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Search of human proteins with 132566680
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|132566680 scavenger receptor class B, member 1 isoform 2
[Homo sapiens]
(506 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|132566680 scavenger receptor class B, member 1 isoform 2 [Hom... 1040 0.0
gi|132566684 scavenger receptor class B, member 1 isoform 1 [Hom... 957 0.0
gi|5031631 scavenger receptor class B, member 2 [Homo sapiens] 285 9e-77
gi|188536065 CD36 antigen [Homo sapiens] 274 2e-73
gi|188536063 CD36 antigen [Homo sapiens] 274 2e-73
gi|48375178 CD36 antigen [Homo sapiens] 274 2e-73
gi|48375176 CD36 antigen [Homo sapiens] 274 2e-73
gi|48375180 CD36 antigen [Homo sapiens] 274 2e-73
gi|194272142 myosin IXB isoform 2 [Homo sapiens] 34 0.36
gi|33356170 myosin IXB isoform 1 [Homo sapiens] 34 0.36
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 33 0.47
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 33 0.61
gi|158534059 formin binding protein 4 [Homo sapiens] 32 1.0
gi|114155127 regulator of G-protein signalling 3 isoform 6 [Homo... 32 1.8
gi|10864075 regulator of G-protein signalling 3 isoform 2 [Homo ... 32 1.8
gi|62865651 regulator of G-protein signalling 3 isoform 1 [Homo ... 32 1.8
gi|169167066 PREDICTED: hypothetical protein [Homo sapiens] 32 1.8
gi|113416187 PREDICTED: hypothetical protein [Homo sapiens] 32 1.8
gi|113415691 PREDICTED: hypothetical protein [Homo sapiens] 32 1.8
gi|32481209 mitogen-activated protein kinase-activated protein k... 32 1.8
gi|10863901 mitogen-activated protein kinase-activated protein k... 32 1.8
gi|62177127 myosin heavy chain Myr 8 [Homo sapiens] 32 1.8
gi|46909594 a disintegrin and metalloproteinase domain 15 isofor... 31 2.3
gi|44662836 breast cancer anti-estrogen resistance 1 [Homo sapiens] 31 2.3
gi|239756225 PREDICTED: similar to breast cancer anti-estrogen r... 31 3.0
gi|239750776 PREDICTED: similar to breast cancer anti-estrogen r... 31 3.0
gi|239745060 PREDICTED: similar to breast cancer anti-estrogen r... 31 3.0
gi|239745044 PREDICTED: similar to breast cancer anti-estrogen r... 31 3.0
gi|55750053 atrophin-1 [Homo sapiens] 31 3.0
gi|55750041 atrophin-1 [Homo sapiens] 31 3.0
>gi|132566680 scavenger receptor class B, member 1 isoform 2 [Homo
sapiens]
Length = 506
Score = 1040 bits (2690), Expect = 0.0
Identities = 506/506 (100%), Positives = 506/506 (100%)
Query: 1 MGCSAKARWAAGALGVAGLLCAVLGAVMIVMVPSLIKQQVLKNVRIDPSSLSFNMWKEIP 60
MGCSAKARWAAGALGVAGLLCAVLGAVMIVMVPSLIKQQVLKNVRIDPSSLSFNMWKEIP
Sbjct: 1 MGCSAKARWAAGALGVAGLLCAVLGAVMIVMVPSLIKQQVLKNVRIDPSSLSFNMWKEIP 60
Query: 61 IPFYLSVYFFDVMNPSEILKGEKPQVRERGPYVYREFRHKSNITFNNNDTVSFLEYRTFQ 120
IPFYLSVYFFDVMNPSEILKGEKPQVRERGPYVYREFRHKSNITFNNNDTVSFLEYRTFQ
Sbjct: 61 IPFYLSVYFFDVMNPSEILKGEKPQVRERGPYVYREFRHKSNITFNNNDTVSFLEYRTFQ 120
Query: 121 FQPSKSHGSESDYIVMPNILVLGAAVMMENKPMTLKLIMTLAFTTLGERAFMNRTVGEIM 180
FQPSKSHGSESDYIVMPNILVLGAAVMMENKPMTLKLIMTLAFTTLGERAFMNRTVGEIM
Sbjct: 121 FQPSKSHGSESDYIVMPNILVLGAAVMMENKPMTLKLIMTLAFTTLGERAFMNRTVGEIM 180
Query: 181 WGYKDPLVNLINKYFPGMFPFKDKFGLFAELNNSDSGLFTVFTGVQNISRIHLVDKWNGL 240
WGYKDPLVNLINKYFPGMFPFKDKFGLFAELNNSDSGLFTVFTGVQNISRIHLVDKWNGL
Sbjct: 181 WGYKDPLVNLINKYFPGMFPFKDKFGLFAELNNSDSGLFTVFTGVQNISRIHLVDKWNGL 240
Query: 241 SKVDFWHSDQCNMINGTSGQMWPPFMTPESSLEFYSPEACRSMKLMYKESGVFEGIPTYR 300
SKVDFWHSDQCNMINGTSGQMWPPFMTPESSLEFYSPEACRSMKLMYKESGVFEGIPTYR
Sbjct: 241 SKVDFWHSDQCNMINGTSGQMWPPFMTPESSLEFYSPEACRSMKLMYKESGVFEGIPTYR 300
Query: 301 FVAPKTLFANGSIYPPNEGFCPCLESGIQNVSTCRFSAPLFLSHPHFLNADPVLAEAVTG 360
FVAPKTLFANGSIYPPNEGFCPCLESGIQNVSTCRFSAPLFLSHPHFLNADPVLAEAVTG
Sbjct: 301 FVAPKTLFANGSIYPPNEGFCPCLESGIQNVSTCRFSAPLFLSHPHFLNADPVLAEAVTG 360
Query: 361 LHPNQEAHSLFLDIHPVTGIPMNCSVKLQLSLYMKSVAGIGQTGKIEPVVLPLLWFAESG 420
LHPNQEAHSLFLDIHPVTGIPMNCSVKLQLSLYMKSVAGIGQTGKIEPVVLPLLWFAESG
Sbjct: 361 LHPNQEAHSLFLDIHPVTGIPMNCSVKLQLSLYMKSVAGIGQTGKIEPVVLPLLWFAESG 420
Query: 421 AMEGETLHTFYTQLVLMPKVMHYAQYVLLALGCVLLLVPVICQIRSQGPEDTVSQPGLAA 480
AMEGETLHTFYTQLVLMPKVMHYAQYVLLALGCVLLLVPVICQIRSQGPEDTVSQPGLAA
Sbjct: 421 AMEGETLHTFYTQLVLMPKVMHYAQYVLLALGCVLLLVPVICQIRSQGPEDTVSQPGLAA 480
Query: 481 GPDRPPSPYTPLLPDSPSGQPPSPTA 506
GPDRPPSPYTPLLPDSPSGQPPSPTA
Sbjct: 481 GPDRPPSPYTPLLPDSPSGQPPSPTA 506
>gi|132566684 scavenger receptor class B, member 1 isoform 1 [Homo
sapiens]
Length = 509
Score = 957 bits (2474), Expect = 0.0
Identities = 467/467 (100%), Positives = 467/467 (100%)
Query: 1 MGCSAKARWAAGALGVAGLLCAVLGAVMIVMVPSLIKQQVLKNVRIDPSSLSFNMWKEIP 60
MGCSAKARWAAGALGVAGLLCAVLGAVMIVMVPSLIKQQVLKNVRIDPSSLSFNMWKEIP
Sbjct: 1 MGCSAKARWAAGALGVAGLLCAVLGAVMIVMVPSLIKQQVLKNVRIDPSSLSFNMWKEIP 60
Query: 61 IPFYLSVYFFDVMNPSEILKGEKPQVRERGPYVYREFRHKSNITFNNNDTVSFLEYRTFQ 120
IPFYLSVYFFDVMNPSEILKGEKPQVRERGPYVYREFRHKSNITFNNNDTVSFLEYRTFQ
Sbjct: 61 IPFYLSVYFFDVMNPSEILKGEKPQVRERGPYVYREFRHKSNITFNNNDTVSFLEYRTFQ 120
Query: 121 FQPSKSHGSESDYIVMPNILVLGAAVMMENKPMTLKLIMTLAFTTLGERAFMNRTVGEIM 180
FQPSKSHGSESDYIVMPNILVLGAAVMMENKPMTLKLIMTLAFTTLGERAFMNRTVGEIM
Sbjct: 121 FQPSKSHGSESDYIVMPNILVLGAAVMMENKPMTLKLIMTLAFTTLGERAFMNRTVGEIM 180
Query: 181 WGYKDPLVNLINKYFPGMFPFKDKFGLFAELNNSDSGLFTVFTGVQNISRIHLVDKWNGL 240
WGYKDPLVNLINKYFPGMFPFKDKFGLFAELNNSDSGLFTVFTGVQNISRIHLVDKWNGL
Sbjct: 181 WGYKDPLVNLINKYFPGMFPFKDKFGLFAELNNSDSGLFTVFTGVQNISRIHLVDKWNGL 240
Query: 241 SKVDFWHSDQCNMINGTSGQMWPPFMTPESSLEFYSPEACRSMKLMYKESGVFEGIPTYR 300
SKVDFWHSDQCNMINGTSGQMWPPFMTPESSLEFYSPEACRSMKLMYKESGVFEGIPTYR
Sbjct: 241 SKVDFWHSDQCNMINGTSGQMWPPFMTPESSLEFYSPEACRSMKLMYKESGVFEGIPTYR 300
Query: 301 FVAPKTLFANGSIYPPNEGFCPCLESGIQNVSTCRFSAPLFLSHPHFLNADPVLAEAVTG 360
FVAPKTLFANGSIYPPNEGFCPCLESGIQNVSTCRFSAPLFLSHPHFLNADPVLAEAVTG
Sbjct: 301 FVAPKTLFANGSIYPPNEGFCPCLESGIQNVSTCRFSAPLFLSHPHFLNADPVLAEAVTG 360
Query: 361 LHPNQEAHSLFLDIHPVTGIPMNCSVKLQLSLYMKSVAGIGQTGKIEPVVLPLLWFAESG 420
LHPNQEAHSLFLDIHPVTGIPMNCSVKLQLSLYMKSVAGIGQTGKIEPVVLPLLWFAESG
Sbjct: 361 LHPNQEAHSLFLDIHPVTGIPMNCSVKLQLSLYMKSVAGIGQTGKIEPVVLPLLWFAESG 420
Query: 421 AMEGETLHTFYTQLVLMPKVMHYAQYVLLALGCVLLLVPVICQIRSQ 467
AMEGETLHTFYTQLVLMPKVMHYAQYVLLALGCVLLLVPVICQIRSQ
Sbjct: 421 AMEGETLHTFYTQLVLMPKVMHYAQYVLLALGCVLLLVPVICQIRSQ 467
>gi|5031631 scavenger receptor class B, member 2 [Homo sapiens]
Length = 478
Score = 285 bits (728), Expect = 9e-77
Identities = 157/465 (33%), Positives = 256/465 (55%), Gaps = 17/465 (3%)
Query: 15 GVAGLLCAVLGAVMIV--MVPSLIKQQVLKNVRIDPSSLSFNMWKEIPIPFYLSVYFFDV 72
G LL V ++V + + Q + K + + + +F+ W++ P+P Y YFF+V
Sbjct: 10 GTLSLLLLVTSVTLLVARVFQKAVDQSIEKKIVLRNGTEAFDSWEKPPLPVYTQFYFFNV 69
Query: 73 MNPSEILKGEKPQVRERGPYVYREFRHKSNITFNNNDT-VSFLEYRTFQFQPSKSHGSES 131
NP EIL+GE P+V E GPY YRE R+K+NI F +N T +S + + + F+ +S G
Sbjct: 70 TNPEEILRGETPRVEEVGPYTYRELRNKANIQFGDNGTTISAVSNKAYVFERDQSVGDPK 129
Query: 132 -DYIVMPNILVLGAAVMMENKPMTLKLIMTLAFTTLGERAFMNRTVGEIMWGYKDPLVNL 190
D I NI VL V+ ++ L+ I+ ++ F+ TV E++WGYKD +++L
Sbjct: 130 IDLIRTLNIPVL--TVIEWSQVHFLREIIEAMLKAYQQKLFVTHTVDELLWGYKDEILSL 187
Query: 191 INKYFPGMFPFKDKFGLFAELNNSDSGLFTVFTGVQNISRIHLVDKWNGLSKVDFWHSDQ 250
I+ + P + P+ FGLF E N ++ G + TG + + +WNG + +D+W +D+
Sbjct: 188 IHVFRPDISPY---FGLFYEKNGTNDGDYVFLTGEDSYLNFTKIVEWNGKTSLDWWITDK 244
Query: 251 CNMINGTSGQMWPPFMTPESSLEFYSPEACRSMKLMYKESGVFEGIPTYRFVAPKTLFAN 310
CNMINGT G + P +T + L + + CRS+ + + + +G+P +R+ P + AN
Sbjct: 245 CNMINGTDGDSFHPLITKDEVLYVFPSDFCRSVYITFSDYESVQGLPAFRYKVPAEILAN 304
Query: 311 GSIYPPNEGFC----PCLESGIQNVSTCRFSAPLFLSHPHFLNADPVLAEAVTGLHPNQE 366
S N GFC CL SG+ NVS C+ AP+ +S PHF AD A+ G+HPNQE
Sbjct: 305 TS---DNAGFCIPEGNCLGSGVLNVSICKNGAPIIMSFPHFYQADERFVSAIEGMHPNQE 361
Query: 367 AHSLFLDIHPVTGIPMNCSVKLQLSLYMKSVAGIGQTGKIEPVVLPLLWFAESGAMEGET 426
H F+DI+P+TGI + + + Q+++Y+K + +TG I +V P+++ ES ++ ET
Sbjct: 362 DHETFVDINPLTGIILKAAKRFQINIYVKKLDDFVETGDIRTMVFPVMYLNESVHIDKET 421
Query: 427 LHTFYTQLVLMPKVMHYAQYVLLALGCVLLLVPVICQIRSQGPED 471
++ ++ Y+++ALG LV + QG D
Sbjct: 422 ASRL-KSMINTTLIITNIPYIIMALGVFFGLVFTWLACKGQGSMD 465
>gi|188536065 CD36 antigen [Homo sapiens]
Length = 472
Score = 274 bits (700), Expect = 2e-73
Identities = 156/480 (32%), Positives = 261/480 (54%), Gaps = 24/480 (5%)
Query: 1 MGCSAKARWAAGALGVAGLLCAVLGAVMIVMVPSLIKQQVLKNVRIDPSSLSFNMWKEIP 60
MGC AGA V G + AV G +++ + LI++ + K V ++ +++F W +
Sbjct: 1 MGCDRNCGLIAGA--VIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTG 58
Query: 61 IPFYLSVYFFDVMNPSEILKGEKP-QVRERGPYVYR-EFRHKSNITFNNND-TVSFLEYR 117
Y + FDV NP E++ QV++RGPY YR F K N+T + D TVSFL+
Sbjct: 59 TEVYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPN 118
Query: 118 TFQFQPSKSHGSESDYIVMPNILVLGAAVMMENKPMTLKLIMTLAFTTLGERAFMNRTVG 177
F+PS S G+E+D + N+ V A+ + +N+ +++I+ F RT+
Sbjct: 119 GAIFEPSLSVGTEADNFTVLNLAVAAASHIYQNQ--FVQMILNSLINKSKSSMFQVRTLR 176
Query: 178 EIMWGYKDPLVNLINKYFPGMFPFKDKFGLFAELNNSDSGLFTVFTGVQNISRIHLVDKW 237
E++WGY+DP ++L+ +P GLF NN+ G++ VF G NIS++ ++D +
Sbjct: 177 ELLWGYRDPFLSLVP------YPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTY 230
Query: 238 NGLSKVDFWHSDQCNMINGTSGQMWPPFMTPESSLEFYSPEACRSMKLMYKESGVFEGIP 297
G + +W S C+MINGT +PPF+ L+F+S + CRS+ +++ +GIP
Sbjct: 231 KGKRNLSYWES-HCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIP 289
Query: 298 TYRFVAPKTLFANGSIYPPNEGFCP-------CLESGIQNVSTCRFSAPLFLSHPHFLNA 350
YRFV P FA+ P N FC C G+ ++S C+ P+++S PHFL A
Sbjct: 290 VYRFVLPSKAFASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYA 349
Query: 351 DPVLAEAVTGLHPNQEAHSLFLDIHPVTGIPMNCSVKLQLSLYMKSVAGIGQTGKIE-PV 409
P ++E + GL+PN+E H +LDI P+TG + + +LQ++L +K I ++
Sbjct: 350 SPDVSEPIDGLNPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNY 409
Query: 410 VLPLLWFAESGAMEGETLHTFYTQLVLMPKVMHYAQYVLLALGCVLLLVPVI--CQIRSQ 467
++P+LW E+G + E + F +Q+ ++ + +LL++G V+ + +I C RS+
Sbjct: 410 IVPILWLNETGTIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSK 469
>gi|188536063 CD36 antigen [Homo sapiens]
Length = 472
Score = 274 bits (700), Expect = 2e-73
Identities = 156/480 (32%), Positives = 261/480 (54%), Gaps = 24/480 (5%)
Query: 1 MGCSAKARWAAGALGVAGLLCAVLGAVMIVMVPSLIKQQVLKNVRIDPSSLSFNMWKEIP 60
MGC AGA V G + AV G +++ + LI++ + K V ++ +++F W +
Sbjct: 1 MGCDRNCGLIAGA--VIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTG 58
Query: 61 IPFYLSVYFFDVMNPSEILKGEKP-QVRERGPYVYR-EFRHKSNITFNNND-TVSFLEYR 117
Y + FDV NP E++ QV++RGPY YR F K N+T + D TVSFL+
Sbjct: 59 TEVYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPN 118
Query: 118 TFQFQPSKSHGSESDYIVMPNILVLGAAVMMENKPMTLKLIMTLAFTTLGERAFMNRTVG 177
F+PS S G+E+D + N+ V A+ + +N+ +++I+ F RT+
Sbjct: 119 GAIFEPSLSVGTEADNFTVLNLAVAAASHIYQNQ--FVQMILNSLINKSKSSMFQVRTLR 176
Query: 178 EIMWGYKDPLVNLINKYFPGMFPFKDKFGLFAELNNSDSGLFTVFTGVQNISRIHLVDKW 237
E++WGY+DP ++L+ +P GLF NN+ G++ VF G NIS++ ++D +
Sbjct: 177 ELLWGYRDPFLSLVP------YPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTY 230
Query: 238 NGLSKVDFWHSDQCNMINGTSGQMWPPFMTPESSLEFYSPEACRSMKLMYKESGVFEGIP 297
G + +W S C+MINGT +PPF+ L+F+S + CRS+ +++ +GIP
Sbjct: 231 KGKRNLSYWES-HCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIP 289
Query: 298 TYRFVAPKTLFANGSIYPPNEGFCP-------CLESGIQNVSTCRFSAPLFLSHPHFLNA 350
YRFV P FA+ P N FC C G+ ++S C+ P+++S PHFL A
Sbjct: 290 VYRFVLPSKAFASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYA 349
Query: 351 DPVLAEAVTGLHPNQEAHSLFLDIHPVTGIPMNCSVKLQLSLYMKSVAGIGQTGKIE-PV 409
P ++E + GL+PN+E H +LDI P+TG + + +LQ++L +K I ++
Sbjct: 350 SPDVSEPIDGLNPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNY 409
Query: 410 VLPLLWFAESGAMEGETLHTFYTQLVLMPKVMHYAQYVLLALGCVLLLVPVI--CQIRSQ 467
++P+LW E+G + E + F +Q+ ++ + +LL++G V+ + +I C RS+
Sbjct: 410 IVPILWLNETGTIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSK 469
>gi|48375178 CD36 antigen [Homo sapiens]
Length = 472
Score = 274 bits (700), Expect = 2e-73
Identities = 156/480 (32%), Positives = 261/480 (54%), Gaps = 24/480 (5%)
Query: 1 MGCSAKARWAAGALGVAGLLCAVLGAVMIVMVPSLIKQQVLKNVRIDPSSLSFNMWKEIP 60
MGC AGA V G + AV G +++ + LI++ + K V ++ +++F W +
Sbjct: 1 MGCDRNCGLIAGA--VIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTG 58
Query: 61 IPFYLSVYFFDVMNPSEILKGEKP-QVRERGPYVYR-EFRHKSNITFNNND-TVSFLEYR 117
Y + FDV NP E++ QV++RGPY YR F K N+T + D TVSFL+
Sbjct: 59 TEVYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPN 118
Query: 118 TFQFQPSKSHGSESDYIVMPNILVLGAAVMMENKPMTLKLIMTLAFTTLGERAFMNRTVG 177
F+PS S G+E+D + N+ V A+ + +N+ +++I+ F RT+
Sbjct: 119 GAIFEPSLSVGTEADNFTVLNLAVAAASHIYQNQ--FVQMILNSLINKSKSSMFQVRTLR 176
Query: 178 EIMWGYKDPLVNLINKYFPGMFPFKDKFGLFAELNNSDSGLFTVFTGVQNISRIHLVDKW 237
E++WGY+DP ++L+ +P GLF NN+ G++ VF G NIS++ ++D +
Sbjct: 177 ELLWGYRDPFLSLVP------YPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTY 230
Query: 238 NGLSKVDFWHSDQCNMINGTSGQMWPPFMTPESSLEFYSPEACRSMKLMYKESGVFEGIP 297
G + +W S C+MINGT +PPF+ L+F+S + CRS+ +++ +GIP
Sbjct: 231 KGKRNLSYWES-HCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIP 289
Query: 298 TYRFVAPKTLFANGSIYPPNEGFCP-------CLESGIQNVSTCRFSAPLFLSHPHFLNA 350
YRFV P FA+ P N FC C G+ ++S C+ P+++S PHFL A
Sbjct: 290 VYRFVLPSKAFASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYA 349
Query: 351 DPVLAEAVTGLHPNQEAHSLFLDIHPVTGIPMNCSVKLQLSLYMKSVAGIGQTGKIE-PV 409
P ++E + GL+PN+E H +LDI P+TG + + +LQ++L +K I ++
Sbjct: 350 SPDVSEPIDGLNPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNY 409
Query: 410 VLPLLWFAESGAMEGETLHTFYTQLVLMPKVMHYAQYVLLALGCVLLLVPVI--CQIRSQ 467
++P+LW E+G + E + F +Q+ ++ + +LL++G V+ + +I C RS+
Sbjct: 410 IVPILWLNETGTIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSK 469
>gi|48375176 CD36 antigen [Homo sapiens]
Length = 472
Score = 274 bits (700), Expect = 2e-73
Identities = 156/480 (32%), Positives = 261/480 (54%), Gaps = 24/480 (5%)
Query: 1 MGCSAKARWAAGALGVAGLLCAVLGAVMIVMVPSLIKQQVLKNVRIDPSSLSFNMWKEIP 60
MGC AGA V G + AV G +++ + LI++ + K V ++ +++F W +
Sbjct: 1 MGCDRNCGLIAGA--VIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTG 58
Query: 61 IPFYLSVYFFDVMNPSEILKGEKP-QVRERGPYVYR-EFRHKSNITFNNND-TVSFLEYR 117
Y + FDV NP E++ QV++RGPY YR F K N+T + D TVSFL+
Sbjct: 59 TEVYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPN 118
Query: 118 TFQFQPSKSHGSESDYIVMPNILVLGAAVMMENKPMTLKLIMTLAFTTLGERAFMNRTVG 177
F+PS S G+E+D + N+ V A+ + +N+ +++I+ F RT+
Sbjct: 119 GAIFEPSLSVGTEADNFTVLNLAVAAASHIYQNQ--FVQMILNSLINKSKSSMFQVRTLR 176
Query: 178 EIMWGYKDPLVNLINKYFPGMFPFKDKFGLFAELNNSDSGLFTVFTGVQNISRIHLVDKW 237
E++WGY+DP ++L+ +P GLF NN+ G++ VF G NIS++ ++D +
Sbjct: 177 ELLWGYRDPFLSLVP------YPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTY 230
Query: 238 NGLSKVDFWHSDQCNMINGTSGQMWPPFMTPESSLEFYSPEACRSMKLMYKESGVFEGIP 297
G + +W S C+MINGT +PPF+ L+F+S + CRS+ +++ +GIP
Sbjct: 231 KGKRNLSYWES-HCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIP 289
Query: 298 TYRFVAPKTLFANGSIYPPNEGFCP-------CLESGIQNVSTCRFSAPLFLSHPHFLNA 350
YRFV P FA+ P N FC C G+ ++S C+ P+++S PHFL A
Sbjct: 290 VYRFVLPSKAFASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYA 349
Query: 351 DPVLAEAVTGLHPNQEAHSLFLDIHPVTGIPMNCSVKLQLSLYMKSVAGIGQTGKIE-PV 409
P ++E + GL+PN+E H +LDI P+TG + + +LQ++L +K I ++
Sbjct: 350 SPDVSEPIDGLNPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNY 409
Query: 410 VLPLLWFAESGAMEGETLHTFYTQLVLMPKVMHYAQYVLLALGCVLLLVPVI--CQIRSQ 467
++P+LW E+G + E + F +Q+ ++ + +LL++G V+ + +I C RS+
Sbjct: 410 IVPILWLNETGTIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSK 469
>gi|48375180 CD36 antigen [Homo sapiens]
Length = 472
Score = 274 bits (700), Expect = 2e-73
Identities = 156/480 (32%), Positives = 261/480 (54%), Gaps = 24/480 (5%)
Query: 1 MGCSAKARWAAGALGVAGLLCAVLGAVMIVMVPSLIKQQVLKNVRIDPSSLSFNMWKEIP 60
MGC AGA V G + AV G +++ + LI++ + K V ++ +++F W +
Sbjct: 1 MGCDRNCGLIAGA--VIGAVLAVFGGILMPVGDLLIQKTIKKQVVLEEGTIAFKNWVKTG 58
Query: 61 IPFYLSVYFFDVMNPSEILKGEKP-QVRERGPYVYR-EFRHKSNITFNNND-TVSFLEYR 117
Y + FDV NP E++ QV++RGPY YR F K N+T + D TVSFL+
Sbjct: 59 TEVYRQFWIFDVQNPQEVMMNSSNIQVKQRGPYTYRVRFLAKENVTQDAEDNTVSFLQPN 118
Query: 118 TFQFQPSKSHGSESDYIVMPNILVLGAAVMMENKPMTLKLIMTLAFTTLGERAFMNRTVG 177
F+PS S G+E+D + N+ V A+ + +N+ +++I+ F RT+
Sbjct: 119 GAIFEPSLSVGTEADNFTVLNLAVAAASHIYQNQ--FVQMILNSLINKSKSSMFQVRTLR 176
Query: 178 EIMWGYKDPLVNLINKYFPGMFPFKDKFGLFAELNNSDSGLFTVFTGVQNISRIHLVDKW 237
E++WGY+DP ++L+ +P GLF NN+ G++ VF G NIS++ ++D +
Sbjct: 177 ELLWGYRDPFLSLVP------YPVTTTVGLFYPYNNTADGVYKVFNGKDNISKVAIIDTY 230
Query: 238 NGLSKVDFWHSDQCNMINGTSGQMWPPFMTPESSLEFYSPEACRSMKLMYKESGVFEGIP 297
G + +W S C+MINGT +PPF+ L+F+S + CRS+ +++ +GIP
Sbjct: 231 KGKRNLSYWES-HCDMINGTDAASFPPFVEKSQVLQFFSSDICRSIYAVFESDVNLKGIP 289
Query: 298 TYRFVAPKTLFANGSIYPPNEGFCP-------CLESGIQNVSTCRFSAPLFLSHPHFLNA 350
YRFV P FA+ P N FC C G+ ++S C+ P+++S PHFL A
Sbjct: 290 VYRFVLPSKAFASPVENPDNYCFCTEKIISKNCTSYGVLDISKCKEGRPVYISLPHFLYA 349
Query: 351 DPVLAEAVTGLHPNQEAHSLFLDIHPVTGIPMNCSVKLQLSLYMKSVAGIGQTGKIE-PV 409
P ++E + GL+PN+E H +LDI P+TG + + +LQ++L +K I ++
Sbjct: 350 SPDVSEPIDGLNPNEEEHRTYLDIEPITGFTLQFAKRLQVNLLVKPSEKIQVLKNLKRNY 409
Query: 410 VLPLLWFAESGAMEGETLHTFYTQLVLMPKVMHYAQYVLLALGCVLLLVPVI--CQIRSQ 467
++P+LW E+G + E + F +Q+ ++ + +LL++G V+ + +I C RS+
Sbjct: 410 IVPILWLNETGTIGDEKANMFRSQVTGKINLLGLIEMILLSVGVVMFVAFMISYCACRSK 469
>gi|194272142 myosin IXB isoform 2 [Homo sapiens]
Length = 2022
Score = 33.9 bits (76), Expect = 0.36
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 463 QIRSQGPEDTVSQPGLAAGPDRPPSPYTPLLPDSPSGQPPSP 504
Q+ QGPE LA+ P+ PS +PL SP + PSP
Sbjct: 1082 QVAEQGPEPAEDGGHLASEPEVQPSDRSPLEHSSPEKEAPSP 1123
>gi|33356170 myosin IXB isoform 1 [Homo sapiens]
Length = 2157
Score = 33.9 bits (76), Expect = 0.36
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 463 QIRSQGPEDTVSQPGLAAGPDRPPSPYTPLLPDSPSGQPPSP 504
Q+ QGPE LA+ P+ PS +PL SP + PSP
Sbjct: 1082 QVAEQGPEPAEDGGHLASEPEVQPSDRSPLEHSSPEKEAPSP 1123
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 33.5 bits (75), Expect = 0.47
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 469 PEDTVSQPGLAAGPDRPPSPYTPLLPDSPSGQPPSPTA 506
P + + PGLAA P+RP + P P QPP P +
Sbjct: 139 PGEDRTPPGLAAEPERPGASAQPAASPPPPQQPPQPAS 176
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 33.1 bits (74), Expect = 0.61
Identities = 23/53 (43%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 457 LVPVICQIRSQGP---EDTVSQPGLAAGPDRPPSPYTPLLPDSPSGQPPSPTA 506
L P Q S GP +TVS P L A P PP P P P P PP P+A
Sbjct: 1967 LPPAPPQPSSMGPVKIPNTVSTP-LQAPPPTPPPPPPPPPPPPPPPPPPPPSA 2018
>gi|158534059 formin binding protein 4 [Homo sapiens]
Length = 1017
Score = 32.3 bits (72), Expect = 1.0
Identities = 35/113 (30%), Positives = 44/113 (38%), Gaps = 15/113 (13%)
Query: 398 AGIGQ--TG---KIEPVVLPLLWFAESGAMEGETLHTFYTQLVLMPKVMHYAQYVLLALG 452
AGIG TG + PV LP G +L + Y L P +M YA+ +
Sbjct: 826 AGIGNQATGIGHQTIPVSLPAAGMGHQA--RGMSLQSNYLGLAAAPAIMSYAECSVPIGV 883
Query: 453 CVLLLVPVICQIRSQGPEDTVSQPGLAAGPDRPPSPYTPLLPDSPSGQPPSPT 505
L PV Q R P T+ +P PP P P P +P PP T
Sbjct: 884 TAPSLQPV--QARGAVPTATIIEP------PPPPPPPPPPPPPAPKMPPPEKT 928
>gi|114155127 regulator of G-protein signalling 3 isoform 6 [Homo
sapiens]
Length = 1198
Score = 31.6 bits (70), Expect = 1.8
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 465 RSQGPEDTVSQPGLAAGPDRPPSPYTPLLPDSPSGQPPSPT 505
+ G ED+ + G + PP P DSPSGQ P+P+
Sbjct: 697 KGPGAEDSPPSKEPSPGQELPPGQDLPPNKDSPSGQEPAPS 737
>gi|10864075 regulator of G-protein signalling 3 isoform 2 [Homo
sapiens]
Length = 519
Score = 31.6 bits (70), Expect = 1.8
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 465 RSQGPEDTVSQPGLAAGPDRPPSPYTPLLPDSPSGQPPSPT 505
+ G ED+ + G + PP P DSPSGQ P+P+
Sbjct: 18 KGPGAEDSPPSKEPSPGQELPPGQDLPPNKDSPSGQEPAPS 58
>gi|62865651 regulator of G-protein signalling 3 isoform 1 [Homo
sapiens]
Length = 917
Score = 31.6 bits (70), Expect = 1.8
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 465 RSQGPEDTVSQPGLAAGPDRPPSPYTPLLPDSPSGQPPSPT 505
+ G ED+ + G + PP P DSPSGQ P+P+
Sbjct: 416 KGPGAEDSPPSKEPSPGQELPPGQDLPPNKDSPSGQEPAPS 456
>gi|169167066 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 31.6 bits (70), Expect = 1.8
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 466 SQGPEDTVSQPGLAAGPDRPPSPYTPLLPDSPSGQPPSP 504
+Q P + PG P PP P TP P P PP P
Sbjct: 17 AQPPSSADTVPGTTYPPPPPPPPPTPRPPPPPPLPPPGP 55
>gi|113416187 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 31.6 bits (70), Expect = 1.8
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 466 SQGPEDTVSQPGLAAGPDRPPSPYTPLLPDSPSGQPPSP 504
+Q P + PG P PP P TP P P PP P
Sbjct: 17 AQPPSSADTVPGTTYPPPPPPPPPTPRPPPPPPLPPPGP 55
>gi|113415691 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 31.6 bits (70), Expect = 1.8
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 466 SQGPEDTVSQPGLAAGPDRPPSPYTPLLPDSPSGQPPSP 504
+Q P + PG P PP P TP P P PP P
Sbjct: 17 AQPPSSADTVPGTTYPPPPPPPPPTPRPPPPPPLPPPGP 55
>gi|32481209 mitogen-activated protein kinase-activated protein
kinase 2 isoform 2 [Homo sapiens]
Length = 400
Score = 31.6 bits (70), Expect = 1.8
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 466 SQGPEDTVSQPGLAAGPDRPPSPYTPLLPDSPSGQPPSP 504
SQG V P P PP P TP LP P+ PP P
Sbjct: 5 SQGQSPPVPFPA----PAPPPQPPTPALPHPPAQPPPPP 39
>gi|10863901 mitogen-activated protein kinase-activated protein
kinase 2 isoform 1 [Homo sapiens]
Length = 370
Score = 31.6 bits (70), Expect = 1.8
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Query: 466 SQGPEDTVSQPGLAAGPDRPPSPYTPLLPDSPSGQPPSP 504
SQG V P P PP P TP LP P+ PP P
Sbjct: 5 SQGQSPPVPFPA----PAPPPQPPTPALPHPPAQPPPPP 39
>gi|62177127 myosin heavy chain Myr 8 [Homo sapiens]
Length = 1858
Score = 31.6 bits (70), Expect = 1.8
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 467 QGPEDTVSQPGLAA--GPDRPPSPYTPLLPDSPSGQPPSP 504
+G D + PGLA G R P TP P P G PP+P
Sbjct: 1547 KGDGDRPASPGLALFNGSGRASPPSTPPPPPPPPGPPPAP 1586
>gi|46909594 a disintegrin and metalloproteinase domain 15 isoform 3
preproprotein [Homo sapiens]
Length = 839
Score = 31.2 bits (69), Expect = 2.3
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 469 PEDTVSQPGLAAGPDRPPSPYTPLLPD----SPSGQPPSPTA 506
P D VS+ + GP +PP P PL D PSG P P A
Sbjct: 775 PPDPVSKRLQSQGPAKPPPPRKPLPADPQGRCPSGDLPGPGA 816
>gi|44662836 breast cancer anti-estrogen resistance 1 [Homo sapiens]
Length = 870
Score = 31.2 bits (69), Expect = 2.3
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 468 GPEDTVSQP--GLAAGPDRPPSPYTPLLPDSPSGQPPS 503
GP T +QP GL A P P S YTP+LP++ QP S
Sbjct: 77 GPPATPAQPQPGLHA-PAPPASQYTPMLPNTYQPQPDS 113
>gi|239756225 PREDICTED: similar to breast cancer anti-estrogen
resistance 1 [Homo sapiens]
Length = 232
Score = 30.8 bits (68), Expect = 3.0
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 468 GPEDTVSQP--GLAAGPDRPPSPYTPLLPDSPSGQPPS 503
GP T +QP GL A P P S YTP+LP++ QP S
Sbjct: 77 GPPATPAQPQPGLHA-PVPPASQYTPMLPNTYQPQPDS 113
>gi|239750776 PREDICTED: similar to breast cancer anti-estrogen
resistance 1 [Homo sapiens]
Length = 224
Score = 30.8 bits (68), Expect = 3.0
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 468 GPEDTVSQP--GLAAGPDRPPSPYTPLLPDSPSGQPPS 503
GP T +QP GL A P P S YTP+LP++ QP S
Sbjct: 77 GPPATPAQPQPGLHA-PVPPASQYTPMLPNTYQPQPDS 113
>gi|239745060 PREDICTED: similar to breast cancer anti-estrogen
resistance 1 [Homo sapiens]
Length = 353
Score = 30.8 bits (68), Expect = 3.0
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 468 GPEDTVSQP--GLAAGPDRPPSPYTPLLPDSPSGQPPS 503
GP T +QP GL A P P S YTP+LP++ QP S
Sbjct: 77 GPPATPAQPQPGLHA-PVPPASQYTPMLPNTYQPQPDS 113
>gi|239745044 PREDICTED: similar to breast cancer anti-estrogen
resistance 1 [Homo sapiens]
Length = 368
Score = 30.8 bits (68), Expect = 3.0
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 468 GPEDTVSQP--GLAAGPDRPPSPYTPLLPDSPSGQPPS 503
GP T +QP GL A P P S YTP+LP++ QP S
Sbjct: 77 GPPATPAQPQPGLHA-PVPPASQYTPMLPNTYQPQPDS 113
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 30.8 bits (68), Expect = 3.0
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Query: 471 DTVSQPGLAAGPDRPPSPYTPLLPDSPSGQPPSPT 505
D+ S GL+ GP RP P PL P SP QPP T
Sbjct: 144 DSDSSSGLSQGPARPYHP-PPLFPPSP--QPPDST 175
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 30.8 bits (68), Expect = 3.0
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Query: 471 DTVSQPGLAAGPDRPPSPYTPLLPDSPSGQPPSPT 505
D+ S GL+ GP RP P PL P SP QPP T
Sbjct: 144 DSDSSSGLSQGPARPYHP-PPLFPPSP--QPPDST 175
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.138 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,759,507
Number of Sequences: 37866
Number of extensions: 983706
Number of successful extensions: 4784
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 4598
Number of HSP's gapped (non-prelim): 164
length of query: 506
length of database: 18,247,518
effective HSP length: 107
effective length of query: 399
effective length of database: 14,195,856
effective search space: 5664146544
effective search space used: 5664146544
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.