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Search of human proteins with 46559747
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46559747 hypothetical protein LOC399947 [Homo sapiens]
(197 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46559747 hypothetical protein LOC399947 [Homo sapiens] 401 e-112
gi|38327632 discoidin domain receptor family, member 1 isoform b... 42 3e-04
gi|83977452 discoidin domain receptor family, member 1 isoform c... 41 6e-04
gi|83977450 discoidin domain receptor family, member 1 isoform a... 41 6e-04
gi|4501915 ADAM metallopeptidase domain 9 isoform 1 precursor [H... 41 8e-04
gi|150378503 leiomodin 2 (cardiac) [Homo sapiens] 40 0.001
gi|4507831 Unc-51-like kinase 1 [Homo sapiens] 39 0.003
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 39 0.004
gi|17511435 roundabout homolog 4, magic roundabout [Homo sapiens] 39 0.004
gi|239757099 PREDICTED: hypothetical protein [Homo sapiens] 38 0.005
gi|239751605 PREDICTED: hypothetical protein XP_002347934 [Homo ... 38 0.005
gi|239746122 PREDICTED: hypothetical protein XP_002344202 [Homo ... 38 0.005
gi|46909596 a disintegrin and metalloproteinase domain 15 isofor... 38 0.006
gi|194578898 hypothetical protein LOC100170841 [Homo sapiens] 38 0.006
gi|116812565 zinc finger protein, subfamily 1A, 5 [Homo sapiens] 38 0.006
gi|28178843 TG-interacting factor isoform a [Homo sapiens] 37 0.008
gi|112380630 leiomodin 1 (smooth muscle) [Homo sapiens] 37 0.008
gi|41152235 ubiquitin specific protease 51 [Homo sapiens] 37 0.014
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 36 0.024
gi|109689723 abl interactor 2 [Homo sapiens] 36 0.024
gi|153792074 proline rich 12 [Homo sapiens] 36 0.024
gi|55741655 anoctamin 8 [Homo sapiens] 35 0.032
gi|239752764 PREDICTED: hypothetical protein [Homo sapiens] 35 0.032
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 35 0.032
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 35 0.032
gi|186700625 Rab-like GTP-binding protein 1 isoform 2 [Homo sapi... 35 0.041
gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo sapi... 35 0.041
gi|18079216 CASK interacting protein 1 [Homo sapiens] 35 0.041
gi|56549694 enabled homolog isoform a [Homo sapiens] 35 0.041
gi|39930375 enabled homolog isoform b [Homo sapiens] 35 0.041
>gi|46559747 hypothetical protein LOC399947 [Homo sapiens]
Length = 197
Score = 401 bits (1031), Expect = e-112
Identities = 197/197 (100%), Positives = 197/197 (100%)
Query: 1 MSARAPKELRLALPPCLLNRTFASPNASGSGNTGARGPGAVGSGTCITQVGQQLFQSFSS 60
MSARAPKELRLALPPCLLNRTFASPNASGSGNTGARGPGAVGSGTCITQVGQQLFQSFSS
Sbjct: 1 MSARAPKELRLALPPCLLNRTFASPNASGSGNTGARGPGAVGSGTCITQVGQQLFQSFSS 60
Query: 61 TLVLIVLVTVIFCLIVLSLSTFHIHKRRMKKRKMQRAQEEYERDHCSGSRGGGGLPRPGR 120
TLVLIVLVTVIFCLIVLSLSTFHIHKRRMKKRKMQRAQEEYERDHCSGSRGGGGLPRPGR
Sbjct: 61 TLVLIVLVTVIFCLIVLSLSTFHIHKRRMKKRKMQRAQEEYERDHCSGSRGGGGLPRPGR 120
Query: 121 QAPTHAKETRLERQPRDSPFCAPSNASSLSSSSPGLPCQGPCAPPPPPPASSPQGAHAAS 180
QAPTHAKETRLERQPRDSPFCAPSNASSLSSSSPGLPCQGPCAPPPPPPASSPQGAHAAS
Sbjct: 121 QAPTHAKETRLERQPRDSPFCAPSNASSLSSSSPGLPCQGPCAPPPPPPASSPQGAHAAS 180
Query: 181 SCLDTAGEGLLQTVVLS 197
SCLDTAGEGLLQTVVLS
Sbjct: 181 SCLDTAGEGLLQTVVLS 197
>gi|38327632 discoidin domain receptor family, member 1 isoform b
[Homo sapiens]
Length = 876
Score = 42.0 bits (97), Expect = 3e-04
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 16/129 (12%)
Query: 59 SSTLVLI--VLVTVIFCLIVLSLSTFHIHKRRMKKRKMQRAQEEYERDHCSGSRGGGGL- 115
S T +LI ++ ++ L++++L + +H RR+ + +R EE H S G +
Sbjct: 414 SPTAILIGCLVAIILLLLLIIALMLWRLHWRRLLSKAERRVLEEELTVHLSVP--GDTIL 471
Query: 116 --PRPGRQAPTHAKETRLERQPRDSPFCAPSNAS----SLSSSSPGLPCQGPCAPPPPPP 169
RPG + P +E R P S C P+ ++ + PG P PPPP
Sbjct: 472 INNRPGPREPPPYQEPRPRGNPPHSAPCVPNGSAYSGDYMEPEKPGAPLL-----PPPPQ 526
Query: 170 ASSPQGAHA 178
S P A A
Sbjct: 527 NSVPHYAEA 535
>gi|83977452 discoidin domain receptor family, member 1 isoform c
[Homo sapiens]
Length = 919
Score = 41.2 bits (95), Expect = 6e-04
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 15/134 (11%)
Query: 59 SSTLVLI--VLVTVIFCLIVLSLSTFHIHKRRMKKRKMQRAQEEYERDHCSGSRGGGGL- 115
S T +LI ++ ++ L++++L + +H RR+ + +R EE H S G +
Sbjct: 414 SPTAILIGCLVAIILLLLLIIALMLWRLHWRRLLSKAERRVLEEELTVHLSVP--GDTIL 471
Query: 116 --PRPGRQAPTHAKETRLERQPRDSPFCAPSNASSLSSSSPGLP------CQGPCAPPPP 167
RPG + P +E R P S C P N S+L S+P + P P PP
Sbjct: 472 INNRPGPREPPPYQEPRPRGNPPHSAPCVP-NGSALLLSNPAYRLLLATYARPPRGPGPP 530
Query: 168 PPA-SSPQGAHAAS 180
PA + P A S
Sbjct: 531 TPAWAKPTNTQAYS 544
>gi|83977450 discoidin domain receptor family, member 1 isoform a
[Homo sapiens]
Length = 913
Score = 41.2 bits (95), Expect = 6e-04
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 15/134 (11%)
Query: 59 SSTLVLI--VLVTVIFCLIVLSLSTFHIHKRRMKKRKMQRAQEEYERDHCSGSRGGGGL- 115
S T +LI ++ ++ L++++L + +H RR+ + +R EE H S G +
Sbjct: 414 SPTAILIGCLVAIILLLLLIIALMLWRLHWRRLLSKAERRVLEEELTVHLSVP--GDTIL 471
Query: 116 --PRPGRQAPTHAKETRLERQPRDSPFCAPSNASSLSSSSPGLP------CQGPCAPPPP 167
RPG + P +E R P S C P N S+L S+P + P P PP
Sbjct: 472 INNRPGPREPPPYQEPRPRGNPPHSAPCVP-NGSALLLSNPAYRLLLATYARPPRGPGPP 530
Query: 168 PPA-SSPQGAHAAS 180
PA + P A S
Sbjct: 531 TPAWAKPTNTQAYS 544
>gi|4501915 ADAM metallopeptidase domain 9 isoform 1 precursor [Homo
sapiens]
Length = 819
Score = 40.8 bits (94), Expect = 8e-04
Identities = 39/160 (24%), Positives = 61/160 (38%), Gaps = 20/160 (12%)
Query: 16 CLLNRTFASPNASGSGNTGARGPGAVGSGTCITQVGQQLFQSFSSTLVLIVLVTVIFCLI 75
C +A PN G G+ V SG ++ L + ++V +I C I
Sbjct: 662 CHCENGWAPPNCETKGYGGS-----VDSGPTYNEMNTALRDGL--LVFFFLIVPLIVCAI 714
Query: 76 VLSLSTFHIHKRRMKKRKMQRAQEEYERDHCSGSRGGGGLPRPGRQAPTHAKETRLERQP 135
+ + + + +K++ Q YE D G P RQ + + P
Sbjct: 715 FIFIKRDQLWRSYFRKKRSQT----YESD-------GKNQANPSRQPGSVPRHVSPVTPP 763
Query: 136 RDSPFCAPSNASSLSSSSPGLPCQGPCAPPPPPPASSPQG 175
R+ P A N ++ + + P Q P PPPP P S QG
Sbjct: 764 REVPIYA--NRFAVPTYAAKQPQQFPSRPPPPQPKVSSQG 801
>gi|150378503 leiomodin 2 (cardiac) [Homo sapiens]
Length = 547
Score = 40.4 bits (93), Expect = 0.001
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Query: 79 LSTFHIHKRRMKKRKMQRAQEEYERDHCSGSRGGGGLPRPGRQAPTHAKETRLERQPRDS 138
+S I R M K++ +R QE+ +++ G GG L Q T + + PR S
Sbjct: 342 MSMTSILTRNMDKQRQKRLQEQKQQE---GYDGGPNLRTKVWQRGTPSSSPYVS--PRHS 396
Query: 139 PFCAPSNASSLSS--SSPGLPCQGPCAPPPPPPASSP 173
P+ +P + + S P P P PPPPPP P
Sbjct: 397 PWSSPKLPKKVQTVRSRPLSPVATPPPPPPPPPPPPP 433
>gi|4507831 Unc-51-like kinase 1 [Homo sapiens]
Length = 1050
Score = 38.9 bits (89), Expect = 0.003
Identities = 31/85 (36%), Positives = 35/85 (41%), Gaps = 19/85 (22%)
Query: 112 GGGLPRPGRQAPTHAKET-----RLERQPRDSPFCAPSNASSLSSSSPGLPCQGPCAPP- 165
GG PRPG AP H+ T RL P N S L P LP + P P
Sbjct: 530 GGRSPRPGSSAPEHSPRTSGLGCRLHSAP---------NLSDLHVVRPKLP-KPPTDPLG 579
Query: 166 ---PPPPASSPQGAHAASSCLDTAG 187
PP AS PQ +H SC + G
Sbjct: 580 AVFSPPQASPPQPSHGLQSCRNLRG 604
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 38.5 bits (88), Expect = 0.004
Identities = 29/81 (35%), Positives = 33/81 (40%), Gaps = 14/81 (17%)
Query: 109 SRGGGGLPRPGRQAPTHAKETRLERQP----------RDSPFCAPSNASSLSSSSPGLPC 158
+RG G P P +APT A +P R P P+ SS S P P
Sbjct: 304 ARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPP 363
Query: 159 Q----GPCAPPPPPPASSPQG 175
GP APPPPPP P G
Sbjct: 364 SVLGVGPVAPPPPPPPPPPPG 384
Score = 28.9 bits (63), Expect = 3.0
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 154 PGLPCQGPCAPPPPPPASSPQGA 176
P P + P A PPPPP S P A
Sbjct: 311 PPPPSRAPTAAPPPPPPSRPSVA 333
Score = 27.3 bits (59), Expect = 8.6
Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 11/57 (19%)
Query: 120 RQAPTHAKETRLERQPRDSPFCAPSNASSLSSSSPGLPCQGPCAPPPPP---PASSP 173
RQAP +R P P P N S P P +G APPPPP P ++P
Sbjct: 274 RQAPPPPPPSRGGPPPPPPP---PHN-----SGPPPPPARGRGAPPPPPSRAPTAAP 322
>gi|17511435 roundabout homolog 4, magic roundabout [Homo sapiens]
Length = 1007
Score = 38.5 bits (88), Expect = 0.004
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 122 APTHAKETRLERQPRDSPFCAPSNASSLSSSSPGLPCQGPCAPPPPPPAS----SPQGAH 177
AP ET + + P AP SS+ + +P PC+PP P +S SP +
Sbjct: 717 APLFPHETPPTQSQQTQPPVAPQAPSSILLPAAPIPILSPCSPPSPQASSLSGPSPASSR 776
Query: 178 AASSCLDTAGE 188
+SS L + GE
Sbjct: 777 LSSSSLSSLGE 787
>gi|239757099 PREDICTED: hypothetical protein [Homo sapiens]
Length = 208
Score = 38.1 bits (87), Expect = 0.005
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 108 GSRGGGGLPRPGRQAPTHAKETRLERQPRDSPFCAPSNASSLSSSSPGLPCQGPCAPPPP 167
G RG PRP +A HA RL SP P + L+ + LP G PP
Sbjct: 71 GERGPEASPRPAPRARAHAHSRRLPA----SPTGPPETRARLAWAPRFLPTNGRRPSPPR 126
Query: 168 PPASSP 173
PP S+P
Sbjct: 127 PPMSAP 132
>gi|239751605 PREDICTED: hypothetical protein XP_002347934 [Homo
sapiens]
Length = 208
Score = 38.1 bits (87), Expect = 0.005
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 108 GSRGGGGLPRPGRQAPTHAKETRLERQPRDSPFCAPSNASSLSSSSPGLPCQGPCAPPPP 167
G RG PRP +A HA RL SP P + L+ + LP G PP
Sbjct: 71 GERGPEASPRPAPRARAHAHSRRLPA----SPTGPPETRARLAWAPRFLPTNGRRPSPPR 126
Query: 168 PPASSP 173
PP S+P
Sbjct: 127 PPMSAP 132
>gi|239746122 PREDICTED: hypothetical protein XP_002344202 [Homo
sapiens]
Length = 208
Score = 38.1 bits (87), Expect = 0.005
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 108 GSRGGGGLPRPGRQAPTHAKETRLERQPRDSPFCAPSNASSLSSSSPGLPCQGPCAPPPP 167
G RG PRP +A HA RL SP P + L+ + LP G PP
Sbjct: 71 GERGPEASPRPAPRARAHAHSRRLPA----SPTGPPETRARLAWAPRFLPTNGRRPSPPR 126
Query: 168 PPASSP 173
PP S+P
Sbjct: 127 PPMSAP 132
>gi|46909596 a disintegrin and metalloproteinase domain 15 isoform 4
preproprotein [Homo sapiens]
Length = 838
Score = 37.7 bits (86), Expect = 0.006
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 59 SSTLVLIVLVTVIFCLIVLSLSTFHIHKRRMKKRKMQRAQEEYERDHCSGSRGGGGLPRP 118
+S+L +L++++ L+++ L + ++ R+ +R Q + + + G P P
Sbjct: 691 TSSLTTGLLLSLLVLLVLVMLGASYWYRARLHQRLCQLKGPTCQ--YRAAQSGPSERPGP 748
Query: 119 GRQAPTHAKETRLERQPRDSPFCAPSNASSLSSSSPGLPCQGPCAPPPP--PPASSPQGA 176
++A A+ T+ E R +P P A + S QGP PPPP P + PQG
Sbjct: 749 PQRALL-ARGTKAELADRPNPPTRPLPADPVVRSPKS---QGPAKPPPPRKPLPADPQG- 803
Query: 177 HAASSCLDTAGEGLLQTVVLS 197
S L G G+ VV S
Sbjct: 804 RCPSGDLPGPGAGIPPLVVPS 824
>gi|194578898 hypothetical protein LOC100170841 [Homo sapiens]
Length = 379
Score = 37.7 bits (86), Expect = 0.006
Identities = 29/80 (36%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 111 GGGGLPRPGRQAPTHAKETRLERQPRDSPFCAPSNASSLSSSSPGL-PCQGPCAPPPPPP 169
GGGG P G ++ PR+S S AS+ +PGL P +GP A PP P
Sbjct: 122 GGGGFPHFGVRSCAPPGRCPAPPHPRES---TTSFASAPPRPAPGLEPQRGPAASPPQEP 178
Query: 170 ASSPQGAHAASSCLDTAGEG 189
+S P A S + AG G
Sbjct: 179 SSRPPSPPAGLS-TEPAGPG 197
>gi|116812565 zinc finger protein, subfamily 1A, 5 [Homo sapiens]
Length = 419
Score = 37.7 bits (86), Expect = 0.006
Identities = 21/77 (27%), Positives = 30/77 (38%)
Query: 118 PGRQAPTHAKETRLERQPRDSPFCAPSNASSLSSSSPGLPCQGPCAPPPPPPASSPQGAH 177
P +PT + Q SP PS+ S +S+P + P P P P PQ H
Sbjct: 305 PQSSSPTSPEPRPSHSQRNYSPVAGPSSEPSAHTSTPSIGNSQPSTPAPALPVQDPQLLH 364
Query: 178 AASSCLDTAGEGLLQTV 194
C + +L T+
Sbjct: 365 HCQHCDMYFADNILYTI 381
>gi|28178843 TG-interacting factor isoform a [Homo sapiens]
Length = 401
Score = 37.4 bits (85), Expect = 0.008
Identities = 30/78 (38%), Positives = 35/78 (44%), Gaps = 11/78 (14%)
Query: 105 HCSGSRGGGG--LPRPGRQA--PTHAKETRLERQPRDS----PFCAPSNASSLSSSSPGL 156
HCSGS GGG P P P + T PR S + P+ SSL++ S L
Sbjct: 16 HCSGSGGGGSDSFPWPASHPGNPQCSFSTAFLASPRLSRGTLAYLPPAPWSSLATPSALL 75
Query: 157 PCQGPCAPPPPPPASSPQ 174
G PPPPPA PQ
Sbjct: 76 ---GSSCAPPPPPARCPQ 90
>gi|112380630 leiomodin 1 (smooth muscle) [Homo sapiens]
Length = 600
Score = 37.4 bits (85), Expect = 0.008
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 14/96 (14%)
Query: 79 LSTFHIHKRRMKKRKMQRAQEEYERDHCSGSRGGG-GLPRPGRQAPTHAKETRLERQPRD 137
++ ++ R M K++ +R QE+ + G + +P+ G A K + P+
Sbjct: 461 MTVTNLLSRNMDKQRQKRLQEQRQAQEAKGEKKDLLEVPKAGAVAKGSPKPS-----PQP 515
Query: 138 SPFCAPSNASSLSSSSPGLPCQGPCAPPPPPPASSP 173
SP +P N+ + P APPPPPP +P
Sbjct: 516 SPKPSPKNSPKKGGA--------PAAPPPPPPPLAP 543
>gi|41152235 ubiquitin specific protease 51 [Homo sapiens]
Length = 711
Score = 36.6 bits (83), Expect = 0.014
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Query: 89 MKKRKMQRAQEEYERDHCSGSRGGGGLPRPGRQAPTHAKETRL--ERQPRDSPFCAPSNA 146
MK +Q + E + S GG P H+ + + R+PR P +
Sbjct: 56 MKLEPLQEREPAPEENLTWSSSGGDEKVLPSIPLRCHSSSSPVCPRRKPRPRPQPRARSR 115
Query: 147 SSLSSSSPGLPCQGPCAPPPPPPASSPQ 174
S S+P P P PPPPPP +P+
Sbjct: 116 SQPGLSAPPPPPARPPPPPPPPPPPAPR 143
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 35.8 bits (81), Expect = 0.024
Identities = 23/61 (37%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Query: 116 PRPGRQAPTHAKETRL---ERQPRDSPFCAPSNASSLSSSSPGLPCQGPCAPPPPPPASS 172
P+ PT A+ L + P P APS+ASS S SP P PPPPP +
Sbjct: 162 PQSNSSRPTCARHLTLGTGDGGPAPPP--APSSASSSPSPSPSSSSPSPPPPPPPPAPPA 219
Query: 173 P 173
P
Sbjct: 220 P 220
Score = 28.1 bits (61), Expect = 5.0
Identities = 26/88 (29%), Positives = 32/88 (36%), Gaps = 21/88 (23%)
Query: 87 RRMKKRKMQRAQEEYERDHCS-----GSRGGGGLPRPGRQAPTHAKETRLERQPRDSPFC 141
R + K Q R C+ G+ GG P P AP+ A +
Sbjct: 152 RAWRTGKTVSPQSNSSRPTCARHLTLGTGDGGPAPPP---APSSASSS------------ 196
Query: 142 APSNASSLSSSSPGLPCQGPCAPPPPPP 169
PS + S SS SP P P P PP P
Sbjct: 197 -PSPSPSSSSPSPPPPPPPPAPPAPPAP 223
Score = 27.3 bits (59), Expect = 8.6
Identities = 25/88 (28%), Positives = 36/88 (40%), Gaps = 8/88 (9%)
Query: 111 GGGGLPRP----GRQAPTHAKETRLERQPRD--SPFCAPSNASSLSSSSPGLPCQGPCAP 164
GG LP P G + + E +PR S F A+ + ++ P P
Sbjct: 375 GGAALPPPLLPPGDSEIEEGEIVQPEEEPRLALSLFRPGGRAARPTPAASATPTAQPLPQ 434
Query: 165 PPPPPASSPQGAHAASSCLDTAGEGLLQ 192
PP P +P+G S ++ GEG LQ
Sbjct: 435 PPAP--RAPEGDDFLSLHAESDGEGALQ 460
Score = 27.3 bits (59), Expect = 8.6
Identities = 26/100 (26%), Positives = 37/100 (37%), Gaps = 24/100 (24%)
Query: 86 KRRMKKRKMQRAQEEYERDHCSGSR----GGGGLPRPGRQAPTHAKETRLERQPRDSPFC 141
K K R+ A GSR GG R + + ++ R P++S
Sbjct: 745 KSSQKDRRRSGAASSSSSSREKGSRRKALDGGDRDRDRDRDRDRDRSSKKARPPKES--- 801
Query: 142 APSNASSLSSSSPGLPCQGPCAPPPPPPASSPQGAHAASS 181
APS+ PPP PP SS G+ ++SS
Sbjct: 802 APSSG-----------------PPPKPPVSSGSGSSSSSS 824
Score = 27.3 bits (59), Expect = 8.6
Identities = 24/79 (30%), Positives = 28/79 (35%), Gaps = 13/79 (16%)
Query: 110 RGGGGLPRPGRQAPTHAKETRLERQPRDS--PFCAPSNASSLSSSSPGLPCQGPCAPPP- 166
R GGG G Q L++ DS A S S + P PPP
Sbjct: 928 RSGGGSGGSGGQVS-------LKKSKADSCSQAAGTKGAEETSWSGEERAAKVPSTPPPK 980
Query: 167 ---PPPASSPQGAHAASSC 182
PPPA +P SSC
Sbjct: 981 AAPPPPALTPDSQTVDSSC 999
>gi|109689723 abl interactor 2 [Homo sapiens]
Length = 475
Score = 35.8 bits (81), Expect = 0.024
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 17/77 (22%)
Query: 112 GGGLPRPGRQAPTHAKETRLERQPRDSPFCAPSNAS------SLSSSSPGLPCQGPCA-- 163
GG LP R+ P+ +T L+ Q PF + + S S+ +P LP G A
Sbjct: 299 GGSLPY--RRPPSITSQTSLQNQMNGGPFYSQNPVSLAPPPPSILQVTPQLPLMGFVARV 356
Query: 164 -------PPPPPPASSP 173
PPPPPP P
Sbjct: 357 QENISDTPPPPPPVEEP 373
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 35.8 bits (81), Expect = 0.024
Identities = 26/91 (28%), Positives = 35/91 (38%), Gaps = 10/91 (10%)
Query: 105 HCSGSRGGGGLPRPGRQAPTHAKETRLERQPRDSPFCAPSNASSLSSSSPGLPCQGPCAP 164
+C G G G PG + +P + P + L S P P P
Sbjct: 993 YCPGRASGAGPETPGLGLDPN--------KPPELPSTVNAEPLGLIQSGPHQAAPPPPPP 1044
Query: 165 PPPPP--ASSPQGAHAASSCLDTAGEGLLQT 193
PPPPP AS P+G + T + LL+T
Sbjct: 1045 PPPPPAPASEPKGGLTSPIFCSTKPKKLLKT 1075
Score = 32.3 bits (72), Expect = 0.27
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Query: 116 PRPGRQAPTHAKETRLERQPRDSPFCAPSNASSLSSSSPGLPCQG-PCAPPPPPPASSPQ 174
P+P P + L P P AP+ +S P P P PPPPPPA++P
Sbjct: 1467 PQPQPPPPPPPPQPALPSPP---PLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPL 1523
Query: 175 GA 176
A
Sbjct: 1524 AA 1525
Score = 30.0 bits (66), Expect = 1.3
Identities = 24/77 (31%), Positives = 29/77 (37%), Gaps = 1/77 (1%)
Query: 111 GGGGLPRPGRQAPTHAKETRLERQPRDSPFCAPSNASSLSSSSPGLPCQGPCAPPPPPPA 170
GG LP P + L P SP + L ++ Q P PPPPPP
Sbjct: 786 GGPDLPLVLPPPPPQLLPSVLSHAPSPSPSASKVGVHLLEPATRDGAPQPPPPPPPPPPP 845
Query: 171 SSPQ-GAHAASSCLDTA 186
Q AH S L+ A
Sbjct: 846 MPLQLEAHLRSHGLEPA 862
Score = 27.7 bits (60), Expect = 6.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 143 PSNASSLSSSSPGLPCQGPCAPPPPPPASSPQ 174
P S+ S+ +P P PP PPPA +PQ
Sbjct: 1437 PGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQ 1468
>gi|55741655 anoctamin 8 [Homo sapiens]
Length = 1232
Score = 35.4 bits (80), Expect = 0.032
Identities = 32/115 (27%), Positives = 45/115 (39%), Gaps = 24/115 (20%)
Query: 86 KRRMKKRKMQRAQEEYERDHCSGSRG-----GGGLP--RPGRQAPTHAKETRL-----ER 133
+RR ++ + + A+ R+H SG R G GL +A AK + ER
Sbjct: 903 RRREEEERQRHAEHHARREHDSGGREEARAEGSGLDPATSSEKASAKAKGSTAGGHGPER 962
Query: 134 QPRDSPFCAPSNASSL------------SSSSPGLPCQGPCAPPPPPPASSPQGA 176
R AP+N L S ++ L G A PPPA SP G+
Sbjct: 963 PKRPGSLLAPNNVMKLKQIIPLQGKFLSSGATSSLAAAGAGATTRPPPAQSPTGS 1017
>gi|239752764 PREDICTED: hypothetical protein [Homo sapiens]
Length = 370
Score = 35.4 bits (80), Expect = 0.032
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 120 RQAPTHAKETRLERQPRDSPFCAPSNASSLSSSSPGLPCQGP--CAPPPPPPASSPQGAH 177
R T + L+ P SP A S L + + LP P C PPP PPA+ AH
Sbjct: 183 RAGCTRLRPLLLQPPPMLSPGLAQSPGVELHARTLSLPAPSPAPCLPPPAPPAARTPSAH 242
Query: 178 A 178
+
Sbjct: 243 S 243
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 35.4 bits (80), Expect = 0.032
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 143 PSNASSLSSSSPGLPCQGPCAPPPPPPASSP 173
P SLSSS+P LP G P PPPP+ P
Sbjct: 335 PQRNLSLSSSTPPLPSPGRSGPLPPPPSERP 365
Score = 30.8 bits (68), Expect = 0.78
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 147 SSLSSSSPGLPCQGPCA--PPPPPPASSPQGAHAASSCLD 184
S S P LP P A PPPPPP++S + S C D
Sbjct: 409 SPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQDSPCED 448
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 35.4 bits (80), Expect = 0.032
Identities = 16/31 (51%), Positives = 18/31 (58%)
Query: 143 PSNASSLSSSSPGLPCQGPCAPPPPPPASSP 173
P SLSSS+P LP G P PPPP+ P
Sbjct: 335 PQRNLSLSSSTPPLPSPGRSGPLPPPPSERP 365
Score = 30.8 bits (68), Expect = 0.78
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 147 SSLSSSSPGLPCQGPCA--PPPPPPASSPQGAHAASSCLD 184
S S P LP P A PPPPPP++S + S C D
Sbjct: 409 SPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQDSPCED 448
>gi|186700625 Rab-like GTP-binding protein 1 isoform 2 [Homo
sapiens]
Length = 520
Score = 35.0 bits (79), Expect = 0.041
Identities = 27/89 (30%), Positives = 30/89 (33%), Gaps = 22/89 (24%)
Query: 99 EEYERDHCSGSRGGGGLPRPGRQAPTHAKETRLERQPRDSPFCAPSNASSLSSSSPGLPC 158
E R H S G P PG Q+P P+ A S SSSPG P
Sbjct: 276 EARSRGHASPLAANGQSPSPGSQSPV-----------------VPAGAVSTGSSSPGTPQ 318
Query: 159 QGP-----CAPPPPPPASSPQGAHAASSC 182
P APP P P A +C
Sbjct: 319 PAPQLPLNAAPPSSVPPVPPSEALPPPAC 347
>gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo
sapiens]
Length = 729
Score = 35.0 bits (79), Expect = 0.041
Identities = 27/89 (30%), Positives = 30/89 (33%), Gaps = 22/89 (24%)
Query: 99 EEYERDHCSGSRGGGGLPRPGRQAPTHAKETRLERQPRDSPFCAPSNASSLSSSSPGLPC 158
E R H S G P PG Q+P P+ A S SSSPG P
Sbjct: 276 EARSRGHASPLAANGQSPSPGSQSPV-----------------VPAGAVSTGSSSPGTPQ 318
Query: 159 QGP-----CAPPPPPPASSPQGAHAASSC 182
P APP P P A +C
Sbjct: 319 PAPQLPLNAAPPSSVPPVPPSEALPPPAC 347
Score = 28.5 bits (62), Expect = 3.9
Identities = 22/78 (28%), Positives = 29/78 (37%), Gaps = 7/78 (8%)
Query: 114 GLPRPGRQAPTHAKETRL-------ERQPRDSPFCAPSNASSLSSSSPGLPCQGPCAPPP 166
G P+P Q P +A E P + AP+ S+ S G APPP
Sbjct: 315 GTPQPAPQLPLNAAPPSSVPPVPPSEALPPPACPSAPAPRRSIISRLFGTSPATEAAPPP 374
Query: 167 PPPASSPQGAHAASSCLD 184
P P + +G S D
Sbjct: 375 PEPVPAAEGPATVQSVED 392
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 35.0 bits (79), Expect = 0.041
Identities = 31/97 (31%), Positives = 36/97 (37%), Gaps = 22/97 (22%)
Query: 107 SGSRGGGGLPRPGRQAPTHAKETRLERQPRDSPFCAPSNASSLSSSSPGL--PCQGP--- 161
SGS G P P RQ P L + P P S A S +P L P + P
Sbjct: 1292 SGSAGPSPAPSPARQPP-----AALAKPPGTPPSLGASPAKPPSPGAPALHVPAKPPRAA 1346
Query: 162 -------CAPPPPPPASSP-----QGAHAASSCLDTA 186
APP PP +SP Q S+CL A
Sbjct: 1347 AAAAAAAAAPPAPPEGASPGDSARQKLEETSACLAAA 1383
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 35.0 bits (79), Expect = 0.041
Identities = 30/113 (26%), Positives = 42/113 (37%), Gaps = 29/113 (25%)
Query: 86 KRRMKKRKMQRAQEEYERDHCSGSR--------------GGGGLPRPGRQAPTHAKETRL 131
+ R ++ +++R Q E+ER+ S G PG QA + ET
Sbjct: 243 QERERQEQLEREQLEWERERRISSAAAPASVETPLNSVLGDSSASEPGLQAASQPAETPS 302
Query: 132 ERQPRDSPFC---------APSNASSLSSSSPG------LPCQGPCAPPPPPP 169
++ P P+ AS PG LP GP PPPPPP
Sbjct: 303 QQGIVLGPLAPPPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPPPPP 355
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 35.0 bits (79), Expect = 0.041
Identities = 30/113 (26%), Positives = 42/113 (37%), Gaps = 29/113 (25%)
Query: 86 KRRMKKRKMQRAQEEYERDHCSGSR--------------GGGGLPRPGRQAPTHAKETRL 131
+ R ++ +++R Q E+ER+ S G PG QA + ET
Sbjct: 243 QERERQEQLEREQLEWERERRISSAAAPASVETPLNSVLGDSSASEPGLQAASQPAETPS 302
Query: 132 ERQPRDSPFC---------APSNASSLSSSSPG------LPCQGPCAPPPPPP 169
++ P P+ AS PG LP GP PPPPPP
Sbjct: 303 QQGIVLGPLAPPPPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPPPPP 355
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,222,924
Number of Sequences: 37866
Number of extensions: 618882
Number of successful extensions: 13510
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 676
Number of HSP's that attempted gapping in prelim test: 8942
Number of HSP's gapped (non-prelim): 4090
length of query: 197
length of database: 18,247,518
effective HSP length: 97
effective length of query: 100
effective length of database: 14,574,516
effective search space: 1457451600
effective search space used: 1457451600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.