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Search of human proteins with 45593130
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|45593130 guanine nucleotide binding protein-like 3 isoform 1
[Homo sapiens]
(549 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|45593130 guanine nucleotide binding protein-like 3 isoform 1 ... 1088 0.0
gi|45643129 guanine nucleotide binding protein-like 3 isoform 2 ... 1066 0.0
gi|45643127 guanine nucleotide binding protein-like 3 isoform 2 ... 1066 0.0
gi|9506611 guanine nucleotide binding protein-like 3 (nucleolar)... 282 6e-76
gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)... 171 1e-42
gi|93277113 GTP_binding protein [Homo sapiens] 61 2e-09
gi|223029424 large subunit GTPase 1 [Homo sapiens] 59 2e-08
gi|38788319 guanine nucleotide binding protein-like 1 [Homo sapi... 51 3e-06
gi|154354979 myosin X [Homo sapiens] 48 3e-05
gi|88759339 aster-associated protein [Homo sapiens] 47 6e-05
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 46 8e-05
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 45 2e-04
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 44 5e-04
gi|29244924 chromodomain helicase DNA binding protein 6 [Homo sa... 44 5e-04
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 44 5e-04
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 42 0.001
gi|30581135 structural maintenance of chromosomes 1A [Homo sapiens] 42 0.001
gi|148746195 trichohyalin [Homo sapiens] 42 0.001
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 42 0.002
gi|4503179 oral-facial-digital syndrome 1 [Homo sapiens] 41 0.002
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 41 0.003
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens] 41 0.003
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 41 0.003
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 41 0.003
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 41 0.003
gi|24308223 hypothetical protein LOC57577 [Homo sapiens] 41 0.003
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens] 40 0.006
gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens] 40 0.007
gi|148806928 hypothetical protein LOC57482 [Homo sapiens] 40 0.007
>gi|45593130 guanine nucleotide binding protein-like 3 isoform 1
[Homo sapiens]
Length = 549
Score = 1088 bits (2815), Expect = 0.0
Identities = 549/549 (100%), Positives = 549/549 (100%)
Query: 1 MKRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEAL 60
MKRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEAL
Sbjct: 1 MKRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEAL 60
Query: 61 LREAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAK 120
LREAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAK
Sbjct: 61 LREAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAK 120
Query: 121 SGKQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKS 180
SGKQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKS
Sbjct: 121 SGKQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKS 180
Query: 181 DLVPKENLESWLNYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGL 240
DLVPKENLESWLNYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGL
Sbjct: 181 DLVPKENLESWLNYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGL 240
Query: 241 WKLLGGFQETCSKAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQ 300
WKLLGGFQETCSKAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQ
Sbjct: 241 WKLLGGFQETCSKAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQ 300
Query: 301 ITIIDSPSFIVSPLNSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRN 360
ITIIDSPSFIVSPLNSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRN
Sbjct: 301 ITIIDSPSFIVSPLNSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRN 360
Query: 361 SLEFFTVLAQRRGMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIV 420
SLEFFTVLAQRRGMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIV
Sbjct: 361 SLEFFTVLAQRRGMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIV 420
Query: 421 VDMKSGFNLEELEKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERK 480
VDMKSGFNLEELEKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERK
Sbjct: 421 VDMKSGFNLEELEKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERK 480
Query: 481 QEEREDDKDSDQETVDEEVDENSSGMFAAEETGEALSEETTAGEQSTRSFILDKIIEEDD 540
QEEREDDKDSDQETVDEEVDENSSGMFAAEETGEALSEETTAGEQSTRSFILDKIIEEDD
Sbjct: 481 QEEREDDKDSDQETVDEEVDENSSGMFAAEETGEALSEETTAGEQSTRSFILDKIIEEDD 540
Query: 541 AYDFSTDYV 549
AYDFSTDYV
Sbjct: 541 AYDFSTDYV 549
>gi|45643129 guanine nucleotide binding protein-like 3 isoform 2
[Homo sapiens]
Length = 537
Score = 1066 bits (2756), Expect = 0.0
Identities = 537/537 (100%), Positives = 537/537 (100%)
Query: 13 MTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLE 72
MTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLE
Sbjct: 1 MTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLE 60
Query: 73 ELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQ 132
ELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQ
Sbjct: 61 ELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQ 120
Query: 133 ELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESWL 192
ELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESWL
Sbjct: 121 ELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESWL 180
Query: 193 NYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETCS 252
NYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETCS
Sbjct: 181 NYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETCS 240
Query: 253 KAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVS 312
KAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVS
Sbjct: 241 KAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVS 300
Query: 313 PLNSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRNSLEFFTVLAQRR 372
PLNSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRNSLEFFTVLAQRR
Sbjct: 301 PLNSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRNSLEFFTVLAQRR 360
Query: 373 GMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIVVDMKSGFNLEEL 432
GMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIVVDMKSGFNLEEL
Sbjct: 361 GMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIVVDMKSGFNLEEL 420
Query: 433 EKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERKQEEREDDKDSDQ 492
EKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERKQEEREDDKDSDQ
Sbjct: 421 EKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERKQEEREDDKDSDQ 480
Query: 493 ETVDEEVDENSSGMFAAEETGEALSEETTAGEQSTRSFILDKIIEEDDAYDFSTDYV 549
ETVDEEVDENSSGMFAAEETGEALSEETTAGEQSTRSFILDKIIEEDDAYDFSTDYV
Sbjct: 481 ETVDEEVDENSSGMFAAEETGEALSEETTAGEQSTRSFILDKIIEEDDAYDFSTDYV 537
>gi|45643127 guanine nucleotide binding protein-like 3 isoform 2
[Homo sapiens]
Length = 537
Score = 1066 bits (2756), Expect = 0.0
Identities = 537/537 (100%), Positives = 537/537 (100%)
Query: 13 MTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLE 72
MTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLE
Sbjct: 1 MTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLE 60
Query: 73 ELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQ 132
ELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQ
Sbjct: 61 ELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQ 120
Query: 133 ELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESWL 192
ELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESWL
Sbjct: 121 ELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESWL 180
Query: 193 NYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETCS 252
NYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETCS
Sbjct: 181 NYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETCS 240
Query: 253 KAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVS 312
KAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVS
Sbjct: 241 KAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVS 300
Query: 313 PLNSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRNSLEFFTVLAQRR 372
PLNSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRNSLEFFTVLAQRR
Sbjct: 301 PLNSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRNSLEFFTVLAQRR 360
Query: 373 GMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIVVDMKSGFNLEEL 432
GMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIVVDMKSGFNLEEL
Sbjct: 361 GMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIVVDMKSGFNLEEL 420
Query: 433 EKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERKQEEREDDKDSDQ 492
EKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERKQEEREDDKDSDQ
Sbjct: 421 EKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERKQEEREDDKDSDQ 480
Query: 493 ETVDEEVDENSSGMFAAEETGEALSEETTAGEQSTRSFILDKIIEEDDAYDFSTDYV 549
ETVDEEVDENSSGMFAAEETGEALSEETTAGEQSTRSFILDKIIEEDDAYDFSTDYV
Sbjct: 481 ETVDEEVDENSSGMFAAEETGEALSEETTAGEQSTRSFILDKIIEEDDAYDFSTDYV 537
>gi|9506611 guanine nucleotide binding protein-like 3
(nucleolar)-like [Homo sapiens]
Length = 582
Score = 282 bits (721), Expect = 6e-76
Identities = 162/425 (38%), Positives = 256/425 (60%), Gaps = 11/425 (2%)
Query: 29 HRKLR----KEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLDRQK 84
H+K+ + AK+ G K K P P+ + REAEL+K+ +EE++++Q+ R++
Sbjct: 18 HKKISWPYPQPAKQNGKKATSKVPSAPHFVHPNDHANREAELKKKWVEEMREKQQAAREQ 77
Query: 85 ELEKKRKLETN-PDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELKKVIEASDV 143
E +K+R +E+ D+ E KE L + + + ++K Y +E +KV+E SDV
Sbjct: 78 ERQKRRTIESYCQDVLRRQEEFEHKEEVLQELNMFPQLDDEATRKAYYKEFRKVVEYSDV 137
Query: 144 VLEVLDARDPLGCRCPQVEEAIVQS-GQKKLVLILNKSDLVPKENLESWLNYLKKELPTV 202
+LEVLDARDPLGCRC Q+EEA++++ G KKLVL+LNK DLVPKE +E WL+YL+ ELPTV
Sbjct: 138 ILEVLDARDPLGCRCFQMEEAVLRAQGNKKLVLVLNKIDLVPKEVVEKWLDYLRNELPTV 197
Query: 203 VFRASTKPKDKGKITKRVKAKK-NAAPFRSEVCFGKEGLWKLLGGFQET--CSKAIRVGV 259
F+AST+ + K V + + + +S+ CFG E L ++LG + IRVGV
Sbjct: 198 AFKASTQHQVKNLNRCSVPVDQASESLLKSKACFGAENLMRVLGNYCRLGEVRTHIRVGV 257
Query: 260 IGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVSPLNSSSA 319
+G PNVGKSS+INSLK+ + C+VG G+T+ MQ V LDK I ++D+P + P NS
Sbjct: 258 VGLPNVGKSSLINSLKRSRACSVGAVPGITKFMQEVYLDKFIRLLDAPGIVPGP-NSEVG 316
Query: 320 LALRSPASIE-VVKPMEAASAILSQADARQVVLKYTVPGYRNSLEFFTVLAQRRGMHQKG 378
LR+ ++ + P+ IL + + ++ Y V G++ + F T +A R G +KG
Sbjct: 317 TILRNCVHVQKLADPVTPVETILQRCNLEEISNYYGVSGFQTTEHFLTAVAHRLGKKKKG 376
Query: 379 GIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIVVDMKSGFNLEELEKNNAQ 438
G+ + E AAK + ++W +++Y PP + T P + + IV +M F++E+ E+ N
Sbjct: 377 GLYSQEQAAKAVLADWVSGKISFYIPPPATHTLPTHLSAEIVKEMTEVFDIEDTEQANED 436
Query: 439 SIRAI 443
++ +
Sbjct: 437 TMECL 441
>gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)
[Homo sapiens]
Length = 731
Score = 171 bits (434), Expect = 1e-42
Identities = 122/421 (28%), Positives = 204/421 (48%), Gaps = 54/421 (12%)
Query: 114 KTENKAKSGKQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQ-KK 172
+ E + + K+ K EL KVI++SDVV++VLDARDP+G R P +E + + K
Sbjct: 190 RNEAQEEIYKKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRSPHIETYLKKEKPWKH 249
Query: 173 LVLILNKSDLVPKENLESWLNYLKKELPTVVFRAS-TKPKDKGKITKRVKAKKNAAPFRS 231
L+ +LNK DLVP + W+ L ++ PT+ F AS T P KG + ++
Sbjct: 250 LIFVLNKCDLVPTWATKRWVAVLSQDYPTLAFHASLTNPFGKGAFIQLLRQ--------- 300
Query: 232 EVCFGKEGLWKLLGGFQETCSKAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRS 291
FGK T K I VG IG+PNVGKSS+IN+L+ +++CNV G T+
Sbjct: 301 ---FGK----------LHTDKKQISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKV 347
Query: 292 MQVVPLDKQITIIDSPSFIVSPLNSSSALALRSPASIEVVK-PMEAASAILSQADARQVV 350
Q + L ++I +ID P + +S + + L+ +E +K P + A+L +A +
Sbjct: 348 WQYITLMRRIFLIDCPGVVYPSEDSETDIVLKGVVQVEKIKSPEDHIGAVLERAKPEYIS 407
Query: 351 LKYTVPGYRNSLEFFTVLAQRRGMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTS-- 408
Y + + N+ +F LA R G KGG P+++ K++ ++W + ++ PP +
Sbjct: 408 KTYKIDSWENAEDFLEKLAFRTGKLLKGGEPDLQTVGKMVLNDWQRGRIPFFVKPPNAEP 467
Query: 409 -WTPPPYFNESIVVDMKSGFN------------------LEELEKNN--------AQSIR 441
P + S+ V ++ N EE E+N+ Q +
Sbjct: 468 LVAPQLLPSSSLEVVPEAAQNNPGEEVTETAGEGSESIIKEETEENSHCDANTEMQQILT 527
Query: 442 AIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERKQEEREDDKDSDQETVDEEVDE 501
++ +++ Q SG +E D+ EEL + ++EE+E +D +E+ E +E
Sbjct: 528 RVRQNFGKINVVPQFSGDDLVPVEVSDLEEELESFSDEEEEEQEQQRDDAEESSSEPEEE 587
Query: 502 N 502
N
Sbjct: 588 N 588
>gi|93277113 GTP_binding protein [Homo sapiens]
Length = 334
Score = 61.2 bits (147), Expect = 2e-09
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 29/194 (14%)
Query: 132 QELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESW 191
++++ ++ D ++EV DAR PL R P +E + G K +L+LNK DL +
Sbjct: 40 KKMQSSLKLVDCIIEVHDARIPLSGRNPLFQETL---GLKPHLLVLNKMDLADLTEQQKI 96
Query: 192 LNYLKKE-LPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQET 250
+ +L+ E L V+F K ++ +I V RS KE L E
Sbjct: 97 MQHLEGEGLKNVIFTNCVKDENVKQIIPMVTELIG----RSHRYHRKENL--------EY 144
Query: 251 CSKAIRVGVIGFPNVGKSSIINSLKQEQM-----CNVGVSMGLTRS-MQVVPLDKQ--IT 302
C + VIG PNVGKSS+INSL+++ + VG G+TR+ M + + ++ +
Sbjct: 145 C-----IMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVMSKIQVSERPLMF 199
Query: 303 IIDSPSFIVSPLNS 316
++D+P + + S
Sbjct: 200 LLDTPGVLAPRIES 213
>gi|223029424 large subunit GTPase 1 [Homo sapiens]
Length = 658
Score = 58.5 bits (140), Expect = 2e-08
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 22/134 (16%)
Query: 72 EELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYC 131
EELKQ +K LE +R+L + + + P E+ +
Sbjct: 126 EELKQAEK---DNFLEWRRQLVRLEEEQKLILTPFERNLD------------------FW 164
Query: 132 QELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQ-SGQKKLVLILNKSDLVPKENLES 190
++L +VIE SD+V++++DAR+PL RC +E + + K+ V+++NK+DL+ E +
Sbjct: 165 RQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEMDANKENVILINKADLLTAEQRSA 224
Query: 191 WLNYLKKELPTVVF 204
W Y +KE V+F
Sbjct: 225 WAMYFEKEDVKVIF 238
Score = 55.1 bits (131), Expect = 2e-07
Identities = 47/225 (20%), Positives = 98/225 (43%), Gaps = 18/225 (8%)
Query: 255 IRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVSPL 314
+ VG++G+PNVGKSS IN++ + +V + G T+ Q + ++ + + D P ++
Sbjct: 387 LTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSF 446
Query: 315 NSSSA-LALRSPASIEVVKPMEAASAILSQADARQVV-----LKYTVPGYRN-------S 361
S+ A + I+ ++ +++ Q R V+ + P S
Sbjct: 447 VSTKAEMTCSGILPIDQMRDHVPPVSLVCQNIPRHVLEATYGINIITPREDEDPHRPPTS 506
Query: 362 LEFFTVLAQRRGMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIVV 421
E T RG G P+ +A+ + ++ L YCHPP P + ++ +
Sbjct: 507 EELLTAYGYMRGFMTAHGQPDQPRSARYILKDYVSGKL-LYCHPPPGRDPVTFQHQHQRL 565
Query: 422 DMKSGFNLEELEKNNAQSIRAIKGPHLANSILFQSS---GLTNGI 463
+++ N +E++ ++ +A + ++ + F LT G+
Sbjct: 566 -LENKMNSDEIKMQLGRNKKAKQIENIVDKTFFHQENVRALTKGV 609
>gi|38788319 guanine nucleotide binding protein-like 1 [Homo
sapiens]
Length = 607
Score = 50.8 bits (120), Expect = 3e-06
Identities = 69/281 (24%), Positives = 103/281 (36%), Gaps = 53/281 (18%)
Query: 255 IRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVSPL 314
+ +G +GFPNVGKSS+IN L ++ +V + G TR Q L + + D P I L
Sbjct: 361 VTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSL 420
Query: 315 NSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRN--------SLEFFT 366
L I ++ A L+ Q +L P + + +
Sbjct: 421 LPRQLQVLAGIYPIAQIQEPYTAVGYLASRIPVQALLHLRHPEAEDPSAEHPWCAWDICE 480
Query: 367 VLAQRRGMH-QKGGIPNVEGAAKLLWSEWTGASLAYYCHPP------TSWTPPPYFNESI 419
A++RG K +V AA L L+ HPP +W P E +
Sbjct: 481 AWAEKRGYKTAKAARNDVYRAANSLLRLAVDGRLSLCFHPPGYSEQKGTWESHPETTELV 540
Query: 420 VVDMKSGFNLEELEKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKER 479
V+ + G +G EE++ EEL E
Sbjct: 541 VLQGRVG-----------------------------PAG-----DEEEEEEEELSSSCE- 565
Query: 480 KQEEREDDKDSDQE-TVDEEVDENSSGMFAAEETGEALSEE 519
EE E+D+D+D+E DEE ++ G A AL E
Sbjct: 566 --EEGEEDRDADEEGEGDEETPTSAPGSSLAGRNPYALLGE 604
>gi|154354979 myosin X [Homo sapiens]
Length = 2058
Score = 47.8 bits (112), Expect = 3e-05
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 29/159 (18%)
Query: 7 KKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAEL 66
++ +++ KR + +KK +E K ++E ++R ++ R REAEL
Sbjct: 805 RRVYRQLLAEKREQEEKKKQEEEEKKKREEEERERERER----------------REAEL 848
Query: 67 RKQRLEELKQQQKLD----RQKELEKKRKLETNPDIKP-SNVEPMEKEFGLCKTENKAKS 121
R Q+ EE ++QQ+L+ QKE E R+LE + K + +EKE E+ +
Sbjct: 849 RAQQEEETRKQQELEALQKSQKEAELTRELEKQKENKQVEEILRLEKEI-----EDLQRM 903
Query: 122 GKQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQ 160
+Q L L+K+ E D L L+ CR Q
Sbjct: 904 KEQQELSLTEASLQKLQERRDQELRRLEEE---ACRAAQ 939
>gi|88759339 aster-associated protein [Homo sapiens]
Length = 647
Score = 46.6 bits (109), Expect = 6e-05
Identities = 39/137 (28%), Positives = 71/137 (51%), Gaps = 7/137 (5%)
Query: 7 KKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAEL 66
KKA+KR ++ K ++E K + AKKR +K +K N+A EAL +
Sbjct: 461 KKAAKREEALASFEAWKAMKEKEAK-KIAAKKRLEEKNKKKTEEENAARKGEALQAFEKW 519
Query: 67 RKQRLEELKQQQKLDRQKELEKKRK-LETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQN 125
+++++E LK++ + +R+ E KK+K ET + K N+ +EK E K KQ
Sbjct: 520 KEKKMEYLKEKNRKEREYERAKKQKEEETVAEKKKDNLTAVEK-----WNEKKEAFFKQK 574
Query: 126 SKKLYCQELKKVIEASD 142
K+ ++ K+ ++ ++
Sbjct: 575 EKEKINEKRKEELKRAE 591
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 46.2 bits (108), Expect = 8e-05
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 6/130 (4%)
Query: 2 KRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALL 61
KR + KK K+ +R K +++ R+ K RKE +++ +K +K+ K+
Sbjct: 55 KRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEK---KKRERKQRGR 111
Query: 62 REAELRKQRLE---ELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENK 118
RE + +K+R E E KQ+++ R+K +KKR+ E + + E K+ + E K
Sbjct: 112 RERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKK 171
Query: 119 AKSGKQNSKK 128
+ ++ KK
Sbjct: 172 RERNRKERKK 181
Score = 45.8 bits (107), Expect = 1e-04
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 2 KRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALL 61
KR K KK +R +R + +KK R+ + K+ ++R KK RK KE
Sbjct: 96 KRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGK 155
Query: 62 REAELRKQRLEEL---KQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKE 109
RE + +K++ EE +++ + +R+KE E+K + E + K + E++
Sbjct: 156 RERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERK 206
Score = 43.5 bits (101), Expect = 5e-04
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 2 KRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALL 61
+R K +K + KR K +KK RE ++ R+E KK KK RK+ N +
Sbjct: 81 EREKQRKERREKERRKRKK-EKKKRERKQRGRRERKK---KKERKERERENKQ--RRERK 134
Query: 62 REAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKS 121
R+ +K+R +E K++++ +++ KKRK E + N + +KE + + K
Sbjct: 135 RKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKE 194
Query: 122 GKQNSKK 128
K+ +K
Sbjct: 195 RKKERRK 201
Score = 43.1 bits (100), Expect = 7e-04
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 2 KRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALL 61
KR + K+ + KR + +K+ +E K R++ KK K+ RK G KE
Sbjct: 68 KRERGKERER-----KRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKE 122
Query: 62 REAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKS 121
RE E +++R + K+++K R+KE RK E + + +KE K E K
Sbjct: 123 RERENKQRRERKRKKRRKKKRRKE----RKREKERGKRERKRKKRKKEEREKKRERNRKE 178
Query: 122 GKQNSKKLYCQELKK 136
K+ ++ +E KK
Sbjct: 179 RKKERERKERRERKK 193
Score = 43.1 bits (100), Expect = 7e-04
Identities = 26/107 (24%), Positives = 52/107 (48%)
Query: 2 KRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALL 61
+R + ++ +K+ KR K +KK R RK KE KR K+ ++ +
Sbjct: 119 ERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKE 178
Query: 62 REAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEK 108
R+ E ++ E K+++K +R+K+ E+K+ +T+ P+ +
Sbjct: 179 RKKERERKERRERKKERKKERRKKKERKKDRKTDRQTDSQVFRPLRE 225
Score = 42.4 bits (98), Expect = 0.001
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Query: 7 KKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAEL 66
KK + KR + +++ RE +K +K+ KKR K R+ KE RE E
Sbjct: 37 KKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKER--REKER 94
Query: 67 RKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNS 126
RK++ E+ K+++K ++E +KK++ + E K+ K + K K+
Sbjct: 95 RKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERG 154
Query: 127 KK 128
K+
Sbjct: 155 KR 156
Score = 39.7 bits (91), Expect = 0.007
Identities = 31/128 (24%), Positives = 63/128 (49%), Gaps = 14/128 (10%)
Query: 1 MKRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEAL 60
+ +P ++ S+R + + +K+ RE RK R+ KK K+ +++ G KE
Sbjct: 25 ISKPCTQRESERKKERREREKRKREREKERK-RERGKKEKKKRKKRERG-------KERE 76
Query: 61 LREAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAK 120
+ E KQR +E +++++ R+KE +K+ + + + E E+E ENK +
Sbjct: 77 RKRKEREKQR-KERREKERRKRKKEKKKRERKQRGRRERKKKKERKERE-----RENKQR 130
Query: 121 SGKQNSKK 128
++ K+
Sbjct: 131 RERKRKKR 138
Score = 33.1 bits (74), Expect = 0.68
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 25/125 (20%)
Query: 5 KLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREA 64
KL + ++C K + +K R+E +KR + RE
Sbjct: 12 KLNTELQMVSCSHISKPCTQRESERKKERREREKRKRE-------------------REK 52
Query: 65 ELRKQR-LEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGK 123
E +++R +E K+++K +R KE E+KRK + + E EKE K E K + K
Sbjct: 53 ERKRERGKKEKKKRKKRERGKERERKRK-----EREKQRKERREKERRKRKKEKKKRERK 107
Query: 124 QNSKK 128
Q ++
Sbjct: 108 QRGRR 112
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 45.4 bits (106), Expect = 1e-04
Identities = 30/127 (23%), Positives = 59/127 (46%)
Query: 2 KRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALL 61
+R + K+ +R KR + +K+ + +K +E KKR +K K+ KE
Sbjct: 63 RREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKE 122
Query: 62 REAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKS 121
R ++ + E K+++K + +KE E+K++ + + K+ G + E K K
Sbjct: 123 RGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKE 182
Query: 122 GKQNSKK 128
K+ K+
Sbjct: 183 RKERKKR 189
Score = 43.1 bits (100), Expect = 7e-04
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Query: 2 KRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALL 61
+R K ++ + ++ K +KK ++ + KE K+R K+ RK KE
Sbjct: 96 ERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEERE 155
Query: 62 REAELRKQRLEELKQQ-QKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAK 120
+E E ++++ E KQ +K + +KE E+K + + + K E KE K E K K
Sbjct: 156 KERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKK 215
Query: 121 SGKQNSKK 128
++ ++
Sbjct: 216 EERKKERQ 223
Score = 42.0 bits (97), Expect = 0.001
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 2 KRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGH------KKPRKDPGVPNSAP 55
K+ + KK + +R K K+ E ++ +KE K+RG ++ RK+
Sbjct: 86 KKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERK 145
Query: 56 FKEALLREAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKT 115
+E E E ++R E K+++K +KE E+K K + N + +KE +
Sbjct: 146 ERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKER 205
Query: 116 ENKAKSGKQNSKK 128
+ K K+ ++
Sbjct: 206 RERKKERKKKEER 218
Score = 37.4 bits (85), Expect = 0.036
Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 7/122 (5%)
Query: 7 KKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAEL 66
K+ +R +R + ++K RE ++ R++ ++R +K R+ V KE +E E
Sbjct: 128 KEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGE----KEEERKEKE- 182
Query: 67 RKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNS 126
RK+R + +++ + +R+KE E+K + E + K E++ + + GK+
Sbjct: 183 RKERKK--RERNRKERKKERERKERRERKKERKKKEERKKERQKDRQTNWREKERGKRER 240
Query: 127 KK 128
K+
Sbjct: 241 KE 242
Score = 35.4 bits (80), Expect = 0.14
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 26/107 (24%)
Query: 22 QKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLD 81
Q ++RE R++ E +K G K+ RE+E +K+R E K
Sbjct: 35 QSEIREREREI--ETRKEGKKE------------------RESERKKERREREK------ 68
Query: 82 RQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKK 128
R++E EK+RK E K + E+E + E + K G++ K+
Sbjct: 69 RKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKR 115
Score = 31.6 bits (70), Expect = 2.0
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 15/110 (13%)
Query: 23 KKVREHHRKLRK---EAKKRGHKKPRK-DPGVPNSAPFKEALLREAELRKQRLEELKQQQ 78
KK RE RK + E +KR +K RK + G ++ RE + R+ R +E K+ +
Sbjct: 52 KKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRR-REKENKEGE 110
Query: 79 KLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKK 128
+ +++K+ EKK + T+ + K E+E K E K + K+ +K
Sbjct: 111 EKEKRKKKEKKERGRTSKEGK-------ERE---RKEERKREERKERERK 150
Score = 31.2 bits (69), Expect = 2.6
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 22/92 (23%)
Query: 2 KRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKR--GHKKPRKDPGVPNSAPFKEA 59
K + K+ KR +R ++ +K E K RKE KKR K+ +K+
Sbjct: 156 KERERKERKKR----ERKQVGEKEEERKEKERKERKKRERNRKERKKE------------ 199
Query: 60 LLREAELRKQRLEELKQQQKLDRQKELEKKRK 91
RE + R++R +E K+++ +R+KE +K R+
Sbjct: 200 --RERKERRERKKERKKKE--ERKKERQKDRQ 227
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 44.7 bits (104), Expect = 2e-04
Identities = 55/224 (24%), Positives = 90/224 (40%), Gaps = 49/224 (21%)
Query: 5 KLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVP-NSAPFKEALLRE 63
K + A K+ T K ++K + K++ E KK +KP+K+ + P K+
Sbjct: 617 KAEVAEKQATDVKPKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKE---- 672
Query: 64 AELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGK 123
K + EE+K++ K + +KE +K+ K E + P V+ K K E K +
Sbjct: 673 ---EKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEVKKEVK-----KEEKKEVKKE 724
Query: 124 QNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLV 183
+ K ++L K + S L L + P+ EE++ K D V
Sbjct: 725 EKEPKKEIKKLPKDAKKSSTPLSEAKKPAALKPKVPKKEESV-------------KKDSV 771
Query: 184 PKENLESWLNYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAA 227
A+ KPK+KGKI K +K + AA
Sbjct: 772 ----------------------AAGKPKEKGKI-KVIKKEGKAA 792
Score = 42.4 bits (98), Expect = 0.001
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 12/146 (8%)
Query: 2 KRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALL 61
++PK + A K + + + K E ++++KE KK K+P+K+ V P KE
Sbjct: 654 EKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPKKE--VKKETPPKEV-- 709
Query: 62 REAELRKQRLEELKQQQKLDRQ--KELEKKRKLETNP---DIKPSNVEPM--EKEFGLCK 114
+ E++K+ +E+K+++K ++ K+L K K + P KP+ ++P +KE + K
Sbjct: 710 -KKEVKKEEKKEVKKEEKEPKKEIKKLPKDAKKSSTPLSEAKKPAALKPKVPKKEESVKK 768
Query: 115 TENKAKSGKQNSKKLYCQELKKVIEA 140
A K+ K ++ K EA
Sbjct: 769 DSVAAGKPKEKGKIKVIKKEGKAAEA 794
Score = 32.0 bits (71), Expect = 1.5
Identities = 43/209 (20%), Positives = 90/209 (43%), Gaps = 28/209 (13%)
Query: 31 KLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLDRQKELEKKR 90
KL++ A R KP P +P+ + KE+ E+ K + +++ K++ ++++ K+
Sbjct: 534 KLKQRADSRESLKPAAKP-LPSKSVRKESKEETPEVTK--VNHVEKPPKVESKEKVMVKK 590
Query: 91 ----KLETNPDIK----PSNVEPMEKEFGLCK---TENKAKSGKQNS----KKLYCQELK 135
K ET P + PS EP + + + T+ K K+ K+ + K+ ++ K
Sbjct: 591 DKPIKTETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKETKVKPEDKK 650
Query: 136 KVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESWLNYL 195
+ E + + + P+ +E + + +K+ + KE + +
Sbjct: 651 EEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKE----------IKKEEKKEPKKEV 700
Query: 196 KKELPTVVFRASTKPKDKGKITKRVKAKK 224
KKE P + K ++K ++ K K K
Sbjct: 701 KKETPPKEVKKEVKKEEKKEVKKEEKEPK 729
Score = 31.6 bits (70), Expect = 2.0
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 21 IQKKVREHHRKLRKEAKKRGHKKPRKDPGV--PNSAPFKEALLREAELRKQRLEELKQQQ 78
++K ++E + + K + +K G P +A K A L+E+ + R+ K+++
Sbjct: 2235 LKKDLKEKTKTKKPGTKTKSSSPVKKSDGKSKPLAASPKPAGLKESSDKVSRVASPKKKE 2294
Query: 79 KLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKK 128
+ EK K T P++K + E +KE T+N A + S K
Sbjct: 2295 SV------EKAAKPTTTPEVKAARGEEKDKE-----TKNAANASASKSAK 2333
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 43.5 bits (101), Expect = 5e-04
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 15/201 (7%)
Query: 24 KVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLDRQ 83
KV+E +K +E K K AP KEA + E +K+ E ++ K++ +
Sbjct: 834 KVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAK 893
Query: 84 K-ELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELKKVIEASD 142
K E E K+K+ T P+ VE E K + K + K+ +E K E +
Sbjct: 894 KEEAEDKKKVPTPEKEAPAKVEVKED----AKPKEKTEVAKKEPDDAKAKEPSKPAEKKE 949
Query: 143 VVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESWLNYLKKELPTV 202
E D ++ + P+ E+ ++ K+ L+K PK K E +
Sbjct: 950 AAPEKKDTKEE-KAKKPE-EKPKTEAKAKEDDKTLSKEPSKPKAE--------KAEKSSS 999
Query: 203 VFRASTKPKDKGKITKRVKAK 223
+ +KP +K K K K
Sbjct: 1000 TDQKDSKPPEKATEDKAAKGK 1020
Score = 37.4 bits (85), Expect = 0.036
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 9/130 (6%)
Query: 7 KKASKRMTCHKRYKIQKKVREHH-------RKLRKEAKKRGHKKPRKDPGVPNSAPFKEA 59
KK SK+ K+ + KV E ++ + EAKK + +K P AP K
Sbjct: 856 KKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVE 915
Query: 60 LLREAELRKQRLEELKQQQKLDRQKELEKK-RKLETNPDIKPSNVEPMEKEFGLCKTENK 118
+ +A+ K++ E K++ + KE K K E P+ K + E +K KTE K
Sbjct: 916 VKEDAK-PKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAK 974
Query: 119 AKSGKQNSKK 128
AK + K
Sbjct: 975 AKEDDKTLSK 984
Score = 30.0 bits (66), Expect = 5.7
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 7/103 (6%)
Query: 23 KKVREHHRKLRKEAKKRGHKKP-RKDPGVPNSAPFKEALLREAELRKQRLEELKQQQK-L 80
K+ E +K +AK + KP K P KE ++ E + + + K+ K L
Sbjct: 923 KEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTL 982
Query: 81 DRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGK 123
++ K K E + + +P EK TE+KA GK
Sbjct: 983 SKEPSKPKAEKAEKSSSTDQKDSKPPEKA-----TEDKAAKGK 1020
>gi|29244924 chromodomain helicase DNA binding protein 6 [Homo
sapiens]
Length = 2715
Score = 43.5 bits (101), Expect = 5e-04
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 3 RPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLR 62
+PK K+ K ++ K KK +EH +K+ K+ +KPR+ G A K +
Sbjct: 117 KPKRKREPKEPKEPRKAKEPKKAKEHKEPKQKDGAKKA-RKPREASGT-KEAKEKRSCTD 174
Query: 63 EAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLC--------- 113
A K R + K+Q +K+ + KRK ET VE +E + GL
Sbjct: 175 SAARTKSR-KASKEQGPTPVEKKKKGKRKSET-------TVESLELDQGLTNPSLRSPEE 226
Query: 114 KTEN----KAKSGKQNSKKLYCQELK-KVIEASDVVLEVLDA 150
TE+ K +SG+Q ++ Y ++L KV++ + VL A
Sbjct: 227 STESTDSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGA 268
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 43.5 bits (101), Expect = 5e-04
Identities = 36/161 (22%), Positives = 81/161 (50%), Gaps = 17/161 (10%)
Query: 5 KLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREA 64
KLK+ +++ ++ +++RE R+ +E +K K+ ++ KE RE
Sbjct: 484 KLKRLDEKLGILEKQPSPEEIREREREKEREREKELEKEQEQERE-------KE---REK 533
Query: 65 ELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQ 124
+ +Q+ +E + +++ ++Q+E+EK+RK E +++ EKE L K + + K +
Sbjct: 534 DRERQQEKEKELEKEQEKQREMEKERKQEKEKELE----RQKEKEKELQKMKEQEKECEL 589
Query: 125 NSKKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQVEEAI 165
++ ++L++ IE + LE + + C + EE +
Sbjct: 590 EKER---EKLEEKIEPREPNLEPMVEKQESENSCNKEEEPV 627
Score = 38.5 bits (88), Expect = 0.016
Identities = 35/152 (23%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Query: 20 KIQKKVREHHRKLRKEAKKR-GHKKPRKDP--GVPNSAPFKEALLREAELRK--QRLEEL 74
+ +K+ E R++ ++ K K R D G+ P E + RE E K +R +EL
Sbjct: 461 RARKRREEEERRMEEQRKAACAEKLKRLDEKLGILEKQPSPEEI-REREREKEREREKEL 519
Query: 75 KQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKS-GKQNSKKLYCQE 133
+++Q+ +R+KE EK R+ + + + + ++E + + K K +Q K+ Q+
Sbjct: 520 EKEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEKERKQEKEKELERQKEKEKELQK 579
Query: 134 LKKVIEASDVVLEVLDARDPLGCRCPQVEEAI 165
+K+ + ++ E + + R P +E +
Sbjct: 580 MKEQEKECELEKEREKLEEKIEPREPNLEPMV 611
Score = 38.1 bits (87), Expect = 0.021
Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 24/133 (18%)
Query: 18 RYKIQKKVREHHRKLRKEAKKRGHKKPRKDPG--VPNSAPFKEALLREAELRKQRLEELK 75
R + ++K RE ++L KE ++ K+ KD ++ ++ E+ K+R +E
Sbjct: 505 REREREKEREREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEKERKQE-- 562
Query: 76 QQQKLDRQKELEK-----------------KRKLETNPDIKPSNVEPM---EKEFGLCKT 115
++++L+RQKE EK + KLE + + N+EPM ++ C
Sbjct: 563 KEKELERQKEKEKELQKMKEQEKECELEKEREKLEEKIEPREPNLEPMVEKQESENSCNK 622
Query: 116 ENKAKSGKQNSKK 128
E + +Q+S +
Sbjct: 623 EEEPVFTRQDSNR 635
Score = 37.0 bits (84), Expect = 0.047
Identities = 28/111 (25%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Query: 27 EHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEAL-LREAELRKQRLEELKQQQKLDRQKE 85
E RK R+E ++R ++ RK E L + E + + + E +++++ +R+KE
Sbjct: 460 ERARKRREEEERRMEEQ-RKAACAEKLKRLDEKLGILEKQPSPEEIREREREKEREREKE 518
Query: 86 LEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELKK 136
LEK+++ E + + EKE L K + K + ++ K+ +EL++
Sbjct: 519 LEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEKERKQEKEKELER 569
Score = 30.8 bits (68), Expect = 3.4
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 462 GIIEEKDIHEELPKRKERKQEEREDDKDSDQETVDEEVDE 501
GI+E++ EE+ +R+ K+ ERE + + +QE E+ E
Sbjct: 493 GILEKQPSPEEIREREREKEREREKELEKEQEQEREKERE 532
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 42.4 bits (98), Expect = 0.001
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 16/96 (16%)
Query: 3 RPKLKKASKRMTCHKRYKIQKKVREHHRKL-RKEAKKRGHKKPRKDPGVPNSAPFKEALL 61
R + +K +R T KR + ++ RE RK R+ ++R ++ RK
Sbjct: 272 RDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRK--------------- 316
Query: 62 REAELRKQRLEELKQQQKLDRQKELEKKRKLETNPD 97
RE E ++R E +++ + DR+KE E+KRK +T D
Sbjct: 317 RERERERERERERQRETERDREKERERKRKRQTEMD 352
Score = 32.7 bits (73), Expect = 0.88
Identities = 27/124 (21%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 7 KKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHK-KPRKDPGVPNSAPFKEALLREAE 65
+K +R T +R + ++K R ++ +E ++ G + + R+ G + R+AE
Sbjct: 102 EKERERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQR-----ERERQRDAE 156
Query: 66 LRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENK-AKSGKQ 124
++R + ++Q++ +R ++ K+R+ E N + EKE KTE++ ++ G++
Sbjct: 157 KERERQTDRERQRQTERNRQ--KEREREKNRQERRERERQREKE---NKTEDRHSERGRE 211
Query: 125 NSKK 128
++
Sbjct: 212 RERE 215
Score = 32.3 bits (72), Expect = 1.2
Identities = 22/94 (23%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 17 KRYKIQKKVREHHRKLRKEAKKRGHK-KPRKDPGVPNSAPFKEALLREAELRKQRLEELK 75
KR + + RE +R+ +E +++ + + R+ SA +E R+ + +Q+ E +
Sbjct: 344 KRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSAREREERERDRDRDRQKERERQ 403
Query: 76 QQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKE 109
++ D Q+E EK+R+ E + + + E+E
Sbjct: 404 TEKDRDGQRETEKQREREKDRESERGRERGRERE 437
Score = 30.0 bits (66), Expect = 5.7
Identities = 20/103 (19%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 7 KKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAEL 66
+K +R T +R + ++ R+ R+ K ++R ++ +++ E R E
Sbjct: 156 EKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKENKTEDRHSE---RGRER 212
Query: 67 RKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKE 109
++R E + ++K +E +++RK E + + E+E
Sbjct: 213 ERERETETETERKRQTDRERDRQRKTEREREKQAERERASERE 255
>gi|30581135 structural maintenance of chromosomes 1A [Homo sapiens]
Length = 1233
Score = 42.4 bits (98), Expect = 0.001
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 21 IQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKL 80
++K +E ++ +E++ +G ++ V KE + A Q LE+ + QK
Sbjct: 343 VEKARQEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKA 402
Query: 81 DRQK-ELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQN 125
D+ + +LE+++K+ET IK E E + + K E + KQ+
Sbjct: 403 DQDRLDLEERKKVETEAKIKQKLREIEENQKRIEKLEEYITTSKQS 448
Score = 29.3 bits (64), Expect = 9.8
Identities = 34/150 (22%), Positives = 68/150 (45%), Gaps = 34/150 (22%)
Query: 22 QKKVREHHRKLRKEAKKRG------------HKKPRKD-------PGVPNSAPFKEALLR 62
+ +V+++HR L++EA KR +K +D V A K+ L R
Sbjct: 369 ENQVKKYHR-LKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKL-R 426
Query: 63 EAELRKQRLEELKQ-----QQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTE- 116
E E ++R+E+L++ +Q L+ QK+LE +L ++ ++ + KE +
Sbjct: 427 EIEENQKRIEKLEEYITTSKQSLEEQKKLE--GELTEEVEMAKRRIDEINKELNQVMEQL 484
Query: 117 -----NKAKSGKQNSKKLYCQELKKVIEAS 141
++ +S +Q K + +K++ S
Sbjct: 485 GDARIDRQESSRQQRKAEIMESIKRLYPGS 514
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 42.0 bits (97), Expect = 0.001
Identities = 24/72 (33%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 22 QKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLD 81
+K+ R+ LRKE +K ++P++ + L R+ ELR++R EE +QQQ+L
Sbjct: 243 EKEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLERQ-ELRRERQEEEQQQQRLR 301
Query: 82 RQKELEKKRKLE 93
R+++L +K++ E
Sbjct: 302 REQQLRRKQEEE 313
Score = 37.0 bits (84), Expect = 0.047
Identities = 16/99 (16%), Positives = 54/99 (54%)
Query: 1 MKRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEAL 60
++R + ++ ++ + ++++K E R+ ++E +++ ++ +++ ++
Sbjct: 286 LRRERQEEEQQQQRLRREQQLRRKQEEERREQQEERREQQERREQQEERREQQLRREQEE 345
Query: 61 LREAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIK 99
RE +LR+++ EE ++QQ Q+E ++++L ++
Sbjct: 346 RREQQLRREQEEERREQQLRREQEEERREQQLRREQQLR 384
Score = 35.8 bits (81), Expect = 0.10
Identities = 22/97 (22%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 7 KKASKRMTCHKRYKIQKKVREHHRKLRKEA--KKRGHKKPRKDPGVPNSAPFKEALLREA 64
++ +R ++Y+ +++V++ +L +E K+R + R+ +E LLRE
Sbjct: 1128 REKRRRQELERQYREEEEVQQEEEQLLREEPEKRRRQELERQYREEEELQQEEEQLLREE 1187
Query: 65 E--LRKQRLEELKQQQKLDRQKELEKKRKLETNPDIK 99
+ R++R + +++++L RQK ++ R + D+K
Sbjct: 1188 QEKRRQERERQYREEEELQRQKRKQRYRDEDQRSDLK 1224
Score = 35.4 bits (80), Expect = 0.14
Identities = 21/93 (22%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 7 KKASKRMTCHKRYKIQKKVREHHRKLRKEA--KKRGHKKPRKDPGVPNSAPFKEALLREA 64
++ +R ++Y+ ++++++ +L +E K+R ++ R+ +E LLRE
Sbjct: 1068 RETRRRQELERQYRKEEELQQEEEQLLREEPEKRRRQERERQCREEEELQQEEEQLLRE- 1126
Query: 65 ELRKQRLEELKQQQKLDRQKELEKKRKLETNPD 97
E K+R +EL++Q + + + + E+++ L P+
Sbjct: 1127 EREKRRRQELERQYREEEEVQQEEEQLLREEPE 1159
Score = 34.7 bits (78), Expect = 0.23
Identities = 34/158 (21%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 2 KRPKLKKASKRMTCHKRYKIQKK----VREHHRKLRKEAKKRGHKKPRK----DPGVPNS 53
+R K ++ + + ++Q++ +RE K R++ ++R ++K +K + +
Sbjct: 917 EREKRRRQEQERQYREEEQLQQEEEQLLREEREKRRRQERERQYRKDKKLQQKEEQLLGE 976
Query: 54 APFKEALLREAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLC 113
P K +E E + + EEL+Q+++ ++E EK+R+ E + + E+E L
Sbjct: 977 EPEKRRR-QEREKKYREEEELQQEEEQLLREEREKRRRQEWERQYRKKDELQQEEEQLL- 1034
Query: 114 KTENKAKSGKQNSKKLYCQELKKVIEASDVVLEVLDAR 151
E + K Q ++ Y +E + E ++ E + R
Sbjct: 1035 -REEREKRRLQERERQYREEEELQQEEEQLLGEERETR 1071
Score = 33.5 bits (75), Expect = 0.52
Identities = 25/137 (18%), Positives = 68/137 (49%), Gaps = 7/137 (5%)
Query: 2 KRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFK--EA 59
+ +L++ + ++ + +++ ++LR+E + R ++ R++ + + +
Sbjct: 347 REQQLRREQEEERREQQLRREQEEERREQQLRREQQLRREQQLRREQQLRREQQLRREQQ 406
Query: 60 LLREAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKA 119
L RE +LR++ ++L+++Q+L R++E E+ + + E+ K E +
Sbjct: 407 LRREQQLRRE--QQLRREQQLRREQEEERHEQKHEQERREQRLKREQEERRDWLKREEET 464
Query: 120 KSGKQNSKKLYCQELKK 136
+ +Q +K Q+LK+
Sbjct: 465 ERHEQERRK---QQLKR 478
Score = 33.1 bits (74), Expect = 0.68
Identities = 26/135 (19%), Positives = 68/135 (50%), Gaps = 8/135 (5%)
Query: 2 KRPKLKKASKRMTCHKRYKIQKKVREHHRK-----LRKEAKKRGHKKPRKDPGVPNSAPF 56
+ +LK+ + +R + ++++R + L++E +KR ++ R+
Sbjct: 515 REQRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERREQRLKREQEER 574
Query: 57 KEALLREAELRKQRLEELKQQQKLDRQKELEKKRKLETNP--DIKPSNVEP-MEKEFGLC 113
++ LL+ E R+Q+ + +Q+++L+++ + E+ +LE + + EP E+ L
Sbjct: 575 RDQLLKREEERRQQRLKREQEERLEQRLKREEVERLEQEERREQRLKREEPEEERRQQLL 634
Query: 114 KTENKAKSGKQNSKK 128
K+E + + +Q ++
Sbjct: 635 KSEEQEERRQQQLRR 649
Score = 32.7 bits (73), Expect = 0.88
Identities = 37/179 (20%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 7 KKASKRMTCHKRYKIQKKVREHHRKLRKEA--KKRGHKKPRKDPGVPNSAPFKEALL--- 61
++ +R ++Y+ + ++++ +L +E K+R ++ R+ +E LL
Sbjct: 1008 REKRRRQEWERQYRKKDELQQEEEQLLREEREKRRLQERERQYREEEELQQEEEQLLGEE 1067
Query: 62 ----REAELRKQ--RLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKT 115
R EL +Q + EEL+Q+++ ++E EK+R+ E + E +++E
Sbjct: 1068 RETRRRQELERQYRKEEELQQEEEQLLREEPEKRRRQERERQCREE--EELQQEEEQLLR 1125
Query: 116 ENKAKSGKQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLV 174
E + K +Q ++ Y +E + E ++ E + R EE +Q +++L+
Sbjct: 1126 EEREKRRRQELERQYREEEEVQQEEEQLLREEPEKRRRQELERQYREEEELQQEEEQLL 1184
Score = 31.6 bits (70), Expect = 2.0
Identities = 21/105 (20%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Query: 5 KLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREA 64
K ++ + C + ++Q+ E + LR+E +KR ++ + +E L
Sbjct: 1100 KRRRQERERQCREEEELQQ---EEEQLLREEREKRRRQELERQYREEEEVQQEEEQLLRE 1156
Query: 65 ELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKE 109
E K+R +EL++Q + + + + E+++ L + + E +E
Sbjct: 1157 EPEKRRRQELERQYREEEELQQEEEQLLREEQEKRRQERERQYRE 1201
Score = 31.2 bits (69), Expect = 2.6
Identities = 28/128 (21%), Positives = 60/128 (46%), Gaps = 20/128 (15%)
Query: 17 KRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLE-ELK 75
+R + +K RE ++LR++ ++R + L E +LR+Q LE + +
Sbjct: 1685 RRQERDRKFREEEQQLRRQERER------------------KFLQEEQQLRRQELERKFR 1726
Query: 76 QQQKLDRQKELEKKRKLETNPDI-KPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQEL 134
++++L ++ E E+ R+ E I + + P +E L + E K ++ + +E
Sbjct: 1727 EEEQLRQETEQEQLRRQERYRKILEEEQLRPEREEQQLRRQERDRKFREEEQLRQEREEQ 1786
Query: 135 KKVIEASD 142
+ + SD
Sbjct: 1787 QLRSQESD 1794
Score = 30.8 bits (68), Expect = 3.4
Identities = 23/133 (17%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 1 MKRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEAL 60
++R + + +++ ++ + +++ H +K +E +++ K+ +++ ++ L
Sbjct: 407 LRREQQLRREQQLRREQQLRREQEEERHEQKHEQERREQRLKREQEER--------RDWL 458
Query: 61 LREAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAK 120
RE E + E KQQ K D+++E ++R L+ + + E E++ + E + +
Sbjct: 459 KREEETERHEQERRKQQLKRDQEEE-RRERWLKLEEEERREQQERREQQLRREQEERREQ 517
Query: 121 SGKQNSKKLYCQE 133
K+ ++ Q+
Sbjct: 518 RLKRQEEEERLQQ 530
Score = 30.8 bits (68), Expect = 3.4
Identities = 29/120 (24%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 20 KIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLRE--AELRKQRLEELKQQ 77
K +++ ++LR+E ++R ++ +++ ++ L RE E R+Q L E +Q+
Sbjct: 635 KSEEQEERRQQQLRREQQERREQRLKREE---EEERLEQRLKREHEEERREQELAEEEQE 691
Query: 78 QKLDRQKELEKK--RKLETNPDIKPSNV--EPMEKEFGLCKTENKAKSGKQNSKKLYCQE 133
Q +R K K +LE+ D + S V P ++E + E + K ++ S+ + +E
Sbjct: 692 QARERIKSRIPKWQWQLESEADARQSKVYSRPRKQEGQRRRQEQEEKRRRRESELQWQEE 751
Score = 30.4 bits (67), Expect = 4.4
Identities = 20/103 (19%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 22 QKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLD 81
Q++++E +LRK ++ ++ +++ ++ L RE +LR+++ EE ++QQ+ +
Sbjct: 268 QRELQEEEEQLRKLERQELRRERQEEEQQ------QQRLRREQQLRRKQEEERREQQE-E 320
Query: 82 RQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQ 124
R+++ E++ + E + + + +E L + + + + +Q
Sbjct: 321 RREQQERREQQEERREQQLRREQEERREQQLRREQEEERREQQ 363
Score = 30.4 bits (67), Expect = 4.4
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 11 KRMTCHKRYKIQKKVR-EHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQ 69
+R ++Y+ +++++ E + LR+E +KR ++ R+ ++E + + RKQ
Sbjct: 1162 RRQELERQYREEEELQQEEEQLLREEQEKRRQERERQ---------YREEEELQRQKRKQ 1212
Query: 70 RLEELKQQQKLDRQKELEKKRKLETN 95
R + Q+ L Q E EK+ + N
Sbjct: 1213 RYRDEDQRSDLKWQWEPEKENAVRDN 1238
Score = 30.4 bits (67), Expect = 4.4
Identities = 27/127 (21%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 2 KRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALL 61
+ P+ K + H++ + Q+K + ++LR++ + + ++ R F+E
Sbjct: 1511 QEPERKFLEEEQQLHRQQR-QRKFLQEEQQLRRQERGQQRRQDR-------DRKFRE--- 1559
Query: 62 REAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKS 121
E +LR++R E+ +Q+ DR+ LE+++ + K ME E L + E + +
Sbjct: 1560 -EEQLRQEREEQQLSRQERDRKFRLEEQKVRRQEQERK-----FMEDEQQLRRQEGQQQL 1613
Query: 122 GKQNSKK 128
++ +K
Sbjct: 1614 RQERDRK 1620
Score = 30.0 bits (66), Expect = 5.7
Identities = 27/116 (23%), Positives = 56/116 (48%), Gaps = 15/116 (12%)
Query: 21 IQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQK- 79
+Q + E + R++ ++R ++ R P +E L RE + +R + Q++K
Sbjct: 1267 LQHLLGEQQERDREQERRRWQQRDRHFPE-------EEQLEREEQKEAKRRDRKSQEEKQ 1319
Query: 80 LDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELK 135
L R++ EK+R+ ET+ + E+E L + E + ++ +K +EL+
Sbjct: 1320 LLREEREEKRRRQETDRKFR-------EEEQLLQEREEQPLRRQERDRKFREEELR 1368
Score = 29.6 bits (65), Expect = 7.5
Identities = 29/142 (20%), Positives = 64/142 (45%), Gaps = 20/142 (14%)
Query: 7 KKASKRMTCHKRYKIQKKVREHHRKL--------RKEAKKRGHKKPRKDPGVPNSAPFKE 58
++ +R T + + +Q+++R+ + L R+E +KR ++ + +E
Sbjct: 881 ERKRRRHTLYAKPALQEQLRKEQQLLQEEEEELQREEREKRRRQEQERQYREEEQLQQEE 940
Query: 59 ALLREAELRKQRLEELKQQQKLDRQ----------KELEKKRKLETNPDIKPSNVEPMEK 108
L E K+R +E ++Q + D++ +E EK+R+ E + K E +++
Sbjct: 941 EQLLREEREKRRRQERERQYRKDKKLQQKEEQLLGEEPEKRRRQER--EKKYREEEELQQ 998
Query: 109 EFGLCKTENKAKSGKQNSKKLY 130
E E + K +Q ++ Y
Sbjct: 999 EEEQLLREEREKRRRQEWERQY 1020
Score = 29.3 bits (64), Expect = 9.8
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 20 KIQKKVREHHRKLRKEAKKRGHKKPRKDPGVP-------NSAPFKEALLR--EAELRKQR 70
K +++ H ++ RK+ KR ++ R++ + +E LR + E R+QR
Sbjct: 459 KREEETERHEQERRKQQLKRDQEEERRERWLKLEEEERREQQERREQQLRREQEERREQR 518
Query: 71 L----EELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKE 109
L EE + QQ+L +++L ++++ +K + +E+E
Sbjct: 519 LKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQE 561
Score = 29.3 bits (64), Expect = 9.8
Identities = 21/90 (23%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 11 KRMTCHKRYKIQKKVREH-HRKLRKEAKKRGHKKPRKDPGVPNSAPFKEA---LLR---E 63
KR ++ +++++ E ++L++E +R ++ R++ + P +E LL+ +
Sbjct: 580 KREEERRQQRLKREQEERLEQRLKREEVERLEQEERREQRLKREEPEEERRQQLLKSEEQ 639
Query: 64 AELRKQRLEELKQQQKLDRQKELEKKRKLE 93
E R+Q+L +Q+++ R K E++ +LE
Sbjct: 640 EERRQQQLRREQQERREQRLKREEEEERLE 669
Score = 29.3 bits (64), Expect = 9.8
Identities = 20/80 (25%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 22 QKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLD 81
Q + +E +RK+ +E + R ++ ++ F+E E +LR++R E+ + Q+ D
Sbjct: 1739 QLRRQERYRKILEEEQLRPEREEQQLRRQERDRKFRE----EEQLRQEREEQQLRSQESD 1794
Query: 82 RQ-KELEKKRKLETNPDIKP 100
R+ +E E+ R+ ++P
Sbjct: 1795 RKFREEEQLRQEREEQQLRP 1814
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 41.6 bits (96), Expect = 0.002
Identities = 32/144 (22%), Positives = 73/144 (50%), Gaps = 15/144 (10%)
Query: 5 KLKKASKRMTCH-KRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLRE 63
K+++ KR K ++ ++K+RE K+R++ KK ++ + ++ +RE
Sbjct: 404 KIREQEKRQEQEAKMWRQEEKIREQEEKIREQEKKMWRQEEKIH---------EQEKIRE 454
Query: 64 AELRKQRLEELKQQQKLDRQKEL-EKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSG 122
E R+++ E +Q++K+ Q+E+ +K K+ I+ + +E + E K
Sbjct: 455 EEKRQEQEEMWRQEEKIREQEEIWRQKEKMHEQEKIRKQEEKVWRQEEKMHDQEEKI--- 511
Query: 123 KQNSKKLYCQELKKVIEASDVVLE 146
++ +K++ QE +K+ E + + E
Sbjct: 512 REQEEKMWRQE-EKIREQEEKIRE 534
Score = 39.7 bits (91), Expect = 0.007
Identities = 27/133 (20%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 17 KRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQ 76
K ++ ++K+RE K+R++ +K ++ +E + + ++R+Q + +Q
Sbjct: 517 KMWRQEEKIREQEEKIREQEEKIREQEEMMQEQEEKMGEQEEKMQEQEKMRRQEEKIREQ 576
Query: 77 QQKLDRQKE---------LEKKRKLETNPDIKPSNVEPM-EKEFGLCKTENKAKSG---- 122
++K+ QKE E++ K+ ++ E M E+E +C+ E K +
Sbjct: 577 EEKIREQKEKIREQEEKIWEQEEKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKM 636
Query: 123 KQNSKKLYCQELK 135
++ +K++ QE++
Sbjct: 637 RRQEEKMWEQEVR 649
Score = 33.5 bits (75), Expect = 0.52
Identities = 24/131 (18%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
Query: 7 KKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAEL 66
+K K ++ Q+K+RE K ++E K R +K R++ ++ +E ++
Sbjct: 374 EKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEK-RQEQEAKMWRQEEKIREQEEKI 432
Query: 67 RKQRLEELKQQQKLDRQKELEKKRKLETNPDI--KPSNVEPMEKEFGLCKTENKAKSGKQ 124
R+Q + +Q++K+ Q+++ ++ K + ++ + + E+ + + ++ + ++
Sbjct: 433 REQEKKMWRQEEKIHEQEKIREEEKRQEQEEMWRQEEKIREQEEIWRQKEKMHEQEKIRK 492
Query: 125 NSKKLYCQELK 135
+K++ QE K
Sbjct: 493 QEEKVWRQEEK 503
Score = 30.0 bits (66), Expect = 5.7
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
Query: 465 EEKDIHEELPKRKERKQEE-----REDDKDSDQETVDEEVDENSSGMFAAEE---TGEAL 516
EEK EE + +E++QE+ R+++K +QE E++ E M+ EE E +
Sbjct: 396 EEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQE---EKIREQEKKMWRQEEKIHEQEKI 452
Query: 517 SEETTAGEQSTRSFILDKIIEEDDAY 542
EE EQ +KI E+++ +
Sbjct: 453 REEEKRQEQEEMWRQEEKIREQEEIW 478
>gi|4503179 oral-facial-digital syndrome 1 [Homo sapiens]
Length = 1012
Score = 41.2 bits (95), Expect = 0.002
Identities = 32/128 (25%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 22 QKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLD 81
QK++ E + + ++ ++ R++ N E RE E Q + +++ K+
Sbjct: 870 QKQIEEQKEEEKIREQQVKERRQREERRQSNLQEVLERERRELEKLYQERKMIEESLKIK 929
Query: 82 RQKELEKKRKLE-TNPDIKPSNVE---PMEKEFGLCKTENKAKSGKQNSKKLYCQ-ELKK 136
+KELE + +LE +N +IK + P+EK + + E +S ++SKK+ + L
Sbjct: 930 IKKELEMENELEMSNQEIKDKSAHSENPLEKYMKIIQQEQDQESADKSSKKMVQEGSLVD 989
Query: 137 VIEASDVV 144
+++SD V
Sbjct: 990 TLQSSDKV 997
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 40.8 bits (94), Expect = 0.003
Identities = 30/134 (22%), Positives = 69/134 (51%), Gaps = 15/134 (11%)
Query: 5 KLKKASKRMTCH-KRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLRE 63
K+++ KR K ++ ++K+RE K+R++ KK ++ + ++ +RE
Sbjct: 418 KIREQEKRQEQEAKMWRQEEKIREQEEKIREQEKKMWRQEEKIH---------EQEKIRE 468
Query: 64 AELRKQRLEELKQQQKLDRQKEL--EKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKS 121
E R+++ E +Q++K+ Q+E+ +K++ E I+ + +E + + E K
Sbjct: 469 EEKRQEQEEMWRQEEKIHEQEEIWRQKEKMHEQEEKIRKQEEKVWRQEEKIREQEEKI-- 526
Query: 122 GKQNSKKLYCQELK 135
++ +K++ QE K
Sbjct: 527 -REQEEKMWRQEEK 539
Score = 34.3 bits (77), Expect = 0.30
Identities = 23/119 (19%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 22 QKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLD 81
++K+RE K+R++ + ++ + +E + + E ++ E++++Q+K
Sbjct: 625 EEKIREQEEKIREQEEMTQEQEEKMGEQEEKMCEQEEKMQEQEETMWRQEEKIREQEKKI 684
Query: 82 RQKELEKKRKLETNPDIKPSNVEPM-EKEFGLCKTENKAKSG----KQNSKKLYCQELK 135
R++E K+ ++ E M E+E +C+ E K + ++ +K++ QE++
Sbjct: 685 REQE----EKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKMRRQEEKMWEQEVR 739
Score = 33.5 bits (75), Expect = 0.52
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 15/141 (10%)
Query: 17 KRYKIQKKVREHHRKLRKEAKKRGHKK---PRKDPGVPNSAPFKEALLREAELRKQRLEE 73
K ++ ++K+RE R+E K +K K + +E +RE E + R EE
Sbjct: 532 KMWRQEEKIREQEEMWREEEKMHEQEKIWEEEKRQEQEDKMWRQEEKIREQEEKVWRQEE 591
Query: 74 LKQQQKLDRQKELEKKRKLETNPDIKPSNVEPME----------KEFGLCKTENKAKSGK 123
++Q+ RQ++ EK K E + ++ E +E E + K G+
Sbjct: 592 KIREQEEKRQEQEEKMWKQEEKIREQEEKIQEQEEKIREQEEKIREQEEMTQEQEEKMGE 651
Query: 124 QNSKKLYCQELKKVIEASDVV 144
Q K C++ +K+ E + +
Sbjct: 652 QEEK--MCEQEEKMQEQEETM 670
Score = 32.3 bits (72), Expect = 1.2
Identities = 19/92 (20%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 7 KKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAEL 66
+K K ++ Q+K+RE K ++E K R +K R++ ++ +E ++
Sbjct: 388 EKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEK-RQEQEAKMWRQEEKIREQEEKI 446
Query: 67 RKQRLEELKQQQKLDRQKELEKKRKLETNPDI 98
R+Q + +Q++K+ Q+++ ++ K + ++
Sbjct: 447 REQEKKMWRQEEKIHEQEKIREEEKRQEQEEM 478
Score = 32.3 bits (72), Expect = 1.2
Identities = 27/136 (19%), Positives = 67/136 (49%), Gaps = 7/136 (5%)
Query: 2 KRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALL 61
++ K+++ KR + ++ ++K+ E R+ K++ H++ K +E +
Sbjct: 462 EQEKIREEEKRQEQEEMWRQEEKIHEQEEIWRQ--KEKMHEQEEKIRKQEEKVWRQEEKI 519
Query: 62 REAE--LRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKA 119
RE E +R+Q + +Q++K+ Q+E+ ++ + + + E+E + + E K
Sbjct: 520 REQEEKIREQEEKMWRQEEKIREQEEMWREEEKMHEQEKIWEEEKRQEQEDKMWRQEEKI 579
Query: 120 KSGKQNSKKLYCQELK 135
++ +K++ QE K
Sbjct: 580 ---REQEEKVWRQEEK 592
Score = 30.0 bits (66), Expect = 5.7
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
Query: 465 EEKDIHEELPKRKERKQEE-----REDDKDSDQETVDEEVDENSSGMFAAEE---TGEAL 516
EEK EE + +E++QE+ R+++K +QE E++ E M+ EE E +
Sbjct: 410 EEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQE---EKIREQEKKMWRQEEKIHEQEKI 466
Query: 517 SEETTAGEQSTRSFILDKIIEEDDAY 542
EE EQ +KI E+++ +
Sbjct: 467 REEEKRQEQEEMWRQEEKIHEQEEIW 492
>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
Length = 793
Score = 40.8 bits (94), Expect = 0.003
Identities = 53/238 (22%), Positives = 98/238 (41%), Gaps = 33/238 (13%)
Query: 7 KKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNS---------APFK 57
++ S ++ H++ + + K R + R EA++R K +D + + A +
Sbjct: 245 EQGSDEISHHEKMEEEDKERAEAERARLEAEERERIKAEQDKKIADERARIEAEEKAAAQ 304
Query: 58 EALLREAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTEN 117
E REAE R++ EE K+ + ++ + E+KR E IK E+ + + E
Sbjct: 305 ERERREAEERERMREEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRIKEEEK 364
Query: 118 KAKSGKQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLIL 177
+A +Q ++ +E KV E R Q+EE + K+
Sbjct: 365 RAAEERQRARAEE-EEKAKVEEQK---------------RNKQLEEKKHAMQETKI---- 404
Query: 178 NKSDLVPKENLESWLNYLKKE---LPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSE 232
K + V ++ W+N K + L T V + + K KR K +++ F+ E
Sbjct: 405 -KGEKVEQKIEGKWVNEKKAQEDKLQTAVLKKQGEEKGTKVQAKREKLQEDKPTFKKE 461
Score = 35.8 bits (81), Expect = 0.10
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 27/198 (13%)
Query: 2 KRPKLKKASKRMTCHKRYKI---QKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKE 58
+R ++++ KR +R +I +K+ E +++++E K+ ++ R +A ++
Sbjct: 313 ERERMREEEKR-AAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQ 371
Query: 59 ALLREAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENK 118
E E K ++EE K R K+LE+K+ IK VE +K G E K
Sbjct: 372 RARAEEE-EKAKVEEQK------RNKQLEEKKHAMQETKIKGEKVE--QKIEGKWVNEKK 422
Query: 119 AKSGKQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILN 178
A+ KL LKK + + +V R+ L P ++ ++ +K+
Sbjct: 423 AQ-----EDKLQTAVLKK--QGEEKGTKVQAKREKLQEDKPTFKKEEIK--DEKI----- 468
Query: 179 KSDLVPKENLESWLNYLK 196
K D PKE ++S+++ K
Sbjct: 469 KKDKEPKEEVKSFMDRKK 486
Score = 32.0 bits (71), Expect = 1.5
Identities = 41/197 (20%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 22 QKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAP--------------------FKEALL 61
+++ R+ + ++E + G + + NS P F E L
Sbjct: 42 RRRARQERLRQKQEEESLGQVTDQVEVNAQNSVPDEEAKTTTTNTQVEGDDEAAFLERLA 101
Query: 62 REAELRKQRLEELKQQQK------LDRQKELEKKR----KLETNPDIKPSNVEPMEKEFG 111
R E R++RL+E ++QK D L +R E K E ++ +
Sbjct: 102 RREERRQKRLQEALERQKEFDPTITDASLSLPSRRMQNDTAENETTEKEEKSESRQERYE 161
Query: 112 LCKTENKAKSGKQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQ--VEEAIVQSG 169
+ +TE KS ++N + +E KK + + E R +G + VEE +S
Sbjct: 162 IEETETVTKSYQKNDWR-DAEENKKEDKEKEEEEEEKPKRGSIGENQVEVMVEEKTTESQ 220
Query: 170 QKKLVLILNKSDLVPKE 186
++ +V+ L + +E
Sbjct: 221 EETVVMSLKNGQISSEE 237
Score = 29.6 bits (65), Expect = 7.5
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 466 EKDIHEELPKRKERKQEEREDDKDSDQETVDEEVDENSSGMFAAEETGEALSEETTAGEQ 525
E + E + + ++R EER+ K+ ++ +E AAEE EE A E+
Sbjct: 310 EAEERERMREEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEE 369
Query: 526 STRS 529
R+
Sbjct: 370 RQRA 373
Score = 29.3 bits (64), Expect = 9.8
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 465 EEKDIHEELPKRKERKQEEREDDKDSDQETVDEEVDENSSGMFAAEETGEALSEETTAGE 524
EEK +E R+ R+ EERE ++ ++ +E AAEE EE A E
Sbjct: 298 EEKAAAQE---RERREAEERERMREEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAE 354
Query: 525 QSTR 528
+ R
Sbjct: 355 ERQR 358
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 40.8 bits (94), Expect = 0.003
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 464 IEEKDIHEEL---PKRKERKQEEREDDKDSDQETVDEEVDENSSGMFAAEETGEALSEET 520
+E +H E+ P+ +E ++EE E+D++S++E +E E S G +E E +S+E
Sbjct: 518 VEGNKVHIEVKENPEEEEEEEEEEEEDEESEEEEEEEGESEGSEG----DEEDEKVSDEK 573
Query: 521 TAGEQSTRSFILDKIIEEDDAYDFSTD 547
+G+ + K + D YD D
Sbjct: 574 DSGKTLDKK--PSKEMSSDSEYDSDDD 598
Score = 39.3 bits (90), Expect = 0.009
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Query: 26 REHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEAL--LREAELRKQRLEELKQQQKLDRQ 83
++ +K +K K+ K+ +K P +EAL L+E E R++R EE +++ R
Sbjct: 314 KKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEE----ERIKRL 369
Query: 84 KELEKKRK----LETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELKKVIE 139
+ELE KRK LE + E KE K E K + Q + + K+++
Sbjct: 370 EELEAKRKEEERLEQEKRERKKQKEKERKE--RLKKEGKLLTKSQREARARAEATLKLLQ 427
Query: 140 ASDVVLEVLDA 150
A V + D+
Sbjct: 428 AQGVEVPSKDS 438
Score = 30.4 bits (67), Expect = 4.4
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 465 EEKDIHEELPKRKERKQEEREDDKDSDQETVDEEVDENSSGMFAAEETGEALSEETTAGE 524
EE++ EE + +E ++EE E + E ++ DE SG ++ + +S ++
Sbjct: 536 EEEEEEEEDEESEEEEEEEGESEGSEGDEEDEKVSDEKDSGKTLDKKPSKEMSSDSEYDS 595
Query: 525 QSTRSFILDKIIEEDDAYD 543
R+ +E+ AYD
Sbjct: 596 DDDRT-------KEERAYD 607
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 40.8 bits (94), Expect = 0.003
Identities = 28/135 (20%), Positives = 59/135 (43%), Gaps = 9/135 (6%)
Query: 3 RPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLR 62
R K + +SK + KR + + + R H+R ++ +R K P K +
Sbjct: 313 RSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSH 372
Query: 63 EAELRKQRLEELKQQQKL---------DRQKELEKKRKLETNPDIKPSNVEPMEKEFGLC 113
+ RK E++K+++++ +R+KE EK+++ N D + EK+
Sbjct: 373 SRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKD 432
Query: 114 KTENKAKSGKQNSKK 128
+ + K +++ K
Sbjct: 433 REREREKEHEKDRDK 447
Score = 37.0 bits (84), Expect = 0.047
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 3 RPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLR 62
R + KR ++ K +++V+E R+ +E +K K+ K+ G + R
Sbjct: 368 RSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKE--KERGKNKDRDKEREKDR 425
Query: 63 EAELRKQRLEELKQQQKLDRQKELEKKRKLE 93
E + K R E +++ + DR KE EK++ E
Sbjct: 426 EKDKEKDREREREKEHEKDRDKEKEKEQDKE 456
Score = 36.2 bits (82), Expect = 0.080
Identities = 31/138 (22%), Positives = 62/138 (44%), Gaps = 15/138 (10%)
Query: 2 KRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALL 61
K + K+ + R + + + R H R RK+ +++ +K R ++
Sbjct: 346 KDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVK---------EKDRE 396
Query: 62 REAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKS 121
+E E K+R +E ++ + DR KE EK R+ + D + + EK+ +K K
Sbjct: 397 KEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKD------RDKEKE 450
Query: 122 GKQNSKKLYCQELKKVIE 139
+Q+ +K ++ K I+
Sbjct: 451 KEQDKEKEREKDRSKEID 468
Score = 36.2 bits (82), Expect = 0.080
Identities = 26/142 (18%), Positives = 62/142 (43%), Gaps = 12/142 (8%)
Query: 7 KKASKRMTCHKRYKIQKKVREHHRKLRKEAKK---RGHKKPR---------KDPGVPNSA 54
K+ R ++ ++++K RE R+ KE +K RG K R KD
Sbjct: 376 KRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDRER 435
Query: 55 PFKEALLREAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCK 114
++ ++ + K++ ++ +++++ DR KE+++KRK + P + + +
Sbjct: 436 EREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSR 495
Query: 115 TENKAKSGKQNSKKLYCQELKK 136
+ +S + + +K+
Sbjct: 496 ERRRRRSRSSSRSPRTSKTIKR 517
Score = 35.8 bits (81), Expect = 0.10
Identities = 27/126 (21%), Positives = 56/126 (44%), Gaps = 16/126 (12%)
Query: 3 RPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLR 62
R + K S+ + KR ++K++E R K+ +K ++ R
Sbjct: 362 RERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKE----------------R 405
Query: 63 EAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSG 122
E E + + ++ ++++ DR+K+ EK R+ E + + + EKE K K +S
Sbjct: 406 EKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSK 465
Query: 123 KQNSKK 128
+ + K+
Sbjct: 466 EIDEKR 471
Score = 35.0 bits (79), Expect = 0.18
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Query: 12 RMTCHKRYKIQKKVREHHRKLRKEAK--KRGHKKPR---KDPGVPNSAPFKEALLREAEL 66
R H R K + + H R+ R ++K R H + R KD S K + RE
Sbjct: 307 RSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRK 366
Query: 67 RKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNS 126
+ R + ++K R+K EK+R E + + + + EKE K +++ K +++
Sbjct: 367 SRSR-SHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDR 425
Query: 127 KK 128
+K
Sbjct: 426 EK 427
Score = 29.6 bits (65), Expect = 7.5
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 464 IEEKDIHEELPKRKER-KQEEREDDKDSDQE-TVDEEVDENSSGMFAAEETGEALSEETT 521
++EKD +E + KER K++ER +KD D+E D E D+ E+ E ++
Sbjct: 390 VKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEK 449
Query: 522 AGEQ 525
EQ
Sbjct: 450 EKEQ 453
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 40.8 bits (94), Expect = 0.003
Identities = 28/135 (20%), Positives = 59/135 (43%), Gaps = 9/135 (6%)
Query: 3 RPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLR 62
R K + +SK + KR + + + R H+R ++ +R K P K +
Sbjct: 197 RSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSH 256
Query: 63 EAELRKQRLEELKQQQKL---------DRQKELEKKRKLETNPDIKPSNVEPMEKEFGLC 113
+ RK E++K+++++ +R+KE EK+++ N D + EK+
Sbjct: 257 SRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKD 316
Query: 114 KTENKAKSGKQNSKK 128
+ + K +++ K
Sbjct: 317 REREREKEHEKDRDK 331
Score = 37.0 bits (84), Expect = 0.047
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 3 RPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLR 62
R + KR ++ K +++V+E R+ +E +K K+ K+ G + R
Sbjct: 252 RSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKE--KERGKNKDRDKEREKDR 309
Query: 63 EAELRKQRLEELKQQQKLDRQKELEKKRKLE 93
E + K R E +++ + DR KE EK++ E
Sbjct: 310 EKDKEKDREREREKEHEKDRDKEKEKEQDKE 340
Score = 36.2 bits (82), Expect = 0.080
Identities = 31/138 (22%), Positives = 62/138 (44%), Gaps = 15/138 (10%)
Query: 2 KRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALL 61
K + K+ + R + + + R H R RK+ +++ +K R ++
Sbjct: 230 KDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVK---------EKDRE 280
Query: 62 REAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKS 121
+E E K+R +E ++ + DR KE EK R+ + D + + EK+ +K K
Sbjct: 281 KEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKD------RDKEKE 334
Query: 122 GKQNSKKLYCQELKKVIE 139
+Q+ +K ++ K I+
Sbjct: 335 KEQDKEKEREKDRSKEID 352
Score = 36.2 bits (82), Expect = 0.080
Identities = 26/142 (18%), Positives = 62/142 (43%), Gaps = 12/142 (8%)
Query: 7 KKASKRMTCHKRYKIQKKVREHHRKLRKEAKK---RGHKKPR---------KDPGVPNSA 54
K+ R ++ ++++K RE R+ KE +K RG K R KD
Sbjct: 260 KRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDRER 319
Query: 55 PFKEALLREAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCK 114
++ ++ + K++ ++ +++++ DR KE+++KRK + P + + +
Sbjct: 320 EREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSR 379
Query: 115 TENKAKSGKQNSKKLYCQELKK 136
+ +S + + +K+
Sbjct: 380 ERRRRRSRSSSRSPRTSKTIKR 401
Score = 35.8 bits (81), Expect = 0.10
Identities = 27/126 (21%), Positives = 56/126 (44%), Gaps = 16/126 (12%)
Query: 3 RPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLR 62
R + K S+ + KR ++K++E R K+ +K ++ R
Sbjct: 246 RERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKE----------------R 289
Query: 63 EAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSG 122
E E + + ++ ++++ DR+K+ EK R+ E + + + EKE K K +S
Sbjct: 290 EKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSK 349
Query: 123 KQNSKK 128
+ + K+
Sbjct: 350 EIDEKR 355
Score = 35.0 bits (79), Expect = 0.18
Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Query: 12 RMTCHKRYKIQKKVREHHRKLRKEAK--KRGHKKPR---KDPGVPNSAPFKEALLREAEL 66
R H R K + + H R+ R ++K R H + R KD S K + RE
Sbjct: 191 RSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRK 250
Query: 67 RKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNS 126
+ R + ++K R+K EK+R E + + + + EKE K +++ K +++
Sbjct: 251 SRSR-SHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDR 309
Query: 127 KK 128
+K
Sbjct: 310 EK 311
Score = 29.6 bits (65), Expect = 7.5
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 464 IEEKDIHEELPKRKER-KQEEREDDKDSDQE-TVDEEVDENSSGMFAAEETGEALSEETT 521
++EKD +E + KER K++ER +KD D+E D E D+ E+ E ++
Sbjct: 274 VKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEK 333
Query: 522 AGEQ 525
EQ
Sbjct: 334 EKEQ 337
>gi|24308223 hypothetical protein LOC57577 [Homo sapiens]
Length = 936
Score = 40.8 bits (94), Expect = 0.003
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 28/197 (14%)
Query: 7 KKASKRMTCHKRYKIQKK---VREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLRE 63
+K + MT H K ++ R R++ E KK K ++ A +E RE
Sbjct: 646 RKPKQLMTPHPILKAMEERAIQRAECRRILAEKKK----KQEEEKLAQLKAQEEERQKRE 701
Query: 64 AELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGK 123
AE ++ +LE +++++L + KELEK+++++ N ++ E E+ K G
Sbjct: 702 AEEKEAQLERKREEKRLKKMKELEKQKRIKRNQQLEAIAKEHYERVL-------LRKKGL 754
Query: 124 QNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSD-- 181
+ K+L Q + + A + L + L Q Q+ L + ++D
Sbjct: 755 EPWKRLRMQSKQNIQVAEEHYSLFLQRKYML---------TWFQRSQESLARKMAQADQF 805
Query: 182 ---LVPKENLESWLNYL 195
++ K ++SWL Y+
Sbjct: 806 YSQILLKRVIQSWLQYV 822
Score = 29.3 bits (64), Expect = 9.8
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 37 KKRGHKKPRKDPGVPNSAPFKEA----LLREAELRKQRLEE-LKQQQKLDRQ--KELEKK 89
K+ KK +KDP + K+ L RE EL QR+E+ LK+ L+ Q + EKK
Sbjct: 177 KENQDKKQQKDPRLTMEMRHKQVKENRLRREKELEYQRIEKTLKKSAFLEAQCLVQEEKK 236
Query: 90 RK 91
RK
Sbjct: 237 RK 238
>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
Length = 1759
Score = 40.0 bits (92), Expect = 0.006
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 442 AIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERKQEEREDDKDSDQETVDEEVDE 501
A GP + ++G ++ EE+++ ELP+ + E+ +DD+D D E DE+ D+
Sbjct: 1655 AAPGPREGAAAAAAAAGESSQEDEEEEL--ELPEEEAEDDEDEDDDEDDDDEDDDEDDDD 1712
Query: 502 NSSGMFAAEETGEALSEETTAGEQS 526
+ E EA +E AG ++
Sbjct: 1713 EDLRTDSEESLPEAAAEAAGAGART 1737
>gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]
Length = 484
Score = 39.7 bits (91), Expect = 0.007
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Query: 2 KRPKLKKASKRMTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVP------NSAP 55
K K KK SK T K Y ++ R R+ R+ + G + P+K P P + +P
Sbjct: 315 KEDKEKKRSK--TPPKSYSTARRSRSASRERRRRRSRSGTRSPKK-PRSPKRKLSRSPSP 371
Query: 56 FKEALLREAELRKQRLEELKQ----QQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFG 111
+ ++ + K+R + ++ ++K + KE +++RK E++ D+K + E+E G
Sbjct: 372 RRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVKQVTRDYDEEEQG 431
Query: 112 LCKTENKAKSGK 123
+ K + K
Sbjct: 432 YDSEKEKKEEKK 443
Score = 32.3 bits (72), Expect = 1.2
Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 7 KKASKRMTCHKRYKIQKK---VREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLRE 63
KK KR R + +++ HR+ R +++R H K R + K R
Sbjct: 241 KKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSR------SRRRSKSPRRRR 294
Query: 64 AELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGK 123
+ R++ + D++KE ++K++ +T P K + + + +++SG
Sbjct: 295 SHSRERGRRSRSTSKTRDKKKEDKEKKRSKTPP--KSYSTARRSRSASRERRRRRSRSGT 352
Query: 124 QNSKK 128
++ KK
Sbjct: 353 RSPKK 357
>gi|148806928 hypothetical protein LOC57482 [Homo sapiens]
Length = 1233
Score = 39.7 bits (91), Expect = 0.007
Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 11/132 (8%)
Query: 2 KRPKLKKASKRMTCHKRYK-IQKKVREHHRKLR--------KEAKKRGHKKPRKDPGVPN 52
KR K + A KR +R + +++++ E +R+ +E + PR++
Sbjct: 236 KRQKAEAAEKRRLEEQRLQALERRLWEENRRQELLEEEGEGQEPPLEAERAPREEQQRSL 295
Query: 53 SAPFKEALLREAELRKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGL 112
AP E R ++RLE +++++L Q + E++R+LE D + E+E G
Sbjct: 296 EAPGWEDAERREREERERLEAEEERRRLQAQAQAEERRRLE--EDARLEERRRQEEEEGR 353
Query: 113 CKTENKAKSGKQ 124
C E K + ++
Sbjct: 354 CAEELKRQEEEE 365
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.130 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,413,824
Number of Sequences: 37866
Number of extensions: 1027662
Number of successful extensions: 11832
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 411
Number of HSP's that attempted gapping in prelim test: 7706
Number of HSP's gapped (non-prelim): 3353
length of query: 549
length of database: 18,247,518
effective HSP length: 107
effective length of query: 442
effective length of database: 14,195,856
effective search space: 6274568352
effective search space used: 6274568352
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.