGRTVAIPVKVIAIEVNGLVLDISALVECESDNEDIIKVSSSCDYVFVSGKE 418
E++NTAILTG+ V++PVKV+ ++ +G V+D+S VEC+S +ED+IKVS++CD +FV+GKE
Sbjct: 429 EVLNTAILTGKPVSVPVKVVGVQEDGSVVDVSESVECKSADEDVIKVSNNCDSIFVNGKE 488
Query: 419 SRGSMNARVTFRYDVLNAPLEMTVWVPKLPLHIELSDARLSQVKGWRVPILPDRRSVRES 478
+ ++ V F + + E+TVW P+LPL IE+SD LSQ+KGWR+P+ +RR RES
Sbjct: 489 MKSKVDTIVNFTHQHFTSQFEVTVWAPRLPLQIEISDTELSQIKGWRIPVAANRRPTRES 548
Query: 479 EDEDEEEEERRQSASRGCTLQYQHATLQVFTQFHTTSSEGTDQVVTMLGPDWLVEVTDLV 538
+DED+EE++ RGC+LQYQHAT++V TQF S Q+ MLGPDW ++TDLV
Sbjct: 549 DDEDDEEKK-----GRGCSLQYQHATVRVLTQF-VAESPDLGQLTYMLGPDWQFDITDLV 602
Query: 539 SDFMRVGDPRVAHMVDSSTLAGLEPGTTPFKVVSPLTEAVLGETLLTVTEEKVSITQLQA 598
++FM+V +P++A + D TLAG EPG T +V+SPL++++L E + V +++V+I +L
Sbjct: 603 TEFMKVEEPKIAQLQDGRTLAGREPGITTVQVLSPLSDSILAEKTVIVLDDRVTIAELGV 662
Query: 599 QVVASLALSLRPSPGSSHTILATTAAQQTLSFLKQEALLSLWLSYSDGTTAPLSLYSPRD 658
Q+VA ++LSL+P I++T AA L +QEA++S W+ +SDG+ PL +Y P+D
Sbjct: 663 QLVAGMSLSLQPHRADKRAIVSTAAALDVLQSPQQEAIVSSWILFSDGSVTPLDIYDPKD 722
Query: 659 YGLLVSSLDEHVATV--TQDRAFPLVVAEAEGSGELLRAELTIAESCQKTKRKSVLATTP 716
Y + VSSLDE V +V + +P+VVAE EG G L++ E+ I+E CQKTKRKSVLA
Sbjct: 723 YSVTVSSLDEMVVSVQANLESKWPIVVAEGEGQGPLIKLEMMISEPCQKTKRKSVLAVGK 782
Query: 717 VGLRVHF---GRDEEDPTYDYPGPSQP--------------------------GPGGGED 747
++V F + + + D G ++ P G E+
Sbjct: 783 GNVKVKFEPSSDEHQGGSNDIEGINREYKDHLSNSIEREGNQERAVQEWFHRGTPVGQEE 842
Query: 748 EARGAGPPGSALPAP----EAPGPGTASPVVPPTEDFLP---LPTGFLQVPRGLTDLEIG 800
+ P S + ++ GP + PT+ P P+ RGLTDLEIG
Sbjct: 843 STNKSTTPQSPMEGKNKLLKSGGPDAFTSF--PTQGKSPDPNNPSDLTVTSRGLTDLEIG 900
Query: 801 MYALLGVFCLAILVFLINCIVFVLRYRHKRIPPEGQTSMDHSHHWVFLGNG-QPLRVQGE 859
MYALL VFCLAILVFLINC+ F +YRHKR Q ++ HSH WV+LGN + L +
Sbjct: 901 MYALLCVFCLAILVFLINCVAFAWKYRHKRFAVSEQGNIPHSHDWVWLGNEVELLENPVD 960
Query: 860 LSPPAGNPLETVPAFCHGDHHS---SGSSQTSVQSQVHGRGDGSSGGSARDQAEDPASSP 916
++ P+ + + + +GSSQ + SQ+ D ++ +P +S
Sbjct: 961 ITLPSEECTTMIDRGLQFEERNFLLNGSSQKTFHSQLLRPSDYV---YEKEIKNEPMNSS 1017
Query: 917 TSKRKRVKFTTFTT-LPSEELAYDSVPAGEEDEEEEEDLGWGCPDVA-GPTRPTAPPDLH 974
KRKRVKFT++TT LP + Y + + D +++ W C D+ G ++ D
Sbjct: 1018 GPKRKRVKFTSYTTILPEDGGPYTNSILFDSD----DNIKWVCQDMGLGDSQ-----DFR 1068
Query: 975 NYMRRIKE 982
+YM +++
Sbjct: 1069 DYMESLQD 1076
Score = 111 bits (278), Expect = 3e-24
Identities = 55/134 (41%), Positives = 85/134 (63%), Gaps = 3/134 (2%)
Query: 43 LPVSYRLSHTRLAFFLREARPPSPAVANSSLQ-RSEPFVVFQTKELPVLNVSLGPFSTSQ 101
LP + +S+ +FFL+EA NSSLQ R EPF +++ + P++N S GPFS +
Sbjct: 38 LPTNLHISNAEESFFLKEAN--QDLTRNSSLQARVEPFFIYRARTPPIINASYGPFSVEK 95
Query: 102 VVARELLQPSSTLDIPERLTVNWKVRAFIVRSHVPASQPVVQVLFYVAGRDWDDFGVTER 161
++ +ELL S+ ++ NWK+++ I+ S + +++P VQ LFYV G WDD +TE
Sbjct: 96 IIPQELLLTSTAFGNMDKFPFNWKLKSHILDSSIYSNRPKVQTLFYVTGMGWDDSDLTED 155
Query: 162 LPCVRLHAFRDARE 175
LPCV++ AF +ARE
Sbjct: 156 LPCVKMFAFPEARE 169
>gi|209870052 transmembrane protein 132C [Homo sapiens]
Length = 996
Score = 492 bits (1267), Expect = e-139
Identities = 268/578 (46%), Positives = 379/578 (65%), Gaps = 30/578 (5%)
Query: 178 LLRIGSISLFRPPPRRTLQEHRLDSNLMIRLPDRPLKPGEVLSILLYLAPNSSSPSSPSV 237
L RIG++ L+R L E RLD N++I LP RP+K GEV++ + ++ NSS V
Sbjct: 154 LQRIGTVGLYRAQDSAQLSELRLDGNVVIWLPSRPVKQGEVVTAYVTISSNSS------V 207
Query: 238 EHFTLRVKAKKGVTLLGTKSRSG-QWHVTSELLTGAKHSTATVDVAWAQSTPLPPREGQG 296
+ F LR K KKGV +L ++R QW V E+ +G KH TATV Q PR
Sbjct: 208 DLFILRAKVKKGVNILSAQTREPRQWGVKQEVGSGGKHVTATVA---CQRLGPSPRNRSS 264
Query: 297 PL--EILQLDFEMENFTSQSVKRRIMWHIDYRGHGALPDLERAVTELTVIQRDVQAILPL 354
L E++Q++FE+ +F+S S + I W ++Y G + AV+E+ V Q+D+ I+PL
Sbjct: 265 SLFNEVVQMNFEIASFSSLSGTQPITWQVEYPRKGTT---DIAVSEIFVSQKDLVGIVPL 321
Query: 355 AMDTEIINTAILTGRTVAIPVKVIAIEVNGLVLDISALVECESDNEDIIKVSSSCDYVFV 414
AMDTEI+NTA+LTG+TVA+P+KV+++E N V+DIS VEC+S +ED+IKVS CDY+FV
Sbjct: 322 AMDTEILNTAVLTGKTVAMPIKVVSVEENSAVMDISESVECKSTDEDVIKVSERCDYIFV 381
Query: 415 SGKESRGSMNARVTFRYDVLNAPLEMTVWVPKLPLHIELSDARLSQVKGWRVPILPDRRS 474
+GKE +G M+A V F Y L+APL +TVWVP+LPL IE+SD LSQ+KGWRVPI+ ++R
Sbjct: 382 NGKEIKGKMDAVVNFTYQYLSAPLCVTVWVPRLPLQIEVSDTELSQIKGWRVPIVTNKRP 441
Query: 475 VRESEDEDEEEEERRQSASRGCTLQYQHATLQVFTQFHTTSSEGTDQVVTMLGPDWLVEV 534
RESEDEDEEE RGC LQYQHAT++V TQF + + Q +L P+W ++
Sbjct: 442 TRESEDEDEEERR-----GRGCALQYQHATVRVLTQFVSEGAGPWGQPNYLLSPNWQFDI 496
Query: 535 TDLVSDFMRVGDPRVAHMVDSSTLAGLEPGTTPFKVVSPLTEAVLGETLLTVTEEKVSIT 594
T LV+DFM++ +P VA + DS L G E G T +V+SPL++++L E +TV ++KVS+T
Sbjct: 497 THLVADFMKLEEPHVATLQDSRVLVGREVGMTTIQVLSPLSDSILAEKTITVLDDKVSVT 556
Query: 595 QLQAQVVASLALSLRPSPGSSHTILATTAAQQTLSFLKQEALLSLWLSYSDGTTAPLSLY 654
L Q+VA L+++L P+ +S + A A++ L KQEA+ S WL +SDG+ PL +Y
Sbjct: 557 DLAIQLVAGLSVALYPNAENSKAVTAVVTAEEVLRTPKQEAVFSTWLQFSDGSVTPLDIY 616
Query: 655 SPRDYGLLVSSLDEHVATVTQDRA--FPLVVAEAEGSGELLRAELTIAESCQKTKRKSVL 712
+D+ L +S DE V +V Q R+ +P+VVAE EG G L+R ++TIAE+CQK+KRKS+L
Sbjct: 617 DTKDFSLAATSQDEAVVSVPQPRSPRWPVVVAEGEGQGPLIRVDMTIAEACQKSKRKSIL 676
Query: 713 ATTPVGLRVHFGRDEEDPTYDYPGPSQPGPGGGEDEAR 750
A +RV FG+++ D S PG EDE +
Sbjct: 677 AVGVGNVRVKFGQNDAD--------SSPGGDYEEDEIK 706
Score = 184 bits (467), Expect = 4e-46
Identities = 103/204 (50%), Positives = 128/204 (62%), Gaps = 16/204 (7%)
Query: 788 LQVPRGLTDLEIGMYALLGVFCLAILVFLINCIVFVLRYRHKRIPPEGQTSMDHSHHWVF 847
+Q PRGL+DLEIGMYALLGVFCLAILVFLINC F L+YRHK++P EGQ SM HSH WV+
Sbjct: 802 VQTPRGLSDLEIGMYALLGVFCLAILVFLINCATFALKYRHKQVPLEGQASMTHSHDWVW 861
Query: 848 LGN-GQPLRVQGELSPPAGNP---LETVPAFCHGDHH--SSGSSQTSVQSQVHGRGDGSS 901
LGN + L G+ PP ++ P C +H +G S VQSQ+H D S
Sbjct: 862 LGNEAELLESMGDAPPPQDEHTTIIDRGPGACEESNHLLLNGGSHKHVQSQIHRSAD-SG 920
Query: 902 GGSARDQAEDPASSPTSKRKRVKFTTFTTLPSEELAYDSVP-AGEEDEEEEEDLGWGCPD 960
G R+Q +DP SPTSKRK+VKFTTFTT+P + DS P +ED+ W C D
Sbjct: 921 GRQGREQKQDPLHSPTSKRKKVKFTTFTTIPPD----DSCPTVNSIVSSNDEDIKWVCQD 976
Query: 961 VAGPTRPTAPPDLHNYMRRIKEIA 984
VA AP +L NY+ ++K+ A
Sbjct: 977 VA----VGAPKELRNYLEKLKDKA 996
Score = 72.4 bits (176), Expect = 2e-12
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 111 SSTLDIPERLTVNWKVRAFIVRSHVPASQPVVQVLFYVAGRDWDDFGVTERLPCVRLHAF 170
S+ L + + +WK++A I+R V S+P VQVLF++ GRDWDD G E+LPC+R+ AF
Sbjct: 4 SNFLGPTNKFSFDWKLKAHILRDKVYLSRPKVQVLFHIMGRDWDDHGAGEKLPCLRVFAF 63
Query: 171 RDARE 175
R+ RE
Sbjct: 64 RETRE 68
>gi|30089935 transmembrane protein 132A isoform a [Homo sapiens]
Length = 1024
Score = 404 bits (1039), Expect = e-112
Identities = 281/830 (33%), Positives = 413/830 (49%), Gaps = 67/830 (8%)
Query: 179 LRIGSISLFRPPPRRTLQEHRLDSNLMIRLPDRPLKPGEVLSILLYLAPNSSSPSSPSVE 238
L +G + L RP QE LD + +R+PD P++PG++ S L L N ++
Sbjct: 232 LPVGGVEL-RPADPPQYQEVPLDEAVTLRVPDMPVRPGQLFSATLLLRHNFTASL----- 285
Query: 239 HFTLRVKAKKGVTLLGTKSRSGQ---WHVTSELLTGAKHSTATVDVAWAQSTPLPPREGQ 295
TLR+K KKG+ + T +R Q W + G++H T + L +
Sbjct: 286 -LTLRIKVKKGLHV--TAARPAQPTLWTAKLDRFKGSRHHTTLIT---CHRAGLTEPDSS 339
Query: 296 GPLEI---LQLDFEMENFTSQ--SVKRRIMWHIDYRGHGALPDLERAVTELTVIQRDVQA 350
PLE+ L +DF +EN T +V R + W ++Y G + ++ V E+ V +RD++A
Sbjct: 340 SPLELSEFLWVDFVVENSTGGGVAVTRPVTWQLEYPGQAPEAEKDKMVWEILVSERDIRA 399
Query: 351 ILPLAMDTEIINTAILTGRTVAIPVKVIAIEVNGLVLDISALVECESDNEDIIKVSSSCD 410
++PLA E++NTA LTG +PV+++ ++ G +++++ V CES N +++VS +CD
Sbjct: 400 LIPLAKAEELVNTAPLTGVPQHVPVRLVTVDGGGALVEVTEHVGCESANTQVLQVSEACD 459
Query: 411 YVFVSGKESRGSMNARVTFRYDVLNAPLEMTVWVPKLPLHIELSDARLSQVKGWRVPILP 470
VFV+GKESRG+ RV F + L A L +TVW P LPL IEL+D L QV+GWRVP
Sbjct: 460 AVFVAGKESRGARGVRVDFWWRRLRASLRLTVWAPLLPLRIELTDTTLEQVRGWRVP--G 517
Query: 471 DRRSVRESEDEDEEEEERRQSASRGCTLQYQHATLQVFTQFHTTSSEGTDQVVTMLGPDW 530
E E +E ERR +RGC LQYQ A ++ F +G ++ +LGPDW
Sbjct: 518 PAEGPAEPAAEASDEAERR---ARGCHLQYQRAGVRFLAPFAAHPLDGGRRLTHLLGPDW 574
Query: 531 LVEVTDLVSDFMRVGDPRVAHMVDSSTLAGLEPGTTPFKVVSPLTEAVLGETLLTVTEEK 590
L++V+ LV+ RV D RVA + + G EPG T +V SPL++++LGE L VT++K
Sbjct: 575 LLDVSHLVAPHARVLDSRVASLEGGRVVVGREPGVTSIEVRSPLSDSILGEQALAVTDDK 634
Query: 591 VSITQLQAQVVASLALSLRPSPGSSHTILATTAAQQTLSFLKQEALLSLWLSYSDGTTAP 650
VS+ +L+ Q V ++L+L + AT AQ L KQE LSLWLS+SD T AP
Sbjct: 635 VSVLELRVQPVMGISLTLSRGTAHPGEVTATCWAQSALPAPKQEVALSLWLSFSDHTVAP 694
Query: 651 LSLYSPRDYGLLVSSLDEHVATVTQDRAFPL--VVAEAEGSGELLRAELTIAESCQKTKR 708
LY RD GL VS+ + +++ L VV+ A G L L E C++ +
Sbjct: 695 AELYDRRDLGLSVSAEEPGAILPAEEQGAQLGVVVSGAGAEGLPLHVALHPPEPCRRGRH 754
Query: 709 KSVLATTPVGLRVHFGRDEEDPTYDYPGPSQPGPGGGEDEARGAGPPGSALPAPEAPG-P 767
+ LA+ L + P P P+ P A A G A G
Sbjct: 755 RVPLASGTAWLGL--------PPASTPAPALPSSPAWSPPATEATMGGKRQVAGSVGGNT 806
Query: 768 GTASPVVPPTEDFLPLPT-----------GFLQVPRGLTDLEIGMYALLGVFCLAILVFL 816
G E+ T + P+ +T+LE+GMYALLGVFC+AI +FL
Sbjct: 807 GVRGKFERAEEEARKEETEAREEEEEEEEEMVPAPQHVTELELGMYALLGVFCVAIFIFL 866
Query: 817 INCIVFVLRYRHKRIPPEGQT--SMDHSHHWVFLGNGQPLRVQGELSPPAGNPLETVPAF 874
+N +VFVLRY+ K PP+ T + H+WV+LG Q + +L + P +
Sbjct: 867 VNGVVFVLRYQRKE-PPDSATDPTSPQPHNWVWLGTDQE-ELSRQLDRQSPGPPKG-EGS 923
Query: 875 CHGDHHSSGSSQTSVQSQVHGRGDGSSGGSARDQAEDPASSPTSKRKRVKFTTFTTLPSE 934
C + G + T G GG+ + +RKRV+F TF P
Sbjct: 924 CPCESGGGGEAPT--------LAPGPPGGTTSSSSTLARKEAGGRRKRVEFVTFAPAPPA 975
Query: 935 ELAYDSVPAGEEDE---EEEEDLGWGCPDVAGPTRPTAPPDLHNYMRRIK 981
+ + V A EED+ W C D+ P +L NYM RI+
Sbjct: 976 QSPEEPVGAPAVQSILVAGEEDIRWVCEDMG----LKDPEELRNYMERIR 1021
Score = 62.8 bits (151), Expect = 2e-09
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 69 ANSSLQ-RSEPFVVFQT--KELPVLNVSLGPFSTSQVVARELLQPSSTLDIPERLTVNWK 125
ANSSL RSE F++ Q + P+L S PF+T QVV + +P + V W
Sbjct: 70 ANSSLSSRSETFLLLQPWPRAQPLLRASYPPFATQQVVPPRVTEP-------HQRPVPWD 122
Query: 126 VRAFIVRSHVPASQPVVQVLFYVAGRDWDDFGVTERLPCVRLHAFRDA 173
VRA V + V ++P +VLF++ G+DW + LPC RLHA A
Sbjct: 123 VRAVSVEAAVTPAEPYARVLFHLKGQDWPP--GSGSLPCARLHATHPA 168
>gi|30089937 transmembrane protein 132A isoform b [Homo sapiens]
Length = 1023
Score = 403 bits (1036), Expect = e-112
Identities = 282/830 (33%), Positives = 413/830 (49%), Gaps = 68/830 (8%)
Query: 179 LRIGSISLFRPPPRRTLQEHRLDSNLMIRLPDRPLKPGEVLSILLYLAPNSSSPSSPSVE 238
L +G + L RP QE LD + +R+PD P++PG++ S L L N ++
Sbjct: 232 LPVGGVEL-RPADPPQYQEVPLDEAVTLRVPDMPVRPGQLFSATLLLRHNFTASL----- 285
Query: 239 HFTLRVKAKKGVTLLGTKSRSGQ---WHVTSELLTGAKHSTATVDVAWAQSTPLPPREGQ 295
TLR+K KKG+ + T +R Q W + G++H T + A T
Sbjct: 286 -LTLRIKVKKGLHV--TAARPAQPTLWTAKLDRFKGSRHHTTLITCHRAGLT----EPDS 338
Query: 296 GPLEI---LQLDFEMENFTSQ--SVKRRIMWHIDYRGHGALPDLERAVTELTVIQRDVQA 350
PLE+ L +DF +EN T +V R + W ++Y G + ++ V E+ V +RD++A
Sbjct: 339 SPLELSEFLWVDFVVENSTGGGVAVTRPVTWQLEYPGQAPEAEKDKMVWEILVSERDIRA 398
Query: 351 ILPLAMDTEIINTAILTGRTVAIPVKVIAIEVNGLVLDISALVECESDNEDIIKVSSSCD 410
++PLA E++NTA LTG +PV+++ ++ G +++++ V CES N +++VS +CD
Sbjct: 399 LIPLAKAEELVNTAPLTGVPQHVPVRLVTVDGGGALVEVTEHVGCESANTQVLQVSEACD 458
Query: 411 YVFVSGKESRGSMNARVTFRYDVLNAPLEMTVWVPKLPLHIELSDARLSQVKGWRVPILP 470
VFV+GKESRG+ RV F + L A L +TVW P LPL IEL+D L QV+GWRVP
Sbjct: 459 AVFVAGKESRGARGVRVDFWWRRLRASLRLTVWAPLLPLRIELTDTTLEQVRGWRVP--G 516
Query: 471 DRRSVRESEDEDEEEEERRQSASRGCTLQYQHATLQVFTQFHTTSSEGTDQVVTMLGPDW 530
E E +E ERR +RGC LQYQ A ++ F +G ++ +LGPDW
Sbjct: 517 PAEGPAEPAAEASDEAERR---ARGCHLQYQRAGVRFLAPFAAHPLDGGRRLTHLLGPDW 573
Query: 531 LVEVTDLVSDFMRVGDPRVAHMVDSSTLAGLEPGTTPFKVVSPLTEAVLGETLLTVTEEK 590
L++V+ LV+ RV D RVA + + G EPG T +V SPL++++LGE L VT++K
Sbjct: 574 LLDVSHLVAPHARVLDSRVASLEGGRVVVGREPGVTSIEVRSPLSDSILGEQALAVTDDK 633
Query: 591 VSITQLQAQVVASLALSLRPSPGSSHTILATTAAQQTLSFLKQEALLSLWLSYSDGTTAP 650
VS+ +L+ Q V ++L+L + AT AQ L KQE LSLWLS+SD T AP
Sbjct: 634 VSVLELRVQPVMGISLTLSRGTAHPGEVTATCWAQSALPAPKQEVALSLWLSFSDHTVAP 693
Query: 651 LSLYSPRDYGLLVSSLDEHVATVTQDRAFPL--VVAEAEGSGELLRAELTIAESCQKTKR 708
LY RD GL VS+ + +++ L VV+ A G L L E C++ +
Sbjct: 694 AELYDRRDLGLSVSAEEPGAILPAEEQGAQLGVVVSGAGAEGLPLHVALHPPEPCRRGRH 753
Query: 709 KSVLATTPVGLRVHFGRDEEDPTYDYPGPSQPGPGGGEDEARGAGPPGSALPAPEAPG-P 767
+ LA+ L + P P P+ P A A G A G
Sbjct: 754 RVPLASGTAWLGL--------PPASTPAPALPSSPAWSPPATEATMGGKRQVAGSVGGNT 805
Query: 768 GTASPVVPPTEDFLPLPT-----------GFLQVPRGLTDLEIGMYALLGVFCLAILVFL 816
G E+ T + P+ +T+LE+GMYALLGVFC+AI +FL
Sbjct: 806 GVRGKFERAEEEARKEETEAREEEEEEEEEMVPAPQHVTELELGMYALLGVFCVAIFIFL 865
Query: 817 INCIVFVLRYRHKRIPPEGQT--SMDHSHHWVFLGNGQPLRVQGELSPPAGNPLETVPAF 874
+N +VFVLRY+ K PP+ T + H+WV+LG Q + +L + P +
Sbjct: 866 VNGVVFVLRYQRKE-PPDSATDPTSPQPHNWVWLGTDQE-ELSRQLDRQSPGPPKG-EGS 922
Query: 875 CHGDHHSSGSSQTSVQSQVHGRGDGSSGGSARDQAEDPASSPTSKRKRVKFTTFTTLPSE 934
C + G + T G GG+ + +RKRV+F TF P
Sbjct: 923 CPCESGGGGEAPT--------LAPGPPGGTTSSSSTLARKEAGGRRKRVEFVTFAPAPPA 974
Query: 935 ELAYDSVPAGEEDE---EEEEDLGWGCPDVAGPTRPTAPPDLHNYMRRIK 981
+ + V A EED+ W C D+ P +L NYM RI+
Sbjct: 975 QSPEEPVGAPAVQSILVAGEEDIRWVCEDMG----LKDPEELRNYMERIR 1020
Score = 62.8 bits (151), Expect = 2e-09
Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 12/108 (11%)
Query: 69 ANSSLQ-RSEPFVVFQT--KELPVLNVSLGPFSTSQVVARELLQPSSTLDIPERLTVNWK 125
ANSSL RSE F++ Q + P+L S PF+T QVV + +P + V W
Sbjct: 70 ANSSLSSRSETFLLLQPWPRAQPLLRASYPPFATQQVVPPRVTEP-------HQRPVPWD 122
Query: 126 VRAFIVRSHVPASQPVVQVLFYVAGRDWDDFGVTERLPCVRLHAFRDA 173
VRA V + V ++P +VLF++ G+DW + LPC RLHA A
Sbjct: 123 VRAVSVEAAVTPAEPYARVLFHLKGQDWPP--GSGSLPCARLHATHPA 168
>gi|169205040 PREDICTED: similar to TMEM132B protein [Homo sapiens]
Length = 199
Score = 92.0 bits (227), Expect = 2e-18
Identities = 70/177 (39%), Positives = 93/177 (52%), Gaps = 10/177 (5%)
Query: 788 LQVPRGLTDLEIGMYALLGVFCLAILVFLINCIVFVLRYRHKRIPPEGQTSMDHSHHWVF 847
L RGL D EIGMYALL VF AILVFLINC+ F +YRHKR Q ++ HSH+WV+
Sbjct: 22 LVTSRGLRDFEIGMYALLYVFFPAILVFLINCVAFSWKYRHKRFAVSQQGNVPHSHNWVW 81
Query: 848 LGNGQPL---RVQGEL-SPPAGNPLETVPAFCHGDHHSSGSSQTSVQSQVHGRGDGSSGG 903
LGN L RV L S ++ F + +GS Q + SQ+ D
Sbjct: 82 LGNEVGLLENRVDITLPSEECTTMIDRGLQFEERNFLLNGSFQKTFHSQLFRLVDYV--- 138
Query: 904 SARDQAEDPASSPTSKRKRVKFTTF-TTLPSEELAYDSVPAGEEDEEE--EEDLGWG 957
++ +P +S KRKRVKFT++ T LP + Y + + D + ED+G G
Sbjct: 139 YEKEIKNEPMNSSGPKRKRVKFTSYITILPEDGSPYTNSILFDSDNIKCVCEDMGLG 195
>gi|169205620 PREDICTED: similar to TMEM132B protein [Homo sapiens]
Length = 199
Score = 92.0 bits (227), Expect = 2e-18
Identities = 70/177 (39%), Positives = 93/177 (52%), Gaps = 10/177 (5%)
Query: 788 LQVPRGLTDLEIGMYALLGVFCLAILVFLINCIVFVLRYRHKRIPPEGQTSMDHSHHWVF 847
L RGL D EIGMYALL VF AILVFLINC+ F +YRHKR Q ++ HSH+WV+
Sbjct: 22 LVTSRGLRDFEIGMYALLYVFFPAILVFLINCVAFSWKYRHKRFAVSQQGNVPHSHNWVW 81
Query: 848 LGNGQPL---RVQGEL-SPPAGNPLETVPAFCHGDHHSSGSSQTSVQSQVHGRGDGSSGG 903
LGN L RV L S ++ F + +GS Q + SQ+ D
Sbjct: 82 LGNEVGLLENRVDITLPSEECTTMIDRGLQFEERNFLLNGSFQKTFHSQLFRLVDYV--- 138
Query: 904 SARDQAEDPASSPTSKRKRVKFTTF-TTLPSEELAYDSVPAGEEDEEE--EEDLGWG 957
++ +P +S KRKRVKFT++ T LP + Y + + D + ED+G G
Sbjct: 139 YEKEIKNEPMNSSGPKRKRVKFTSYITILPEDGSPYTNSILFDSDNIKCVCEDMGLG 195
>gi|239744766 PREDICTED: hypothetical protein [Homo sapiens]
Length = 199
Score = 92.0 bits (227), Expect = 2e-18
Identities = 70/177 (39%), Positives = 93/177 (52%), Gaps = 10/177 (5%)
Query: 788 LQVPRGLTDLEIGMYALLGVFCLAILVFLINCIVFVLRYRHKRIPPEGQTSMDHSHHWVF 847
L RGL D EIGMYALL VF AILVFLINC+ F +YRHKR Q ++ HSH+WV+
Sbjct: 22 LVTSRGLRDFEIGMYALLYVFFPAILVFLINCVAFSWKYRHKRFAVSQQGNVPHSHNWVW 81
Query: 848 LGNGQPL---RVQGEL-SPPAGNPLETVPAFCHGDHHSSGSSQTSVQSQVHGRGDGSSGG 903
LGN L RV L S ++ F + +GS Q + SQ+ D
Sbjct: 82 LGNEVGLLENRVDITLPSEECTTMIDRGLQFEERNFLLNGSFQKTFHSQLFRLVDYV--- 138
Query: 904 SARDQAEDPASSPTSKRKRVKFTTF-TTLPSEELAYDSVPAGEEDEEE--EEDLGWG 957
++ +P +S KRKRVKFT++ T LP + Y + + D + ED+G G
Sbjct: 139 YEKEIKNEPMNSSGPKRKRVKFTSYITILPEDGSPYTNSILFDSDNIKCVCEDMGLG 195
>gi|21389357 MAPK-interacting and spindle-stabilizing protein [Homo
sapiens]
Length = 245
Score = 43.1 bits (100), Expect = 0.001
Identities = 23/55 (41%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Query: 730 PTYDYPGPSQPGPGGGEDEARGAGPPGSALPAPEAPGPGTASPVVPPTEDFLPLP 784
PT PGP P P G PPG PAP PGPG P P F LP
Sbjct: 77 PTGPPPGPPAPFPPSGPS----CPPPGGPYPAPTVPGPGPTGPYPTPNMPFPELP 127
Score = 30.8 bits (68), Expect = 6.5
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Query: 736 GPSQPGPGGGEDEARGAGP-PGSALPAPEAPGPGTASPVVPPTEDFLPLPTG 786
GPS P PGG GP P P P P P P PT+ P G
Sbjct: 92 GPSCPPPGGPYPAPTVPGPGPTGPYPTPNMPFPELPRPYGAPTDPAAAGPLG 143
Score = 30.8 bits (68), Expect = 6.5
Identities = 26/80 (32%), Positives = 28/80 (35%), Gaps = 22/80 (27%)
Query: 736 GPSQPGPGGGEDEARGAGP---PGSALPAPEAPG-----------PGTASPVVP------ 775
GP PG GG P P A P P+APG PG P P
Sbjct: 151 GPWAPGMGGQYPTPNMPYPSPGPYPAPPPPQAPGAAPPVPWGTVPPGAWGPPAPYPAPTG 210
Query: 776 --PTEDFLPLPTGFLQVPRG 793
PT P P+ QVP G
Sbjct: 211 SYPTPGLYPTPSNPFQVPSG 230
>gi|9558729 golgi associated, gamma adaptin ear containing, ARF
binding protein 1 isoform 1 [Homo sapiens]
Length = 639
Score = 42.4 bits (98), Expect = 0.002
Identities = 61/222 (27%), Positives = 88/222 (39%), Gaps = 28/222 (12%)
Query: 11 AALLCLSALLAHASGRSHPASPSPPGPQASPVLPVS--YRLSHTRLAFFLREARPPSPAV 68
+ALL LS L +G ++PA P+ PG QASP P + L ++ L + PPS
Sbjct: 317 SALLDLSGLDLPPAGTTYPAMPTRPGEQASPEQPSASVSLLDDELMSLGLSDPTPPSGPS 376
Query: 69 ANSSLQRSEPFVVFQTKELPVLNVSLGPFSTSQVVARELLQPSSTLDIPERLTVNWKVRA 128
+ + S F E P ++ P S+ A+ L SS LD + L +
Sbjct: 377 LDGTGWNS--FQSSDATEPPAPALAQAPSMESRPPAQTSLPASSGLDDLDLLG-----KT 429
Query: 129 FIVRSHVPASQPVVQVLFYVAGRDWDDFGVTERLPCVRLHAFRDAREHP------LLRIG 182
+ +S P SQ V W+ T RL L + P LL
Sbjct: 430 LLQQSLPPESQQV----------RWEKQQPTPRLTLRDLQNKSSSCSSPSSSATSLLHTV 479
Query: 183 SISLFRPPPRRTLQEHRLDSNLMIRLPDRPLKPGEVLSILLY 224
S RPP + E L S I +P +KP +L + +Y
Sbjct: 480 SPEPPRPPQQPVPTELSLAS---ITVPLESIKPSNILPVTVY 518
>gi|4507545 G protein-coupled receptor 137B [Homo sapiens]
Length = 399
Score = 40.4 bits (93), Expect = 0.008
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 755 PGSALPAPEAPGPGTASPVVPPTEDFLPLPTGFLQVPRGLTDLEIGMYALLGVFCLAILV 814
P P APGP P P D LP PT VP +++G+ + VF + V
Sbjct: 3 PERPRPRGSAPGPMETPPWDPARNDSLP-PTLTPAVP---PYVKLGLTVVYTVFYALLFV 58
Query: 815 FLINCIVFVLRYRHKRI 831
F+ + VLRYRHKR+
Sbjct: 59 FIYVQLWLVLRYRHKRL 75
>gi|13994287 BTE-binding protein 4 [Homo sapiens]
Length = 252
Score = 39.7 bits (91), Expect = 0.014
Identities = 28/85 (32%), Positives = 32/85 (37%), Gaps = 15/85 (17%)
Query: 697 LTIAESCQKTKRKSVLATTPVGLRVHFGRDEEDPTYDYPGPSQPGPGGGED------EAR 750
++ A +C VL G VH GR PGP GP G D EA
Sbjct: 1 MSAAVACVDYFAADVLMAISSGAVVHRGR---------PGPEGAGPAAGLDVRAARREAA 51
Query: 751 GAGPPGSALPAPEAPGPGTASPVVP 775
G PG P P A GPG + P
Sbjct: 52 SPGTPGPPPPPPAASGPGPGAAAAP 76
Score = 30.4 bits (67), Expect = 8.5
Identities = 27/82 (32%), Positives = 33/82 (40%), Gaps = 7/82 (8%)
Query: 3 PGMSGRGGAALLCLSALLAHASGRSHPASPSPPGPQASPVLPVSYRLSHTRLAFFLREAR 62
PG G G AA L + A A+ P P PP P AS P + H A L + R
Sbjct: 30 PGPEGAGPAAGLDVRAARREAASPGTPGPPPPP-PAASGPGPGAAAAPHLLAASILADLR 88
Query: 63 ------PPSPAVANSSLQRSEP 78
P + A+SS S P
Sbjct: 89 GGPGAAPGGASPASSSSAASSP 110
>gi|6631102 protocadherin 8 isoform 1 precursor [Homo sapiens]
Length = 1070
Score = 39.7 bits (91), Expect = 0.014
Identities = 43/148 (29%), Positives = 59/148 (39%), Gaps = 26/148 (17%)
Query: 646 GTTAPLSLYSPRDYGLLVSSLDEHVATVTQDRAFPLVVAEAEGSGELLRAELTIAESCQK 705
G AP S SP S L + + D +++ A LL A + IA +C +
Sbjct: 717 GPAAPASAGSPERSRPPGSRLGVSGSVLQWDTPLIVIIVLAGSCTLLLAAIIAIATTCNR 776
Query: 706 TKRKSVLATTPVGLRVHFGRDEEDPTYDYPGPSQPGPGGGEDEARGAGP----------P 755
K++ +R EE P G S PG E+ ARGAGP P
Sbjct: 777 RKKE---------VRKGGALREERPGAAGGGAS--APGSPEEAARGAGPRPNMFDVLTFP 825
Query: 756 GS-----ALPAPEAPGPGTASPVVPPTE 778
G+ PA +AP P A+ VP +E
Sbjct: 826 GTGKAPFGSPAADAPPPAVAAAEVPGSE 853
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 39.3 bits (90), Expect = 0.018
Identities = 66/271 (24%), Positives = 105/271 (38%), Gaps = 36/271 (13%)
Query: 543 RVGDPRVAHMVDSSTLAGLEPGTTPFKVVSPL-TEAVLGETLLTVTEEKVSITQ-LQAQV 600
+VG H SS L P + K S + T +++G+T ++ +S T+ +Q++
Sbjct: 7481 KVGTSSSGHESPSSVL----PDSETTKATSAMGTISIMGDTSVSTLTPALSNTRKIQSEP 7536
Query: 601 VASLALSLRPSPGSSHTILATTAAQQTLSFLKQEALLSLWLSYSDGTTAPLSLYSPRDYG 660
+SL LR + S T LAT A +LS S G T +S +
Sbjct: 7537 ASSLTTRLRETSTSEETSLATEA----------NTVLS---KVSTGATTEVSRTEAISFS 7583
Query: 661 LLVSSLDEHVATVTQDRAFPLVVAEAEGSGELLRAELTI------AESCQKTKRKSVLAT 714
S E +T++QD + + + S A++TI +ES ++ AT
Sbjct: 7584 RTSMSGPEQ-STMSQDISIGTIPRISASSVLTESAKMTITTQTGPSESTLESTLNLNTAT 7642
Query: 715 TPVGLRVHFGRDEEDPTYDYPGPSQPGPGG----GEDEARGAGPPGSALPAPEAPGPGTA 770
TP + H + P + GPGG + PP S L P P
Sbjct: 7643 TPSWVETHSIVIQGFPHPEMTTSMGRGPGGVSWPSPPFVKETSPPSSPLSLPAVTSPHPV 7702
Query: 771 SPV----VPPTEDFLPLPTGFLQVPRGLTDL 797
S +PP+ LP+ + P TD+
Sbjct: 7703 STTFLAHIPPSP--LPVTSLLTSGPATTTDI 7731
>gi|123173757 RAVER1 [Homo sapiens]
Length = 756
Score = 39.3 bits (90), Expect = 0.018
Identities = 22/49 (44%), Positives = 26/49 (53%)
Query: 737 PSQPGPGGGEDEARGAGPPGSALPAPEAPGPGTASPVVPPTEDFLPLPT 785
PS GP GG+ EA G GPP + L P AP S + +D PLPT
Sbjct: 457 PSVLGPAGGDREALGLGPPAAQLTPPPAPVGLRGSGLRGLQKDSGPLPT 505
>gi|58761544 amine oxidase (flavin containing) domain 2 isoform a
[Homo sapiens]
Length = 876
Score = 38.9 bits (89), Expect = 0.024
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 736 GPSQPGPGG-GEDEARGAGPPGSALPAPEAPGPGTASPVVPPT---EDFLPLPTGFLQVP 791
GP++ GPG GE R PP ++ P A PG+A P PT P+ TG + P
Sbjct: 46 GPAEVGPGAVGERTPRKKEPPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETP 105
Query: 792 RG 793
G
Sbjct: 106 EG 107
>gi|58761546 amine oxidase (flavin containing) domain 2 isoform b
[Homo sapiens]
Length = 852
Score = 38.9 bits (89), Expect = 0.024
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 736 GPSQPGPGG-GEDEARGAGPPGSALPAPEAPGPGTASPVVPPT---EDFLPLPTGFLQVP 791
GP++ GPG GE R PP ++ P A PG+A P PT P+ TG + P
Sbjct: 46 GPAEVGPGAVGERTPRKKEPPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETP 105
Query: 792 RG 793
G
Sbjct: 106 EG 107
>gi|19924103 synapsin II isoform IIa [Homo sapiens]
Length = 582
Score = 38.1 bits (87), Expect = 0.041
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 6/103 (5%)
Query: 676 DRAFPLVVAEAEGSGELLRAELTIAESCQKTKRKSVLATT-PVGLRVHFGRDEEDPTYDY 734
D + PL+ E + L EL I++ Q R L+ P+ + +DP
Sbjct: 389 DCSMPLI-GEHQVEDRQLITELVISKMNQLLSRTPALSPQRPLTTQQPQSGTLKDPDSSK 447
Query: 735 PGPSQPGPGGGEDEARGAGPPGSALPAPEAPGPGTASPVVPPT 777
P +P P GG + +G PPG LP P PG P +PP+
Sbjct: 448 TPPQRPPPQGGPGQPQGMQPPGKVLPPRRLP-PG---PSLPPS 486
Score = 31.2 bits (69), Expect = 5.0
Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 7/67 (10%)
Query: 710 SVLATTPVGLRVHFGRDEEDPTYDYPGPSQPGPGGGEDEARGAGPPGSALPAPEAPGPGT 769
S +A P G R E P P PGPG A + P +A P PE P
Sbjct: 13 SFIANLPNGYMTDLQRPEPQQP---PPPPPPGPGA----ASASAAPPTASPGPERRPPPA 65
Query: 770 ASPVVPP 776
++P P
Sbjct: 66 SAPAPQP 72
>gi|209969686 GRAM domain containing 1A isoform 2 [Homo sapiens]
Length = 713
Score = 38.1 bits (87), Expect = 0.041
Identities = 28/105 (26%), Positives = 39/105 (37%), Gaps = 1/105 (0%)
Query: 859 ELSPPAGNPLETVPAFCHGDHHSSGSSQTSVQSQVHGRGDGSSGGSARDQAEDPASSPTS 918
E SP P + ++ + QV + D SS + AE P++ PT
Sbjct: 258 EPSPVGSRRGHVTPNLSRASSDADHGAEEDKEEQVDSQPDASSSQTVTPVAEPPSTEPTQ 317
Query: 919 KRKRVKFTTFTTLPSEELAYDSVPAGEEDEEEEEDLGWGCPDVAG 963
LPSEEL D+ EE DL PD++G
Sbjct: 318 PDGPTTLGPLDLLPSEELLTDT-SNSSSSTGEEADLAALLPDLSG 361
>gi|92110010 GRAM domain containing 1A isoform 1 [Homo sapiens]
Length = 724
Score = 38.1 bits (87), Expect = 0.041
Identities = 28/105 (26%), Positives = 39/105 (37%), Gaps = 1/105 (0%)
Query: 859 ELSPPAGNPLETVPAFCHGDHHSSGSSQTSVQSQVHGRGDGSSGGSARDQAEDPASSPTS 918
E SP P + ++ + QV + D SS + AE P++ PT
Sbjct: 265 EPSPVGSRRGHVTPNLSRASSDADHGAEEDKEEQVDSQPDASSSQTVTPVAEPPSTEPTQ 324
Query: 919 KRKRVKFTTFTTLPSEELAYDSVPAGEEDEEEEEDLGWGCPDVAG 963
LPSEEL D+ EE DL PD++G
Sbjct: 325 PDGPTTLGPLDLLPSEELLTDT-SNSSSSTGEEADLAALLPDLSG 368
>gi|21237808 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform b [Homo sapiens]
Length = 1130
Score = 37.7 bits (86), Expect = 0.053
Identities = 22/50 (44%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Query: 730 PTYDYPGPSQPG--PGGGEDEARGAGPPGSALPA-PEAPGPGTASPVVPP 776
P P PG PG G G PG+ LP P AP PGT +PV PP
Sbjct: 1083 PNQQTPPSMMPGAVPGSGHP---GVADPGTPLPPDPTAPSPGTVTPVPPP 1129
>gi|62945417 dystrophia myotonica-containing WD repeat motif protein
[Homo sapiens]
Length = 674
Score = 37.7 bits (86), Expect = 0.053
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 735 PGPSQPGPGGGEDEARGAGPPGSALPAPEAPGPGTASPVV 774
P P QP PG GA P S+ P P PGPG A P V
Sbjct: 56 PQPPQPPPGPASASGPGAAGPASS-PPPAGPGPGPALPAV 94
>gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo
sapiens]
Length = 1691
Score = 37.4 bits (85), Expect = 0.070
Identities = 29/73 (39%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Query: 735 PGP-SQPGPGGGEDEARGAGPPGSALPAPE----APG-PGTASPVVPPTEDFLPLPTGFL 788
PGP QPG G E GPPG +P P +PG PG P+ PP LP G
Sbjct: 830 PGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGAS 889
Query: 789 QVPRGLTDLEIGM 801
P T E+GM
Sbjct: 890 GFPG--TKGEMGM 900
Score = 36.2 bits (82), Expect = 0.16
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 14/64 (21%)
Query: 735 PGPSQPGPGGGEDEARGAGPPGSALPAPE-------APG----PGTASPVVPPTEDFL-P 782
PGP PG G + GPPG ++P P APG PG A P +PP+++ P
Sbjct: 396 PGP--PGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEP 453
Query: 783 LPTG 786
P G
Sbjct: 454 GPPG 457
Score = 34.7 bits (78), Expect = 0.45
Identities = 25/58 (43%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 735 PGPS-QPGPGGGEDEARGAGPPGSALPAPEAPGPGTASPVVPPTEDFLPLPTGFLQVP 791
PGP +PG G GPPGS PA E P G P PP P PTGF +P
Sbjct: 1219 PGPKGEPGFHGFPGVQGPPGPPGSPGPALEGP-KGNPGPQGPPGR---PGPTGFQGLP 1272
>gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo
sapiens]
Length = 1685
Score = 37.4 bits (85), Expect = 0.070
Identities = 29/73 (39%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Query: 735 PGP-SQPGPGGGEDEARGAGPPGSALPAPE----APG-PGTASPVVPPTEDFLPLPTGFL 788
PGP QPG G E GPPG +P P +PG PG P+ PP LP G
Sbjct: 830 PGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGAS 889
Query: 789 QVPRGLTDLEIGM 801
P T E+GM
Sbjct: 890 GFPG--TKGEMGM 900
Score = 36.2 bits (82), Expect = 0.16
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 14/64 (21%)
Query: 735 PGPSQPGPGGGEDEARGAGPPGSALPAPE-------APG----PGTASPVVPPTEDFL-P 782
PGP PG G + GPPG ++P P APG PG A P +PP+++ P
Sbjct: 396 PGP--PGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEP 453
Query: 783 LPTG 786
P G
Sbjct: 454 GPPG 457
Score = 33.9 bits (76), Expect = 0.77
Identities = 23/53 (43%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 735 PGPS-QPGPGGGEDEARGAGPPGSALPAPEAPGPGTASPVVPPTEDFLPLPTG 786
PGP +PG G GPPGS PA E P G P PP LP P G
Sbjct: 1219 PGPKGEPGFHGFPGVQGPPGPPGSPGPALEGP-KGNPGPQGPPGRPGLPGPEG 1270
>gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo
sapiens]
Length = 1688
Score = 37.4 bits (85), Expect = 0.070
Identities = 29/73 (39%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Query: 735 PGP-SQPGPGGGEDEARGAGPPGSALPAPE----APG-PGTASPVVPPTEDFLPLPTGFL 788
PGP QPG G E GPPG +P P +PG PG P+ PP LP G
Sbjct: 830 PGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGSPGLPGKAGAS 889
Query: 789 QVPRGLTDLEIGM 801
P T E+GM
Sbjct: 890 GFPG--TKGEMGM 900
Score = 36.2 bits (82), Expect = 0.16
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 14/64 (21%)
Query: 735 PGPSQPGPGGGEDEARGAGPPGSALPAPE-------APG----PGTASPVVPPTEDFL-P 782
PGP PG G + GPPG ++P P APG PG A P +PP+++ P
Sbjct: 396 PGP--PGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEP 453
Query: 783 LPTG 786
P G
Sbjct: 454 GPPG 457
Score = 32.0 bits (71), Expect = 2.9
Identities = 23/55 (41%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Query: 735 PGPS-QPGPGGGEDEARGAGPPGSALPAPEAP--GPGTASPVVPPTEDFLPLPTG 786
PGP +PG G GPPGS PA E P PG P P LP P G
Sbjct: 1219 PGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGFQGLPGPEG 1273
>gi|24308326 BR serine/threonine kinase 1 [Homo sapiens]
Length = 778
Score = 37.4 bits (85), Expect = 0.070
Identities = 31/107 (28%), Positives = 43/107 (40%), Gaps = 9/107 (8%)
Query: 681 LVVAEAEGSGELLRAELTIAESCQKTKRKSVLATTPVGLRVHFGRDEEDPTYDYPGPSQP 740
L + +A G G + + E Q ++R ++ GL P + + P
Sbjct: 403 LSITDAGGGGSPVPTRRAL-EMAQHSQRSRSVSGASTGLSSSPLSSPRSPVFSF----SP 457
Query: 741 GPGGGEDEARGAGPPGS---ALPAPEAPGPGTASPVVPPTEDFLPLP 784
PG G DEARG G P S LP+ G G PP+ PLP
Sbjct: 458 EPGAG-DEARGGGSPTSKTQTLPSRGPRGGGAGEQPPPPSARSTPLP 503
>gi|239743776 PREDICTED: hypothetical protein XP_002344295 [Homo
sapiens]
Length = 109
Score = 37.0 bits (84), Expect = 0.091
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 735 PGPSQPGPGGGEDEARGAGPPGSALPAPEAPGPGTASPVVPPTEDFLPLPTGFLQ 789
PG S PGPG P ++P+P GPG +P P +DF P G +Q
Sbjct: 14 PGFSTPGPG--------TPVPTGSVPSPSGSGPGATAPCRPLFKDFGPPTVGCMQ 60
>gi|44890065 hypothetical protein LOC6936 [Homo sapiens]
Length = 781
Score = 36.6 bits (83), Expect = 0.12
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 900 SSGGSARDQAEDPASSPTSKRKRVKFTTFTTLPSEELAYDSVPAGEEDEEEEED 953
S G R+ +DP S P KR+ FT + +A +S+ EE EE ++
Sbjct: 166 SISGMKRESEDDPESEPDDHEKRIPFTLRPQTLRQRMAEESISRNEETSEESQE 219
>gi|134142824 forkhead box D2 [Homo sapiens]
Length = 495
Score = 36.6 bits (83), Expect = 0.12
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 742 PGGGEDEARGAGPPGSALPAPEAPGPGTASPVVPPTEDFLPLPT-GFLQVPR 792
PG G ARGA PG P P + G T SP+V P ++ L T LQ P+
Sbjct: 97 PGPGAAAARGAAGPG---PGPPSGGAATRSPLVKPPYSYIALITMAILQSPK 145
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,097,721
Number of Sequences: 37866
Number of extensions: 2492416
Number of successful extensions: 23096
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 334
Number of HSP's that attempted gapping in prelim test: 19365
Number of HSP's gapped (non-prelim): 3891
length of query: 984
length of database: 18,247,518
effective HSP length: 112
effective length of query: 872
effective length of database: 14,006,526
effective search space: 12213690672
effective search space used: 12213690672
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.