Guide to the Human Genome
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Name: HPR Sequence: fasta or formatted (348aa) NCBI GI: 45580723
Description:

haptoglobin-related protein

Referenced in:

Additional Host Defense Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         24           2
 C cysteine            2.6          9           1
 D aspartate           5.7         20           2
 E glutamate           5.2         18           2
 F phenylalanine       2.6          9           1
 G glycine             7.2         25           2
 H histidine           3.4         12           2
 I isoleucine          4.6         16           1
 K lysine              8.0         28           2
 L leucine             9.2         32           3
 M methionine          1.4          5           1
 N asparagine          5.2         18           1
 P proline             4.9         17           2
 Q glutamine           4.3         15           1
 R arginine            2.3          8           1
 S serine              4.9         17           1
 T threonine           5.5         19           2
 V valine              8.6         30           2
 W tryptophan          2.3          8           1
 Y tyrosine            5.2         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   haptoglobin-related protein 
HP                    0.892   haptoglobin isoform 2 preproprotein 
HP                    0.834   haptoglobin isoform 1 preproprotein 
C1R                   0.209   complement component 1, r subcomponent 
C1S                   0.186   complement component 1, s subcomponent precursor [Hom...
C1S                   0.186   complement component 1, s subcomponent precursor [Ho...
MASP1                 0.163   mannan-binding lectin serine protease 1 isoform 2 pr...
MASP2                 0.163   mannan-binding lectin serine protease 2 isoform 1 pr...
MASP1                 0.158   mannan-binding lectin serine protease 1 isoform 1 pr...
C1RL                  0.148   complement component 1, r subcomponent-like precursor...
F7                    0.138   coagulation factor VII isoform b precursor 
F7                    0.138   coagulation factor VII isoform a precursor 
ESSPL                 0.126   epidermis-specific serine protease-like protein [Ho...
F10                   0.114   coagulation factor X preproprotein 
PRSS27                0.111   marapsin 
F9                    0.107   coagulation factor IX preproprotein 
TMPRSS9               0.107   transmembrane protease, serine 9 
TMPRSS6               0.105   transmembrane protease, serine 6 
UNQ9391               0.105   hypothetical protein LOC203074 
PLG                   0.102   plasminogen 
PRSS8                 0.101   prostasin preproprotein 
F2                    0.099   coagulation factor II preproprotein 
PROC                  0.099   protein C 
TMPRSS11E             0.098   transmembrane protease, serine 11E 
TMPRSS11E2            0.098   transmembrane protease, serine 11E2 
PRSS1                 0.097   protease, serine, 1 preproprotein 
PRSS2                 0.097   protease, serine, 2 preproprotein 
PRSS3                 0.095   mesotrypsin isoform 1 preproprotein 
TMPRSS11D             0.095   transmembrane protease, serine 11D 
TMPRSS5               0.094   transmembrane protease, serine 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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