Guide to the Human Genome
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Name: BTNL8 Sequence: fasta or formatted (316aa) NCBI GI: 229577048
Description:

butyrophilin-like 8 isoform 6

Referenced in:

Butyrophilin Family

Other entries for this name:
alt prot [347aa] butyrophilin-like 8 isoform 1 precursor
alt prot [384aa] butyrophilin-like 8 isoform 3 precursor
alt prot [340aa] butyrophilin-like 8 isoform 4 precursor
alt prot [375aa] butyrophilin-like 8 isoform 5
alt prot [500aa] butyrophilin-like 8 isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         15           1
 C cysteine            2.5          8           2
 D aspartate           4.1         13           2
 E glutamate           7.6         24           1
 F phenylalanine       5.7         18           2
 G glycine             6.0         19           2
 H histidine           4.1         13           1
 I isoleucine          5.4         17           1
 K lysine              5.1         16           1
 L leucine             7.6         24           2
 M methionine          0.9          3           1
 N asparagine          2.8          9           1
 P proline             5.4         17           2
 Q glutamine           4.1         13           1
 R arginine            7.0         22           2
 S serine              8.2         26           3
 T threonine           6.3         20           2
 V valine              7.3         23           2
 W tryptophan          2.2          7           1
 Y tyrosine            2.8          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   butyrophilin-like 8 isoform 6 
BTNL8                 1.000   butyrophilin-like 8 isoform 5 
BTNL8                 1.000   butyrophilin-like 8 isoform 3 precursor 
BTNL8                 1.000   butyrophilin-like 8 isoform 2 precursor 
BTNL3                 0.631   butyrophilin-like 3 
BTNL9                 0.238   butyrophilin-like 9 
BTNL8                 0.219   butyrophilin-like 8 isoform 4 precursor 
BTNL8                 0.219   butyrophilin-like 8 isoform 1 precursor 
BTN1A1                0.196   butyrophilin, subfamily 1, member A1 
ERMAP                 0.191   erythroblast membrane-associated protein precursor [...
ERMAP                 0.191   erythroblast membrane-associated protein precursor [...
BTN3A3                0.180   butyrophilin, subfamily 3, member A3 isoform a 
BTN3A3                0.180   butyrophilin, subfamily 3, member A3 isoform b [Homo...
TRIM27                0.177   ret finger protein 
TRIM39                0.174   tripartite motif-containing 39 isoform 2 
TRIM39                0.174   tripartite motif-containing 39 isoform 1 
TRIM58                0.172   tripartite motif-containing 58 
BTN3A1                0.169   butyrophilin, subfamily 3, member A1 isoform c [Hom...
BTN3A1                0.169   butyrophilin, subfamily 3, member A1 isoform a [Homo...
TRIM21                0.169   tripartite motif protein 21 
BTN2A2                0.164   butyrophilin, subfamily 2, member A2 isoform b [Homo...
BTN2A2                0.164   butyrophilin, subfamily 2, member A2 isoform a 
MEFV                  0.159   Mediterranean fever protein 
TRIM68                0.158   ring finger protein 137 
BTN2A1                0.158   butyrophilin, subfamily 2, member A1 isoform 1 precur...
TRIM60                0.145   ring finger protein 129 
TRIM11                0.144   tripartite motif-containing 11 
TRIML1                0.142   tripartite motif family-like 1 
TRIM75                0.137   tripartite motif-containing 75 
TRIM38                0.126   tripartite motif-containing 38 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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